0s autopkgtest [17:28:47]: starting date and time: 2024-03-16 17:28:47+0000 0s autopkgtest [17:28:47]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:28:47]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.lit3ztfd/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-dropletutils --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-20.secgroup --name adt-noble-arm64-r-bioc-dropletutils-20240316-172847-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 84s autopkgtest [17:30:11]: testbed dpkg architecture: arm64 85s autopkgtest [17:30:12]: testbed apt version: 2.7.12 85s autopkgtest [17:30:12]: @@@@@@@@@@@@@@@@@@@@ test bed setup 85s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 86s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 86s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 86s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 86s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 86s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 86s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 86s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 86s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 86s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB] 86s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 86s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 86s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 88s Fetched 9060 kB in 2s (5366 kB/s) 88s Reading package lists... 91s Reading package lists... 91s Building dependency tree... 91s Reading state information... 92s Calculating upgrade... 92s The following packages will be REMOVED: 92s libglib2.0-0 libssl3 92s The following NEW packages will be installed: 92s libglib2.0-0t64 libssl3t64 xdg-user-dirs 92s The following packages have been kept back: 92s curl 92s The following packages will be upgraded: 92s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 92s ubuntu-minimal ubuntu-standard 92s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 92s Need to get 4613 kB of archives. 92s After this operation, 211 kB of additional disk space will be used. 92s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 93s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 93s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 93s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 93s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 93s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 93s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 93s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 93s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 93s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 94s Fetched 4613 kB in 1s (6451 kB/s) 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 94s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 94s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 94s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 94s udisks2 depends on libglib2.0-0 (>= 2.77.0). 94s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 94s python3-gi depends on libglib2.0-0 (>= 2.77.0). 94s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 94s netplan.io depends on libglib2.0-0 (>= 2.70.0). 94s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 94s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 94s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 94s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 94s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 94s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 94s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 94s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 94s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 94s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 94s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 94s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 94s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 94s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 94s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 94s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 94s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 94s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 94s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 94s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 94s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 94s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 94s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 94s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 94s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 94s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 94s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 94s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 94s fwupd depends on libglib2.0-0 (>= 2.79.0). 94s bolt depends on libglib2.0-0 (>= 2.56.0). 94s 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 94s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 94s Selecting previously unselected package libglib2.0-0t64:arm64. 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 94s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 94s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 94s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 94s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 94s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 94s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 95s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 95s wget depends on libssl3 (>= 3.0.0). 95s u-boot-tools depends on libssl3 (>= 3.0.0). 95s tnftp depends on libssl3 (>= 3.0.0). 95s tcpdump depends on libssl3 (>= 3.0.0). 95s systemd-resolved depends on libssl3 (>= 3.0.0). 95s systemd depends on libssl3 (>= 3.0.0). 95s sudo depends on libssl3 (>= 3.0.0). 95s sbsigntool depends on libssl3 (>= 3.0.0). 95s rsync depends on libssl3 (>= 3.0.0). 95s python3-cryptography depends on libssl3 (>= 3.0.0). 95s openssh-server depends on libssl3 (>= 3.0.10). 95s openssh-client depends on libssl3 (>= 3.0.10). 95s mtd-utils depends on libssl3 (>= 3.0.0). 95s mokutil depends on libssl3 (>= 3.0.0). 95s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 95s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 95s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 95s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 95s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 95s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 95s libnvme1 depends on libssl3 (>= 3.0.0). 95s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 95s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 95s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 95s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 95s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 95s kmod depends on libssl3 (>= 3.0.0). 95s dhcpcd-base depends on libssl3 (>= 3.0.0). 95s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 95s 95s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 95s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 95s Selecting previously unselected package libssl3t64:arm64. 95s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 95s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 95s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 95s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 95s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 95s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 95s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 95s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 95s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 95s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 95s Unpacking ubuntu-minimal (1.536) over (1.535) ... 95s Selecting previously unselected package xdg-user-dirs. 95s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 95s Unpacking xdg-user-dirs (0.18-1) ... 95s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 95s Unpacking ubuntu-standard (1.536) over (1.535) ... 95s Setting up ubuntu-minimal (1.536) ... 95s Setting up xdg-user-dirs (0.18-1) ... 95s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 95s Setting up libtirpc-common (1.3.4+ds-1.1) ... 95s Setting up ubuntu-standard (1.536) ... 95s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 96s No schema files found: doing nothing. 96s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 96s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 96s Setting up openssl (3.0.13-0ubuntu1) ... 96s Setting up readline-common (8.2-3.1) ... 96s Processing triggers for man-db (2.12.0-3) ... 97s Processing triggers for install-info (7.1-3) ... 97s Processing triggers for libc-bin (2.39-0ubuntu2) ... 97s Reading package lists... 98s Building dependency tree... 98s Reading state information... 98s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 99s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 99s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 99s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 99s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 100s Reading package lists... 100s Reading package lists... 101s Building dependency tree... 101s Reading state information... 101s Calculating upgrade... 101s The following packages have been kept back: 101s curl 101s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 105s autopkgtest [17:30:32]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 106s autopkgtest [17:30:33]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-dropletutils 108s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-dropletutils 1.22.0+ds-1 (dsc) [2540 B] 108s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-dropletutils 1.22.0+ds-1 (tar) [83.0 kB] 108s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-dropletutils 1.22.0+ds-1 (diff) [3964 B] 108s gpgv: Signature made Fri Dec 1 06:38:13 2023 UTC 108s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 108s gpgv: issuer "tille@debian.org" 108s gpgv: Can't check signature: No public key 108s dpkg-source: warning: cannot verify inline signature for ./r-bioc-dropletutils_1.22.0+ds-1.dsc: no acceptable signature found 108s autopkgtest [17:30:35]: testing package r-bioc-dropletutils version 1.22.0+ds-1 108s autopkgtest [17:30:35]: build not needed 110s autopkgtest [17:30:37]: test pkg-r-autopkgtest: preparing testbed 111s Reading package lists... 111s Building dependency tree... 111s Reading state information... 112s Starting pkgProblemResolver with broken count: 0 112s Starting 2 pkgProblemResolver with broken count: 0 112s Done 113s The following additional packages will be installed: 113s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 113s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 113s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 113s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 113s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 113s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 113s gfortran-aarch64-linux-gnu hdf5-helpers icu-devtools javascript-common 113s libaec-dev libaec0 libasan8 libatomic1 libbibtex-parser-perl libblas-dev 113s libblas3 libblosc1 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 113s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4-openssl-dev libcurl4t64 113s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 113s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1 113s libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 113s libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libhwasan0 libice6 libicu-dev 113s libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 113s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 113s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 113s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 113s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 113s libjs-popper.js libjs-prettify libjs-sifter.js 113s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 113s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 113s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 113s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 113s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 113s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 113s libreadline8t64 libsharpyuv0 libsm6 libsnappy1v5 libssl-dev libstdc++-13-dev 113s libsynctex2 libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 113s libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 113s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 113s libxrender1 libxss1 libxt6t64 libzzip-0-13 linux-libc-dev littler 113s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 113s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 113s r-bioc-beachmat r-bioc-biobase r-bioc-biocgenerics r-bioc-biocparallel 113s r-bioc-biocstyle r-bioc-delayedarray r-bioc-delayedmatrixstats 113s r-bioc-dropletutils r-bioc-edger r-bioc-genomeinfodb r-bioc-genomeinfodbdata 113s r-bioc-genomicranges r-bioc-hdf5array r-bioc-iranges r-bioc-limma 113s r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib 113s r-bioc-s4arrays r-bioc-s4vectors r-bioc-scuttle r-bioc-singlecellexperiment 113s r-bioc-sparsearray r-bioc-sparsematrixstats r-bioc-summarizedexperiment 113s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-base64enc r-cran-bh 113s r-cran-biocmanager r-cran-bitops r-cran-bookdown r-cran-brio r-cran-bslib 113s r-cran-cachem r-cran-callr r-cran-cli r-cran-codetools r-cran-commonmark 113s r-cran-cpp11 r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest 113s r-cran-dqrng r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 113s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 113s r-cran-futile.options r-cran-glue r-cran-highr r-cran-htmltools 113s r-cran-httpuv r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r 113s r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-locfit 113s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 113s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 113s r-cran-pkgload r-cran-praise r-cran-processx r-cran-promises r-cran-ps 113s r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rappdirs 113s r-cran-rcpp r-cran-rcurl r-cran-rematch2 r-cran-rlang r-cran-rmarkdown 113s r-cran-rprojroot r-cran-sass r-cran-shiny r-cran-sitmo r-cran-snow 113s r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr 113s r-cran-testthat r-cran-tibble r-cran-tinytex r-cran-utf8 r-cran-vctrs 113s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml rpcsvc-proto 113s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 113s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 113s Suggested packages: 113s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 113s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 113s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 113s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 113s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 113s libboost-context1.83-dev libboost-contract1.83-dev 113s libboost-coroutine1.83-dev libboost-date-time1.83-dev 113s libboost-exception1.83-dev libboost-fiber1.83-dev 113s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 113s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 113s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 113s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 113s libboost-numpy1.83-dev libboost-program-options1.83-dev 113s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 113s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 113s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 113s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 113s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 113s glibc-doc libcurl4-doc libidn-dev libkrb5-dev libldap2-dev librtmp-dev 113s libssh2-1-dev libhdf5-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras 113s fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libssl-doc 113s libstdc++-13-doc tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex 113s texlive-luatex pandoc-citeproc texlive-latex-extra context wkhtmltopdf 113s librsvg2-bin groff ghc php python ruby libjs-katex 113s citation-style-language-styles elpa-ess r-doc-info | r-doc-pdf r-mathlib 113s r-base-html texlive-plain-generic texlive-fonts-recommended 113s texlive-fonts-extra texlive-extra-utils texinfo r-cran-rcmdcheck r-bioc-all 113s r-cran-runit r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi 113s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc 113s r-cran-doparallel r-bioc-variantannotation r-bioc-genomicalignments 113s r-bioc-shortread r-cran-batchtools r-cran-data.table r-bioc-genefilter 113s r-cran-lobstr r-cran-profmem r-cran-readr r-bioc-org.hs.eg.db 113s r-cran-seuratobject r-bioc-genomicfeatures r-bioc-bsgenome 113s r-bioc-rtracklayer r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq 113s r-bioc-keggrest r-bioc-experimenthub r-cran-biasedurn r-cran-ellipse 113s r-cran-gplots r-cran-mass r-bioc-go.db r-cran-bit64 r-cran-bench 113s r-cran-dplyr r-cran-ggplot2 r-cran-mockery r-cran-tinytest r-bioc-graph 113s r-bioc-scrnaseq r-bioc-scran r-cran-rtsne r-cran-covr r-cran-spelling 113s r-cran-rstudioapi r-cran-markdown r-cran-getopt r-cran-interp r-cran-gam 113s r-cran-httr r-cran-dbi r-cran-formattable r-cran-nanotime 113s r-cran-palmerpenguins r-cran-scales r-cran-survival r-cran-units 113s r-cran-vdiffr r-cran-roxygen2 r-cran-inline r-cran-rmpi r-cran-rlecuyer 113s r-cran-blob r-cran-here r-cran-hms r-cran-purrr r-cran-tidyr r-cran-plm 113s r-cran-zoo debhelper ghostscript gv | postscript-viewer perl-tk xpdf 113s | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc 113s wp2latex 113s Recommended packages: 113s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 113s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-curl 113s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 113s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-xml2 r-cran-webshot 113s r-cran-covr r-cran-ggplot2 r-cran-thematic r-cran-cliapp r-cran-mockery 113s r-cran-whoami r-cran-bench r-cran-decor r-cran-lobstr r-cran-progress 113s r-cran-scales r-cran-gh r-cran-spelling r-cran-mvtnorm libpcg-cpp-dev 113s r-cran-unitizer r-cran-dplyr r-cran-rsvg r-cran-survival r-cran-dbi 113s r-cran-rsqlite r-cran-cairo r-cran-markdown r-cran-ragg r-cran-httr 113s r-cran-r.rsp r-cran-sf r-cran-gridsvg r-cran-jpeg r-cran-magick r-cran-png 113s r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-svglite 113s node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-r.devices 113s r-cran-lubridate r-cran-mathjaxr r-cran-mockr r-cran-webfakes r-cran-future 113s r-cran-purrr r-cran-pingr r-cran-xml r-cran-usethis r-cran-dygraphs 113s r-cran-data.table r-cran-formattable r-cran-bit64 r-cran-generics 113s r-cran-pkgdown r-cran-zeallot r-cran-renv r-cran-runit lmodern dvisvgm 113s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 113s x11-xserver-utils 113s The following packages will be REMOVED: 113s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 113s The following NEW packages will be installed: 113s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 113s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 113s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 113s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 113s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 113s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 113s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu hdf5-helpers 113s icu-devtools javascript-common libaec-dev libaec0 libasan8 libatomic1 113s libbibtex-parser-perl libblas-dev libblas3 libblosc1 libboost-dev 113s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 113s libcrypt-dev libcurl4-openssl-dev libcurl4t64 libdatrie1 libdeflate0 113s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 113s libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev 113s libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 113s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 113s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 113s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 113s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 113s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 113s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 113s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 113s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 113s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 113s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 113s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 113s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 113s libreadline8t64 libsharpyuv0 libsm6 libsnappy1v5 libssl-dev libstdc++-13-dev 113s libsynctex2 libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 113s libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 113s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 113s libxrender1 libxss1 libxt6t64 libzzip-0-13 linux-libc-dev littler 113s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 113s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 113s r-bioc-beachmat r-bioc-biobase r-bioc-biocgenerics r-bioc-biocparallel 113s r-bioc-biocstyle r-bioc-delayedarray r-bioc-delayedmatrixstats 113s r-bioc-dropletutils r-bioc-edger r-bioc-genomeinfodb r-bioc-genomeinfodbdata 113s r-bioc-genomicranges r-bioc-hdf5array r-bioc-iranges r-bioc-limma 113s r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib 113s r-bioc-s4arrays r-bioc-s4vectors r-bioc-scuttle r-bioc-singlecellexperiment 113s r-bioc-sparsearray r-bioc-sparsematrixstats r-bioc-summarizedexperiment 113s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-base64enc r-cran-bh 113s r-cran-biocmanager r-cran-bitops r-cran-bookdown r-cran-brio r-cran-bslib 113s r-cran-cachem r-cran-callr r-cran-cli r-cran-codetools r-cran-commonmark 113s r-cran-cpp11 r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest 113s r-cran-dqrng r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 113s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 113s r-cran-futile.options r-cran-glue r-cran-highr r-cran-htmltools 113s r-cran-httpuv r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r 113s r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-locfit 113s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 113s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 113s r-cran-pkgload r-cran-praise r-cran-processx r-cran-promises r-cran-ps 113s r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rappdirs 113s r-cran-rcpp r-cran-rcurl r-cran-rematch2 r-cran-rlang r-cran-rmarkdown 113s r-cran-rprojroot r-cran-sass r-cran-shiny r-cran-sitmo r-cran-snow 113s r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr 113s r-cran-testthat r-cran-tibble r-cran-tinytex r-cran-utf8 r-cran-vctrs 113s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml rpcsvc-proto 113s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 113s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 113s The following packages will be upgraded: 113s curl 113s 1 upgraded, 290 newly installed, 5 to remove and 0 not upgraded. 113s Need to get 403 MB/403 MB of archives. 113s After this operation, 1344 MB of additional disk space will be used. 113s Get:1 /tmp/autopkgtest.3kCOVL/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [768 B] 113s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 113s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 113s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 113s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 113s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 113s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 113s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 113s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 114s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 114s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 114s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 114s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 114s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 114s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 114s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 114s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 114s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 114s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 114s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 114s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 114s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 114s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 114s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 114s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 114s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 114s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 114s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 114s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 114s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 114s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 115s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 115s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 115s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 115s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 115s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 115s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 115s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 115s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 115s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 115s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 115s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 115s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 115s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 115s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 115s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 115s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 115s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 115s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 115s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 115s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 115s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 115s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 115s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 115s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 115s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 115s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 hdf5-helpers arm64 1.10.10+repack-3ubuntu1 [15.5 kB] 115s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 115s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 115s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 115s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 115s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 116s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 116s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 116s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 116s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libsnappy1v5 arm64 1.1.10-1 [28.2 kB] 116s Get:67 http://ftpmaster.internal/ubuntu noble/universe arm64 libblosc1 arm64 1.21.5+ds-1 [25.5 kB] 116s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 116s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 116s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 116s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 116s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 116s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 116s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 116s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 116s Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4-openssl-dev arm64 8.5.0-2ubuntu7 [454 kB] 116s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 116s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 116s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 116s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 116s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 116s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.10+repack-3ubuntu1 [1189 kB] 116s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-cpp-103-1 arm64 1.10.10+repack-3ubuntu1 [120 kB] 116s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-fortran-102 arm64 1.10.10+repack-3ubuntu1 [86.3 kB] 116s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB] 116s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-fortran-100 arm64 1.10.10+repack-3ubuntu1 [30.7 kB] 116s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-cpp-100 arm64 1.10.10+repack-3ubuntu1 [10.7 kB] 116s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 116s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 116s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 116s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 116s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 116s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 116s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec-dev arm64 1.1.2-1 [18.8 kB] 116s Get:95 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl-dev arm64 3.0.13-0ubuntu1 [2335 kB] 116s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-dev arm64 1.10.10+repack-3ubuntu1 [3036 kB] 116s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 116s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 116s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 116s Get:100 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 116s Get:101 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 116s Get:102 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 117s Get:103 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 117s Get:104 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 117s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 117s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 117s Get:107 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 117s Get:108 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 117s Get:109 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 117s Get:110 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 117s Get:111 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 117s Get:112 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 117s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 117s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 117s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 117s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 117s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 117s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 117s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 117s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 117s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 117s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 117s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 117s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 117s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 117s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 117s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 118s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 118s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 118s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 118s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 118s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 118s Get:133 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 118s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 118s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 118s Get:136 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 118s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 118s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 118s Get:139 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 118s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 118s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 118s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 118s Get:143 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 118s Get:144 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 118s Get:145 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 118s Get:146 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 118s Get:147 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 118s Get:148 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 118s Get:149 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 118s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 118s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 118s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 118s Get:153 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 118s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 118s Get:155 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 118s Get:156 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 118s Get:157 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 118s Get:158 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 119s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 119s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 119s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 119s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 119s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 119s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 119s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 120s Get:166 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 120s Get:167 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 120s Get:168 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 120s Get:169 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 120s Get:170 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 120s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 120s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 120s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 120s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 120s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 120s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 120s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 120s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 120s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 120s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 120s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 120s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 120s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 120s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 120s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 120s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 120s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 120s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-beachmat arm64 2.18.1+ds-1 [1561 kB] 120s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 120s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 121s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 121s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 121s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 121s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 121s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 121s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 121s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 121s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 121s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 121s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 121s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 121s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 121s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 121s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 121s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 121s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 121s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 121s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 121s Get:209 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 121s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 121s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 121s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 121s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 121s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 121s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 121s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 121s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 121s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 121s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 122s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 122s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 122s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 122s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 122s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 122s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 122s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 122s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 122s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 122s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 122s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 122s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 122s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 122s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 122s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 122s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 122s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 122s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 122s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 122s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 122s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 122s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 122s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 122s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 122s Get:244 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 122s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 122s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 123s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 123s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 126s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 126s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsematrixstats arm64 1.14.0+dfsg-1 [815 kB] 126s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedmatrixstats all 1.24.0+ds-1 [483 kB] 126s Get:252 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 126s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 126s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 126s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 126s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 126s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 126s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-singlecellexperiment all 1.24.0+ds-1 [828 kB] 126s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5lib arm64 1.24.2+dfsg-1 [96.1 kB] 126s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5filters arm64 1.14.1+dfsg-3 [135 kB] 126s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5 arm64 2.46.1+dfsg-1 [805 kB] 126s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-hdf5array arm64 1.30.1-1 [8757 kB] 126s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 127s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-limma arm64 3.58.1+dfsg-1 [1897 kB] 127s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-locfit arm64 1.5-9.8-1 [507 kB] 127s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-edger arm64 4.0.16+dfsg-1 [1141 kB] 127s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 127s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r.oo all 1.26.0-1 [955 kB] 127s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r.utils all 2.12.3-1 [1386 kB] 127s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sitmo arm64 2.0.2-1 [129 kB] 127s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dqrng arm64 0.3.2+dfsg-1 [157 kB] 127s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-scuttle arm64 1.12.0+dfsg-1 [423 kB] 127s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-dropletutils arm64 1.22.0+ds-1 [393 kB] 127s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 127s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 127s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 127s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 127s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 127s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 127s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 127s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 127s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 127s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 127s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 127s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 127s Get:286 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 127s Get:287 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 127s Get:288 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 127s Get:289 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 127s Get:290 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 127s Get:291 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 129s Preconfiguring packages ... 129s Fetched 403 MB in 14s (28.4 MB/s) 129s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 129s wget depends on libpsl5 (>= 0.16.0). 129s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 129s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 129s 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 129s Removing libpsl5:arm64 (0.21.2-1build1) ... 130s Selecting previously unselected package libpsl5t64:arm64. 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 130s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 130s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 130s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 130s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 130s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 130s Selecting previously unselected package libcurl4t64:arm64. 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 130s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 130s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 130s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 130s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 130s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 130s 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 130s Removing libpng16-16:arm64 (1.6.43-1) ... 130s Selecting previously unselected package libpng16-16t64:arm64. 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 130s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 130s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 130s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 130s parted depends on libreadline8 (>= 6.0). 130s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 130s gpgsm depends on libreadline8 (>= 6.0). 130s gpgconf depends on libreadline8 (>= 6.0). 130s gpg depends on libreadline8 (>= 6.0). 130s gawk depends on libreadline8 (>= 6.0). 130s fdisk depends on libreadline8 (>= 6.0). 130s 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 130s Removing libreadline8:arm64 (8.2-3) ... 130s Selecting previously unselected package libreadline8t64:arm64. 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 130s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 130s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 130s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 130s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 130s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 130s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 130s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 130s lsof depends on libtirpc3 (>= 1.0.2). 130s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 130s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 130s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 130s iproute2 depends on libtirpc3 (>= 1.0.2). 130s 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 130s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 130s Selecting previously unselected package libtirpc3t64:arm64. 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 130s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 130s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 130s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 130s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 130s Selecting previously unselected package libc-dev-bin. 130s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 130s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 130s Selecting previously unselected package linux-libc-dev:arm64. 130s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 130s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 131s Selecting previously unselected package libcrypt-dev:arm64. 131s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 131s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 131s Selecting previously unselected package libtirpc-dev:arm64. 131s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 131s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 131s Selecting previously unselected package libnsl-dev:arm64. 131s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 131s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 131s Selecting previously unselected package rpcsvc-proto. 131s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 131s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 131s Selecting previously unselected package libc6-dev:arm64. 131s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 131s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 131s Selecting previously unselected package libisl23:arm64. 131s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 131s Unpacking libisl23:arm64 (0.26-3) ... 131s Selecting previously unselected package libmpc3:arm64. 131s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 131s Unpacking libmpc3:arm64 (1.3.1-1) ... 131s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 131s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 131s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 131s Selecting previously unselected package cpp-13. 131s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 131s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 131s Selecting previously unselected package cpp-aarch64-linux-gnu. 131s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 131s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 131s Selecting previously unselected package cpp. 131s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 131s Unpacking cpp (4:13.2.0-7ubuntu1) ... 131s Selecting previously unselected package libcc1-0:arm64. 131s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 131s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 131s Selecting previously unselected package libgomp1:arm64. 131s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 131s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 131s Selecting previously unselected package libitm1:arm64. 131s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 131s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 131s Selecting previously unselected package libatomic1:arm64. 131s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 131s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 131s Selecting previously unselected package libasan8:arm64. 131s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 131s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 131s Selecting previously unselected package liblsan0:arm64. 131s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 131s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 131s Selecting previously unselected package libtsan2:arm64. 131s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 131s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 131s Selecting previously unselected package libubsan1:arm64. 132s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 132s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 132s Selecting previously unselected package libhwasan0:arm64. 132s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 132s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 132s Selecting previously unselected package libgcc-13-dev:arm64. 132s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 132s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 132s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 132s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package gcc-13. 132s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 132s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package gcc-aarch64-linux-gnu. 132s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 132s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 132s Selecting previously unselected package gcc. 132s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 132s Unpacking gcc (4:13.2.0-7ubuntu1) ... 132s Selecting previously unselected package libstdc++-13-dev:arm64. 132s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 132s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package g++-13-aarch64-linux-gnu. 132s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 132s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 133s Selecting previously unselected package g++-13. 133s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 133s Unpacking g++-13 (13.2.0-17ubuntu2) ... 133s Selecting previously unselected package g++-aarch64-linux-gnu. 133s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 133s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 133s Selecting previously unselected package g++. 133s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 133s Unpacking g++ (4:13.2.0-7ubuntu1) ... 133s Selecting previously unselected package build-essential. 133s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 133s Unpacking build-essential (12.10ubuntu1) ... 133s Selecting previously unselected package dctrl-tools. 133s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 133s Unpacking dctrl-tools (2.24-3build2) ... 133s Selecting previously unselected package fonts-dejavu-mono. 133s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 133s Unpacking fonts-dejavu-mono (2.37-8) ... 133s Selecting previously unselected package fonts-dejavu-core. 133s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 133s Unpacking fonts-dejavu-core (2.37-8) ... 133s Selecting previously unselected package fontconfig-config. 133s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 133s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 133s Selecting previously unselected package libfontconfig1:arm64. 133s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 133s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 133s Selecting previously unselected package fontconfig. 133s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 133s Unpacking fontconfig (2.15.0-1ubuntu1) ... 133s Selecting previously unselected package fonts-font-awesome. 133s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 133s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 133s Selecting previously unselected package fonts-glyphicons-halflings. 133s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 133s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 133s Selecting previously unselected package fonts-lmodern. 133s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 133s Unpacking fonts-lmodern (2.005-1) ... 133s Selecting previously unselected package fonts-mathjax. 133s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 133s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 134s Selecting previously unselected package libgfortran5:arm64. 134s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 134s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 134s Selecting previously unselected package libgfortran-13-dev:arm64. 134s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 134s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 134s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 134s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 134s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 134s Selecting previously unselected package gfortran-13. 134s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 134s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 134s Selecting previously unselected package gfortran-aarch64-linux-gnu. 134s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 134s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 134s Selecting previously unselected package gfortran. 134s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 134s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 134s Selecting previously unselected package hdf5-helpers. 134s Preparing to unpack .../050-hdf5-helpers_1.10.10+repack-3ubuntu1_arm64.deb ... 134s Unpacking hdf5-helpers (1.10.10+repack-3ubuntu1) ... 134s Selecting previously unselected package icu-devtools. 134s Preparing to unpack .../051-icu-devtools_74.2-1ubuntu1_arm64.deb ... 134s Unpacking icu-devtools (74.2-1ubuntu1) ... 134s Selecting previously unselected package javascript-common. 134s Preparing to unpack .../052-javascript-common_11+nmu1_all.deb ... 134s Unpacking javascript-common (11+nmu1) ... 134s Selecting previously unselected package libaec0:arm64. 135s Preparing to unpack .../053-libaec0_1.1.2-1_arm64.deb ... 135s Unpacking libaec0:arm64 (1.1.2-1) ... 135s Selecting previously unselected package libio-string-perl. 135s Preparing to unpack .../054-libio-string-perl_1.08-4_all.deb ... 135s Unpacking libio-string-perl (1.08-4) ... 135s Selecting previously unselected package liblatex-tounicode-perl. 135s Preparing to unpack .../055-liblatex-tounicode-perl_0.54-2_all.deb ... 135s Unpacking liblatex-tounicode-perl (0.54-2) ... 135s Selecting previously unselected package libbibtex-parser-perl. 135s Preparing to unpack .../056-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 135s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 135s Selecting previously unselected package libblas3:arm64. 135s Preparing to unpack .../057-libblas3_3.12.0-3_arm64.deb ... 135s Unpacking libblas3:arm64 (3.12.0-3) ... 135s Selecting previously unselected package libblas-dev:arm64. 135s Preparing to unpack .../058-libblas-dev_3.12.0-3_arm64.deb ... 135s Unpacking libblas-dev:arm64 (3.12.0-3) ... 135s Selecting previously unselected package libsnappy1v5:arm64. 135s Preparing to unpack .../059-libsnappy1v5_1.1.10-1_arm64.deb ... 135s Unpacking libsnappy1v5:arm64 (1.1.10-1) ... 135s Selecting previously unselected package libblosc1:arm64. 135s Preparing to unpack .../060-libblosc1_1.21.5+ds-1_arm64.deb ... 135s Unpacking libblosc1:arm64 (1.21.5+ds-1) ... 135s Selecting previously unselected package libboost1.83-dev:arm64. 135s Preparing to unpack .../061-libboost1.83-dev_1.83.0-2ubuntu1_arm64.deb ... 135s Unpacking libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 137s Selecting previously unselected package libboost-dev:arm64. 137s Preparing to unpack .../062-libboost-dev_1.83.0.1ubuntu2_arm64.deb ... 137s Unpacking libboost-dev:arm64 (1.83.0.1ubuntu2) ... 137s Selecting previously unselected package libbz2-dev:arm64. 137s Preparing to unpack .../063-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 137s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 137s Selecting previously unselected package libpixman-1-0:arm64. 137s Preparing to unpack .../064-libpixman-1-0_0.42.2-1_arm64.deb ... 137s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 137s Selecting previously unselected package libxcb-render0:arm64. 137s Preparing to unpack .../065-libxcb-render0_1.15-1_arm64.deb ... 137s Unpacking libxcb-render0:arm64 (1.15-1) ... 137s Selecting previously unselected package libxcb-shm0:arm64. 137s Preparing to unpack .../066-libxcb-shm0_1.15-1_arm64.deb ... 137s Unpacking libxcb-shm0:arm64 (1.15-1) ... 137s Selecting previously unselected package libxrender1:arm64. 137s Preparing to unpack .../067-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 137s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 137s Selecting previously unselected package libcairo2:arm64. 137s Preparing to unpack .../068-libcairo2_1.18.0-1_arm64.deb ... 137s Unpacking libcairo2:arm64 (1.18.0-1) ... 137s Selecting previously unselected package libcurl4-openssl-dev:arm64. 137s Preparing to unpack .../069-libcurl4-openssl-dev_8.5.0-2ubuntu7_arm64.deb ... 137s Unpacking libcurl4-openssl-dev:arm64 (8.5.0-2ubuntu7) ... 137s Selecting previously unselected package libdatrie1:arm64. 137s Preparing to unpack .../070-libdatrie1_0.2.13-3_arm64.deb ... 137s Unpacking libdatrie1:arm64 (0.2.13-3) ... 137s Selecting previously unselected package libdeflate0:arm64. 137s Preparing to unpack .../071-libdeflate0_1.19-1_arm64.deb ... 137s Unpacking libdeflate0:arm64 (1.19-1) ... 137s Selecting previously unselected package libgraphite2-3:arm64. 137s Preparing to unpack .../072-libgraphite2-3_1.3.14-2_arm64.deb ... 137s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 137s Selecting previously unselected package libharfbuzz0b:arm64. 137s Preparing to unpack .../073-libharfbuzz0b_8.3.0-2_arm64.deb ... 137s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 137s Selecting previously unselected package libsz2:arm64. 137s Preparing to unpack .../074-libsz2_1.1.2-1_arm64.deb ... 137s Unpacking libsz2:arm64 (1.1.2-1) ... 137s Selecting previously unselected package libhdf5-103-1:arm64. 137s Preparing to unpack .../075-libhdf5-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 137s Unpacking libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 137s Selecting previously unselected package libhdf5-cpp-103-1:arm64. 137s Preparing to unpack .../076-libhdf5-cpp-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 137s Unpacking libhdf5-cpp-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 137s Selecting previously unselected package libhdf5-fortran-102:arm64. 137s Preparing to unpack .../077-libhdf5-fortran-102_1.10.10+repack-3ubuntu1_arm64.deb ... 137s Unpacking libhdf5-fortran-102:arm64 (1.10.10+repack-3ubuntu1) ... 137s Selecting previously unselected package libhdf5-hl-100:arm64. 137s Preparing to unpack .../078-libhdf5-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ... 137s Unpacking libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 137s Selecting previously unselected package libhdf5-hl-fortran-100:arm64. 137s Preparing to unpack .../079-libhdf5-hl-fortran-100_1.10.10+repack-3ubuntu1_arm64.deb ... 137s Unpacking libhdf5-hl-fortran-100:arm64 (1.10.10+repack-3ubuntu1) ... 137s Selecting previously unselected package libhdf5-hl-cpp-100:arm64. 137s Preparing to unpack .../080-libhdf5-hl-cpp-100_1.10.10+repack-3ubuntu1_arm64.deb ... 137s Unpacking libhdf5-hl-cpp-100:arm64 (1.10.10+repack-3ubuntu1) ... 137s Selecting previously unselected package zlib1g-dev:arm64. 137s Preparing to unpack .../081-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 137s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 137s Selecting previously unselected package libjpeg-turbo8:arm64. 137s Preparing to unpack .../082-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 137s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 137s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 137s Preparing to unpack .../083-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 137s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 137s Selecting previously unselected package libjpeg8:arm64. 138s Preparing to unpack .../084-libjpeg8_8c-2ubuntu11_arm64.deb ... 138s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 138s Selecting previously unselected package libjpeg8-dev:arm64. 138s Preparing to unpack .../085-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 138s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 138s Selecting previously unselected package libjpeg-dev:arm64. 138s Preparing to unpack .../086-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 138s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 138s Selecting previously unselected package libaec-dev:arm64. 138s Preparing to unpack .../087-libaec-dev_1.1.2-1_arm64.deb ... 138s Unpacking libaec-dev:arm64 (1.1.2-1) ... 138s Selecting previously unselected package libssl-dev:arm64. 138s Preparing to unpack .../088-libssl-dev_3.0.13-0ubuntu1_arm64.deb ... 138s Unpacking libssl-dev:arm64 (3.0.13-0ubuntu1) ... 138s Selecting previously unselected package libhdf5-dev. 138s Preparing to unpack .../089-libhdf5-dev_1.10.10+repack-3ubuntu1_arm64.deb ... 138s Unpacking libhdf5-dev (1.10.10+repack-3ubuntu1) ... 138s Selecting previously unselected package x11-common. 138s Preparing to unpack .../090-x11-common_1%3a7.7+23ubuntu2_all.deb ... 138s Unpacking x11-common (1:7.7+23ubuntu2) ... 138s Selecting previously unselected package libice6:arm64. 138s Preparing to unpack .../091-libice6_2%3a1.0.10-1build2_arm64.deb ... 138s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 138s Selecting previously unselected package libicu-dev:arm64. 138s Preparing to unpack .../092-libicu-dev_74.2-1ubuntu1_arm64.deb ... 138s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 138s Selecting previously unselected package libjs-bootstrap. 138s Preparing to unpack .../093-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 138s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 138s Selecting previously unselected package libjs-popper.js. 138s Preparing to unpack .../094-libjs-popper.js_1.16.1+ds-6_all.deb ... 138s Unpacking libjs-popper.js (1.16.1+ds-6) ... 138s Selecting previously unselected package libjs-bootstrap4. 138s Preparing to unpack .../095-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 138s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 138s Selecting previously unselected package libjs-d3. 139s Preparing to unpack .../096-libjs-d3_3.5.17-4_all.deb ... 139s Unpacking libjs-d3 (3.5.17-4) ... 139s Selecting previously unselected package libjs-es5-shim. 139s Preparing to unpack .../097-libjs-es5-shim_4.6.7-2_all.deb ... 139s Unpacking libjs-es5-shim (4.6.7-2) ... 139s Selecting previously unselected package libjs-highlight.js. 139s Preparing to unpack .../098-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 139s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 139s Selecting previously unselected package libjs-jquery. 139s Preparing to unpack .../099-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 139s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 139s Selecting previously unselected package libjs-jquery-datatables. 139s Preparing to unpack .../100-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 139s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 139s Selecting previously unselected package libjs-sifter.js. 139s Preparing to unpack .../101-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 139s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 139s Selecting previously unselected package libjs-microplugin.js. 139s Preparing to unpack .../102-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 139s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 139s Selecting previously unselected package libjs-jquery-selectize.js. 139s Preparing to unpack .../103-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 139s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 139s Selecting previously unselected package libjs-jquery-ui. 139s Preparing to unpack .../104-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 139s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 139s Selecting previously unselected package libjs-json. 139s Preparing to unpack .../105-libjs-json_0~20221030+~1.0.8-1_all.deb ... 139s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 139s Selecting previously unselected package libjs-lunr. 139s Preparing to unpack .../106-libjs-lunr_2.3.9~dfsg-2_all.deb ... 139s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 139s Selecting previously unselected package libjs-prettify. 139s Preparing to unpack .../107-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 139s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 139s Selecting previously unselected package libkpathsea6:arm64. 139s Preparing to unpack .../108-libkpathsea6_2023.20230311.66589-9_arm64.deb ... 139s Unpacking libkpathsea6:arm64 (2023.20230311.66589-9) ... 139s Selecting previously unselected package liblapack3:arm64. 139s Preparing to unpack .../109-liblapack3_3.12.0-3_arm64.deb ... 139s Unpacking liblapack3:arm64 (3.12.0-3) ... 139s Selecting previously unselected package liblapack-dev:arm64. 139s Preparing to unpack .../110-liblapack-dev_3.12.0-3_arm64.deb ... 139s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 139s Selecting previously unselected package liblerc4:arm64. 139s Preparing to unpack .../111-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 139s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 139s Selecting previously unselected package liblua5.4-0:arm64. 139s Preparing to unpack .../112-liblua5.4-0_5.4.6-3_arm64.deb ... 139s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 139s Selecting previously unselected package libncurses-dev:arm64. 139s Preparing to unpack .../113-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 139s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 139s Selecting previously unselected package libthai-data. 139s Preparing to unpack .../114-libthai-data_0.1.29-2_all.deb ... 139s Unpacking libthai-data (0.1.29-2) ... 139s Selecting previously unselected package libthai0:arm64. 139s Preparing to unpack .../115-libthai0_0.1.29-2_arm64.deb ... 139s Unpacking libthai0:arm64 (0.1.29-2) ... 139s Selecting previously unselected package libpango-1.0-0:arm64. 139s Preparing to unpack .../116-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 139s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 139s Selecting previously unselected package libpangoft2-1.0-0:arm64. 139s Preparing to unpack .../117-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 139s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 139s Selecting previously unselected package libpangocairo-1.0-0:arm64. 139s Preparing to unpack .../118-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 139s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 139s Selecting previously unselected package libpaper1:arm64. 140s Preparing to unpack .../119-libpaper1_1.1.29_arm64.deb ... 140s Unpacking libpaper1:arm64 (1.1.29) ... 140s Selecting previously unselected package libpaper-utils. 140s Preparing to unpack .../120-libpaper-utils_1.1.29_arm64.deb ... 140s Unpacking libpaper-utils (1.1.29) ... 140s Selecting previously unselected package libpcre2-16-0:arm64. 140s Preparing to unpack .../121-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 140s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 140s Selecting previously unselected package libpcre2-32-0:arm64. 140s Preparing to unpack .../122-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 140s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 140s Selecting previously unselected package libpcre2-posix3:arm64. 140s Preparing to unpack .../123-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 140s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 140s Selecting previously unselected package libpcre2-dev:arm64. 140s Preparing to unpack .../124-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 140s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 140s Selecting previously unselected package libpkgconf3:arm64. 140s Preparing to unpack .../125-libpkgconf3_1.8.1-2_arm64.deb ... 140s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 140s Selecting previously unselected package libpng-dev:arm64. 140s Preparing to unpack .../126-libpng-dev_1.6.43-3_arm64.deb ... 140s Unpacking libpng-dev:arm64 (1.6.43-3) ... 140s Selecting previously unselected package libpotrace0:arm64. 140s Preparing to unpack .../127-libpotrace0_1.16-2_arm64.deb ... 140s Unpacking libpotrace0:arm64 (1.16-2) ... 140s Selecting previously unselected package libptexenc1:arm64. 140s Preparing to unpack .../128-libptexenc1_2023.20230311.66589-9_arm64.deb ... 140s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 140s Selecting previously unselected package libreadline-dev:arm64. 140s Preparing to unpack .../129-libreadline-dev_8.2-3.1_arm64.deb ... 140s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 140s Selecting previously unselected package libsharpyuv0:arm64. 140s Preparing to unpack .../130-libsharpyuv0_1.3.2-0.4_arm64.deb ... 140s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 140s Selecting previously unselected package libsm6:arm64. 140s Preparing to unpack .../131-libsm6_2%3a1.2.3-1build2_arm64.deb ... 140s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 140s Selecting previously unselected package libsynctex2:arm64. 140s Preparing to unpack .../132-libsynctex2_2023.20230311.66589-9_arm64.deb ... 140s Unpacking libsynctex2:arm64 (2023.20230311.66589-9) ... 140s Selecting previously unselected package libtcl8.6:arm64. 140s Preparing to unpack .../133-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 140s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 140s Selecting previously unselected package libteckit0:arm64. 140s Preparing to unpack .../134-libteckit0_2.5.12+ds1-1_arm64.deb ... 140s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 140s Selecting previously unselected package libtexlua53-5:arm64. 140s Preparing to unpack .../135-libtexlua53-5_2023.20230311.66589-9_arm64.deb ... 140s Unpacking libtexlua53-5:arm64 (2023.20230311.66589-9) ... 140s Selecting previously unselected package libjbig0:arm64. 140s Preparing to unpack .../136-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 140s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 140s Selecting previously unselected package libwebp7:arm64. 140s Preparing to unpack .../137-libwebp7_1.3.2-0.4_arm64.deb ... 140s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 140s Selecting previously unselected package libtiff6:arm64. 140s Preparing to unpack .../138-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 140s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 140s Selecting previously unselected package libxft2:arm64. 141s Preparing to unpack .../139-libxft2_2.3.6-1_arm64.deb ... 141s Unpacking libxft2:arm64 (2.3.6-1) ... 141s Selecting previously unselected package libxss1:arm64. 141s Preparing to unpack .../140-libxss1_1%3a1.2.3-1build2_arm64.deb ... 141s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 141s Selecting previously unselected package libtk8.6:arm64. 141s Preparing to unpack .../141-libtk8.6_8.6.13-2_arm64.deb ... 141s Unpacking libtk8.6:arm64 (8.6.13-2) ... 141s Selecting previously unselected package libxt6t64:arm64. 141s Preparing to unpack .../142-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 141s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 141s Selecting previously unselected package libxmu6:arm64. 141s Preparing to unpack .../143-libxmu6_2%3a1.1.3-3_arm64.deb ... 141s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 141s Selecting previously unselected package libxpm4:arm64. 141s Preparing to unpack .../144-libxpm4_1%3a3.5.17-1_arm64.deb ... 141s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 141s Selecting previously unselected package libxaw7:arm64. 141s Preparing to unpack .../145-libxaw7_2%3a1.0.14-1_arm64.deb ... 141s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 141s Selecting previously unselected package libxi6:arm64. 141s Preparing to unpack .../146-libxi6_2%3a1.8.1-1_arm64.deb ... 141s Unpacking libxi6:arm64 (2:1.8.1-1) ... 141s Selecting previously unselected package libzzip-0-13:arm64. 141s Preparing to unpack .../147-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 141s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 141s Selecting previously unselected package zip. 141s Preparing to unpack .../148-zip_3.0-13_arm64.deb ... 141s Unpacking zip (3.0-13) ... 141s Selecting previously unselected package unzip. 141s Preparing to unpack .../149-unzip_6.0-28ubuntu3_arm64.deb ... 141s Unpacking unzip (6.0-28ubuntu3) ... 141s Selecting previously unselected package xdg-utils. 141s Preparing to unpack .../150-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 141s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 141s Selecting previously unselected package r-base-core. 141s Preparing to unpack .../151-r-base-core_4.3.3-2build1_arm64.deb ... 141s Unpacking r-base-core (4.3.3-2build1) ... 141s Selecting previously unselected package r-cran-littler. 141s Preparing to unpack .../152-r-cran-littler_0.3.19-1_arm64.deb ... 141s Unpacking r-cran-littler (0.3.19-1) ... 141s Selecting previously unselected package littler. 141s Preparing to unpack .../153-littler_0.3.19-1_all.deb ... 141s Unpacking littler (0.3.19-1) ... 141s Selecting previously unselected package node-bootstrap-sass. 141s Preparing to unpack .../154-node-bootstrap-sass_3.4.3-2_all.deb ... 141s Unpacking node-bootstrap-sass (3.4.3-2) ... 141s Selecting previously unselected package node-html5shiv. 141s Preparing to unpack .../155-node-html5shiv_3.7.3+dfsg-5_all.deb ... 141s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 141s Selecting previously unselected package node-normalize.css. 142s Preparing to unpack .../156-node-normalize.css_8.0.1-5_all.deb ... 142s Unpacking node-normalize.css (8.0.1-5) ... 142s Selecting previously unselected package pandoc-data. 142s Preparing to unpack .../157-pandoc-data_3.1.3-1_all.deb ... 142s Unpacking pandoc-data (3.1.3-1) ... 142s Selecting previously unselected package pandoc. 142s Preparing to unpack .../158-pandoc_3.1.3+ds-2_arm64.deb ... 142s Unpacking pandoc (3.1.3+ds-2) ... 143s Selecting previously unselected package pkgconf-bin. 143s Preparing to unpack .../159-pkgconf-bin_1.8.1-2_arm64.deb ... 143s Unpacking pkgconf-bin (1.8.1-2) ... 143s Selecting previously unselected package pkgconf:arm64. 143s Preparing to unpack .../160-pkgconf_1.8.1-2_arm64.deb ... 143s Unpacking pkgconf:arm64 (1.8.1-2) ... 143s Selecting previously unselected package pkg-config:arm64. 143s Preparing to unpack .../161-pkg-config_1.8.1-2_arm64.deb ... 143s Unpacking pkg-config:arm64 (1.8.1-2) ... 143s Selecting previously unselected package liblzma-dev:arm64. 143s Preparing to unpack .../162-liblzma-dev_5.4.5-0.3_arm64.deb ... 143s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 143s Selecting previously unselected package r-base-dev. 143s Preparing to unpack .../163-r-base-dev_4.3.3-2build1_all.deb ... 143s Unpacking r-base-dev (4.3.3-2build1) ... 143s Selecting previously unselected package pkg-r-autopkgtest. 143s Preparing to unpack .../164-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 143s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 143s Selecting previously unselected package r-bioc-biocgenerics. 143s Preparing to unpack .../165-r-bioc-biocgenerics_0.48.1-2_all.deb ... 143s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 143s Selecting previously unselected package r-cran-lattice. 143s Preparing to unpack .../166-r-cran-lattice_0.22-5-1_arm64.deb ... 143s Unpacking r-cran-lattice (0.22-5-1) ... 143s Selecting previously unselected package r-cran-matrix. 143s Preparing to unpack .../167-r-cran-matrix_1.6-5-1_arm64.deb ... 143s Unpacking r-cran-matrix (1.6-5-1) ... 143s Selecting previously unselected package r-cran-matrixstats. 143s Preparing to unpack .../168-r-cran-matrixstats_1.2.0-1_arm64.deb ... 143s Unpacking r-cran-matrixstats (1.2.0-1) ... 143s Selecting previously unselected package r-bioc-matrixgenerics. 143s Preparing to unpack .../169-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 143s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 143s Selecting previously unselected package r-bioc-s4vectors. 143s Preparing to unpack .../170-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 143s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 143s Selecting previously unselected package r-bioc-iranges. 143s Preparing to unpack .../171-r-bioc-iranges_2.36.0-1_arm64.deb ... 143s Unpacking r-bioc-iranges (2.36.0-1) ... 143s Selecting previously unselected package r-cran-abind. 143s Preparing to unpack .../172-r-cran-abind_1.4-5-2_all.deb ... 143s Unpacking r-cran-abind (1.4-5-2) ... 143s Selecting previously unselected package r-cran-crayon. 143s Preparing to unpack .../173-r-cran-crayon_1.5.2-1_all.deb ... 143s Unpacking r-cran-crayon (1.5.2-1) ... 143s Selecting previously unselected package r-bioc-s4arrays. 143s Preparing to unpack .../174-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 143s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 143s Selecting previously unselected package r-bioc-zlibbioc. 143s Preparing to unpack .../175-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 143s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 143s Selecting previously unselected package r-bioc-xvector. 143s Preparing to unpack .../176-r-bioc-xvector_0.42.0-1_arm64.deb ... 143s Unpacking r-bioc-xvector (0.42.0-1) ... 143s Selecting previously unselected package r-bioc-sparsearray. 143s Preparing to unpack .../177-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 143s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 143s Selecting previously unselected package r-bioc-delayedarray. 143s Preparing to unpack .../178-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 143s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 143s Selecting previously unselected package r-cran-pkgkitten. 144s Preparing to unpack .../179-r-cran-pkgkitten_0.2.3-1_all.deb ... 144s Unpacking r-cran-pkgkitten (0.2.3-1) ... 144s Selecting previously unselected package r-cran-rcpp. 144s Preparing to unpack .../180-r-cran-rcpp_1.0.12-1_arm64.deb ... 144s Unpacking r-cran-rcpp (1.0.12-1) ... 144s Selecting previously unselected package r-bioc-beachmat. 144s Preparing to unpack .../181-r-bioc-beachmat_2.18.1+ds-1_arm64.deb ... 144s Unpacking r-bioc-beachmat (2.18.1+ds-1) ... 144s Selecting previously unselected package r-bioc-biobase. 144s Preparing to unpack .../182-r-bioc-biobase_2.62.0-1_arm64.deb ... 144s Unpacking r-bioc-biobase (2.62.0-1) ... 144s Selecting previously unselected package r-cran-formatr. 144s Preparing to unpack .../183-r-cran-formatr_1.14-1_all.deb ... 144s Unpacking r-cran-formatr (1.14-1) ... 144s Selecting previously unselected package r-cran-lambda.r. 144s Preparing to unpack .../184-r-cran-lambda.r_1.2.4-2build1_all.deb ... 144s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 144s Selecting previously unselected package r-cran-futile.options. 144s Preparing to unpack .../185-r-cran-futile.options_1.0.1-3build1_all.deb ... 144s Unpacking r-cran-futile.options (1.0.1-3build1) ... 144s Selecting previously unselected package r-cran-futile.logger. 144s Preparing to unpack .../186-r-cran-futile.logger_1.4.3-4build1_all.deb ... 144s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 144s Selecting previously unselected package r-cran-snow. 144s Preparing to unpack .../187-r-cran-snow_1%3a0.4.4-2_all.deb ... 144s Unpacking r-cran-snow (1:0.4.4-2) ... 144s Selecting previously unselected package r-cran-codetools. 144s Preparing to unpack .../188-r-cran-codetools_0.2-19-1_all.deb ... 144s Unpacking r-cran-codetools (0.2-19-1) ... 144s Selecting previously unselected package r-cran-bh. 144s Preparing to unpack .../189-r-cran-bh_1.84.0-1_all.deb ... 144s Unpacking r-cran-bh (1.84.0-1) ... 144s Selecting previously unselected package r-cran-cpp11. 144s Preparing to unpack .../190-r-cran-cpp11_0.4.7-1_all.deb ... 144s Unpacking r-cran-cpp11 (0.4.7-1) ... 144s Selecting previously unselected package r-bioc-biocparallel. 144s Preparing to unpack .../191-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 144s Unpacking r-bioc-biocparallel (1.36.0-1) ... 144s Selecting previously unselected package r-cran-base64enc. 144s Preparing to unpack .../192-r-cran-base64enc_0.1-3-3_arm64.deb ... 144s Unpacking r-cran-base64enc (0.1-3-3) ... 144s Selecting previously unselected package r-cran-digest. 144s Preparing to unpack .../193-r-cran-digest_0.6.34-1_arm64.deb ... 144s Unpacking r-cran-digest (0.6.34-1) ... 144s Selecting previously unselected package r-cran-rlang. 144s Preparing to unpack .../194-r-cran-rlang_1.1.3-1_arm64.deb ... 144s Unpacking r-cran-rlang (1.1.3-1) ... 144s Selecting previously unselected package r-cran-ellipsis. 145s Preparing to unpack .../195-r-cran-ellipsis_0.3.2-2_arm64.deb ... 145s Unpacking r-cran-ellipsis (0.3.2-2) ... 145s Selecting previously unselected package r-cran-fastmap. 145s Preparing to unpack .../196-r-cran-fastmap_1.1.1-1_arm64.deb ... 145s Unpacking r-cran-fastmap (1.1.1-1) ... 145s Selecting previously unselected package r-cran-htmltools. 145s Preparing to unpack .../197-r-cran-htmltools_0.5.7-1_arm64.deb ... 145s Unpacking r-cran-htmltools (0.5.7-1) ... 145s Selecting previously unselected package r-cran-evaluate. 145s Preparing to unpack .../198-r-cran-evaluate_0.23-1_all.deb ... 145s Unpacking r-cran-evaluate (0.23-1) ... 145s Selecting previously unselected package r-cran-xfun. 145s Preparing to unpack .../199-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 145s Unpacking r-cran-xfun (0.41+dfsg-1) ... 145s Selecting previously unselected package r-cran-highr. 145s Preparing to unpack .../200-r-cran-highr_0.10+dfsg-1_all.deb ... 145s Unpacking r-cran-highr (0.10+dfsg-1) ... 145s Selecting previously unselected package r-cran-yaml. 145s Preparing to unpack .../201-r-cran-yaml_2.3.8-1_arm64.deb ... 145s Unpacking r-cran-yaml (2.3.8-1) ... 145s Selecting previously unselected package libjs-mathjax. 145s Preparing to unpack .../202-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 145s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 145s Selecting previously unselected package r-cran-knitr. 145s Preparing to unpack .../203-r-cran-knitr_1.45+dfsg-1_all.deb ... 145s Unpacking r-cran-knitr (1.45+dfsg-1) ... 145s Selecting previously unselected package r-cran-cachem. 146s Preparing to unpack .../204-r-cran-cachem_1.0.8-1_arm64.deb ... 146s Unpacking r-cran-cachem (1.0.8-1) ... 146s Selecting previously unselected package r-cran-jquerylib. 146s Preparing to unpack .../205-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 146s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 146s Selecting previously unselected package r-cran-jsonlite. 146s Preparing to unpack .../206-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 146s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 146s Selecting previously unselected package r-cran-cli. 146s Preparing to unpack .../207-r-cran-cli_3.6.2-1_arm64.deb ... 146s Unpacking r-cran-cli (3.6.2-1) ... 146s Selecting previously unselected package r-cran-glue. 146s Preparing to unpack .../208-r-cran-glue_1.7.0-1_arm64.deb ... 146s Unpacking r-cran-glue (1.7.0-1) ... 146s Selecting previously unselected package r-cran-lifecycle. 146s Preparing to unpack .../209-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 146s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 146s Selecting previously unselected package r-cran-memoise. 146s Preparing to unpack .../210-r-cran-memoise_2.0.1-1_all.deb ... 146s Unpacking r-cran-memoise (2.0.1-1) ... 146s Selecting previously unselected package r-cran-mime. 146s Preparing to unpack .../211-r-cran-mime_0.12-1_arm64.deb ... 146s Unpacking r-cran-mime (0.12-1) ... 146s Selecting previously unselected package r-cran-fs. 146s Preparing to unpack .../212-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 146s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 146s Selecting previously unselected package r-cran-r6. 146s Preparing to unpack .../213-r-cran-r6_2.5.1-1_all.deb ... 146s Unpacking r-cran-r6 (2.5.1-1) ... 146s Selecting previously unselected package r-cran-rappdirs. 146s Preparing to unpack .../214-r-cran-rappdirs_0.3.3-1_arm64.deb ... 146s Unpacking r-cran-rappdirs (0.3.3-1) ... 146s Selecting previously unselected package r-cran-sass. 146s Preparing to unpack .../215-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 146s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 146s Selecting previously unselected package r-cran-bslib. 146s Preparing to unpack .../216-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 146s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 146s Selecting previously unselected package r-cran-fontawesome. 146s Preparing to unpack .../217-r-cran-fontawesome_0.5.2-1_all.deb ... 146s Unpacking r-cran-fontawesome (0.5.2-1) ... 146s Selecting previously unselected package r-cran-magrittr. 146s Preparing to unpack .../218-r-cran-magrittr_2.0.3-1_arm64.deb ... 146s Unpacking r-cran-magrittr (2.0.3-1) ... 146s Selecting previously unselected package r-cran-stringi. 146s Preparing to unpack .../219-r-cran-stringi_1.8.3-1_arm64.deb ... 146s Unpacking r-cran-stringi (1.8.3-1) ... 146s Selecting previously unselected package r-cran-vctrs. 146s Preparing to unpack .../220-r-cran-vctrs_0.6.5-1_arm64.deb ... 146s Unpacking r-cran-vctrs (0.6.5-1) ... 146s Selecting previously unselected package r-cran-stringr. 146s Preparing to unpack .../221-r-cran-stringr_1.5.1-1_all.deb ... 146s Unpacking r-cran-stringr (1.5.1-1) ... 146s Selecting previously unselected package r-cran-tinytex. 146s Preparing to unpack .../222-r-cran-tinytex_0.49-1_all.deb ... 146s Unpacking r-cran-tinytex (0.49-1) ... 146s Selecting previously unselected package libjs-modernizr. 147s Preparing to unpack .../223-libjs-modernizr_2.6.2+ds1-5_all.deb ... 147s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 147s Selecting previously unselected package r-cran-later. 147s Preparing to unpack .../224-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 147s Unpacking r-cran-later (1.3.2+dfsg-1) ... 147s Selecting previously unselected package r-cran-promises. 147s Preparing to unpack .../225-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 147s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 147s Selecting previously unselected package r-cran-httpuv. 147s Preparing to unpack .../226-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 147s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 147s Selecting previously unselected package r-cran-xtable. 147s Preparing to unpack .../227-r-cran-xtable_1%3a1.8-4-2_all.deb ... 147s Unpacking r-cran-xtable (1:1.8-4-2) ... 147s Selecting previously unselected package r-cran-sourcetools. 147s Preparing to unpack .../228-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 147s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 147s Selecting previously unselected package r-cran-withr. 147s Preparing to unpack .../229-r-cran-withr_2.5.0-1_all.deb ... 147s Unpacking r-cran-withr (2.5.0-1) ... 147s Selecting previously unselected package r-cran-commonmark. 147s Preparing to unpack .../230-r-cran-commonmark_1.9.1-1_arm64.deb ... 147s Unpacking r-cran-commonmark (1.9.1-1) ... 147s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 147s Preparing to unpack .../231-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 147s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 147s Selecting previously unselected package r-cran-shiny. 147s Preparing to unpack .../232-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 147s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 147s Selecting previously unselected package r-cran-rmarkdown. 147s Preparing to unpack .../233-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 147s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 147s Selecting previously unselected package r-cran-bookdown. 147s Preparing to unpack .../234-r-cran-bookdown_0.37+dfsg-1_all.deb ... 147s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 147s Selecting previously unselected package r-cran-biocmanager. 147s Preparing to unpack .../235-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 147s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 147s Selecting previously unselected package tex-common. 147s Preparing to unpack .../236-tex-common_6.18_all.deb ... 147s Unpacking tex-common (6.18) ... 147s Selecting previously unselected package t1utils. 147s Preparing to unpack .../237-t1utils_1.41-4build2_arm64.deb ... 147s Unpacking t1utils (1.41-4build2) ... 147s Selecting previously unselected package texlive-binaries. 147s Preparing to unpack .../238-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 147s Unpacking texlive-binaries (2023.20230311.66589-9) ... 148s Selecting previously unselected package texlive-base. 148s Preparing to unpack .../239-texlive-base_2023.20240207-1_all.deb ... 148s Unpacking texlive-base (2023.20240207-1) ... 149s Selecting previously unselected package texlive-latex-base. 149s Preparing to unpack .../240-texlive-latex-base_2023.20240207-1_all.deb ... 149s Unpacking texlive-latex-base (2023.20240207-1) ... 149s Selecting previously unselected package texlive-bibtex-extra. 149s Preparing to unpack .../241-texlive-bibtex-extra_2023.20240207-1_all.deb ... 149s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 152s Selecting previously unselected package r-bioc-biocstyle. 152s Preparing to unpack .../242-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 152s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 152s Selecting previously unselected package r-bioc-sparsematrixstats. 152s Preparing to unpack .../243-r-bioc-sparsematrixstats_1.14.0+dfsg-1_arm64.deb ... 152s Unpacking r-bioc-sparsematrixstats (1.14.0+dfsg-1) ... 152s Selecting previously unselected package r-bioc-delayedmatrixstats. 152s Preparing to unpack .../244-r-bioc-delayedmatrixstats_1.24.0+ds-1_all.deb ... 152s Unpacking r-bioc-delayedmatrixstats (1.24.0+ds-1) ... 152s Selecting previously unselected package r-cran-bitops. 152s Preparing to unpack .../245-r-cran-bitops_1.0-7-1_arm64.deb ... 152s Unpacking r-cran-bitops (1.0-7-1) ... 152s Selecting previously unselected package r-cran-rcurl. 152s Preparing to unpack .../246-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 152s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 152s Selecting previously unselected package r-bioc-genomeinfodbdata. 152s Preparing to unpack .../247-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 152s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 152s Selecting previously unselected package r-bioc-genomeinfodb. 152s Preparing to unpack .../248-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 152s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 152s Selecting previously unselected package r-bioc-genomicranges. 152s Preparing to unpack .../249-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 152s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 152s Selecting previously unselected package r-bioc-summarizedexperiment. 152s Preparing to unpack .../250-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 152s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 152s Selecting previously unselected package r-bioc-singlecellexperiment. 152s Preparing to unpack .../251-r-bioc-singlecellexperiment_1.24.0+ds-1_all.deb ... 152s Unpacking r-bioc-singlecellexperiment (1.24.0+ds-1) ... 152s Selecting previously unselected package r-bioc-rhdf5lib. 152s Preparing to unpack .../252-r-bioc-rhdf5lib_1.24.2+dfsg-1_arm64.deb ... 152s Unpacking r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 152s Selecting previously unselected package r-bioc-rhdf5filters. 152s Preparing to unpack .../253-r-bioc-rhdf5filters_1.14.1+dfsg-3_arm64.deb ... 152s Unpacking r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 152s Selecting previously unselected package r-bioc-rhdf5. 152s Preparing to unpack .../254-r-bioc-rhdf5_2.46.1+dfsg-1_arm64.deb ... 152s Unpacking r-bioc-rhdf5 (2.46.1+dfsg-1) ... 152s Selecting previously unselected package r-bioc-hdf5array. 152s Preparing to unpack .../255-r-bioc-hdf5array_1.30.1-1_arm64.deb ... 152s Unpacking r-bioc-hdf5array (1.30.1-1) ... 152s Selecting previously unselected package r-cran-statmod. 152s Preparing to unpack .../256-r-cran-statmod_1.5.0-1_arm64.deb ... 152s Unpacking r-cran-statmod (1.5.0-1) ... 153s Selecting previously unselected package r-bioc-limma. 153s Preparing to unpack .../257-r-bioc-limma_3.58.1+dfsg-1_arm64.deb ... 153s Unpacking r-bioc-limma (3.58.1+dfsg-1) ... 153s Selecting previously unselected package r-cran-locfit. 153s Preparing to unpack .../258-r-cran-locfit_1.5-9.8-1_arm64.deb ... 153s Unpacking r-cran-locfit (1.5-9.8-1) ... 153s Selecting previously unselected package r-bioc-edger. 153s Preparing to unpack .../259-r-bioc-edger_4.0.16+dfsg-1_arm64.deb ... 153s Unpacking r-bioc-edger (4.0.16+dfsg-1) ... 153s Selecting previously unselected package r-cran-r.methodss3. 153s Preparing to unpack .../260-r-cran-r.methodss3_1.8.2-1_all.deb ... 153s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 153s Selecting previously unselected package r-cran-r.oo. 153s Preparing to unpack .../261-r-cran-r.oo_1.26.0-1_all.deb ... 153s Unpacking r-cran-r.oo (1.26.0-1) ... 153s Selecting previously unselected package r-cran-r.utils. 153s Preparing to unpack .../262-r-cran-r.utils_2.12.3-1_all.deb ... 153s Unpacking r-cran-r.utils (2.12.3-1) ... 153s Selecting previously unselected package r-cran-sitmo. 153s Preparing to unpack .../263-r-cran-sitmo_2.0.2-1_arm64.deb ... 153s Unpacking r-cran-sitmo (2.0.2-1) ... 153s Selecting previously unselected package r-cran-dqrng. 153s Preparing to unpack .../264-r-cran-dqrng_0.3.2+dfsg-1_arm64.deb ... 153s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 153s Selecting previously unselected package r-bioc-scuttle. 153s Preparing to unpack .../265-r-bioc-scuttle_1.12.0+dfsg-1_arm64.deb ... 153s Unpacking r-bioc-scuttle (1.12.0+dfsg-1) ... 153s Selecting previously unselected package r-bioc-dropletutils. 153s Preparing to unpack .../266-r-bioc-dropletutils_1.22.0+ds-1_arm64.deb ... 153s Unpacking r-bioc-dropletutils (1.22.0+ds-1) ... 153s Selecting previously unselected package r-cran-brio. 153s Preparing to unpack .../267-r-cran-brio_1.1.4-1_arm64.deb ... 153s Unpacking r-cran-brio (1.1.4-1) ... 153s Selecting previously unselected package r-cran-ps. 153s Preparing to unpack .../268-r-cran-ps_1.7.6-1_arm64.deb ... 153s Unpacking r-cran-ps (1.7.6-1) ... 153s Selecting previously unselected package r-cran-processx. 153s Preparing to unpack .../269-r-cran-processx_3.8.3-1_arm64.deb ... 153s Unpacking r-cran-processx (3.8.3-1) ... 153s Selecting previously unselected package r-cran-callr. 153s Preparing to unpack .../270-r-cran-callr_3.7.3-2_all.deb ... 153s Unpacking r-cran-callr (3.7.3-2) ... 153s Selecting previously unselected package r-cran-desc. 153s Preparing to unpack .../271-r-cran-desc_1.4.3-1_all.deb ... 153s Unpacking r-cran-desc (1.4.3-1) ... 153s Selecting previously unselected package r-cran-diffobj. 153s Preparing to unpack .../272-r-cran-diffobj_0.3.5-1_arm64.deb ... 153s Unpacking r-cran-diffobj (0.3.5-1) ... 153s Selecting previously unselected package r-cran-fansi. 153s Preparing to unpack .../273-r-cran-fansi_1.0.5-1_arm64.deb ... 153s Unpacking r-cran-fansi (1.0.5-1) ... 154s Selecting previously unselected package r-cran-utf8. 154s Preparing to unpack .../274-r-cran-utf8_1.2.4-1_arm64.deb ... 154s Unpacking r-cran-utf8 (1.2.4-1) ... 154s Selecting previously unselected package r-cran-pillar. 154s Preparing to unpack .../275-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 154s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 154s Selecting previously unselected package r-cran-pkgbuild. 154s Preparing to unpack .../276-r-cran-pkgbuild_1.4.3-1_all.deb ... 154s Unpacking r-cran-pkgbuild (1.4.3-1) ... 154s Selecting previously unselected package r-cran-pkgconfig. 154s Preparing to unpack .../277-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 154s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 154s Selecting previously unselected package r-cran-rprojroot. 154s Preparing to unpack .../278-r-cran-rprojroot_2.0.4-1_all.deb ... 154s Unpacking r-cran-rprojroot (2.0.4-1) ... 154s Selecting previously unselected package r-cran-pkgload. 154s Preparing to unpack .../279-r-cran-pkgload_1.3.4-1_all.deb ... 154s Unpacking r-cran-pkgload (1.3.4-1) ... 154s Selecting previously unselected package r-cran-praise. 154s Preparing to unpack .../280-r-cran-praise_1.0.0-4build1_all.deb ... 154s Unpacking r-cran-praise (1.0.0-4build1) ... 154s Selecting previously unselected package r-cran-tibble. 154s Preparing to unpack .../281-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 154s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 154s Selecting previously unselected package r-cran-rematch2. 154s Preparing to unpack .../282-r-cran-rematch2_2.1.2-2build1_all.deb ... 154s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 154s Selecting previously unselected package r-cran-waldo. 154s Preparing to unpack .../283-r-cran-waldo_0.5.2-1build1_all.deb ... 154s Unpacking r-cran-waldo (0.5.2-1build1) ... 154s Selecting previously unselected package r-cran-testthat. 154s Preparing to unpack .../284-r-cran-testthat_3.2.1-1_arm64.deb ... 154s Unpacking r-cran-testthat (3.2.1-1) ... 154s Selecting previously unselected package autopkgtest-satdep. 154s Preparing to unpack .../285-1-autopkgtest-satdep.deb ... 154s Unpacking autopkgtest-satdep (0) ... 154s Setting up libjs-json (0~20221030+~1.0.8-1) ... 154s Setting up javascript-common (11+nmu1) ... 154s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 155s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 155s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 155s Setting up libpaper1:arm64 (1.1.29) ... 155s 155s Creating config file /etc/papersize with new version 155s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 155s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 155s Setting up libxpm4:arm64 (1:3.5.17-1) ... 155s Setting up hdf5-helpers (1.10.10+repack-3ubuntu1) ... 155s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 155s Setting up libxi6:arm64 (2:1.8.1-1) ... 155s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 155s Setting up libdatrie1:arm64 (0.2.13-3) ... 155s Setting up libjs-popper.js (1.16.1+ds-6) ... 155s Setting up libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 155s Setting up libxcb-render0:arm64 (1.15-1) ... 155s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 155s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 155s Setting up libjs-lunr (2.3.9~dfsg-2) ... 155s Setting up unzip (6.0-28ubuntu3) ... 155s Setting up liblatex-tounicode-perl (0.54-2) ... 155s Setting up x11-common (1:7.7+23ubuntu2) ... 156s Setting up node-html5shiv (3.7.3+dfsg-5) ... 156s Setting up libpsl5t64:arm64 (0.21.2-1.1) ... 156s Setting up libdeflate0:arm64 (1.19-1) ... 156s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 156s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 156s Setting up libxcb-shm0:arm64 (1.15-1) ... 156s Setting up libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 156s Setting up libpaper-utils (1.1.29) ... 156s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 156s Setting up libjs-modernizr (2.6.2+ds1-5) ... 156s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 156s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 156s Setting up libaec0:arm64 (1.1.2-1) ... 156s Setting up libsnappy1v5:arm64 (1.1.10-1) ... 156s Setting up libjs-es5-shim (4.6.7-2) ... 156s Setting up tex-common (6.18) ... 156s update-language: texlive-base not installed and configured, doing nothing! 156s Setting up libio-string-perl (1.08-4) ... 156s Setting up zip (3.0-13) ... 156s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 156s Setting up libblas3:arm64 (3.12.0-3) ... 156s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 156s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 156s Setting up libpkgconf3:arm64 (1.8.1-2) ... 156s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 156s Setting up libteckit0:arm64 (2.5.12+ds1-1) ... 156s Setting up t1utils (1.41-4build2) ... 156s Setting up libtexlua53-5:arm64 (2023.20230311.66589-9) ... 156s Setting up libjs-d3 (3.5.17-4) ... 156s Setting up fonts-dejavu-mono (2.37-8) ... 156s Setting up libssl-dev:arm64 (3.0.13-0ubuntu1) ... 156s Setting up libpng16-16t64:arm64 (1.6.43-3) ... 156s Setting up libmpc3:arm64 (1.3.1-1) ... 156s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 156s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 156s Setting up icu-devtools (74.2-1ubuntu1) ... 156s Setting up fonts-dejavu-core (2.37-8) ... 156s Setting up pkgconf-bin (1.8.1-2) ... 156s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 156s Setting up libkpathsea6:arm64 (2023.20230311.66589-9) ... 156s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 156s Setting up libwebp7:arm64 (1.3.2-0.4) ... 156s Setting up libreadline8t64:arm64 (8.2-3.1) ... 156s Setting up liblzma-dev:arm64 (5.4.5-0.3) ... 156s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 156s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 156s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 156s Setting up libnsl-dev:arm64 (1.3.0-3) ... 156s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 156s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 156s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 156s Setting up libblosc1:arm64 (1.21.5+ds-1) ... 156s Setting up fonts-lmodern (2.005-1) ... 156s Setting up liblua5.4-0:arm64 (5.4.6-3) ... 156s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 156s Setting up libthai-data (0.1.29-2) ... 156s Setting up node-bootstrap-sass (3.4.3-2) ... 156s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 156s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 156s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 156s Setting up pandoc-data (3.1.3-1) ... 156s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 156s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 156s Setting up libisl23:arm64 (0.26-3) ... 156s Setting up libc-dev-bin (2.39-0ubuntu2) ... 156s Setting up node-normalize.css (8.0.1-5) ... 156s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 156s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 156s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 156s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 156s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 156s Setting up libblas-dev:arm64 (3.12.0-3) ... 156s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 156s Setting up libsz2:arm64 (1.1.2-1) ... 156s Setting up dctrl-tools (2.24-3build2) ... 156s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 156s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 156s Setting up libsynctex2:arm64 (2023.20230311.66589-9) ... 156s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 156s Setting up libpotrace0:arm64 (1.16-2) ... 156s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 156s Setting up libice6:arm64 (2:1.0.10-1build2) ... 156s Setting up liblapack3:arm64 (3.12.0-3) ... 156s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 156s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 156s Setting up libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 156s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 156s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 156s Setting up libaec-dev:arm64 (1.1.2-1) ... 156s Setting up libbibtex-parser-perl (1.04+dfsg-1) ... 156s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 156s Setting up pkgconf:arm64 (1.8.1-2) ... 156s Setting up libthai0:arm64 (0.1.29-2) ... 156s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 156s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 156s Setting up libptexenc1:arm64 (2023.20230311.66589-9) ... 156s Setting up pandoc (3.1.3+ds-2) ... 156s Setting up libcurl4-openssl-dev:arm64 (8.5.0-2ubuntu7) ... 156s Setting up liblapack-dev:arm64 (3.12.0-3) ... 156s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 156s Setting up pkg-config:arm64 (1.8.1-2) ... 156s Setting up libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 156s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 156s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 156s Setting up libhdf5-cpp-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 156s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 156s Setting up curl (8.5.0-2ubuntu7) ... 156s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 156s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 156s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 156s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 156s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 156s Setting up libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 156s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 156s Setting up fontconfig (2.15.0-1ubuntu1) ... 158s Regenerating fonts cache... done. 158s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 158s Setting up libxft2:arm64 (2.3.6-1) ... 158s Setting up libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 159s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 159s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 159s Setting up cpp-13 (13.2.0-17ubuntu2) ... 159s Setting up libtk8.6:arm64 (8.6.13-2) ... 159s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 159s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 159s Setting up libreadline-dev:arm64 (8.2-3.1) ... 159s Setting up libcairo2:arm64 (1.18.0-1) ... 159s Setting up libhdf5-hl-cpp-100:arm64 (1.10.10+repack-3ubuntu1) ... 159s Setting up libxt6t64:arm64 (1:1.2.1-1.2) ... 159s Setting up gcc-13 (13.2.0-17ubuntu2) ... 159s Setting up libhdf5-fortran-102:arm64 (1.10.10+repack-3ubuntu1) ... 159s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 159s Setting up cpp (4:13.2.0-7ubuntu1) ... 159s Setting up libhdf5-hl-fortran-100:arm64 (1.10.10+repack-3ubuntu1) ... 159s Setting up libboost-dev:arm64 (1.83.0.1ubuntu2) ... 159s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 159s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 159s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 159s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 159s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 159s Setting up g++-13 (13.2.0-17ubuntu2) ... 159s Setting up libxmu6:arm64 (2:1.1.3-3) ... 159s Setting up libpng-dev:arm64 (1.6.43-3) ... 159s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 159s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 159s Setting up libxaw7:arm64 (2:1.0.14-1) ... 159s Setting up gcc (4:13.2.0-7ubuntu1) ... 159s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 159s Setting up r-base-core (4.3.3-2build1) ... 159s 159s Creating config file /etc/R/Renviron with new version 159s Setting up r-cran-crayon (1.5.2-1) ... 159s Setting up libhdf5-dev (1.10.10+repack-3ubuntu1) ... 159s update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 159s Setting up r-cran-sourcetools (0.1.7-1-1) ... 159s Setting up r-cran-futile.options (1.0.1-3build1) ... 159s Setting up r-cran-lattice (0.22-5-1) ... 159s Setting up r-cran-ps (1.7.6-1) ... 159s Setting up r-cran-formatr (1.14-1) ... 159s Setting up r-cran-locfit (1.5-9.8-1) ... 159s Setting up texlive-binaries (2023.20230311.66589-9) ... 159s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 159s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 159s Setting up r-cran-statmod (1.5.0-1) ... 159s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 159s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 159s Setting up r-cran-commonmark (1.9.1-1) ... 159s Setting up r-cran-r6 (2.5.1-1) ... 159s Setting up r-cran-pkgkitten (0.2.3-1) ... 159s Setting up texlive-base (2023.20240207-1) ... 160s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 160s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 160s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 161s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 161s Setting up r-cran-magrittr (2.0.3-1) ... 161s Setting up r-cran-rappdirs (0.3.3-1) ... 161s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 161s Setting up r-cran-littler (0.3.19-1) ... 161s Setting up r-cran-bh (1.84.0-1) ... 161s Setting up r-cran-fs (1.6.3+dfsg-1) ... 161s Setting up r-cran-rcpp (1.0.12-1) ... 161s Setting up r-cran-codetools (0.2-19-1) ... 161s Setting up r-cran-brio (1.1.4-1) ... 161s Setting up r-cran-diffobj (0.3.5-1) ... 161s Setting up r-bioc-biocgenerics (0.48.1-2) ... 161s Setting up r-cran-rlang (1.1.3-1) ... 161s Setting up r-cran-matrixstats (1.2.0-1) ... 161s Setting up littler (0.3.19-1) ... 161s Setting up r-bioc-matrixgenerics (1.14.0-1) ... 161s Setting up r-cran-xfun (0.41+dfsg-1) ... 161s Setting up r-cran-withr (2.5.0-1) ... 161s Setting up r-cran-processx (3.8.3-1) ... 161s Setting up r-cran-mime (0.12-1) ... 161s Setting up r-cran-praise (1.0.0-4build1) ... 161s Setting up r-cran-base64enc (0.1-3-3) ... 161s Setting up r-cran-abind (1.4-5-2) ... 161s Setting up r-cran-digest (0.6.34-1) ... 161s Setting up r-cran-yaml (2.3.8-1) ... 161s Setting up r-cran-lambda.r (1.2.4-2build1) ... 161s Setting up r-cran-evaluate (0.23-1) ... 161s Setting up r-cran-highr (0.10+dfsg-1) ... 161s Setting up r-cran-fansi (1.0.5-1) ... 161s Setting up r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 161s Setting up r-cran-snow (1:0.4.4-2) ... 161s Setting up r-cran-glue (1.7.0-1) ... 161s Setting up r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 161s Setting up r-cran-xtable (1:1.8-4-2) ... 161s Setting up r-cran-cli (3.6.2-1) ... 161s Setting up gfortran (4:13.2.0-7ubuntu1) ... 161s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 161s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 161s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 161s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 161s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 161s Setting up r-cran-bitops (1.0-7-1) ... 161s Setting up r-cran-rprojroot (2.0.4-1) ... 161s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 161s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 161s Setting up r-cran-fastmap (1.1.1-1) ... 161s Setting up r-cran-r.methodss3 (1.8.2-1) ... 161s Setting up r-bioc-biobase (2.62.0-1) ... 161s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 161s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 161s Setting up r-cran-utf8 (1.2.4-1) ... 161s Setting up r-cran-stringi (1.8.3-1) ... 161s Setting up texlive-latex-base (2023.20240207-1) ... 161s Setting up r-cran-cpp11 (0.4.7-1) ... 161s Setting up r-cran-sitmo (2.0.2-1) ... 161s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 161s Setting up r-cran-futile.logger (1.4.3-4build1) ... 161s Setting up r-bioc-limma (3.58.1+dfsg-1) ... 161s Setting up r-cran-later (1.3.2+dfsg-1) ... 161s Setting up r-cran-matrix (1.6-5-1) ... 161s Setting up r-cran-tinytex (0.49-1) ... 161s Setting up r-cran-knitr (1.45+dfsg-1) ... 161s Setting up g++ (4:13.2.0-7ubuntu1) ... 161s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 161s Setting up r-cran-cachem (1.0.8-1) ... 161s Setting up build-essential (12.10ubuntu1) ... 161s Setting up r-bioc-iranges (2.36.0-1) ... 161s Setting up r-cran-dqrng (0.3.2+dfsg-1) ... 161s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 161s Setting up r-bioc-sparsematrixstats (1.14.0+dfsg-1) ... 161s Setting up r-cran-vctrs (0.6.5-1) ... 161s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 161s Setting up r-cran-ellipsis (0.3.2-2) ... 161s Setting up r-base-dev (4.3.3-2build1) ... 161s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 161s Setting up r-cran-stringr (1.5.1-1) ... 161s Setting up r-bioc-biocparallel (1.36.0-1) ... 161s Setting up r-cran-callr (3.7.3-2) ... 161s Setting up r-bioc-edger (4.0.16+dfsg-1) ... 161s Setting up r-cran-desc (1.4.3-1) ... 161s Setting up r-bioc-rhdf5 (2.46.1+dfsg-1) ... 161s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 161s Setting up r-cran-r.oo (1.26.0-1) ... 161s Setting up texlive-bibtex-extra (2023.20240207-1) ... 161s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 161s Setting up r-cran-memoise (2.0.1-1) ... 161s Setting up r-cran-promises (1.2.1+dfsg-1) ... 161s Setting up r-cran-htmltools (0.5.7-1) ... 161s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 161s Setting up r-bioc-xvector (0.42.0-1) ... 161s Setting up r-cran-pkgbuild (1.4.3-1) ... 161s Setting up r-cran-sass (0.4.8+dfsg-1) ... 161s Setting up r-cran-pkgload (1.3.4-1) ... 161s Setting up r-cran-r.utils (2.12.3-1) ... 161s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 161s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 161s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 161s Setting up r-cran-rematch2 (2.1.2-2build1) ... 161s Setting up r-cran-fontawesome (0.5.2-1) ... 161s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 161s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 161s Setting up r-cran-waldo (0.5.2-1build1) ... 161s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 161s Setting up r-bioc-hdf5array (1.30.1-1) ... 161s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 161s Setting up r-bioc-delayedmatrixstats (1.24.0+ds-1) ... 161s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 161s Setting up r-cran-testthat (3.2.1-1) ... 161s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 161s Setting up r-bioc-beachmat (2.18.1+ds-1) ... 161s Setting up r-cran-bookdown (0.37+dfsg-1) ... 161s Setting up r-bioc-singlecellexperiment (1.24.0+ds-1) ... 161s Setting up r-bioc-scuttle (1.12.0+dfsg-1) ... 161s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 161s Setting up r-bioc-dropletutils (1.22.0+ds-1) ... 161s Setting up autopkgtest-satdep (0) ... 161s Processing triggers for man-db (2.12.0-3) ... 163s Processing triggers for install-info (7.1-3) ... 163s Processing triggers for libc-bin (2.39-0ubuntu2) ... 163s Processing triggers for tex-common (6.18) ... 163s Running updmap-sys. This may take some time... done. 163s Running mktexlsr /var/lib/texmf ... done. 164s Building format(s) --all. 202s This may take some time... done. 216s (Reading database ... 123873 files and directories currently installed.) 216s Removing autopkgtest-satdep (0) ... 217s autopkgtest [17:32:24]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 217s autopkgtest [17:32:24]: test pkg-r-autopkgtest: [----------------------- 217s Test: Try to load the R library DropletUtils 218s 218s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 218s Copyright (C) 2024 The R Foundation for Statistical Computing 218s Platform: aarch64-unknown-linux-gnu (64-bit) 218s 218s R is free software and comes with ABSOLUTELY NO WARRANTY. 218s You are welcome to redistribute it under certain conditions. 218s Type 'license()' or 'licence()' for distribution details. 218s 218s R is a collaborative project with many contributors. 218s Type 'contributors()' for more information and 218s 'citation()' on how to cite R or R packages in publications. 218s 218s Type 'demo()' for some demos, 'help()' for on-line help, or 218s 'help.start()' for an HTML browser interface to help. 218s Type 'q()' to quit R. 218s 218s > library('DropletUtils') 218s Loading required package: SingleCellExperiment 218s Loading required package: SummarizedExperiment 218s Loading required package: MatrixGenerics 218s Loading required package: matrixStats 218s 218s Attaching package: ‘MatrixGenerics’ 218s 218s The following objects are masked from ‘package:matrixStats’: 218s 218s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 218s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 218s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 218s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 218s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 218s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 218s colWeightedMeans, colWeightedMedians, colWeightedSds, 218s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 218s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 218s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 218s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 218s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 218s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 218s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 218s rowWeightedSds, rowWeightedVars 218s 218s Loading required package: GenomicRanges 218s Loading required package: stats4 218s Loading required package: BiocGenerics 218s 218s Attaching package: ‘BiocGenerics’ 218s 218s The following objects are masked from ‘package:stats’: 218s 218s IQR, mad, sd, var, xtabs 218s 218s The following objects are masked from ‘package:base’: 218s 218s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 218s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 218s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 218s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 218s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 218s table, tapply, union, unique, unsplit, which.max, which.min 218s 218s Loading required package: S4Vectors 219s 219s Attaching package: ‘S4Vectors’ 219s 219s The following object is masked from ‘package:utils’: 219s 219s findMatches 219s 219s The following objects are masked from ‘package:base’: 219s 219s expand.grid, I, unname 219s 219s Loading required package: IRanges 219s Loading required package: GenomeInfoDb 220s Loading required package: Biobase 221s Welcome to Bioconductor 221s 221s Vignettes contain introductory material; view with 221s 'browseVignettes()'. To cite Bioconductor, see 221s 'citation("Biobase")', and for packages 'citation("pkgname")'. 221s 221s 221s Attaching package: ‘Biobase’ 221s 221s The following object is masked from ‘package:MatrixGenerics’: 221s 221s rowMedians 221s 221s The following objects are masked from ‘package:matrixStats’: 221s 221s anyMissing, rowMedians 221s 226s > 226s > 226s Other tests are currently unsupported! 226s They will be progressively added. 227s autopkgtest [17:32:34]: test pkg-r-autopkgtest: -----------------------] 228s pkg-r-autopkgtest PASS 228s autopkgtest [17:32:35]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 229s autopkgtest [17:32:36]: @@@@@@@@@@@@@@@@@@@@ summary 229s pkg-r-autopkgtest PASS 240s Creating nova instance adt-noble-arm64-r-bioc-dropletutils-20240316-172847-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...