0s autopkgtest [13:54:18]: starting date and time: 2024-03-16 13:54:18+0000 0s autopkgtest [13:54:18]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [13:54:18]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.hhv962xh/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-rcurl,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-genomicfeatures --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-rcurl/1.98-1.14+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-10.secgroup --name adt-noble-arm64-r-bioc-genomicfeatures-20240316-135418-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 62s autopkgtest [13:55:20]: testbed dpkg architecture: arm64 62s autopkgtest [13:55:20]: testbed apt version: 2.7.12 62s autopkgtest [13:55:20]: @@@@@@@@@@@@@@@@@@@@ test bed setup 63s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 63s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 63s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 63s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 63s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3690 kB] 63s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 63s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 63s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 63s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 64s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4006 kB] 64s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 64s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.8 kB] 64s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 66s Fetched 9092 kB in 2s (5049 kB/s) 66s Reading package lists... 69s Reading package lists... 70s Building dependency tree... 70s Reading state information... 71s Calculating upgrade... 71s The following packages will be REMOVED: 71s libssl3 71s The following NEW packages will be installed: 71s libssl3t64 71s The following packages have been kept back: 71s curl 71s The following packages will be upgraded: 71s openssl ubuntu-minimal ubuntu-standard 72s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 72s Need to get 2775 kB of archives. 72s After this operation, 72.7 kB of additional disk space will be used. 72s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 72s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 72s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 72s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 73s Fetched 2775 kB in 1s (3635 kB/s) 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 73s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 73s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 73s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 73s wget depends on libssl3 (>= 3.0.0). 73s u-boot-tools depends on libssl3 (>= 3.0.0). 73s tnftp depends on libssl3 (>= 3.0.0). 73s tcpdump depends on libssl3 (>= 3.0.0). 73s systemd-resolved depends on libssl3 (>= 3.0.0). 73s systemd depends on libssl3 (>= 3.0.0). 73s sudo depends on libssl3 (>= 3.0.0). 73s sbsigntool depends on libssl3 (>= 3.0.0). 73s rsync depends on libssl3 (>= 3.0.0). 73s python3-cryptography depends on libssl3 (>= 3.0.0). 73s openssh-server depends on libssl3 (>= 3.0.10). 73s openssh-client depends on libssl3 (>= 3.0.10). 73s mtd-utils depends on libssl3 (>= 3.0.0). 73s mokutil depends on libssl3 (>= 3.0.0). 73s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 73s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 73s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 73s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 73s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 73s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 73s libnvme1 depends on libssl3 (>= 3.0.0). 73s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 73s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 73s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 73s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 73s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 73s kmod depends on libssl3 (>= 3.0.0). 73s dhcpcd-base depends on libssl3 (>= 3.0.0). 73s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 73s 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 73s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 73s Selecting previously unselected package libssl3t64:arm64. 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 73s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 73s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 73s Preparing to unpack .../ubuntu-minimal_1.536_arm64.deb ... 73s Unpacking ubuntu-minimal (1.536) over (1.535) ... 74s Preparing to unpack .../ubuntu-standard_1.536_arm64.deb ... 74s Unpacking ubuntu-standard (1.536) over (1.535) ... 74s Setting up ubuntu-minimal (1.536) ... 74s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 74s Setting up ubuntu-standard (1.536) ... 74s Setting up openssl (3.0.13-0ubuntu1) ... 74s Processing triggers for man-db (2.12.0-3) ... 74s Processing triggers for libc-bin (2.39-0ubuntu2) ... 75s Reading package lists... 75s Building dependency tree... 75s Reading state information... 76s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 77s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 77s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 77s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 77s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 79s Reading package lists... 79s Reading package lists... 79s Building dependency tree... 79s Reading state information... 80s Calculating upgrade... 80s The following packages have been kept back: 80s curl 80s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 80s Reading package lists... 81s Building dependency tree... 81s Reading state information... 81s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 84s autopkgtest [13:55:42]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 85s autopkgtest [13:55:43]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-genomicfeatures 86s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-genomicfeatures 1.54.1+dfsg-1 (dsc) [2513 B] 86s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-genomicfeatures 1.54.1+dfsg-1 (tar) [572 kB] 86s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-genomicfeatures 1.54.1+dfsg-1 (diff) [13.0 kB] 87s gpgv: Signature made Fri Dec 1 02:52:50 2023 UTC 87s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 87s gpgv: issuer "plessy@debian.org" 87s gpgv: Can't check signature: No public key 87s dpkg-source: warning: cannot verify inline signature for ./r-bioc-genomicfeatures_1.54.1+dfsg-1.dsc: no acceptable signature found 87s autopkgtest [13:55:45]: testing package r-bioc-genomicfeatures version 1.54.1+dfsg-1 87s autopkgtest [13:55:45]: build not needed 90s autopkgtest [13:55:48]: test pkg-r-autopkgtest: preparing testbed 91s Reading package lists... 92s Building dependency tree... 92s Reading state information... 93s Starting pkgProblemResolver with broken count: 0 93s Starting 2 pkgProblemResolver with broken count: 0 93s Done 93s The following additional packages will be installed: 93s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 93s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 93s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 93s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 93s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 93s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 93s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 93s libatomic1 libbibtex-parser-perl libblas-dev libblas3 libboost-dev 93s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 93s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 93s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 93s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 93s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 93s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 93s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 93s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 93s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 93s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 93s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 93s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 93s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 93s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 93s libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libsharpyuv0 libsm6 93s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 93s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 93s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 93s libxss1 libxt6 libzzip-0-13 linux-libc-dev node-bootstrap-sass 93s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 93s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 93s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase 93s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 93s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome 93s r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 93s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 93s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 93s r-bioc-org.hs.eg.db r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools 93s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 93s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 93s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 93s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 93s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 93s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-digest 93s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 93s r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 93s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 93s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 93s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later 93s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 93s r-cran-magrittr r-cran-markdown r-cran-matrix r-cran-matrixstats 93s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgconfig 93s r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits r-cran-progress 93s r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcpp 93s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 93s r-cran-rsqlite r-cran-runit r-cran-sass r-cran-shiny r-cran-snow 93s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble 93s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs 93s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 93s rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 93s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 93s zlib1g-dev 93s Suggested packages: 93s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 93s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 93s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 93s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 93s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 93s libboost-context1.83-dev libboost-contract1.83-dev 93s libboost-coroutine1.83-dev libboost-date-time1.83-dev 93s libboost-exception1.83-dev libboost-fiber1.83-dev 93s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 93s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 93s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 93s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 93s libboost-numpy1.83-dev libboost-program-options1.83-dev 93s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 93s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 93s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 93s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 93s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 93s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 93s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 93s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 93s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 93s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 93s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 93s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 93s r-bioc-go.db r-bioc-graph r-cran-testthat r-bioc-all r-bioc-affy 93s r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 93s r-bioc-variantannotation r-bioc-shortread r-cran-batchtools 93s r-cran-data.table r-cran-mockery r-cran-webmockr r-bioc-hdf5array 93s r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats r-bioc-ggbio 93s r-bioc-gviz r-bioc-annotationhub r-cran-r.utils r-bioc-edger r-bioc-dexseq 93s r-bioc-sparsematrixstats r-bioc-limma r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff 93s r-cran-covr r-cran-rstudioapi r-cran-rmysql r-cran-lubridate r-cran-getopt 93s r-cran-formattable r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins 93s r-cran-scales r-cran-survival r-cran-units r-cran-vdiffr r-cran-inline 93s r-cran-rmpi r-cran-rlecuyer r-cran-spelling r-cran-bench r-cran-brio 93s r-cran-callr r-cran-here r-cran-pkgbuild r-cran-pkgload r-cran-plm 93s r-cran-zoo debhelper ghostscript gv | postscript-viewer perl-tk xpdf 93s | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc 93s wp2latex 93s Recommended packages: 93s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 93s r-recommended r-doc-html r-cran-testthat r-bioc-biocversion r-cran-remotes 93s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 93s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot r-cran-ggplot2 93s r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery r-cran-processx 93s r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench r-cran-brio 93s r-cran-decor r-cran-desc r-cran-lobstr r-cran-scales r-cran-spelling 93s r-cran-webutils r-cran-rpostgresql r-cran-broom r-cran-rmysql 93s r-cran-unitizer r-cran-rsvg r-cran-survival r-cran-pkgload r-cran-waldo 93s r-cran-cairo r-cran-ragg r-cran-jpeg r-cran-readr r-cran-r.rsp r-cran-sf 93s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 93s r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse 93s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-future r-cran-usethis 93s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 93s r-cran-data.table r-cran-mockr r-cran-formattable r-cran-pkgdown 93s r-cran-zeallot r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl 93s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 94s The following packages will be REMOVED: 94s libcurl4 libpsl5 94s The following NEW packages will be installed: 94s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 94s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 94s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 94s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 94s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 94s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 94s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 94s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 94s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 94s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 94s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 94s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl 94s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 94s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 94s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 94s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 94s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 94s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 94s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 94s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 94s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 94s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 94s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 libptexenc1 94s libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 94s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 94s libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 94s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 94s linux-libc-dev node-bootstrap-sass node-html5shiv node-normalize.css pandoc 94s pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 94s r-base-dev r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase 94s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 94s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome 94s r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 94s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 94s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 94s r-bioc-org.hs.eg.db r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools 94s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 94s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 94s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 94s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 94s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 94s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-digest 94s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 94s r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 94s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 94s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 94s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later 94s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 94s r-cran-magrittr r-cran-markdown r-cran-matrix r-cran-matrixstats 94s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgconfig 94s r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits r-cran-progress 94s r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcpp 94s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 94s r-cran-rsqlite r-cran-runit r-cran-sass r-cran-shiny r-cran-snow 94s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble 94s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs 94s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 94s rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 94s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 94s zlib1g-dev 94s The following packages will be upgraded: 94s curl 94s 1 upgraded, 284 newly installed, 2 to remove and 0 not upgraded. 94s Need to get 489 MB/489 MB of archives. 94s After this operation, 1729 MB of additional disk space will be used. 94s Get:1 /tmp/autopkgtest.oPlngt/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [832 B] 94s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 94s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 94s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 94s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 94s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 94s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 94s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 94s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 94s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 94s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 94s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 94s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 94s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 95s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 95s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 95s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 95s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 95s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 95s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 95s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 95s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 95s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 95s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 95s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 95s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 95s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 95s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 96s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 96s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 96s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 96s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 96s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 96s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 96s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 96s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 96s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 96s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 96s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 96s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 96s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 96s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 96s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 96s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 96s Get:45 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 96s Get:46 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 96s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 96s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 96s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 96s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 96s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 96s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 96s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 96s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 96s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 96s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 96s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 96s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 96s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 96s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 96s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 97s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 97s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 97s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 97s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 97s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 97s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 97s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 97s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 97s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 97s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 97s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 97s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 97s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 97s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 97s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 97s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 97s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 97s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 97s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 97s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 97s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 97s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 97s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 97s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 97s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 97s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 97s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 97s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 97s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 97s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 97s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 97s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 97s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 97s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 97s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 97s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 97s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 97s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 97s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 97s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 97s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 98s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 98s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 98s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 98s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 98s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 98s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 98s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 98s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 98s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 98s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 98s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 98s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 98s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB] 98s Get:116 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 98s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 98s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB] 98s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 98s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 98s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 98s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 98s Get:123 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 98s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 98s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 98s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 98s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 98s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 98s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 98s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 98s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 98s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 98s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 98s Get:134 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 98s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 98s Get:136 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 98s Get:137 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 98s Get:138 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 98s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 98s Get:140 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 98s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 99s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 99s Get:143 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 99s Get:144 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 99s Get:145 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 99s Get:146 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 99s Get:147 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 99s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 100s Get:149 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 100s Get:150 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B] 100s Get:151 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 100s Get:152 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 100s Get:153 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 100s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 100s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 100s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 100s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 100s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 100s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 100s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 100s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 100s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 100s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 100s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 100s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 100s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 100s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 100s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 100s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 100s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 100s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 100s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 100s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 100s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 100s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 100s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 100s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 100s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 100s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 100s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 100s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 100s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 100s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 100s Get:184 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1build1 [793 kB] 100s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 101s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 101s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 101s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 101s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 101s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 101s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 101s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 101s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationfilter all 1.26.0+dfsg-1 [239 kB] 101s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 101s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 101s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 101s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 101s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 101s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 101s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 101s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 101s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 101s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 101s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 102s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 102s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 102s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 102s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 102s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 102s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 102s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 102s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 102s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 102s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 102s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 102s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 102s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 102s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 102s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 102s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 102s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 102s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 102s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 102s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 102s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 102s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 102s Get:227 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 102s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 102s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 102s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 102s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 102s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 102s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 102s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 102s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 102s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 102s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 102s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 102s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 103s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 103s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 103s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 103s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 103s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 103s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 103s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 103s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 103s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 103s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 103s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 103s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 103s Get:252 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 103s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 103s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 104s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 104s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 107s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 107s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 107s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 107s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 107s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 107s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml2 arm64 1.3.6-1 [321 kB] 107s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 107s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhtslib arm64 2.4.1+dfsg-1 [1357 kB] 107s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rsamtools arm64 2.18.0+dfsg-1 [3629 kB] 107s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 107s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 107s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 107s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 107s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 107s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 107s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 107s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 107s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 107s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicalignments arm64 1.38.2-1 [2133 kB] 107s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rjson arm64 0.2.21-1 [142 kB] 107s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 107s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rtracklayer arm64 1.62.0-1 [5104 kB] 107s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-bsgenome all 1.70.2-1 [6975 kB] 108s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 108s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-protgenerics all 1.34.0-1 [225 kB] 108s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-ensembldb all 2.26.0+dfsg-1 [1489 kB] 108s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-org.hs.eg.db all 3.18.0-1 [64.1 MB] 110s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-markdown all 1.12+dfsg-1 [179 kB] 110s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-runit all 0.4.32-3 [283 kB] 111s Preconfiguring packages ... 112s Fetched 489 MB in 16s (29.9 MB/s) 112s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 112s wget depends on libpsl5 (>= 0.16.0). 112s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 112s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 112s 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74760 files and directories currently installed.) 112s Removing libpsl5:arm64 (0.21.2-1build1) ... 112s Selecting previously unselected package libpsl5t64:arm64. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74755 files and directories currently installed.) 112s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 112s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 112s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 112s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74761 files and directories currently installed.) 112s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 112s Selecting previously unselected package libcurl4t64:arm64. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74756 files and directories currently installed.) 112s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 112s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 112s Selecting previously unselected package libc-dev-bin. 112s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 112s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 112s Selecting previously unselected package linux-libc-dev:arm64. 112s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 112s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 112s Selecting previously unselected package libcrypt-dev:arm64. 112s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 112s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 112s Selecting previously unselected package libtirpc-dev:arm64. 112s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 112s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 112s Selecting previously unselected package libnsl-dev:arm64. 113s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 113s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 113s Selecting previously unselected package rpcsvc-proto. 113s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 113s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 113s Selecting previously unselected package libc6-dev:arm64. 113s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 113s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 113s Selecting previously unselected package libisl23:arm64. 113s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 113s Unpacking libisl23:arm64 (0.26-3) ... 113s Selecting previously unselected package libmpc3:arm64. 113s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 113s Unpacking libmpc3:arm64 (1.3.1-1) ... 113s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 113s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 113s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 114s Selecting previously unselected package cpp-13. 114s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 114s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 114s Selecting previously unselected package cpp-aarch64-linux-gnu. 114s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 114s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 114s Selecting previously unselected package cpp. 114s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 114s Unpacking cpp (4:13.2.0-7ubuntu1) ... 114s Selecting previously unselected package libcc1-0:arm64. 114s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 114s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 114s Selecting previously unselected package libgomp1:arm64. 114s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 114s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 114s Selecting previously unselected package libitm1:arm64. 114s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 114s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 114s Selecting previously unselected package libatomic1:arm64. 114s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 114s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 114s Selecting previously unselected package libasan8:arm64. 114s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 114s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 114s Selecting previously unselected package liblsan0:arm64. 114s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 114s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 114s Selecting previously unselected package libtsan2:arm64. 114s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 114s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 114s Selecting previously unselected package libubsan1:arm64. 114s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 114s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 115s Selecting previously unselected package libhwasan0:arm64. 115s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 115s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 115s Selecting previously unselected package libgcc-13-dev:arm64. 115s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 115s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 115s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 115s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 115s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 115s Selecting previously unselected package gcc-13. 115s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 115s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 115s Selecting previously unselected package gcc-aarch64-linux-gnu. 115s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 115s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 115s Selecting previously unselected package gcc. 115s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 115s Unpacking gcc (4:13.2.0-7ubuntu1) ... 115s Selecting previously unselected package libstdc++-13-dev:arm64. 115s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 115s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 116s Selecting previously unselected package g++-13-aarch64-linux-gnu. 116s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 116s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 116s Selecting previously unselected package g++-13. 116s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 116s Unpacking g++-13 (13.2.0-17ubuntu2) ... 116s Selecting previously unselected package g++-aarch64-linux-gnu. 116s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 116s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 116s Selecting previously unselected package g++. 116s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 116s Unpacking g++ (4:13.2.0-7ubuntu1) ... 116s Selecting previously unselected package build-essential. 116s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 116s Unpacking build-essential (12.10ubuntu1) ... 116s Selecting previously unselected package dctrl-tools. 116s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 116s Unpacking dctrl-tools (2.24-3build2) ... 116s Selecting previously unselected package fonts-dejavu-mono. 116s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 116s Unpacking fonts-dejavu-mono (2.37-8) ... 116s Selecting previously unselected package fonts-dejavu-core. 116s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 116s Unpacking fonts-dejavu-core (2.37-8) ... 116s Selecting previously unselected package fontconfig-config. 116s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 116s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 116s Selecting previously unselected package libfontconfig1:arm64. 116s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 116s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 117s Selecting previously unselected package fontconfig. 117s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 117s Unpacking fontconfig (2.15.0-1ubuntu1) ... 117s Selecting previously unselected package fonts-font-awesome. 117s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 117s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 117s Selecting previously unselected package fonts-glyphicons-halflings. 117s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 117s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 117s Selecting previously unselected package fonts-lmodern. 117s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 117s Unpacking fonts-lmodern (2.005-1) ... 117s Selecting previously unselected package fonts-mathjax. 117s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 117s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 117s Selecting previously unselected package libgfortran5:arm64. 117s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 117s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 117s Selecting previously unselected package libgfortran-13-dev:arm64. 117s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 117s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 117s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 117s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 117s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 117s Selecting previously unselected package gfortran-13. 117s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 117s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 117s Selecting previously unselected package gfortran-aarch64-linux-gnu. 117s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 117s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 117s Selecting previously unselected package gfortran. 118s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 118s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 118s Selecting previously unselected package icu-devtools. 118s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_arm64.deb ... 118s Unpacking icu-devtools (74.2-1ubuntu1) ... 118s Selecting previously unselected package javascript-common. 118s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 118s Unpacking javascript-common (11+nmu1) ... 118s Selecting previously unselected package libio-string-perl. 118s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 118s Unpacking libio-string-perl (1.08-4) ... 118s Selecting previously unselected package liblatex-tounicode-perl. 118s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 118s Unpacking liblatex-tounicode-perl (0.54-2) ... 118s Selecting previously unselected package libbibtex-parser-perl. 118s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 118s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 118s Selecting previously unselected package libblas3:arm64. 118s Preparing to unpack .../055-libblas3_3.12.0-3_arm64.deb ... 118s Unpacking libblas3:arm64 (3.12.0-3) ... 118s Selecting previously unselected package libblas-dev:arm64. 118s Preparing to unpack .../056-libblas-dev_3.12.0-3_arm64.deb ... 118s Unpacking libblas-dev:arm64 (3.12.0-3) ... 118s Selecting previously unselected package libboost1.83-dev:arm64. 118s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_arm64.deb ... 118s Unpacking libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 120s Selecting previously unselected package libboost-dev:arm64. 120s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_arm64.deb ... 120s Unpacking libboost-dev:arm64 (1.83.0.1ubuntu2) ... 120s Selecting previously unselected package libbz2-dev:arm64. 120s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 120s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 120s Selecting previously unselected package libpixman-1-0:arm64. 120s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_arm64.deb ... 120s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 120s Selecting previously unselected package libxcb-render0:arm64. 120s Preparing to unpack .../061-libxcb-render0_1.15-1_arm64.deb ... 120s Unpacking libxcb-render0:arm64 (1.15-1) ... 120s Selecting previously unselected package libxcb-shm0:arm64. 121s Preparing to unpack .../062-libxcb-shm0_1.15-1_arm64.deb ... 121s Unpacking libxcb-shm0:arm64 (1.15-1) ... 121s Selecting previously unselected package libxrender1:arm64. 121s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 121s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 121s Selecting previously unselected package libcairo2:arm64. 121s Preparing to unpack .../064-libcairo2_1.18.0-1_arm64.deb ... 121s Unpacking libcairo2:arm64 (1.18.0-1) ... 121s Selecting previously unselected package libdatrie1:arm64. 121s Preparing to unpack .../065-libdatrie1_0.2.13-3_arm64.deb ... 121s Unpacking libdatrie1:arm64 (0.2.13-3) ... 121s Selecting previously unselected package libdeflate0:arm64. 121s Preparing to unpack .../066-libdeflate0_1.19-1_arm64.deb ... 121s Unpacking libdeflate0:arm64 (1.19-1) ... 121s Selecting previously unselected package libgraphite2-3:arm64. 121s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_arm64.deb ... 121s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 121s Selecting previously unselected package libharfbuzz0b:arm64. 121s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_arm64.deb ... 121s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 121s Selecting previously unselected package x11-common. 121s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 121s Unpacking x11-common (1:7.7+23ubuntu2) ... 121s Selecting previously unselected package libice6:arm64. 121s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_arm64.deb ... 121s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 121s Selecting previously unselected package libicu-dev:arm64. 121s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_arm64.deb ... 121s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 121s Selecting previously unselected package libjpeg-turbo8:arm64. 121s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 121s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 121s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 122s Preparing to unpack .../073-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 122s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 122s Selecting previously unselected package libjpeg8:arm64. 122s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_arm64.deb ... 122s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 122s Selecting previously unselected package libjpeg8-dev:arm64. 122s Preparing to unpack .../075-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 122s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 122s Selecting previously unselected package libjpeg-dev:arm64. 122s Preparing to unpack .../076-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 122s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 122s Selecting previously unselected package libjs-bootstrap. 122s Preparing to unpack .../077-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 122s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 122s Selecting previously unselected package libjs-popper.js. 122s Preparing to unpack .../078-libjs-popper.js_1.16.1+ds-6_all.deb ... 122s Unpacking libjs-popper.js (1.16.1+ds-6) ... 122s Selecting previously unselected package libjs-bootstrap4. 122s Preparing to unpack .../079-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 122s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 122s Selecting previously unselected package libjs-d3. 122s Preparing to unpack .../080-libjs-d3_3.5.17-4_all.deb ... 122s Unpacking libjs-d3 (3.5.17-4) ... 122s Selecting previously unselected package libjs-es5-shim. 122s Preparing to unpack .../081-libjs-es5-shim_4.6.7-2_all.deb ... 122s Unpacking libjs-es5-shim (4.6.7-2) ... 122s Selecting previously unselected package libjs-highlight.js. 122s Preparing to unpack .../082-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 122s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 122s Selecting previously unselected package libjs-jquery. 122s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 122s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 122s Selecting previously unselected package libjs-jquery-datatables. 122s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 122s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 122s Selecting previously unselected package libjs-sifter.js. 123s Preparing to unpack .../085-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 123s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 123s Selecting previously unselected package libjs-microplugin.js. 123s Preparing to unpack .../086-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 123s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 123s Selecting previously unselected package libjs-jquery-selectize.js. 123s Preparing to unpack .../087-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 123s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 123s Selecting previously unselected package libjs-jquery-ui. 123s Preparing to unpack .../088-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 123s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 123s Selecting previously unselected package libjs-json. 123s Preparing to unpack .../089-libjs-json_0~20221030+~1.0.8-1_all.deb ... 123s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 123s Selecting previously unselected package libjs-lunr. 123s Preparing to unpack .../090-libjs-lunr_2.3.9~dfsg-2_all.deb ... 123s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 123s Selecting previously unselected package libjs-prettify. 123s Preparing to unpack .../091-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 123s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 123s Selecting previously unselected package libkpathsea6:arm64. 123s Preparing to unpack .../092-libkpathsea6_2023.20230311.66589-9_arm64.deb ... 123s Unpacking libkpathsea6:arm64 (2023.20230311.66589-9) ... 123s Selecting previously unselected package liblapack3:arm64. 123s Preparing to unpack .../093-liblapack3_3.12.0-3_arm64.deb ... 123s Unpacking liblapack3:arm64 (3.12.0-3) ... 123s Selecting previously unselected package liblapack-dev:arm64. 123s Preparing to unpack .../094-liblapack-dev_3.12.0-3_arm64.deb ... 123s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 124s Selecting previously unselected package liblerc4:arm64. 124s Preparing to unpack .../095-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 124s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 124s Selecting previously unselected package liblua5.4-0:arm64. 124s Preparing to unpack .../096-liblua5.4-0_5.4.6-3_arm64.deb ... 124s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 124s Selecting previously unselected package libncurses-dev:arm64. 124s Preparing to unpack .../097-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 124s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 124s Selecting previously unselected package libthai-data. 124s Preparing to unpack .../098-libthai-data_0.1.29-2_all.deb ... 124s Unpacking libthai-data (0.1.29-2) ... 124s Selecting previously unselected package libthai0:arm64. 124s Preparing to unpack .../099-libthai0_0.1.29-2_arm64.deb ... 124s Unpacking libthai0:arm64 (0.1.29-2) ... 124s Selecting previously unselected package libpango-1.0-0:arm64. 124s Preparing to unpack .../100-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 124s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 124s Selecting previously unselected package libpangoft2-1.0-0:arm64. 124s Preparing to unpack .../101-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 124s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 124s Selecting previously unselected package libpangocairo-1.0-0:arm64. 124s Preparing to unpack .../102-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 124s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 124s Selecting previously unselected package libpaper1:arm64. 124s Preparing to unpack .../103-libpaper1_1.1.29_arm64.deb ... 124s Unpacking libpaper1:arm64 (1.1.29) ... 124s Selecting previously unselected package libpaper-utils. 124s Preparing to unpack .../104-libpaper-utils_1.1.29_arm64.deb ... 124s Unpacking libpaper-utils (1.1.29) ... 124s Selecting previously unselected package libpcre2-16-0:arm64. 124s Preparing to unpack .../105-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 124s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 124s Selecting previously unselected package libpcre2-32-0:arm64. 124s Preparing to unpack .../106-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 124s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 124s Selecting previously unselected package libpcre2-posix3:arm64. 124s Preparing to unpack .../107-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 124s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 124s Selecting previously unselected package libpcre2-dev:arm64. 124s Preparing to unpack .../108-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 124s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 124s Selecting previously unselected package libpkgconf3:arm64. 124s Preparing to unpack .../109-libpkgconf3_1.8.1-2_arm64.deb ... 124s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 124s Selecting previously unselected package zlib1g-dev:arm64. 124s Preparing to unpack .../110-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 124s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 125s Selecting previously unselected package libpng-dev:arm64. 125s Preparing to unpack .../111-libpng-dev_1.6.43-1_arm64.deb ... 125s Unpacking libpng-dev:arm64 (1.6.43-1) ... 125s Selecting previously unselected package libpotrace0:arm64. 125s Preparing to unpack .../112-libpotrace0_1.16-2_arm64.deb ... 125s Unpacking libpotrace0:arm64 (1.16-2) ... 125s Selecting previously unselected package libptexenc1:arm64. 125s Preparing to unpack .../113-libptexenc1_2023.20230311.66589-9_arm64.deb ... 125s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 125s Selecting previously unselected package libreadline-dev:arm64. 125s Preparing to unpack .../114-libreadline-dev_8.2-3_arm64.deb ... 125s Unpacking libreadline-dev:arm64 (8.2-3) ... 125s Selecting previously unselected package libsharpyuv0:arm64. 125s Preparing to unpack .../115-libsharpyuv0_1.3.2-0.4_arm64.deb ... 125s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 125s Selecting previously unselected package libsm6:arm64. 125s Preparing to unpack .../116-libsm6_2%3a1.2.3-1build2_arm64.deb ... 125s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 125s Selecting previously unselected package libsynctex2:arm64. 125s Preparing to unpack .../117-libsynctex2_2023.20230311.66589-9_arm64.deb ... 125s Unpacking libsynctex2:arm64 (2023.20230311.66589-9) ... 125s Selecting previously unselected package libtcl8.6:arm64. 125s Preparing to unpack .../118-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 125s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 125s Selecting previously unselected package libteckit0:arm64. 125s Preparing to unpack .../119-libteckit0_2.5.12+ds1-1_arm64.deb ... 125s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 125s Selecting previously unselected package libtexlua53-5:arm64. 125s Preparing to unpack .../120-libtexlua53-5_2023.20230311.66589-9_arm64.deb ... 125s Unpacking libtexlua53-5:arm64 (2023.20230311.66589-9) ... 125s Selecting previously unselected package libjbig0:arm64. 125s Preparing to unpack .../121-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 125s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 125s Selecting previously unselected package libwebp7:arm64. 125s Preparing to unpack .../122-libwebp7_1.3.2-0.4_arm64.deb ... 125s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 126s Selecting previously unselected package libtiff6:arm64. 126s Preparing to unpack .../123-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 126s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 126s Selecting previously unselected package libxft2:arm64. 126s Preparing to unpack .../124-libxft2_2.3.6-1_arm64.deb ... 126s Unpacking libxft2:arm64 (2.3.6-1) ... 126s Selecting previously unselected package libxss1:arm64. 126s Preparing to unpack .../125-libxss1_1%3a1.2.3-1build2_arm64.deb ... 126s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 126s Selecting previously unselected package libtk8.6:arm64. 126s Preparing to unpack .../126-libtk8.6_8.6.13-2_arm64.deb ... 126s Unpacking libtk8.6:arm64 (8.6.13-2) ... 126s Selecting previously unselected package libxt6:arm64. 126s Preparing to unpack .../127-libxt6_1%3a1.2.1-1.1_arm64.deb ... 126s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 126s Selecting previously unselected package libxmu6:arm64. 126s Preparing to unpack .../128-libxmu6_2%3a1.1.3-3_arm64.deb ... 126s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 126s Selecting previously unselected package libxpm4:arm64. 126s Preparing to unpack .../129-libxpm4_1%3a3.5.17-1_arm64.deb ... 126s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 126s Selecting previously unselected package libxaw7:arm64. 126s Preparing to unpack .../130-libxaw7_2%3a1.0.14-1_arm64.deb ... 126s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 126s Selecting previously unselected package libxi6:arm64. 126s Preparing to unpack .../131-libxi6_2%3a1.8.1-1_arm64.deb ... 126s Unpacking libxi6:arm64 (2:1.8.1-1) ... 126s Selecting previously unselected package libzzip-0-13:arm64. 126s Preparing to unpack .../132-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 126s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 126s Selecting previously unselected package node-bootstrap-sass. 126s Preparing to unpack .../133-node-bootstrap-sass_3.4.3-2_all.deb ... 126s Unpacking node-bootstrap-sass (3.4.3-2) ... 126s Selecting previously unselected package node-html5shiv. 126s Preparing to unpack .../134-node-html5shiv_3.7.3+dfsg-5_all.deb ... 126s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 126s Selecting previously unselected package node-normalize.css. 126s Preparing to unpack .../135-node-normalize.css_8.0.1-5_all.deb ... 126s Unpacking node-normalize.css (8.0.1-5) ... 126s Selecting previously unselected package pandoc-data. 126s Preparing to unpack .../136-pandoc-data_3.1.3-1_all.deb ... 126s Unpacking pandoc-data (3.1.3-1) ... 126s Selecting previously unselected package pandoc. 126s Preparing to unpack .../137-pandoc_3.1.3+ds-2_arm64.deb ... 126s Unpacking pandoc (3.1.3+ds-2) ... 128s Selecting previously unselected package pkgconf-bin. 128s Preparing to unpack .../138-pkgconf-bin_1.8.1-2_arm64.deb ... 128s Unpacking pkgconf-bin (1.8.1-2) ... 128s Selecting previously unselected package pkgconf:arm64. 128s Preparing to unpack .../139-pkgconf_1.8.1-2_arm64.deb ... 128s Unpacking pkgconf:arm64 (1.8.1-2) ... 128s Selecting previously unselected package pkg-config:arm64. 128s Preparing to unpack .../140-pkg-config_1.8.1-2_arm64.deb ... 128s Unpacking pkg-config:arm64 (1.8.1-2) ... 128s Selecting previously unselected package zip. 128s Preparing to unpack .../141-zip_3.0-13_arm64.deb ... 128s Unpacking zip (3.0-13) ... 128s Selecting previously unselected package unzip. 128s Preparing to unpack .../142-unzip_6.0-28ubuntu3_arm64.deb ... 128s Unpacking unzip (6.0-28ubuntu3) ... 128s Selecting previously unselected package xdg-utils. 128s Preparing to unpack .../143-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 128s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 128s Selecting previously unselected package r-base-core. 129s Preparing to unpack .../144-r-base-core_4.3.2-1build1_arm64.deb ... 129s Unpacking r-base-core (4.3.2-1build1) ... 129s Selecting previously unselected package liblzma-dev:arm64. 129s Preparing to unpack .../145-liblzma-dev_5.4.5-0.3_arm64.deb ... 129s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 129s Selecting previously unselected package r-base-dev. 129s Preparing to unpack .../146-r-base-dev_4.3.2-1build1_all.deb ... 129s Unpacking r-base-dev (4.3.2-1build1) ... 129s Selecting previously unselected package pkg-r-autopkgtest. 129s Preparing to unpack .../147-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 129s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 129s Selecting previously unselected package r-bioc-biocgenerics. 129s Preparing to unpack .../148-r-bioc-biocgenerics_0.48.1-2_all.deb ... 129s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 129s Selecting previously unselected package r-bioc-biobase. 129s Preparing to unpack .../149-r-bioc-biobase_2.62.0-1_arm64.deb ... 129s Unpacking r-bioc-biobase (2.62.0-1) ... 129s Selecting previously unselected package r-bioc-s4vectors. 129s Preparing to unpack .../150-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 129s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 129s Selecting previously unselected package r-bioc-iranges. 129s Preparing to unpack .../151-r-bioc-iranges_2.36.0-1_arm64.deb ... 129s Unpacking r-bioc-iranges (2.36.0-1) ... 129s Selecting previously unselected package r-cran-dbi. 129s Preparing to unpack .../152-r-cran-dbi_1.2.2-1_all.deb ... 129s Unpacking r-cran-dbi (1.2.2-1) ... 129s Selecting previously unselected package r-cran-bit. 129s Preparing to unpack .../153-r-cran-bit_4.0.5-1_arm64.deb ... 129s Unpacking r-cran-bit (4.0.5-1) ... 129s Selecting previously unselected package r-cran-bit64. 129s Preparing to unpack .../154-r-cran-bit64_4.0.5-1_arm64.deb ... 129s Unpacking r-cran-bit64 (4.0.5-1) ... 129s Selecting previously unselected package r-cran-rlang. 129s Preparing to unpack .../155-r-cran-rlang_1.1.3-1_arm64.deb ... 129s Unpacking r-cran-rlang (1.1.3-1) ... 129s Selecting previously unselected package r-cran-cli. 130s Preparing to unpack .../156-r-cran-cli_3.6.2-1_arm64.deb ... 130s Unpacking r-cran-cli (3.6.2-1) ... 130s Selecting previously unselected package r-cran-glue. 130s Preparing to unpack .../157-r-cran-glue_1.7.0-1_arm64.deb ... 130s Unpacking r-cran-glue (1.7.0-1) ... 130s Selecting previously unselected package r-cran-lifecycle. 130s Preparing to unpack .../158-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 130s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 130s Selecting previously unselected package r-cran-vctrs. 130s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_arm64.deb ... 130s Unpacking r-cran-vctrs (0.6.5-1) ... 130s Selecting previously unselected package r-cran-blob. 130s Preparing to unpack .../160-r-cran-blob_1.2.4-1_all.deb ... 130s Unpacking r-cran-blob (1.2.4-1) ... 130s Selecting previously unselected package r-cran-fastmap. 130s Preparing to unpack .../161-r-cran-fastmap_1.1.1-1_arm64.deb ... 130s Unpacking r-cran-fastmap (1.1.1-1) ... 130s Selecting previously unselected package r-cran-cachem. 130s Preparing to unpack .../162-r-cran-cachem_1.0.8-1_arm64.deb ... 130s Unpacking r-cran-cachem (1.0.8-1) ... 130s Selecting previously unselected package r-cran-memoise. 130s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 130s Unpacking r-cran-memoise (2.0.1-1) ... 130s Selecting previously unselected package r-cran-pkgconfig. 130s Preparing to unpack .../164-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 130s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 130s Selecting previously unselected package r-cran-plogr. 130s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build1_all.deb ... 130s Unpacking r-cran-plogr (0.2.0-3build1) ... 130s Selecting previously unselected package r-cran-cpp11. 130s Preparing to unpack .../166-r-cran-cpp11_0.4.7-1_all.deb ... 130s Unpacking r-cran-cpp11 (0.4.7-1) ... 130s Selecting previously unselected package r-cran-rsqlite. 130s Preparing to unpack .../167-r-cran-rsqlite_2.3.4-1_arm64.deb ... 130s Unpacking r-cran-rsqlite (2.3.4-1) ... 130s Selecting previously unselected package r-cran-curl. 130s Preparing to unpack .../168-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 130s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-jsonlite. 130s Preparing to unpack .../169-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 130s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 130s Selecting previously unselected package r-cran-mime. 130s Preparing to unpack .../170-r-cran-mime_0.12-1_arm64.deb ... 130s Unpacking r-cran-mime (0.12-1) ... 130s Selecting previously unselected package r-cran-sys. 130s Preparing to unpack .../171-r-cran-sys_3.4.2-1_arm64.deb ... 130s Unpacking r-cran-sys (3.4.2-1) ... 130s Selecting previously unselected package r-cran-askpass. 130s Preparing to unpack .../172-r-cran-askpass_1.2.0-1_arm64.deb ... 130s Unpacking r-cran-askpass (1.2.0-1) ... 130s Selecting previously unselected package r-cran-openssl. 131s Preparing to unpack .../173-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 131s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 131s Selecting previously unselected package r-cran-r6. 131s Preparing to unpack .../174-r-cran-r6_2.5.1-1_all.deb ... 131s Unpacking r-cran-r6 (2.5.1-1) ... 131s Selecting previously unselected package r-cran-httr. 131s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ... 131s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 131s Selecting previously unselected package r-cran-png. 131s Preparing to unpack .../176-r-cran-png_0.1-8-1_arm64.deb ... 131s Unpacking r-cran-png (0.1-8-1) ... 131s Selecting previously unselected package r-bioc-zlibbioc. 131s Preparing to unpack .../177-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 131s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 131s Selecting previously unselected package r-bioc-xvector. 131s Preparing to unpack .../178-r-bioc-xvector_0.42.0-1_arm64.deb ... 131s Unpacking r-bioc-xvector (0.42.0-1) ... 131s Selecting previously unselected package r-cran-bitops. 131s Preparing to unpack .../179-r-cran-bitops_1.0-7-1_arm64.deb ... 131s Unpacking r-cran-bitops (1.0-7-1) ... 131s Selecting previously unselected package r-cran-rcurl. 131s Preparing to unpack .../180-r-cran-rcurl_1.98-1.14+dfsg-1build1_arm64.deb ... 131s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1build1) ... 131s Selecting previously unselected package r-bioc-genomeinfodbdata. 131s Preparing to unpack .../181-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 131s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 132s Selecting previously unselected package r-bioc-genomeinfodb. 132s Preparing to unpack .../182-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 132s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 132s Selecting previously unselected package r-cran-crayon. 132s Preparing to unpack .../183-r-cran-crayon_1.5.2-1_all.deb ... 132s Unpacking r-cran-crayon (1.5.2-1) ... 132s Selecting previously unselected package r-bioc-biostrings. 132s Preparing to unpack .../184-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 132s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 132s Selecting previously unselected package r-bioc-keggrest. 132s Preparing to unpack .../185-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 132s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 132s Selecting previously unselected package r-bioc-annotationdbi. 132s Preparing to unpack .../186-r-bioc-annotationdbi_1.64.1-1_all.deb ... 132s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 132s Selecting previously unselected package r-bioc-genomicranges. 132s Preparing to unpack .../187-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 132s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 132s Selecting previously unselected package r-cran-lazyeval. 132s Preparing to unpack .../188-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 132s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 132s Selecting previously unselected package r-bioc-annotationfilter. 132s Preparing to unpack .../189-r-bioc-annotationfilter_1.26.0+dfsg-1_all.deb ... 132s Unpacking r-bioc-annotationfilter (1.26.0+dfsg-1) ... 132s Selecting previously unselected package r-cran-generics. 132s Preparing to unpack .../190-r-cran-generics_0.1.3-1_all.deb ... 132s Unpacking r-cran-generics (0.1.3-1) ... 132s Selecting previously unselected package r-cran-magrittr. 133s Preparing to unpack .../191-r-cran-magrittr_2.0.3-1_arm64.deb ... 133s Unpacking r-cran-magrittr (2.0.3-1) ... 133s Selecting previously unselected package r-cran-fansi. 133s Preparing to unpack .../192-r-cran-fansi_1.0.5-1_arm64.deb ... 133s Unpacking r-cran-fansi (1.0.5-1) ... 133s Selecting previously unselected package r-cran-utf8. 133s Preparing to unpack .../193-r-cran-utf8_1.2.4-1_arm64.deb ... 133s Unpacking r-cran-utf8 (1.2.4-1) ... 133s Selecting previously unselected package r-cran-pillar. 133s Preparing to unpack .../194-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 133s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 133s Selecting previously unselected package r-cran-tibble. 133s Preparing to unpack .../195-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 133s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 133s Selecting previously unselected package r-cran-withr. 133s Preparing to unpack .../196-r-cran-withr_2.5.0-1_all.deb ... 133s Unpacking r-cran-withr (2.5.0-1) ... 133s Selecting previously unselected package r-cran-tidyselect. 133s Preparing to unpack .../197-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 133s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 133s Selecting previously unselected package r-cran-dplyr. 133s Preparing to unpack .../198-r-cran-dplyr_1.1.4-1_arm64.deb ... 133s Unpacking r-cran-dplyr (1.1.4-1) ... 133s Selecting previously unselected package r-cran-purrr. 133s Preparing to unpack .../199-r-cran-purrr_1.0.2-1_arm64.deb ... 133s Unpacking r-cran-purrr (1.0.2-1) ... 133s Selecting previously unselected package r-cran-stringi. 133s Preparing to unpack .../200-r-cran-stringi_1.8.3-1_arm64.deb ... 133s Unpacking r-cran-stringi (1.8.3-1) ... 133s Selecting previously unselected package r-cran-stringr. 133s Preparing to unpack .../201-r-cran-stringr_1.5.1-1_all.deb ... 133s Unpacking r-cran-stringr (1.5.1-1) ... 133s Selecting previously unselected package r-cran-tidyr. 133s Preparing to unpack .../202-r-cran-tidyr_1.3.1-1_arm64.deb ... 133s Unpacking r-cran-tidyr (1.3.1-1) ... 133s Selecting previously unselected package r-cran-dbplyr. 133s Preparing to unpack .../203-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 133s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 133s Selecting previously unselected package r-cran-filelock. 133s Preparing to unpack .../204-r-cran-filelock_1.0.3-1_arm64.deb ... 133s Unpacking r-cran-filelock (1.0.3-1) ... 133s Selecting previously unselected package r-bioc-biocfilecache. 133s Preparing to unpack .../205-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 133s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 133s Selecting previously unselected package r-bioc-biocio. 133s Preparing to unpack .../206-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 133s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 134s Selecting previously unselected package r-cran-formatr. 134s Preparing to unpack .../207-r-cran-formatr_1.14-1_all.deb ... 134s Unpacking r-cran-formatr (1.14-1) ... 134s Selecting previously unselected package r-cran-lambda.r. 134s Preparing to unpack .../208-r-cran-lambda.r_1.2.4-2build1_all.deb ... 134s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 134s Selecting previously unselected package r-cran-futile.options. 134s Preparing to unpack .../209-r-cran-futile.options_1.0.1-3build1_all.deb ... 134s Unpacking r-cran-futile.options (1.0.1-3build1) ... 134s Selecting previously unselected package r-cran-futile.logger. 134s Preparing to unpack .../210-r-cran-futile.logger_1.4.3-4build1_all.deb ... 134s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 134s Selecting previously unselected package r-cran-snow. 134s Preparing to unpack .../211-r-cran-snow_1%3a0.4.4-2_all.deb ... 134s Unpacking r-cran-snow (1:0.4.4-2) ... 134s Selecting previously unselected package r-cran-codetools. 134s Preparing to unpack .../212-r-cran-codetools_0.2-19-1_all.deb ... 134s Unpacking r-cran-codetools (0.2-19-1) ... 134s Selecting previously unselected package r-cran-bh. 134s Preparing to unpack .../213-r-cran-bh_1.84.0-1_all.deb ... 134s Unpacking r-cran-bh (1.84.0-1) ... 134s Selecting previously unselected package r-bioc-biocparallel. 134s Preparing to unpack .../214-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 134s Unpacking r-bioc-biocparallel (1.36.0-1) ... 134s Selecting previously unselected package r-cran-base64enc. 134s Preparing to unpack .../215-r-cran-base64enc_0.1-3-3_arm64.deb ... 134s Unpacking r-cran-base64enc (0.1-3-3) ... 134s Selecting previously unselected package r-cran-digest. 134s Preparing to unpack .../216-r-cran-digest_0.6.34-1_arm64.deb ... 134s Unpacking r-cran-digest (0.6.34-1) ... 134s Selecting previously unselected package r-cran-ellipsis. 134s Preparing to unpack .../217-r-cran-ellipsis_0.3.2-2_arm64.deb ... 134s Unpacking r-cran-ellipsis (0.3.2-2) ... 134s Selecting previously unselected package r-cran-htmltools. 134s Preparing to unpack .../218-r-cran-htmltools_0.5.7-1_arm64.deb ... 134s Unpacking r-cran-htmltools (0.5.7-1) ... 134s Selecting previously unselected package r-cran-evaluate. 134s Preparing to unpack .../219-r-cran-evaluate_0.23-1_all.deb ... 134s Unpacking r-cran-evaluate (0.23-1) ... 134s Selecting previously unselected package r-cran-xfun. 134s Preparing to unpack .../220-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 134s Unpacking r-cran-xfun (0.41+dfsg-1) ... 134s Selecting previously unselected package r-cran-highr. 134s Preparing to unpack .../221-r-cran-highr_0.10+dfsg-1_all.deb ... 134s Unpacking r-cran-highr (0.10+dfsg-1) ... 134s Selecting previously unselected package r-cran-yaml. 134s Preparing to unpack .../222-r-cran-yaml_2.3.8-1_arm64.deb ... 134s Unpacking r-cran-yaml (2.3.8-1) ... 134s Selecting previously unselected package libjs-mathjax. 134s Preparing to unpack .../223-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 134s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 135s Selecting previously unselected package r-cran-knitr. 135s Preparing to unpack .../224-r-cran-knitr_1.45+dfsg-1_all.deb ... 135s Unpacking r-cran-knitr (1.45+dfsg-1) ... 135s Selecting previously unselected package r-cran-jquerylib. 135s Preparing to unpack .../225-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 135s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 135s Selecting previously unselected package r-cran-fs. 135s Preparing to unpack .../226-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 135s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 135s Selecting previously unselected package r-cran-rappdirs. 135s Preparing to unpack .../227-r-cran-rappdirs_0.3.3-1_arm64.deb ... 135s Unpacking r-cran-rappdirs (0.3.3-1) ... 135s Selecting previously unselected package r-cran-sass. 135s Preparing to unpack .../228-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 135s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 135s Selecting previously unselected package r-cran-bslib. 135s Preparing to unpack .../229-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 135s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 135s Selecting previously unselected package r-cran-fontawesome. 135s Preparing to unpack .../230-r-cran-fontawesome_0.5.2-1_all.deb ... 135s Unpacking r-cran-fontawesome (0.5.2-1) ... 135s Selecting previously unselected package r-cran-tinytex. 135s Preparing to unpack .../231-r-cran-tinytex_0.49-1_all.deb ... 135s Unpacking r-cran-tinytex (0.49-1) ... 135s Selecting previously unselected package libjs-modernizr. 135s Preparing to unpack .../232-libjs-modernizr_2.6.2+ds1-5_all.deb ... 135s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 135s Selecting previously unselected package r-cran-littler. 136s Preparing to unpack .../233-r-cran-littler_0.3.19-1_arm64.deb ... 136s Unpacking r-cran-littler (0.3.19-1) ... 136s Selecting previously unselected package r-cran-pkgkitten. 136s Preparing to unpack .../234-r-cran-pkgkitten_0.2.3-1_all.deb ... 136s Unpacking r-cran-pkgkitten (0.2.3-1) ... 136s Selecting previously unselected package r-cran-rcpp. 136s Preparing to unpack .../235-r-cran-rcpp_1.0.12-1_arm64.deb ... 136s Unpacking r-cran-rcpp (1.0.12-1) ... 136s Selecting previously unselected package r-cran-later. 136s Preparing to unpack .../236-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 136s Unpacking r-cran-later (1.3.2+dfsg-1) ... 136s Selecting previously unselected package r-cran-promises. 136s Preparing to unpack .../237-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 136s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 136s Selecting previously unselected package r-cran-httpuv. 136s Preparing to unpack .../238-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 136s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 136s Selecting previously unselected package r-cran-xtable. 136s Preparing to unpack .../239-r-cran-xtable_1%3a1.8-4-2_all.deb ... 136s Unpacking r-cran-xtable (1:1.8-4-2) ... 136s Selecting previously unselected package r-cran-sourcetools. 136s Preparing to unpack .../240-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 136s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 136s Selecting previously unselected package r-cran-commonmark. 136s Preparing to unpack .../241-r-cran-commonmark_1.9.1-1_arm64.deb ... 136s Unpacking r-cran-commonmark (1.9.1-1) ... 136s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 136s Preparing to unpack .../242-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 136s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 136s Selecting previously unselected package r-cran-shiny. 136s Preparing to unpack .../243-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 136s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 136s Selecting previously unselected package r-cran-rmarkdown. 136s Preparing to unpack .../244-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 136s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 136s Selecting previously unselected package r-cran-bookdown. 136s Preparing to unpack .../245-r-cran-bookdown_0.37+dfsg-1_all.deb ... 136s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 136s Selecting previously unselected package r-cran-biocmanager. 136s Preparing to unpack .../246-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 136s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 136s Selecting previously unselected package tex-common. 136s Preparing to unpack .../247-tex-common_6.18_all.deb ... 136s Unpacking tex-common (6.18) ... 136s Selecting previously unselected package t1utils. 136s Preparing to unpack .../248-t1utils_1.41-4build2_arm64.deb ... 136s Unpacking t1utils (1.41-4build2) ... 136s Selecting previously unselected package texlive-binaries. 136s Preparing to unpack .../249-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 137s Unpacking texlive-binaries (2023.20230311.66589-9) ... 137s Selecting previously unselected package texlive-base. 137s Preparing to unpack .../250-texlive-base_2023.20240207-1_all.deb ... 137s Unpacking texlive-base (2023.20240207-1) ... 138s Selecting previously unselected package texlive-latex-base. 138s Preparing to unpack .../251-texlive-latex-base_2023.20240207-1_all.deb ... 138s Unpacking texlive-latex-base (2023.20240207-1) ... 138s Selecting previously unselected package texlive-bibtex-extra. 138s Preparing to unpack .../252-texlive-bibtex-extra_2023.20240207-1_all.deb ... 138s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 141s Selecting previously unselected package r-bioc-biocstyle. 141s Preparing to unpack .../253-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 141s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 141s Selecting previously unselected package r-cran-xml. 141s Preparing to unpack .../254-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 141s Unpacking r-cran-xml (3.99-0.16.1-1) ... 141s Selecting previously unselected package r-cran-hms. 141s Preparing to unpack .../255-r-cran-hms_1.1.3-1_all.deb ... 141s Unpacking r-cran-hms (1.1.3-1) ... 141s Selecting previously unselected package r-cran-prettyunits. 141s Preparing to unpack .../256-r-cran-prettyunits_1.2.0-1_all.deb ... 141s Unpacking r-cran-prettyunits (1.2.0-1) ... 141s Selecting previously unselected package r-cran-progress. 141s Preparing to unpack .../257-r-cran-progress_1.2.3-1_all.deb ... 141s Unpacking r-cran-progress (1.2.3-1) ... 141s Selecting previously unselected package r-cran-xml2. 141s Preparing to unpack .../258-r-cran-xml2_1.3.6-1_arm64.deb ... 141s Unpacking r-cran-xml2 (1.3.6-1) ... 141s Selecting previously unselected package r-bioc-biomart. 141s Preparing to unpack .../259-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 141s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 141s Selecting previously unselected package r-bioc-rhtslib. 141s Preparing to unpack .../260-r-bioc-rhtslib_2.4.1+dfsg-1_arm64.deb ... 141s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 141s Selecting previously unselected package r-bioc-rsamtools. 141s Preparing to unpack .../261-r-bioc-rsamtools_2.18.0+dfsg-1_arm64.deb ... 141s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 141s Selecting previously unselected package r-cran-matrixstats. 141s Preparing to unpack .../262-r-cran-matrixstats_1.2.0-1_arm64.deb ... 141s Unpacking r-cran-matrixstats (1.2.0-1) ... 142s Selecting previously unselected package r-bioc-matrixgenerics. 142s Preparing to unpack .../263-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 142s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 142s Selecting previously unselected package r-cran-lattice. 142s Preparing to unpack .../264-r-cran-lattice_0.22-5-1_arm64.deb ... 142s Unpacking r-cran-lattice (0.22-5-1) ... 142s Selecting previously unselected package r-cran-matrix. 142s Preparing to unpack .../265-r-cran-matrix_1.6-5-1_arm64.deb ... 142s Unpacking r-cran-matrix (1.6-5-1) ... 142s Selecting previously unselected package r-cran-abind. 142s Preparing to unpack .../266-r-cran-abind_1.4-5-2_all.deb ... 142s Unpacking r-cran-abind (1.4-5-2) ... 142s Selecting previously unselected package r-bioc-s4arrays. 142s Preparing to unpack .../267-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 142s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 142s Selecting previously unselected package r-bioc-sparsearray. 142s Preparing to unpack .../268-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 142s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 142s Selecting previously unselected package r-bioc-delayedarray. 142s Preparing to unpack .../269-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 142s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 142s Selecting previously unselected package r-bioc-summarizedexperiment. 142s Preparing to unpack .../270-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 142s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 142s Selecting previously unselected package r-bioc-genomicalignments. 142s Preparing to unpack .../271-r-bioc-genomicalignments_1.38.2-1_arm64.deb ... 142s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 142s Selecting previously unselected package r-cran-rjson. 142s Preparing to unpack .../272-r-cran-rjson_0.2.21-1_arm64.deb ... 142s Unpacking r-cran-rjson (0.2.21-1) ... 142s Selecting previously unselected package r-cran-restfulr. 142s Preparing to unpack .../273-r-cran-restfulr_0.0.15-1_arm64.deb ... 142s Unpacking r-cran-restfulr (0.0.15-1) ... 142s Selecting previously unselected package r-bioc-rtracklayer. 142s Preparing to unpack .../274-r-bioc-rtracklayer_1.62.0-1_arm64.deb ... 142s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 142s Selecting previously unselected package r-bioc-bsgenome. 142s Preparing to unpack .../275-r-bioc-bsgenome_1.70.2-1_all.deb ... 142s Unpacking r-bioc-bsgenome (1.70.2-1) ... 142s Selecting previously unselected package r-bioc-genomicfeatures. 142s Preparing to unpack .../276-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 142s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 142s Selecting previously unselected package r-bioc-protgenerics. 142s Preparing to unpack .../277-r-bioc-protgenerics_1.34.0-1_all.deb ... 142s Unpacking r-bioc-protgenerics (1.34.0-1) ... 142s Selecting previously unselected package r-bioc-ensembldb. 142s Preparing to unpack .../278-r-bioc-ensembldb_2.26.0+dfsg-1_all.deb ... 142s Unpacking r-bioc-ensembldb (2.26.0+dfsg-1) ... 142s Selecting previously unselected package r-bioc-org.hs.eg.db. 142s Preparing to unpack .../279-r-bioc-org.hs.eg.db_3.18.0-1_all.deb ... 142s Unpacking r-bioc-org.hs.eg.db (3.18.0-1) ... 144s Selecting previously unselected package r-cran-markdown. 144s Preparing to unpack .../280-r-cran-markdown_1.12+dfsg-1_all.deb ... 144s Unpacking r-cran-markdown (1.12+dfsg-1) ... 144s Selecting previously unselected package r-cran-runit. 144s Preparing to unpack .../281-r-cran-runit_0.4.32-3_all.deb ... 144s Unpacking r-cran-runit (0.4.32-3) ... 144s Selecting previously unselected package autopkgtest-satdep. 144s Preparing to unpack .../282-1-autopkgtest-satdep.deb ... 144s Unpacking autopkgtest-satdep (0) ... 144s Setting up libjs-json (0~20221030+~1.0.8-1) ... 144s Setting up javascript-common (11+nmu1) ... 144s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 144s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 144s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 144s Setting up libpaper1:arm64 (1.1.29) ... 145s 145s Creating config file /etc/papersize with new version 145s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 145s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 145s Setting up libxpm4:arm64 (1:3.5.17-1) ... 145s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 145s Setting up libxi6:arm64 (2:1.8.1-1) ... 145s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 145s Setting up libdatrie1:arm64 (0.2.13-3) ... 145s Setting up libjs-popper.js (1.16.1+ds-6) ... 145s Setting up libxcb-render0:arm64 (1.15-1) ... 145s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 145s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 145s Setting up libjs-lunr (2.3.9~dfsg-2) ... 145s Setting up unzip (6.0-28ubuntu3) ... 145s Setting up liblatex-tounicode-perl (0.54-2) ... 145s Setting up x11-common (1:7.7+23ubuntu2) ... 145s Setting up node-html5shiv (3.7.3+dfsg-5) ... 145s Setting up libpsl5t64:arm64 (0.21.2-1.1) ... 145s Setting up libdeflate0:arm64 (1.19-1) ... 145s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 145s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 145s Setting up libxcb-shm0:arm64 (1.15-1) ... 145s Setting up libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 145s Setting up libpaper-utils (1.1.29) ... 145s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 145s Setting up libjs-modernizr (2.6.2+ds1-5) ... 145s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 145s Setting up libpcre2-16-0:arm64 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Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 151s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 151s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 151s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 151s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 151s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 151s Setting up r-bioc-annotationdbi (1.64.1-1) ... 151s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 151s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 151s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 151s Setting up r-bioc-genomicalignments (1.38.2-1) ... 151s Setting up r-cran-bookdown (0.37+dfsg-1) ... 151s Setting up r-bioc-org.hs.eg.db (3.18.0-1) ... 151s Setting up r-bioc-rtracklayer (1.62.0-1) ... 151s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 151s Setting up r-bioc-bsgenome (1.70.2-1) ... 151s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 151s Setting up r-bioc-ensembldb (2.26.0+dfsg-1) ... 151s Setting up autopkgtest-satdep (0) ... 151s Processing triggers for man-db (2.12.0-3) ... 152s Processing triggers for install-info (7.1-3) ... 152s Processing triggers for libc-bin (2.39-0ubuntu2) ... 152s Processing triggers for tex-common (6.18) ... 153s Running updmap-sys. This may take some time... done. 153s Running mktexlsr /var/lib/texmf ... done. 153s Building format(s) --all. 191s This may take some time... done. 213s (Reading database ... 124382 files and directories currently installed.) 213s Removing autopkgtest-satdep (0) ... 214s autopkgtest [13:57:52]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 214s autopkgtest [13:57:52]: test pkg-r-autopkgtest: [----------------------- 214s Test: Try to load the R library GenomicFeatures 214s 214s R version 4.3.2 (2023-10-31) -- "Eye Holes" 214s Copyright (C) 2023 The R Foundation for Statistical Computing 214s Platform: aarch64-unknown-linux-gnu (64-bit) 214s 214s R is free software and comes with ABSOLUTELY NO WARRANTY. 214s You are welcome to redistribute it under certain conditions. 214s Type 'license()' or 'licence()' for distribution details. 214s 214s R is a collaborative project with many contributors. 214s Type 'contributors()' for more information and 214s 'citation()' on how to cite R or R packages in publications. 214s 214s Type 'demo()' for some demos, 'help()' for on-line help, or 214s 'help.start()' for an HTML browser interface to help. 214s Type 'q()' to quit R. 214s 215s > library('GenomicFeatures') 215s Loading required package: BiocGenerics 215s 215s Attaching package: ‘BiocGenerics’ 215s 215s The following objects are masked from ‘package:stats’: 215s 215s IQR, mad, sd, var, xtabs 215s 215s The following objects are masked from ‘package:base’: 215s 215s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 215s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 215s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 215s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 215s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 215s table, tapply, union, unique, unsplit, which.max, which.min 215s 215s Loading required package: S4Vectors 215s Loading required package: stats4 216s 216s Attaching package: ‘S4Vectors’ 216s 216s The following object is masked from ‘package:utils’: 216s 216s findMatches 216s 216s The following objects are masked from ‘package:base’: 216s 216s expand.grid, I, unname 216s 216s Loading required package: IRanges 217s Loading required package: GenomeInfoDb 217s Loading required package: GenomicRanges 218s Loading required package: AnnotationDbi 218s Loading required package: Biobase 218s Welcome to Bioconductor 218s 218s Vignettes contain introductory material; view with 218s 'browseVignettes()'. To cite Bioconductor, see 218s 'citation("Biobase")', and for packages 'citation("pkgname")'. 218s 227s > 227s > 227s Other tests are currently unsupported! 227s They will be progressively added. 228s autopkgtest [13:58:06]: test pkg-r-autopkgtest: -----------------------] 228s pkg-r-autopkgtest PASS 228s autopkgtest [13:58:06]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 228s autopkgtest [13:58:06]: @@@@@@@@@@@@@@@@@@@@ summary 228s pkg-r-autopkgtest PASS 239s Creating nova instance adt-noble-arm64-r-bioc-genomicfeatures-20240316-135418-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...