0s autopkgtest [20:14:31]: starting date and time: 2024-03-20 20:14:31+0000 0s autopkgtest [20:14:31]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [20:14:31]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.l6fej9ik/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-bioc-rsamtools --apt-upgrade r-bioc-dexseq --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-bioc-rsamtools/2.18.0+dfsg-1build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-11.secgroup --name adt-noble-arm64-r-bioc-dexseq-20240320-201431-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 375s Creating nova instance adt-noble-arm64-r-bioc-dexseq-20240320-201431-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240320.img (UUID e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10)... 375s nova boot failed (attempt #1): 375s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader') 375s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader') 375s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken') 375s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth') 375s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password') 375s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token') 375s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password') 375s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP') 375s DEBUG (session:517) REQ: curl -g -i -X GET https://keystone.ps6.canonical.com:5000/v3 -H "Accept: application/json" -H "User-Agent: nova keystoneauth1/4.0.0 python-requests/2.22.0 CPython/3.8.10" 375s DEBUG (connectionpool:962) Starting new HTTPS connection (1): keystone.ps6.canonical.com:5000 375s DEBUG (connectionpool:429) https://keystone.ps6.canonical.com:5000 "GET /v3 HTTP/1.1" 200 267 375s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 267 Content-Type: application/json Date: Wed, 20 Mar 2024 20:14:55 GMT Keep-Alive: timeout=75, max=1000 Server: Apache/2.4.52 (Ubuntu) Vary: X-Auth-Token x-openstack-request-id: req-919ace4f-78f4-4d36-968e-32d0c96540d6 375s DEBUG (session:580) RESP BODY: {"version": {"id": "v3.14", "status": "stable", "updated": "2020-04-07T00:00:00Z", "links": [{"rel": "self", "href": "https://keystone.ps6.canonical.com:5000/v3/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.identity-v3+json"}]}} 375s DEBUG (session:946) GET call to https://keystone.ps6.canonical.com:5000/v3 used request id req-919ace4f-78f4-4d36-968e-32d0c96540d6 375s DEBUG (base:182) Making authentication request to https://keystone.ps6.canonical.com:5000/v3/auth/tokens 375s DEBUG (connectionpool:429) https://keystone.ps6.canonical.com:5000 "POST /v3/auth/tokens HTTP/1.1" 201 12445 375s DEBUG (base:187) {"token": {"methods": ["password"], "user": {"domain": {"id": "default", "name": "Default"}, "id": "369f50a481564a2c9433776a4ebd224d", "name": "prod-proposed-migration-arm64", "password_expires_at": null}, "audit_ids": ["Egc-Njv-QlmxkSJtFOKvPg"], "expires_at": "2024-03-21T20:14:55.000000Z", "issued_at": "2024-03-20T20:14:55.000000Z", "project": {"domain": {"id": "default", "name": "Default"}, "id": "bd8b3df3f03d43a0a9303b7c0434fdab", "name": "prod-proposed-migration-arm64_project"}, "is_domain": false, "roles": [{"id": "15cf997650e345b7b21c02b5cdb7d84a", "name": "member"}, {"id": "86bf3043974746c2bf52c2a9f362f986", "name": "reader"}], "is_admin_project": false, "catalog": [{"endpoints": [{"id": "213cdf38198c4581bd5b7d6d0836923b", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/", "region": "prodstack6"}, {"id": "67061eee26944a1a8009f9d07be19738", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/", "region": "prodstack6"}, {"id": "fc88c52c749a47d08a24a2c7efbde01b", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/", "region": "prodstack6"}], "id": "06e4714942634054bf9aa11715312b4e", "type": "s3", "name": "s3"}, {"endpoints": [{"id": "8aa44c94b63746bd9b37f1008ad55fa8", "interface": "admin", "region_id": "prodstack6", "url": "https://aodh-admin.ps6.canonical.com:8042", "region": "prodstack6"}, {"id": "92cf08a80a0242ebbca8ec893cf332b1", "interface": "public", "region_id": "prodstack6", "url": "https://aodh.ps6.canonical.com:8042", "region": "prodstack6"}, {"id": "d8139c6e11ae4edcb78981c12bd53212", "interface": "internal", "region_id": "prodstack6", "url": "https://aodh-internal.ps6.canonical.com:8042", "region": "prodstack6"}], "id": "2fb939b0b969435c8f0c5fa4edb4de94", "type": "alarming", "name": "aodh"}, {"endpoints": [{"id": "a49fcc80e658411885f88cdd8432a571", "interface": "internal", "region_id": "prodstack6", "url": "https://heat-internal.ps6.canonical.com:8000/v1", "region": "prodstack6"}, {"id": "b23866fddba8415885b06c064c34b94b", "interface": "public", "region_id": "prodstack6", "url": "https://heat.ps6.canonical.com:8000/v1", "region": "prodstack6"}, {"id": "f84ae55197f94b8392a678f35c82ca26", "interface": "admin", "region_id": "prodstack6", "url": "https://heat-admin.ps6.canonical.com:8000/v1", "region": "prodstack6"}], "id": "3d4b59f7dab644b2b527e8e96b697545", "type": "cloudformation", "name": "heat-cfn"}, {"endpoints": [{"id": "2e0143334c6241169f45f1c11970c6bc", "interface": "public", "region_id": "prodstack6", "url": "https://heat.ps6.canonical.com:8004/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "5e19c32243c04a3faf1e5f9ab900c260", "interface": "internal", "region_id": "prodstack6", "url": "https://heat-internal.ps6.canonical.com:8004/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "b3fc5c88ec8543a691fec75726b86967", "interface": "admin", "region_id": "prodstack6", "url": "https://heat-admin.ps6.canonical.com:8004/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "43b926205044476b8093b18d8ce0a9e4", "type": "orchestration", "name": "heat"}, {"endpoints": [{"id": "a47569b96e5b4146a312e4673504557c", "interface": "public", "region_id": "prodstack6", "url": "https://glance.ps6.canonical.com:9292", "region": "prodstack6"}, {"id": "bba35c4ab04f4114a2a34e65568537bd", "interface": "internal", "region_id": "prodstack6", "url": "https://glance-internal.ps6.canonical.com:9292", "region": "prodstack6"}, {"id": "ef769f1117c74a62a279131486c89628", "interface": "admin", "region_id": "prodstack6", "url": "https://glance-admin.ps6.canonical.com:9292", "region": "prodstack6"}], "id": "49de724549524bd78e9cd46a4477226f", "type": "image", "name": "glance"}, {"endpoints": [{"id": "a1a41e9a1e2d42e5b6cd5380cd1e21bf", "interface": "admin", "region_id": "prodstack6", "url": "https://cinder-admin.ps6.canonical.com:8776/v3/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "d2309a99724b4111827482c68a832c0c", "interface": "public", "region_id": "prodstack6", "url": "https://cinder.ps6.canonical.com:8776/v3/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "f8a02e3949ff42afa772eb5e74dbef9f", "interface": "internal", "region_id": "prodstack6", "url": "https://cinder-internal.ps6.canonical.com:8776/v3/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "5bf6578a631349e3af4bf36d7adb18e1", "type": "volumev3", "name": "cinderv3"}, {"endpoints": [{"id": "01d84128f36444e9b01549b86bd69116", "interface": "admin", "region_id": "prodstack6", "url": "https://barbican-admin.ps6.canonical.com:9312", "region": "prodstack6"}, {"id": "0ce4a8777e0b40a88f7fc0f77e34a605", "interface": "public", "region_id": "prodstack6", "url": "https://barbican.ps6.canonical.com:9311", "region": "prodstack6"}, {"id": "f507ba49e4a7435cb330234217c92449", "interface": "internal", "region_id": "prodstack6", "url": "https://barbican-internal.ps6.canonical.com:9311", "region": "prodstack6"}], "id": "62cb1c3d9f6c45979c13516a6b3ff114", "type": "key-manager", "name": "barbican"}, {"endpoints": [{"id": "3cb6121bd8f14da8aa2fba7be823a2b4", "interface": "internal", "region_id": "prodstack6", "url": "https://neutron-internal.ps6.canonical.com:9696", "region": "prodstack6"}, {"id": "46ba11d133fe4e8f9e8f9097ba737682", "interface": "admin", "region_id": "prodstack6", "url": "https://neutron-admin.ps6.canonical.com:9696", "region": "prodstack6"}, {"id": "d872eb6aa23d40009165aa3dcdce3948", "interface": "public", "region_id": "prodstack6", "url": "https://neutron.ps6.canonical.com:9696", "region": "prodstack6"}], "id": "759cb6fdfbc146dd8b9d1ba444c4b9db", "type": "network", "name": "neutron"}, {"endpoints": [{"id": "4349d565f72446da9699269f85df5e8b", "interface": "internal", "region_id": "prodstack6", "url": "https://manila-internal.ps6.canonical.com:8786/v2/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "a483dcc58f5e415e9ec739c94474e609", "interface": "public", "region_id": "prodstack6", "url": "https://manila.ps6.canonical.com:8786/v2/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "c1f14236723e42878562d8dd63d5a6a0", "interface": "admin", "region_id": "prodstack6", "url": "https://manila-admin.ps6.canonical.com:8786/v2/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "93fc4008035946deb1f433c2dd905a5d", "type": "sharev2", "name": "manilav2"}, {"endpoints": [{"id": "0fa148793c7249c8b187b6b4ff425731", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/swift/v1/AUTH_e4b04ca58d734ed0aa29e306adad4f79/simplestreams/data", "region": "prodstack6"}, {"id": "555ade266a6b4bcc81b6e5abf607aec5", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/swift/v1/AUTH_e4b04ca58d734ed0aa29e306adad4f79/simplestreams/data", "region": "prodstack6"}, {"id": "7dad1a7b1552465686424fc014463173", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/swift/simplestreams/data", "region": "prodstack6"}], "id": "977dd359af1a4fcc91a9daf4dc33b0f3", "type": "product-streams", "name": "image-stream"}, {"endpoints": [{"id": "12d30eabcdec4831bd15273d55b1cbab", "interface": "internal", "region_id": "prodstack6", "url": "https://manila-internal.ps6.canonical.com:8786/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "29d35b2b483346479f1ff1a13604d50e", "interface": "admin", "region_id": "prodstack6", "url": "https://manila-admin.ps6.canonical.com:8786/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "4aa1422b8f5945d8aed9ba6a8d670e5c", "interface": "public", "region_id": "prodstack6", "url": "https://manila.ps6.canonical.com:8786/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "ac5e4f28fa794cde99f1d7ffc1b664e5", "type": "share", "name": "manila"}, {"endpoints": [{"id": "c7db93d54a684d8caeae1d9e18a59118", "interface": "admin", "region_id": "prodstack6", "url": "https://nova-admin.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}, {"id": "dd7a796f401b477f9f1b5bbc05747d8d", "interface": "public", "region_id": "prodstack6", "url": "https://nova.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}, {"id": "e7ecb038d830462ea67b0b463af5e013", "interface": "internal", "region_id": "prodstack6", "url": "https://nova-internal.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}], "id": "b4519af08e174d4a8333a2d14ac3ba3b", "type": "compute", "name": "nova"}, {"endpoints": [{"id": "02ef5b6154934ffd97d8b5b8e4d70d2a", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/swift/v1/AUTH_bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "2741abe526e94842a4fa801423ba1ef0", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/swift/v1/AUTH_bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "3742f9406c604516933d6fd8c29e0880", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/swift", "region": "prodstack6"}], "id": "c7f07a7b3b3c408c96200dfd1d1a0f6f", "type": "object-store", "name": "swift"}, {"endpoints": [{"id": "06d4ed6c160a43f2b7fa7f80ad1dc709", "interface": "internal", "region_id": "prodstack6", "url": "https://designate-internal.ps6.canonical.com:9001", "region": "prodstack6"}, {"id": "1e240624a50c4ca0aaa6ef63cbc94f1b", "interface": "admin", "region_id": "prodstack6", "url": "https://designate-admin.ps6.canonical.com:9001", "region": "prodstack6"}, {"id": "f94d7d17997a43fd9c63b34c43301c6e", "interface": "public", "region_id": "prodstack6", "url": "https://designate.ps6.canonical.com:9001", "region": "prodstack6"}], "id": "cf82013d63844fedbe96bcacb6bd1fef", "type": "dns", "name": "designate"}, {"endpoints": [{"id": "4a688340be464710bfa60bf3f88f41c4", "interface": "admin", "region_id": "prodstack6", "url": "https://gnocchi-admin.ps6.canonical.com:8041", "region": "prodstack6"}, {"id": "a5a95506c96d4716adb4efc3ac9051be", "interface": "public", "region_id": "prodstack6", "url": "https://gnocchi.ps6.canonical.com:8041", "region": "prodstack6"}, {"id": "eebc17a086834f8fa8bb6b35c8061a8c", "interface": "internal", "region_id": "prodstack6", "url": "https://gnocchi-internal.ps6.canonical.com:8041", "region": "prodstack6"}], "id": "d10589e854a446a5b852593f33f170a7", "type": "metric", "name": "gnocchi"}, {"endpoints": [{"id": "08f66df28d0f47f3bec12f29e06d85ac", "interface": "admin", "region_id": "prodstack6", "url": "https://keystone-admin.ps6.canonical.com:35357/v3", "region": "prodstack6"}, {"id": "46d270b45ceb42db902f4d241afa6a70", "interface": "public", "region_id": "prodstack6", "url": "https://keystone.ps6.canonical.com:5000/v3", "region": "prodstack6"}, {"id": "a4addee11d9349cfa46ec6660dbad947", "interface": "internal", "region_id": "prodstack6", "url": "https://keystone-internal.ps6.canonical.com:5000/v3", "region": "prodstack6"}], "id": "deb38a775a9b4e87a8de9e3eed779882", "type": "identity", "name": "keystone"}, {"endpoints": [{"id": "18b4af5f40664babb94e884c6a53ccf3", "interface": "admin", "region_id": "prodstack6", "url": "https://octavia-admin.ps6.canonical.com:9876", "region": "prodstack6"}, {"id": "2b6f7ba7f9944ee1aebd6dccc5223b2d", "interface": "internal", "region_id": "prodstack6", "url": "https://octavia-internal.ps6.canonical.com:9876", "region": "prodstack6"}, {"id": "5e3012e9c79e4890be4d964b6208f5c6", "interface": "public", "region_id": "prodstack6", "url": "https://octavia.ps6.canonical.com:9876", "region": "prodstack6"}], "id": "e00337be20d54948b66a1c3109b885c6", "type": "load-balancer", "name": "octavia"}, {"endpoints": [{"id": "2d2942b35f3041389ad810f679d02f22", "interface": "public", "region_id": "prodstack6", "url": "https://placement.ps6.canonical.com:8778", "region": "prodstack6"}, {"id": "2e3beaac7ac14284b72e2592820ad725", "interface": "admin", "region_id": "prodstack6", "url": "https://placement-admin.ps6.canonical.com:8778", "region": "prodstack6"}, {"id": "91060f6df9ae444f81808adf40540d94", "interface": "internal", "region_id": "prodstack6", "url": "https://placement-internal.ps6.canonical.com:8778", "region": "prodstack6"}], "id": "edc6e37f154f4c0ab3dd4d52b82bf873", "type": "placement", "name": "placement"}]}} 375s REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}01eebfe32c2d7b482ae2438033f87df9e1eebca25d8a52b797b8c171112942d3" 375s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}01eebfe32c2d7b482ae2438033f87df9e1eebca25d8a52b797b8c171112942d3" 375s DEBUG (connectionpool:962) Starting new HTTPS connection (1): nova.ps6.canonical.com:8774 375s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1 HTTP/1.1" 302 0 375s RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Wed, 20 Mar 2024 20:14:55 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps6.canonical.com:8774/v2.1/ Server: Apache/2.4.52 (Ubuntu) x-compute-request-id: req-8aa5f9d9-2c91-4fa0-a6de-bb38e5621c05 x-openstack-request-id: req-8aa5f9d9-2c91-4fa0-a6de-bb38e5621c05 375s DEBUG (session:548) RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Wed, 20 Mar 2024 20:14:55 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps6.canonical.com:8774/v2.1/ Server: Apache/2.4.52 (Ubuntu) x-compute-request-id: req-8aa5f9d9-2c91-4fa0-a6de-bb38e5621c05 x-openstack-request-id: req-8aa5f9d9-2c91-4fa0-a6de-bb38e5621c05 375s RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged. 375s DEBUG (session:580) RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged. 375s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/ HTTP/1.1" 200 397 375s RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Wed, 20 Mar 2024 20:14:55 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-ce3a8e7e-632b-4441-99d0-4a91ba791247 x-openstack-request-id: req-ce3a8e7e-632b-4441-99d0-4a91ba791247 375s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Wed, 20 Mar 2024 20:14:55 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-ce3a8e7e-632b-4441-99d0-4a91ba791247 x-openstack-request-id: req-ce3a8e7e-632b-4441-99d0-4a91ba791247 375s RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.90", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}} 375s DEBUG (session:580) RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.90", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}} 375s GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/ used request id req-ce3a8e7e-632b-4441-99d0-4a91ba791247 375s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/ used request id req-ce3a8e7e-632b-4441-99d0-4a91ba791247 375s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader') 375s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader') 375s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken') 375s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth') 375s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password') 375s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token') 375s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password') 375s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth') 375s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP') 375s DEBUG (session:517) REQ: curl -g -i -X GET https://glance.ps6.canonical.com:9292/v2/images/e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}01eebfe32c2d7b482ae2438033f87df9e1eebca25d8a52b797b8c171112942d3" -H "X-OpenStack-Nova-API-Version: 2.87" 375s DEBUG (connectionpool:962) Starting new HTTPS connection (1): glance.ps6.canonical.com:9292 375s DEBUG (connectionpool:429) https://glance.ps6.canonical.com:9292 "GET /v2/images/e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10 HTTP/1.1" 200 1935 375s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 1935 Content-Type: application/json Date: Wed, 20 Mar 2024 20:14:56 GMT Keep-Alive: timeout=75, max=1000 Server: Apache/2.4.52 (Ubuntu) X-Openstack-Request-Id: req-0777fa53-18f2-4905-a6dd-b3594708342c 375s DEBUG (session:580) RESP BODY: {"base_image_ref": "09c3944a-cd0d-425d-b22f-cde7ec51d155", "boot_roles": "member,reader", "hw_cdrom_bus": "scsi", "hw_disk_bus": "virtio", "hw_machine_type": "virt", "hw_video_model": "virtio", "hw_vif_model": "virtio", "image_location": "snapshot", "image_state": "available", "image_type": "snapshot", "instance_uuid": "920ee14c-c8c5-41fd-812c-8e130e09788e", "owner_id": "bd8b3df3f03d43a0a9303b7c0434fdab", "owner_project_name": "prod-proposed-migration-arm64_project", "owner_specified.openstack.md5": "087a26f2222dab8516c553374a9d1b4d", "owner_specified.openstack.object": "images/adt/ubuntu-noble-arm64-server-20240201.img", "owner_specified.openstack.sha256": "095b278df09de76f01843de514daf3f8eb0a0cc67fee4b3491161913153619db", "owner_user_name": "prod-proposed-migration-arm64", "user_id": "369f50a481564a2c9433776a4ebd224d", "name": "adt/ubuntu-noble-arm64-server-20240320.img", "disk_format": "qcow2", "container_format": "bare", "visibility": "private", "size": 2233663488, "virtual_size": 21474836480, "status": "active", "checksum": "13f6175a85e456b7dc704e6e426983e0", "protected": false, "min_ram": 0, "min_disk": 20, "owner": "bd8b3df3f03d43a0a9303b7c0434fdab", "os_hidden": false, "os_hash_algo": "sha512", "os_hash_value": "7dc04a985ebd4389017209871b71a2a025a877d450213a845709e0fc3e04e1434dcb1ebc59a869784265bb5df648efc736c422a7e2bb537f6a1397df0ed392cc", "id": "e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10", "created_at": "2024-03-20T10:06:23Z", "updated_at": "2024-03-20T10:06:47Z", "locations": [{"url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10/snap", "metadata": {"store": "ceph"}}], "direct_url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10/snap", "tags": [], "self": "/v2/images/e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10", "file": "/v2/images/e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10/file", "schema": "/v2/schemas/image", "stores": "ceph"} 375s DEBUG (session:936) GET call to image for https://glance.ps6.canonical.com:9292/v2/images/e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10 used request id req-0777fa53-18f2-4905-a6dd-b3594708342c 375s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors/autopkgtest -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}01eebfe32c2d7b482ae2438033f87df9e1eebca25d8a52b797b8c171112942d3" -H "X-OpenStack-Nova-API-Version: 2.87" 375s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors/autopkgtest HTTP/1.1" 404 84 375s DEBUG (session:548) RESP: [404] Connection: Keep-Alive Content-Length: 84 Content-Type: application/json; charset=UTF-8 Date: Wed, 20 Mar 2024 20:14:56 GMT Keep-Alive: timeout=75, max=998 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-c8cc5bf9-cd28-46a1-b97b-08b2a8601aa9 x-openstack-request-id: req-c8cc5bf9-cd28-46a1-b97b-08b2a8601aa9 375s DEBUG (session:580) RESP BODY: {"itemNotFound": {"code": 404, "message": "Flavor autopkgtest could not be found."}} 375s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors/autopkgtest used request id req-c8cc5bf9-cd28-46a1-b97b-08b2a8601aa9 375s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors?is_public=None -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}01eebfe32c2d7b482ae2438033f87df9e1eebca25d8a52b797b8c171112942d3" -H "X-OpenStack-Nova-API-Version: 2.87" 375s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors?is_public=None HTTP/1.1" 200 1739 375s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 1739 Content-Type: application/json Date: Wed, 20 Mar 2024 20:14:56 GMT Keep-Alive: timeout=75, max=997 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-2a3c29c3-1c64-4edb-9aa0-e83f09266cbb x-openstack-request-id: req-2a3c29c3-1c64-4edb-9aa0-e83f09266cbb 375s DEBUG (session:580) RESP BODY: {"flavors": [{"id": "062428d9-35a1-461f-a33a-38436ed516b4", "name": "autopkgtest-cpu8-ram16-disk160-arm64", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/062428d9-35a1-461f-a33a-38436ed516b4"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/062428d9-35a1-461f-a33a-38436ed516b4"}], "description": null}, {"id": "8d27c5f0-65c7-4018-b3f7-50463875ab09", "name": "autopkgtest", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}], "description": null}, {"id": "8ebe34fb-1390-4cc7-bbe5-0d38c80f2fb4", "name": "autopkgtest-cpu2-ram4-disk20-arm64", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/8ebe34fb-1390-4cc7-bbe5-0d38c80f2fb4"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/8ebe34fb-1390-4cc7-bbe5-0d38c80f2fb4"}], "description": null}, {"id": "a8256f9e-53ee-4584-ad7f-60e088825b83", "name": "autopkgtest-big", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/a8256f9e-53ee-4584-ad7f-60e088825b83"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/a8256f9e-53ee-4584-ad7f-60e088825b83"}], "description": null}, {"id": "cfc564ac-9f6e-4477-91c4-a89ccb4b744e", "name": "autopkgtest-cpu4-ram8-disk100-arm64", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/cfc564ac-9f6e-4477-91c4-a89ccb4b744e"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/cfc564ac-9f6e-4477-91c4-a89ccb4b744e"}], "description": null}]} 375s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors?is_public=None used request id req-2a3c29c3-1c64-4edb-9aa0-e83f09266cbb 375s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}01eebfe32c2d7b482ae2438033f87df9e1eebca25d8a52b797b8c171112942d3" -H "X-OpenStack-Nova-API-Version: 2.87" 375s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09 HTTP/1.1" 200 613 375s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 613 Content-Type: application/json Date: Wed, 20 Mar 2024 20:14:56 GMT Keep-Alive: timeout=75, max=996 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-809f92d1-853f-4a5a-96db-2623ad5df296 x-openstack-request-id: req-809f92d1-853f-4a5a-96db-2623ad5df296 375s DEBUG (session:580) RESP BODY: {"flavor": {"id": "8d27c5f0-65c7-4018-b3f7-50463875ab09", "name": "autopkgtest", "ram": 4096, "disk": 20, "swap": 0, "OS-FLV-EXT-DATA:ephemeral": 0, "OS-FLV-DISABLED:disabled": false, "vcpus": 2, "os-flavor-access:is_public": false, "rxtx_factor": 1.0, "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}], "description": null, "extra_specs": {"aggregate_instance_extra_specs:commit": "builder-arm64", "hw_rng:allowed": "True"}}} 375s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09 used request id req-809f92d1-853f-4a5a-96db-2623ad5df296 375s DEBUG (session:517) REQ: curl -g -i -X POST https://nova.ps6.canonical.com:8774/v2.1/servers -H "Accept: application/json" -H "Content-Type: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}01eebfe32c2d7b482ae2438033f87df9e1eebca25d8a52b797b8c171112942d3" -H "X-OpenStack-Nova-API-Version: 2.87" -d '{"server": {"name": "adt-noble-arm64-r-bioc-dexseq-20240320-201431-juju-7f2275-prod-proposed-migration-environment-3", "imageRef": "e0f61a12-2f1c-4e49-a68b-f68d2ad5dd10", "flavorRef": "8d27c5f0-65c7-4018-b3f7-50463875ab09", "user_data": "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", "key_name": "testbed-juju-7f2275-prod-proposed-migration-environment-3", "min_count": 1, "max_count": 1, "security_groups": [{"name": "autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-11.secgroup"}], "networks": [{"uuid": "6ea4839c-9760-4b54-ab7d-70a6312667d1"}]}}' 375s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "POST /v2.1/servers HTTP/1.1" 403 115 375s DEBUG (session:548) RESP: [403] Connection: Keep-Alive Content-Length: 115 Content-Type: application/json; charset=UTF-8 Date: Wed, 20 Mar 2024 20:14:56 GMT Keep-Alive: timeout=75, max=995 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-72f27e55-014e-4ff7-a91d-71cc8f33f030 x-openstack-request-id: req-72f27e55-014e-4ff7-a91d-71cc8f33f030 375s DEBUG (session:580) RESP BODY: {"forbidden": {"code": 403, "message": "Quota exceeded for cores: Requested 2, but already used 140 of 140 cores"}} 375s DEBUG (session:936) POST call to compute for https://nova.ps6.canonical.com:8774/v2.1/servers used request id req-72f27e55-014e-4ff7-a91d-71cc8f33f030 375s DEBUG (shell:822) Quota exceeded for cores: Requested 2, but already used 140 of 140 cores (HTTP 403) (Request-ID: req-72f27e55-014e-4ff7-a91d-71cc8f33f030) 375s Traceback (most recent call last): 375s File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 820, in main 375s OpenStackComputeShell().main(argv) 375s File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 742, in main 375s args.func(self.cs, args) 375s File "/usr/lib/python3/dist-packages/novaclient/v2/shell.py", line 971, in do_boot 375s server = cs.servers.create(*boot_args, **boot_kwargs) 375s File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 1477, in create 375s return self._boot(response_key, *boot_args, **boot_kwargs) 375s File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 836, in _boot 375s return self._create('/servers', body, response_key, 375s File "/usr/lib/python3/dist-packages/novaclient/base.py", line 363, in _create 375s resp, body = self.api.client.post(url, body=body) 375s File "/usr/lib/python3/dist-packages/keystoneauth1/adapter.py", line 392, in post 375s return self.request(url, 'POST', **kwargs) 375s File "/usr/lib/python3/dist-packages/novaclient/client.py", line 78, in request 375s raise exceptions.from_response(resp, body, url, method) 375s novaclient.exceptions.Forbidden: Quota exceeded for cores: Requested 2, but already used 140 of 140 cores (HTTP 403) (Request-ID: req-72f27e55-014e-4ff7-a91d-71cc8f33f030) 375s ERROR (Forbidden): Quota exceeded for cores: Requested 2, but already used 140 of 140 cores (HTTP 403) (Request-ID: req-72f27e55-014e-4ff7-a91d-71cc8f33f030) 378s autopkgtest [20:20:48]: testbed dpkg architecture: arm64 378s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 378s autopkgtest [20:20:49]: testbed apt version: 2.7.12 378s autopkgtest [20:20:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 379s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3808 kB] 379s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 379s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 379s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [502 kB] 379s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [698 kB] 379s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 379s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [41.7 kB] 379s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 379s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4228 kB] 379s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 379s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [67.6 kB] 379s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 381s Fetched 9534 kB in 2s (5208 kB/s) 381s Reading package lists... 384s Reading package lists... 384s Building dependency tree... 384s Reading state information... 385s Calculating upgrade... 385s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 385s Reading package lists... 386s Building dependency tree... 386s Reading state information... 386s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 387s sh: Attempting to set up Debian/Ubuntu apt sources automatically 387s sh: Distribution appears to be Ubuntu 388s Reading package lists... 388s Building dependency tree... 388s Reading state information... 390s eatmydata is already the newest version (131-1). 390s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 390s Reading package lists... 390s Building dependency tree... 390s Reading state information... 390s dbus is already the newest version (1.14.10-4ubuntu1). 390s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 390s Reading package lists... 390s Building dependency tree... 390s Reading state information... 390s rng-tools-debian is already the newest version (2.4). 390s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 390s Reading package lists... 390s Building dependency tree... 390s Reading state information... 391s The following packages will be REMOVED: 391s cloud-init* python3-configobj* python3-debconf* 391s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 391s After this operation, 3252 kB disk space will be freed. 392s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 392s Removing cloud-init (24.1.1-0ubuntu1) ... 392s Removing python3-configobj (5.0.8-3) ... 392s Removing python3-debconf (1.5.86) ... 393s Processing triggers for man-db (2.12.0-3) ... 394s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74369 files and directories currently installed.) 394s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 394s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 394s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 394s invoke-rc.d: policy-rc.d denied execution of try-restart. 395s Reading package lists... 395s Building dependency tree... 395s Reading state information... 395s linux-generic is already the newest version (6.8.0-11.11+1). 395s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 396s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 396s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 396s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 398s Reading package lists... 398s Reading package lists... 398s Building dependency tree... 398s Reading state information... 399s Calculating upgrade... 399s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 399s Reading package lists... 400s Building dependency tree... 400s Reading state information... 400s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 401s autopkgtest [20:21:12]: rebooting testbed after setup commands that affected boot 558s autopkgtest [20:23:49]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 561s autopkgtest [20:23:52]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-dexseq 563s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-dexseq 1.48.0+dfsg-1 (dsc) [2415 B] 563s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-dexseq 1.48.0+dfsg-1 (tar) [50.4 kB] 563s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-dexseq 1.48.0+dfsg-1 (diff) [2920 B] 564s gpgv: Signature made Fri Dec 1 06:39:45 2023 UTC 564s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 564s gpgv: issuer "tillea@rki.de" 564s gpgv: Can't check signature: No public key 564s dpkg-source: warning: cannot verify inline signature for ./r-bioc-dexseq_1.48.0+dfsg-1.dsc: no acceptable signature found 564s autopkgtest [20:23:55]: testing package r-bioc-dexseq version 1.48.0+dfsg-1 565s autopkgtest [20:23:56]: build not needed 572s autopkgtest [20:24:03]: test pkg-r-autopkgtest: preparing testbed 577s Reading package lists... 578s Building dependency tree... 578s Reading state information... 578s Starting pkgProblemResolver with broken count: 0 578s Starting 2 pkgProblemResolver with broken count: 0 578s Done 579s The following additional packages will be installed: 579s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 579s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 579s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 579s g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 579s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 579s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu hdf5-helpers 579s icu-devtools javascript-common libaec-dev libaec0 libasan8 libatomic1 579s libbibtex-parser-perl libblas-dev libblas3 libblosc1 libboost-dev 579s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 579s libcrypt-dev libcurl4-openssl-dev libdatrie1 libdeflate0 libfontconfig1 579s libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 579s libharfbuzz0b libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev 579s libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 579s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 579s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 579s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 579s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 579s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 579s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 579s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 579s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 579s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 579s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 579s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 579s libpotrace0 libptexenc1 libreadline-dev libsharpyuv0 libsm6 libsnappy1v5 579s libssl-dev libstdc++-13-dev libsynctex2 libsz2 libtcl8.6 libteckit0 579s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 579s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 579s libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 579s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 579s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 579s r-bioc-annotate r-bioc-annotationdbi r-bioc-beachmat r-bioc-biobase 579s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 579s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-delayedarray 579s r-bioc-delayedmatrixstats r-bioc-deseq2 r-bioc-dexseq r-bioc-genefilter 579s r-bioc-geneplotter r-bioc-genomeinfodb r-bioc-genomeinfodbdata 579s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 579s r-bioc-glmgampoi r-bioc-hdf5array r-bioc-iranges r-bioc-keggrest 579s r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib 579s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 579s r-bioc-s4vectors r-bioc-singlecellexperiment r-bioc-sparsearray 579s r-bioc-sparsematrixstats r-bioc-summarizedexperiment r-bioc-xvector 579s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh 579s r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 579s r-cran-bookdown r-cran-brew r-cran-brio r-cran-bslib r-cran-cachem 579s r-cran-callr r-cran-cli r-cran-codetools r-cran-colorspace r-cran-commonmark 579s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-desc 579s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate 579s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 579s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 579s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 579s r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-hwriter 579s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 579s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler 579s r-cran-locfit r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 579s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 579s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 579s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise 579s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 579s r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 579s r-cran-rcpparmadillo r-cran-rcurl r-cran-rematch2 r-cran-restfulr 579s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-roxygen2 r-cran-rprojroot 579s r-cran-rsqlite r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 579s r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr 579s r-cran-survival r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidyr 579s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-viridislite 579s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable 579s r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 579s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 579s xdg-utils zip zlib1g-dev 579s Suggested packages: 579s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 579s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 579s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 579s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 579s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 579s libboost-context1.83-dev libboost-contract1.83-dev 579s libboost-coroutine1.83-dev libboost-date-time1.83-dev 579s libboost-exception1.83-dev libboost-fiber1.83-dev 579s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 579s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 579s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 579s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 579s libboost-numpy1.83-dev libboost-program-options1.83-dev 579s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 579s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 579s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 579s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 579s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 579s glibc-doc libcurl4-doc libidn-dev libkrb5-dev libldap2-dev librtmp-dev 579s libssh2-1-dev libhdf5-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras 579s fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libssl-doc 579s libstdc++-13-doc tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex 579s texlive-luatex pandoc-citeproc texlive-latex-extra context wkhtmltopdf 579s librsvg2-bin groff ghc php python ruby libjs-katex 579s citation-style-language-styles elpa-ess r-doc-info | r-doc-pdf r-mathlib 579s r-base-html texlive-plain-generic texlive-fonts-recommended 579s texlive-fonts-extra texlive-extra-utils texinfo r-bioc-go.db 579s r-bioc-org.hs.eg.db r-cran-runit r-bioc-graph r-cran-rcmdcheck r-bioc-all 579s r-bioc-affy r-cran-foreach r-cran-bbmisc r-cran-doparallel 579s r-bioc-variantannotation r-bioc-shortread r-cran-batchtools 579s r-cran-data.table r-cran-mockery r-cran-webmockr r-bioc-bsgenome 579s r-cran-lobstr r-cran-profmem r-cran-pheatmap r-bioc-tximport r-bioc-tximeta 579s r-bioc-tximportdata r-cran-readr r-cran-pbapply r-cran-class r-cran-r.utils 579s r-bioc-edger r-bioc-ensembldb r-bioc-annotationfilter r-cran-markdown 579s r-bioc-gviz r-bioc-annotationhub r-cran-zoo r-bioc-limma r-cran-bench 579s r-bioc-scran r-bioc-experimenthub r-cran-tinytest r-bioc-scrnaseq 579s r-cran-rtsne r-cran-ff r-cran-covr r-cran-spelling r-cran-kernsmooth 579s r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-jpeg 579s r-cran-viridis r-cran-rstudioapi r-cran-rmysql r-cran-lubridate 579s r-cran-magick r-cran-sf r-cran-getopt r-cran-interp r-cran-gam 579s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-units 579s r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer r-cran-here 579s r-cran-plm debhelper ghostscript gv | postscript-viewer perl-tk xpdf 579s | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc 579s wp2latex 579s Recommended packages: 579s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 579s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-downlit 579s r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui r-cran-rsconnect 579s r-cran-testit r-cran-tufte r-cran-webshot r-cran-covr r-cran-thematic 579s r-cran-cliapp r-cran-mockery r-cran-whoami r-cran-bench r-cran-decor 579s r-cran-lobstr r-cran-spelling r-cran-webutils r-cran-rpostgresql r-cran-gh 579s r-cran-broom r-cran-rmysql r-cran-unitizer r-cran-rsvg r-cran-hexbin 579s r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis 579s r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite 579s r-cran-vdiffr r-cran-cairo r-cran-markdown r-cran-jpeg r-cran-readr 579s r-cran-r.rsp r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl 579s r-cran-tikzdevice node-highlight.js r-cran-lintr r-cran-tidyverse 579s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-mathjaxr r-cran-mockr 579s r-cran-webfakes r-cran-future r-cran-pingr r-cran-runit r-cran-usethis 579s r-cran-dygraphs r-cran-r.methodss3 r-cran-r.oo r-cran-dbitest r-cran-gert 579s r-cran-rvest r-cran-dichromat r-cran-data.table r-cran-formattable 579s r-cran-pkgdown r-cran-zeallot r-cran-renv lmodern dvisvgm 579s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 579s x11-xserver-utils 579s The following NEW packages will be installed: 579s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 579s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 579s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 579s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 579s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 579s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 579s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu hdf5-helpers 579s icu-devtools javascript-common libaec-dev libaec0 libasan8 libatomic1 579s libbibtex-parser-perl libblas-dev libblas3 libblosc1 libboost-dev 579s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 579s libcrypt-dev libcurl4-openssl-dev libdatrie1 libdeflate0 libfontconfig1 579s libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 579s libharfbuzz0b libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev 579s libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 579s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 579s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 579s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 579s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 579s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 579s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 579s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 579s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 579s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 579s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 579s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 579s libpotrace0 libptexenc1 libreadline-dev libsharpyuv0 libsm6 libsnappy1v5 579s libssl-dev libstdc++-13-dev libsynctex2 libsz2 libtcl8.6 libteckit0 579s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 579s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 579s libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 579s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 579s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 579s r-bioc-annotate r-bioc-annotationdbi r-bioc-beachmat r-bioc-biobase 579s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 579s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-delayedarray 579s r-bioc-delayedmatrixstats r-bioc-deseq2 r-bioc-dexseq r-bioc-genefilter 579s r-bioc-geneplotter r-bioc-genomeinfodb r-bioc-genomeinfodbdata 579s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 579s r-bioc-glmgampoi r-bioc-hdf5array r-bioc-iranges r-bioc-keggrest 579s r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib 579s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 579s r-bioc-s4vectors r-bioc-singlecellexperiment r-bioc-sparsearray 579s r-bioc-sparsematrixstats r-bioc-summarizedexperiment r-bioc-xvector 579s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh 579s r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 579s r-cran-bookdown r-cran-brew r-cran-brio r-cran-bslib r-cran-cachem 579s r-cran-callr r-cran-cli r-cran-codetools r-cran-colorspace r-cran-commonmark 579s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-desc 579s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate 579s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 579s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 579s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 579s r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-hwriter 579s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 579s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler 579s r-cran-locfit r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 579s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 579s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 579s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise 579s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 579s r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 579s r-cran-rcpparmadillo r-cran-rcurl r-cran-rematch2 r-cran-restfulr 579s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-roxygen2 r-cran-rprojroot 579s r-cran-rsqlite r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 579s r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr 579s r-cran-survival r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidyr 579s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-viridislite 579s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable 579s r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 579s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 579s xdg-utils zip zlib1g-dev 579s 0 upgraded, 337 newly installed, 0 to remove and 0 not upgraded. 579s Need to get 473 MB/473 MB of archives. 579s After this operation, 1464 MB of additional disk space will be used. 579s Get:1 /tmp/autopkgtest.zF037m/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [808 B] 579s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 579s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 579s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 580s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 580s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 580s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 580s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 580s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 580s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 580s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 581s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 581s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 581s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 581s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 581s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 581s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 581s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 581s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 581s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 581s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 581s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 581s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 581s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 581s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 582s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 582s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 582s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 582s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 582s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 582s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 582s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 582s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 582s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 582s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 582s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 582s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 582s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 582s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 582s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 582s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 582s Get:42 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 582s Get:43 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 582s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 582s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 582s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 582s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 583s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 583s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 583s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 583s Get:51 http://ftpmaster.internal/ubuntu noble/universe arm64 hdf5-helpers arm64 1.10.10+repack-3ubuntu1 [15.5 kB] 583s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 583s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 583s Get:54 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 583s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 583s Get:56 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 583s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 583s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 583s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 583s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libsnappy1v5 arm64 1.1.10-1 [28.2 kB] 583s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 libblosc1 arm64 1.21.5+ds-1 [25.5 kB] 583s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 583s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 583s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 583s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 583s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 583s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 583s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 583s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 583s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libcurl4-openssl-dev arm64 8.5.0-2ubuntu2 [454 kB] 583s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 583s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 583s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 583s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 583s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 583s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.10+repack-3ubuntu1 [1189 kB] 583s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-cpp-103-1 arm64 1.10.10+repack-3ubuntu1 [120 kB] 583s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-fortran-102 arm64 1.10.10+repack-3ubuntu1 [86.3 kB] 583s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB] 583s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-fortran-100 arm64 1.10.10+repack-3ubuntu1 [30.7 kB] 583s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-cpp-100 arm64 1.10.10+repack-3ubuntu1 [10.7 kB] 583s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 583s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 583s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 583s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 583s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 583s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 583s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec-dev arm64 1.1.2-1 [18.8 kB] 583s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libssl-dev arm64 3.0.10-1ubuntu4 [2330 kB] 583s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-dev arm64 1.10.10+repack-3ubuntu1 [3036 kB] 583s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 583s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 583s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 584s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 584s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 584s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 584s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 584s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 584s Get:99 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 584s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 584s Get:101 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 584s Get:102 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 584s Get:103 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 584s Get:104 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 584s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 584s Get:106 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 584s Get:107 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 584s Get:108 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 584s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 584s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 584s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 585s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 585s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 585s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 585s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 585s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 585s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 585s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 585s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 585s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 585s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 585s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 585s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 585s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 585s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 585s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 585s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB] 585s Get:128 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 585s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 585s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB] 585s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 585s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 585s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 585s Get:134 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 585s Get:135 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 585s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 585s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 585s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 585s Get:139 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 585s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 585s Get:141 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 585s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 585s Get:143 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 585s Get:144 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 585s Get:145 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 585s Get:146 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 585s Get:147 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 585s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 585s Get:149 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 585s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 585s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 585s Get:152 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 586s Get:153 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 586s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 586s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 586s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 586s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 586s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 586s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 587s Get:160 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 587s Get:161 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 587s Get:162 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 587s Get:163 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 587s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B] 587s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 587s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 587s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 587s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 587s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 587s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 587s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 587s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 587s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 587s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 587s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 587s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 587s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 588s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 588s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 588s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 588s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 588s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 588s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 588s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 588s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 588s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 588s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 588s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 588s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 588s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 588s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 588s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 588s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 588s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 588s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 588s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 588s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 588s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 588s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 588s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 588s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 588s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 589s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 589s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 590s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 590s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 590s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotate all 1.80.0+dfsg-1 [1730 kB] 590s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 590s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 590s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 590s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 590s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 590s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 590s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 590s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 590s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 590s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 590s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-beachmat arm64 2.18.1+ds-1 [1561 kB] 591s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 591s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 591s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 591s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 591s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 591s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 591s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 591s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 591s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 591s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 591s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 591s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 591s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 591s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 591s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 591s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 591s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 591s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 591s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 591s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 591s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 591s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 591s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 591s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 591s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 591s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 591s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 591s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 591s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 591s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 591s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 591s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 591s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 591s Get:252 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 591s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 591s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 591s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 591s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 591s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 591s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 591s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 591s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 591s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 591s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 591s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 591s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 591s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 591s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 591s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 591s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 592s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 592s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 592s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 592s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 592s Get:273 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 592s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 592s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 593s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 593s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 595s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 595s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 595s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 595s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 595s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml2 arm64 1.3.6-1 [321 kB] 595s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 595s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsematrixstats arm64 1.14.0+dfsg-1 [815 kB] 595s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedmatrixstats all 1.24.0+ds-1 [483 kB] 595s Get:286 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 596s Get:287 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 596s Get:288 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-locfit arm64 1.5-9.8-1 [507 kB] 596s Get:289 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 596s Get:290 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 596s Get:291 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mass arm64 7.3-60.0.1-1 [1119 kB] 596s Get:292 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nlme arm64 3.1.164-1 [2259 kB] 596s Get:293 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 596s Get:294 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-farver arm64 2.1.1-1 [1336 kB] 596s Get:295 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 596s Get:296 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-colorspace arm64 2.1-0+dfsg-1 [1540 kB] 596s Get:297 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-munsell all 0.5.0-2build1 [208 kB] 596s Get:298 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 596s Get:299 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 596s Get:300 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 596s Get:301 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 596s Get:302 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpparmadillo arm64 0.12.8.0.0-1 [859 kB] 596s Get:303 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-deseq2 arm64 1.42.0+dfsg-1 [1218 kB] 596s Get:304 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hwriter all 1.3.2.1-1 [106 kB] 596s Get:305 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhtslib arm64 2.4.1+dfsg-1 [1357 kB] 597s Get:306 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rsamtools arm64 2.18.0+dfsg-1 [3629 kB] 597s Get:307 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 597s Get:308 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-geneplotter all 1.80.0+dfsg-1 [1416 kB] 597s Get:309 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-survival arm64 3.5-8-1 [6116 kB] 597s Get:310 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genefilter arm64 1.84.0-1 [1122 kB] 597s Get:311 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-dexseq all 1.48.0+dfsg-1 [464 kB] 597s Get:312 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicalignments arm64 1.38.2-1 [2133 kB] 597s Get:313 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rjson arm64 0.2.21-1 [142 kB] 597s Get:314 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 597s Get:315 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rtracklayer arm64 1.62.0-1 [5104 kB] 598s Get:316 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 598s Get:317 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5lib arm64 1.24.2+dfsg-1 [96.1 kB] 598s Get:318 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5filters arm64 1.14.1+dfsg-3 [135 kB] 598s Get:319 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5 arm64 2.46.1+dfsg-1 [805 kB] 598s Get:320 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-hdf5array arm64 1.30.1-1 [8757 kB] 598s Get:321 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-singlecellexperiment all 1.24.0+ds-1 [828 kB] 598s Get:322 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-glmgampoi arm64 1.14.3+dfsg-1 [1192 kB] 598s Get:323 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brew all 1.0-10-1 [77.7 kB] 598s Get:324 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 598s Get:325 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 598s Get:326 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 598s Get:327 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 598s Get:328 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 598s Get:329 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 598s Get:330 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 598s Get:331 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 598s Get:332 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 598s Get:333 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 598s Get:334 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 598s Get:335 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-roxygen2 arm64 7.3.1-1 [710 kB] 598s Get:336 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 598s Get:337 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 600s Preconfiguring packages ... 600s Fetched 473 MB in 20s (24.2 MB/s) 600s Selecting previously unselected package libc-dev-bin. 601s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74314 files and directories currently installed.) 601s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 601s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 601s Selecting previously unselected package linux-libc-dev:arm64. 601s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_arm64.deb ... 601s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 601s Selecting previously unselected package libcrypt-dev:arm64. 601s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 601s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 601s Selecting previously unselected package libtirpc-dev:arm64. 601s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 601s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 601s Selecting previously unselected package libnsl-dev:arm64. 601s Preparing to unpack .../004-libnsl-dev_1.3.0-3_arm64.deb ... 601s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 601s Selecting previously unselected package rpcsvc-proto. 601s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 601s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 601s Selecting previously unselected package libc6-dev:arm64. 601s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_arm64.deb ... 601s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 601s Selecting previously unselected package libisl23:arm64. 601s Preparing to unpack .../007-libisl23_0.26-3_arm64.deb ... 601s Unpacking libisl23:arm64 (0.26-3) ... 601s Selecting previously unselected package libmpc3:arm64. 601s Preparing to unpack .../008-libmpc3_1.3.1-1_arm64.deb ... 601s Unpacking libmpc3:arm64 (1.3.1-1) ... 601s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 601s Preparing to unpack .../009-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 601s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 601s Selecting previously unselected package cpp-13. 601s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 601s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 601s Selecting previously unselected package cpp-aarch64-linux-gnu. 601s Preparing to unpack .../011-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 601s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 601s Selecting previously unselected package cpp. 601s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 601s Unpacking cpp (4:13.2.0-7ubuntu1) ... 602s Selecting previously unselected package libcc1-0:arm64. 602s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 602s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 602s Selecting previously unselected package libgomp1:arm64. 602s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 602s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 602s Selecting previously unselected package libitm1:arm64. 602s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_arm64.deb ... 602s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 602s Selecting previously unselected package libatomic1:arm64. 602s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 602s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 602s Selecting previously unselected package libasan8:arm64. 602s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_arm64.deb ... 602s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 602s Selecting previously unselected package liblsan0:arm64. 602s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 602s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 602s Selecting previously unselected package libtsan2:arm64. 602s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 602s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 602s Selecting previously unselected package libubsan1:arm64. 602s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 602s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 602s Selecting previously unselected package libhwasan0:arm64. 602s Preparing to unpack .../021-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 602s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 603s Selecting previously unselected package libgcc-13-dev:arm64. 603s Preparing to unpack .../022-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 603s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 603s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 603s Preparing to unpack .../023-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 603s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 603s Selecting previously unselected package gcc-13. 603s Preparing to unpack .../024-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 603s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 603s Selecting previously unselected package gcc-aarch64-linux-gnu. 603s Preparing to unpack .../025-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 603s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 603s Selecting previously unselected package gcc. 603s Preparing to unpack .../026-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 603s Unpacking gcc (4:13.2.0-7ubuntu1) ... 603s Selecting previously unselected package libstdc++-13-dev:arm64. 603s Preparing to unpack .../027-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 603s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 603s Selecting previously unselected package g++-13-aarch64-linux-gnu. 604s Preparing to unpack .../028-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 604s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 604s Selecting previously unselected package g++-13. 604s Preparing to unpack .../029-g++-13_13.2.0-17ubuntu2_arm64.deb ... 604s Unpacking g++-13 (13.2.0-17ubuntu2) ... 604s Selecting previously unselected package g++-aarch64-linux-gnu. 604s Preparing to unpack .../030-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 604s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 604s Selecting previously unselected package g++. 604s Preparing to unpack .../031-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 604s Unpacking g++ (4:13.2.0-7ubuntu1) ... 604s Selecting previously unselected package build-essential. 604s Preparing to unpack .../032-build-essential_12.10ubuntu1_arm64.deb ... 604s Unpacking build-essential (12.10ubuntu1) ... 604s Selecting previously unselected package dctrl-tools. 604s Preparing to unpack .../033-dctrl-tools_2.24-3build2_arm64.deb ... 604s Unpacking dctrl-tools (2.24-3build2) ... 604s Selecting previously unselected package fonts-dejavu-mono. 604s Preparing to unpack .../034-fonts-dejavu-mono_2.37-8_all.deb ... 604s Unpacking fonts-dejavu-mono (2.37-8) ... 604s Selecting previously unselected package fonts-dejavu-core. 604s Preparing to unpack .../035-fonts-dejavu-core_2.37-8_all.deb ... 604s Unpacking fonts-dejavu-core (2.37-8) ... 604s Selecting previously unselected package fontconfig-config. 604s Preparing to unpack .../036-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 604s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 605s Selecting previously unselected package libfontconfig1:arm64. 605s Preparing to unpack .../037-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 605s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 605s Selecting previously unselected package fontconfig. 605s Preparing to unpack .../038-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 605s Unpacking fontconfig (2.15.0-1ubuntu1) ... 605s Selecting previously unselected package fonts-font-awesome. 605s Preparing to unpack .../039-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 605s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 605s Selecting previously unselected package fonts-glyphicons-halflings. 605s Preparing to unpack .../040-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 605s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 605s Selecting previously unselected package fonts-lmodern. 605s Preparing to unpack .../041-fonts-lmodern_2.005-1_all.deb ... 605s Unpacking fonts-lmodern (2.005-1) ... 605s Selecting previously unselected package fonts-mathjax. 605s Preparing to unpack .../042-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 605s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 605s Selecting previously unselected package libgfortran5:arm64. 606s Preparing to unpack .../043-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 606s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 606s Selecting previously unselected package libgfortran-13-dev:arm64. 606s Preparing to unpack .../044-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 606s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 606s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 606s Preparing to unpack .../045-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 606s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 606s Selecting previously unselected package gfortran-13. 606s Preparing to unpack .../046-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 606s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 606s Selecting previously unselected package gfortran-aarch64-linux-gnu. 606s Preparing to unpack .../047-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 606s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 606s Selecting previously unselected package gfortran. 606s Preparing to unpack .../048-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 606s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 606s Selecting previously unselected package hdf5-helpers. 606s Preparing to unpack .../049-hdf5-helpers_1.10.10+repack-3ubuntu1_arm64.deb ... 606s Unpacking hdf5-helpers (1.10.10+repack-3ubuntu1) ... 606s Selecting previously unselected package icu-devtools. 606s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_arm64.deb ... 606s Unpacking icu-devtools (74.2-1ubuntu1) ... 606s Selecting previously unselected package javascript-common. 606s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 606s Unpacking javascript-common (11+nmu1) ... 606s Selecting previously unselected package libaec0:arm64. 606s Preparing to unpack .../052-libaec0_1.1.2-1_arm64.deb ... 606s Unpacking libaec0:arm64 (1.1.2-1) ... 606s Selecting previously unselected package libio-string-perl. 606s Preparing to unpack .../053-libio-string-perl_1.08-4_all.deb ... 606s Unpacking libio-string-perl (1.08-4) ... 606s Selecting previously unselected package liblatex-tounicode-perl. 606s Preparing to unpack .../054-liblatex-tounicode-perl_0.54-2_all.deb ... 606s Unpacking liblatex-tounicode-perl (0.54-2) ... 606s Selecting previously unselected package libbibtex-parser-perl. 606s Preparing to unpack .../055-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 606s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 606s Selecting previously unselected package libblas3:arm64. 606s Preparing to unpack .../056-libblas3_3.12.0-3_arm64.deb ... 606s Unpacking libblas3:arm64 (3.12.0-3) ... 606s Selecting previously unselected package libblas-dev:arm64. 606s Preparing to unpack .../057-libblas-dev_3.12.0-3_arm64.deb ... 606s Unpacking libblas-dev:arm64 (3.12.0-3) ... 606s Selecting previously unselected package libsnappy1v5:arm64. 607s Preparing to unpack .../058-libsnappy1v5_1.1.10-1_arm64.deb ... 607s Unpacking libsnappy1v5:arm64 (1.1.10-1) ... 607s Selecting previously unselected package libblosc1:arm64. 607s Preparing to unpack .../059-libblosc1_1.21.5+ds-1_arm64.deb ... 607s Unpacking libblosc1:arm64 (1.21.5+ds-1) ... 607s Selecting previously unselected package libboost1.83-dev:arm64. 607s Preparing to unpack .../060-libboost1.83-dev_1.83.0-2ubuntu1_arm64.deb ... 607s Unpacking libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 608s Selecting previously unselected package libboost-dev:arm64. 608s Preparing to unpack .../061-libboost-dev_1.83.0.1ubuntu2_arm64.deb ... 608s Unpacking libboost-dev:arm64 (1.83.0.1ubuntu2) ... 608s Selecting previously unselected package libbz2-dev:arm64. 608s Preparing to unpack .../062-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 608s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 608s Selecting previously unselected package libpixman-1-0:arm64. 608s Preparing to unpack .../063-libpixman-1-0_0.42.2-1_arm64.deb ... 608s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 608s Selecting previously unselected package libxcb-render0:arm64. 608s Preparing to unpack .../064-libxcb-render0_1.15-1_arm64.deb ... 608s Unpacking libxcb-render0:arm64 (1.15-1) ... 608s Selecting previously unselected package libxcb-shm0:arm64. 609s Preparing to unpack .../065-libxcb-shm0_1.15-1_arm64.deb ... 609s Unpacking libxcb-shm0:arm64 (1.15-1) ... 609s Selecting previously unselected package libxrender1:arm64. 609s Preparing to unpack .../066-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 609s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 609s Selecting previously unselected package libcairo2:arm64. 609s Preparing to unpack .../067-libcairo2_1.18.0-1_arm64.deb ... 609s Unpacking libcairo2:arm64 (1.18.0-1) ... 609s Selecting previously unselected package libcurl4-openssl-dev:arm64. 609s Preparing to unpack .../068-libcurl4-openssl-dev_8.5.0-2ubuntu2_arm64.deb ... 609s Unpacking libcurl4-openssl-dev:arm64 (8.5.0-2ubuntu2) ... 609s Selecting previously unselected package libdatrie1:arm64. 609s Preparing to unpack .../069-libdatrie1_0.2.13-3_arm64.deb ... 609s Unpacking libdatrie1:arm64 (0.2.13-3) ... 609s Selecting previously unselected package libdeflate0:arm64. 609s Preparing to unpack .../070-libdeflate0_1.19-1_arm64.deb ... 609s Unpacking libdeflate0:arm64 (1.19-1) ... 609s Selecting previously unselected package libgraphite2-3:arm64. 609s Preparing to unpack .../071-libgraphite2-3_1.3.14-2_arm64.deb ... 609s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 609s Selecting previously unselected package libharfbuzz0b:arm64. 609s Preparing to unpack .../072-libharfbuzz0b_8.3.0-2_arm64.deb ... 609s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 609s Selecting previously unselected package libsz2:arm64. 609s Preparing to unpack .../073-libsz2_1.1.2-1_arm64.deb ... 609s Unpacking libsz2:arm64 (1.1.2-1) ... 609s Selecting previously unselected package libhdf5-103-1:arm64. 609s Preparing to unpack .../074-libhdf5-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 609s Unpacking libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 609s Selecting previously unselected package libhdf5-cpp-103-1:arm64. 609s Preparing to unpack .../075-libhdf5-cpp-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 609s Unpacking libhdf5-cpp-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 609s Selecting previously unselected package libhdf5-fortran-102:arm64. 609s Preparing to unpack .../076-libhdf5-fortran-102_1.10.10+repack-3ubuntu1_arm64.deb ... 609s Unpacking libhdf5-fortran-102:arm64 (1.10.10+repack-3ubuntu1) ... 609s Selecting previously unselected package libhdf5-hl-100:arm64. 609s Preparing to unpack .../077-libhdf5-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ... 609s Unpacking libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 609s Selecting previously unselected package libhdf5-hl-fortran-100:arm64. 609s Preparing to unpack .../078-libhdf5-hl-fortran-100_1.10.10+repack-3ubuntu1_arm64.deb ... 609s Unpacking libhdf5-hl-fortran-100:arm64 (1.10.10+repack-3ubuntu1) ... 609s Selecting previously unselected package libhdf5-hl-cpp-100:arm64. 609s Preparing to unpack .../079-libhdf5-hl-cpp-100_1.10.10+repack-3ubuntu1_arm64.deb ... 609s Unpacking libhdf5-hl-cpp-100:arm64 (1.10.10+repack-3ubuntu1) ... 609s Selecting previously unselected package zlib1g-dev:arm64. 609s Preparing to unpack .../080-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 609s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 609s Selecting previously unselected package libjpeg-turbo8:arm64. 609s Preparing to unpack .../081-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 609s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 609s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 610s Preparing to unpack .../082-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 610s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 610s Selecting previously unselected package libjpeg8:arm64. 610s Preparing to unpack .../083-libjpeg8_8c-2ubuntu11_arm64.deb ... 610s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 610s Selecting previously unselected package libjpeg8-dev:arm64. 610s 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... 610s Unpacking x11-common (1:7.7+23ubuntu2) ... 610s Selecting previously unselected package libice6:arm64. 610s Preparing to unpack .../090-libice6_2%3a1.0.10-1build2_arm64.deb ... 610s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 610s Selecting previously unselected package libicu-dev:arm64. 610s Preparing to unpack .../091-libicu-dev_74.2-1ubuntu1_arm64.deb ... 610s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 611s Selecting previously unselected package libjs-bootstrap. 611s Preparing to unpack .../092-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 611s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 611s Selecting previously unselected package libjs-popper.js. 611s Preparing to unpack .../093-libjs-popper.js_1.16.1+ds-6_all.deb ... 611s Unpacking libjs-popper.js (1.16.1+ds-6) ... 611s Selecting previously unselected package libjs-bootstrap4. 611s Preparing to unpack .../094-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 611s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 611s Selecting previously unselected package libjs-d3. 611s Preparing to unpack .../095-libjs-d3_3.5.17-4_all.deb ... 611s Unpacking libjs-d3 (3.5.17-4) ... 611s Selecting previously unselected package libjs-es5-shim. 611s Preparing to unpack .../096-libjs-es5-shim_4.6.7-2_all.deb ... 611s Unpacking libjs-es5-shim (4.6.7-2) ... 611s Selecting previously unselected package libjs-highlight.js. 611s Preparing to unpack .../097-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 611s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 611s Selecting previously unselected package libjs-jquery. 611s Preparing to unpack .../098-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 611s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 611s Selecting previously unselected package libjs-jquery-datatables. 611s Preparing to unpack .../099-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 611s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 611s Selecting previously unselected package libjs-sifter.js. 611s Preparing to unpack .../100-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 611s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 611s Selecting previously unselected package libjs-microplugin.js. 612s Preparing to unpack .../101-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 612s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 612s Selecting previously unselected package libjs-jquery-selectize.js. 612s Preparing to unpack .../102-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 612s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 612s Selecting previously unselected package libjs-jquery-ui. 612s Preparing to unpack .../103-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 612s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 612s Selecting previously unselected package libjs-json. 612s Preparing to unpack .../104-libjs-json_0~20221030+~1.0.8-1_all.deb ... 612s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 612s Selecting previously unselected package libjs-lunr. 612s Preparing to unpack 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Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 612s Selecting previously unselected package liblua5.4-0:arm64. 612s Preparing to unpack .../111-liblua5.4-0_5.4.6-3_arm64.deb ... 612s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 612s Selecting previously unselected package libncurses-dev:arm64. 612s Preparing to unpack .../112-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 612s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 612s Selecting previously unselected package libthai-data. 612s Preparing to unpack .../113-libthai-data_0.1.29-2_all.deb ... 612s Unpacking libthai-data (0.1.29-2) ... 612s Selecting previously unselected package libthai0:arm64. 612s Preparing to unpack .../114-libthai0_0.1.29-2_arm64.deb ... 612s Unpacking libthai0:arm64 (0.1.29-2) ... 612s Selecting previously unselected package libpango-1.0-0:arm64. 612s Preparing to unpack .../115-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 612s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 612s Selecting previously unselected package libpangoft2-1.0-0:arm64. 612s Preparing to unpack .../116-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 612s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 612s Selecting previously unselected package libpangocairo-1.0-0:arm64. 612s Preparing to unpack .../117-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 612s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 612s Selecting previously unselected package libpaper1:arm64. 613s Preparing to unpack .../118-libpaper1_1.1.29_arm64.deb ... 613s Unpacking libpaper1:arm64 (1.1.29) ... 613s Selecting previously unselected package libpaper-utils. 613s Preparing to unpack .../119-libpaper-utils_1.1.29_arm64.deb ... 613s Unpacking libpaper-utils (1.1.29) ... 613s Selecting previously unselected package libpcre2-16-0:arm64. 613s Preparing to unpack .../120-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 613s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 613s Selecting previously unselected package libpcre2-32-0:arm64. 613s Preparing to unpack .../121-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 613s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 613s Selecting previously unselected package libpcre2-posix3:arm64. 613s Preparing to unpack .../122-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 613s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 613s Selecting previously unselected package libpcre2-dev:arm64. 613s Preparing to unpack .../123-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 613s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 613s Selecting previously unselected package libpkgconf3:arm64. 613s Preparing to unpack .../124-libpkgconf3_1.8.1-2_arm64.deb ... 613s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 613s Selecting previously unselected package libpng-dev:arm64. 613s Preparing to unpack .../125-libpng-dev_1.6.43-1_arm64.deb ... 613s Unpacking libpng-dev:arm64 (1.6.43-1) ... 613s Selecting previously unselected package libpotrace0:arm64. 613s Preparing to unpack .../126-libpotrace0_1.16-2_arm64.deb ... 613s Unpacking libpotrace0:arm64 (1.16-2) ... 613s Selecting previously unselected package libptexenc1:arm64. 613s Preparing to unpack .../127-libptexenc1_2023.20230311.66589-9_arm64.deb ... 613s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 613s Selecting previously unselected package libreadline-dev:arm64. 613s Preparing to unpack .../128-libreadline-dev_8.2-3_arm64.deb ... 613s Unpacking libreadline-dev:arm64 (8.2-3) ... 613s Selecting previously unselected package libsharpyuv0:arm64. 613s Preparing to unpack .../129-libsharpyuv0_1.3.2-0.4_arm64.deb ... 613s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 613s Selecting previously unselected package libsm6:arm64. 613s Preparing to unpack .../130-libsm6_2%3a1.2.3-1build2_arm64.deb ... 613s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 613s Selecting previously unselected package libsynctex2:arm64. 613s Preparing to unpack .../131-libsynctex2_2023.20230311.66589-9_arm64.deb ... 613s Unpacking libsynctex2:arm64 (2023.20230311.66589-9) ... 613s Selecting previously unselected package libtcl8.6:arm64. 613s Preparing to unpack .../132-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 613s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 613s Selecting previously unselected package libteckit0:arm64. 613s Preparing to unpack .../133-libteckit0_2.5.12+ds1-1_arm64.deb ... 613s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 614s Selecting previously unselected package libtexlua53-5:arm64. 614s Preparing to unpack .../134-libtexlua53-5_2023.20230311.66589-9_arm64.deb ... 614s Unpacking libtexlua53-5:arm64 (2023.20230311.66589-9) ... 614s Selecting previously unselected package libjbig0:arm64. 614s Preparing to unpack .../135-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 614s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 614s Selecting previously unselected package libwebp7:arm64. 614s Preparing to unpack .../136-libwebp7_1.3.2-0.4_arm64.deb ... 614s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 614s Selecting previously unselected package libtiff6:arm64. 614s Preparing to unpack .../137-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 614s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 614s Selecting previously unselected package libxft2:arm64. 614s Preparing to unpack .../138-libxft2_2.3.6-1_arm64.deb ... 614s Unpacking libxft2:arm64 (2.3.6-1) ... 614s Selecting previously unselected package libxss1:arm64. 614s Preparing to unpack .../139-libxss1_1%3a1.2.3-1build2_arm64.deb ... 614s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 614s Selecting previously unselected package libtk8.6:arm64. 614s Preparing to unpack .../140-libtk8.6_8.6.13-2_arm64.deb ... 614s Unpacking libtk8.6:arm64 (8.6.13-2) ... 614s Selecting previously unselected package libxt6:arm64. 614s Preparing to unpack .../141-libxt6_1%3a1.2.1-1.1_arm64.deb ... 614s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 614s Selecting previously unselected package libxmu6:arm64. 614s Preparing to unpack .../142-libxmu6_2%3a1.1.3-3_arm64.deb ... 614s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 614s Selecting previously unselected package libxpm4:arm64. 614s Preparing to unpack .../143-libxpm4_1%3a3.5.17-1_arm64.deb ... 614s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 614s Selecting previously unselected package libxaw7:arm64. 614s Preparing to unpack .../144-libxaw7_2%3a1.0.14-1_arm64.deb ... 614s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 614s Selecting previously unselected package libxi6:arm64. 614s Preparing to unpack .../145-libxi6_2%3a1.8.1-1_arm64.deb ... 614s Unpacking libxi6:arm64 (2:1.8.1-1) ... 614s Selecting previously unselected package libzzip-0-13:arm64. 614s Preparing to unpack .../146-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 614s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 614s Selecting previously unselected package zip. 614s Preparing to unpack .../147-zip_3.0-13_arm64.deb ... 614s Unpacking zip (3.0-13) ... 614s Selecting previously unselected package unzip. 614s Preparing to unpack .../148-unzip_6.0-28ubuntu3_arm64.deb ... 614s Unpacking unzip (6.0-28ubuntu3) ... 614s Selecting previously unselected package xdg-utils. 615s Preparing to unpack .../149-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 615s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 615s Selecting previously unselected package r-base-core. 615s Preparing to unpack .../150-r-base-core_4.3.2-1build1_arm64.deb ... 615s Unpacking r-base-core (4.3.2-1build1) ... 615s Selecting previously unselected package r-cran-littler. 615s Preparing to unpack .../151-r-cran-littler_0.3.19-1_arm64.deb ... 615s Unpacking r-cran-littler (0.3.19-1) ... 615s Selecting previously unselected package littler. 615s Preparing to unpack .../152-littler_0.3.19-1_all.deb ... 615s Unpacking littler (0.3.19-1) ... 615s Selecting previously unselected package node-bootstrap-sass. 615s Preparing to unpack .../153-node-bootstrap-sass_3.4.3-2_all.deb ... 615s Unpacking node-bootstrap-sass (3.4.3-2) ... 615s Selecting previously unselected package node-html5shiv. 615s Preparing to unpack .../154-node-html5shiv_3.7.3+dfsg-5_all.deb ... 615s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 615s Selecting previously unselected package node-normalize.css. 615s Preparing to unpack .../155-node-normalize.css_8.0.1-5_all.deb ... 615s Unpacking node-normalize.css (8.0.1-5) ... 615s Selecting previously unselected package pandoc-data. 616s Preparing to unpack .../156-pandoc-data_3.1.3-1_all.deb ... 616s Unpacking pandoc-data (3.1.3-1) ... 616s Selecting previously unselected package pandoc. 616s Preparing to unpack .../157-pandoc_3.1.3+ds-2_arm64.deb ... 616s Unpacking pandoc (3.1.3+ds-2) ... 617s Selecting previously unselected package pkgconf-bin. 617s Preparing to unpack .../158-pkgconf-bin_1.8.1-2_arm64.deb ... 617s Unpacking pkgconf-bin (1.8.1-2) ... 617s Selecting previously unselected package pkgconf:arm64. 617s Preparing to unpack .../159-pkgconf_1.8.1-2_arm64.deb ... 617s Unpacking pkgconf:arm64 (1.8.1-2) ... 617s Selecting previously unselected package pkg-config:arm64. 617s Preparing to unpack .../160-pkg-config_1.8.1-2_arm64.deb ... 617s Unpacking pkg-config:arm64 (1.8.1-2) ... 617s Selecting previously unselected package liblzma-dev:arm64. 617s Preparing to unpack .../161-liblzma-dev_5.4.5-0.3_arm64.deb ... 617s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 617s Selecting previously unselected package r-base-dev. 618s Preparing to unpack .../162-r-base-dev_4.3.2-1build1_all.deb ... 618s Unpacking r-base-dev (4.3.2-1build1) ... 618s Selecting previously unselected package pkg-r-autopkgtest. 618s Preparing to unpack .../163-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 618s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 618s Selecting previously unselected package r-bioc-biocgenerics. 618s Preparing to unpack .../164-r-bioc-biocgenerics_0.48.1-2_all.deb ... 618s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 618s Selecting previously unselected package r-bioc-biobase. 618s Preparing to unpack .../165-r-bioc-biobase_2.62.0-1_arm64.deb ... 618s Unpacking r-bioc-biobase (2.62.0-1) ... 618s Selecting previously unselected package r-bioc-s4vectors. 619s Preparing to unpack .../166-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 619s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 619s Selecting previously unselected package r-bioc-iranges. 619s Preparing to unpack .../167-r-bioc-iranges_2.36.0-1_arm64.deb ... 619s Unpacking r-bioc-iranges (2.36.0-1) ... 619s Selecting previously unselected package r-cran-dbi. 619s Preparing to unpack .../168-r-cran-dbi_1.2.2-1_all.deb ... 619s Unpacking r-cran-dbi (1.2.2-1) ... 619s Selecting previously unselected package r-cran-bit. 619s Preparing to unpack .../169-r-cran-bit_4.0.5-1_arm64.deb ... 619s Unpacking r-cran-bit (4.0.5-1) ... 619s Selecting previously unselected package r-cran-bit64. 619s Preparing to unpack .../170-r-cran-bit64_4.0.5-1_arm64.deb ... 619s Unpacking r-cran-bit64 (4.0.5-1) ... 619s Selecting previously unselected package r-cran-rlang. 619s Preparing to unpack .../171-r-cran-rlang_1.1.3-1_arm64.deb ... 619s Unpacking r-cran-rlang (1.1.3-1) ... 619s Selecting previously unselected package r-cran-cli. 619s Preparing to unpack .../172-r-cran-cli_3.6.2-1_arm64.deb ... 619s Unpacking r-cran-cli (3.6.2-1) ... 619s Selecting previously unselected package r-cran-glue. 619s Preparing to unpack .../173-r-cran-glue_1.7.0-1_arm64.deb ... 619s Unpacking r-cran-glue (1.7.0-1) ... 619s Selecting previously unselected package r-cran-lifecycle. 619s Preparing to unpack .../174-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 619s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 619s Selecting previously unselected package r-cran-vctrs. 619s Preparing to unpack .../175-r-cran-vctrs_0.6.5-1_arm64.deb ... 619s Unpacking r-cran-vctrs (0.6.5-1) ... 619s Selecting previously unselected package r-cran-blob. 619s Preparing to unpack .../176-r-cran-blob_1.2.4-1_all.deb ... 619s Unpacking r-cran-blob (1.2.4-1) ... 619s Selecting previously unselected package r-cran-fastmap. 619s Preparing to unpack .../177-r-cran-fastmap_1.1.1-1_arm64.deb ... 619s Unpacking r-cran-fastmap (1.1.1-1) ... 620s Selecting previously unselected package r-cran-cachem. 620s Preparing to unpack .../178-r-cran-cachem_1.0.8-1_arm64.deb ... 620s Unpacking r-cran-cachem (1.0.8-1) ... 620s Selecting previously unselected package r-cran-memoise. 620s Preparing to unpack .../179-r-cran-memoise_2.0.1-1_all.deb ... 620s Unpacking r-cran-memoise (2.0.1-1) ... 620s Selecting previously unselected package r-cran-pkgconfig. 620s Preparing to unpack .../180-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 620s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 620s Selecting previously unselected package r-cran-plogr. 620s Preparing to unpack .../181-r-cran-plogr_0.2.0-3build1_all.deb ... 620s Unpacking r-cran-plogr (0.2.0-3build1) ... 620s Selecting previously unselected package r-cran-cpp11. 620s Preparing to unpack .../182-r-cran-cpp11_0.4.7-1_all.deb ... 620s Unpacking r-cran-cpp11 (0.4.7-1) ... 620s Selecting previously unselected package r-cran-rsqlite. 620s Preparing to unpack .../183-r-cran-rsqlite_2.3.4-1_arm64.deb ... 620s Unpacking r-cran-rsqlite (2.3.4-1) ... 620s Selecting previously unselected package r-cran-curl. 620s Preparing to unpack .../184-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 620s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 620s Selecting previously unselected package r-cran-jsonlite. 620s Preparing to unpack .../185-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 620s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 620s Selecting previously unselected package r-cran-mime. 620s Preparing to unpack .../186-r-cran-mime_0.12-1_arm64.deb ... 620s Unpacking r-cran-mime (0.12-1) ... 620s Selecting previously unselected package r-cran-sys. 620s Preparing to unpack .../187-r-cran-sys_3.4.2-1_arm64.deb ... 620s Unpacking r-cran-sys (3.4.2-1) ... 620s Selecting previously unselected package r-cran-askpass. 620s Preparing to unpack .../188-r-cran-askpass_1.2.0-1_arm64.deb ... 620s Unpacking r-cran-askpass (1.2.0-1) ... 620s Selecting previously unselected package r-cran-openssl. 620s Preparing to unpack .../189-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 620s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 620s Selecting previously unselected package r-cran-r6. 620s Preparing to unpack .../190-r-cran-r6_2.5.1-1_all.deb ... 620s Unpacking r-cran-r6 (2.5.1-1) ... 620s Selecting previously unselected package r-cran-httr. 620s Preparing to unpack .../191-r-cran-httr_1.4.7+dfsg-1_all.deb ... 620s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 620s Selecting previously unselected package r-cran-png. 620s Preparing to unpack .../192-r-cran-png_0.1-8-1_arm64.deb ... 620s Unpacking r-cran-png (0.1-8-1) ... 620s Selecting previously unselected package r-bioc-zlibbioc. 620s Preparing to unpack .../193-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 620s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 620s Selecting previously unselected package r-bioc-xvector. 621s Preparing to unpack .../194-r-bioc-xvector_0.42.0-1_arm64.deb ... 621s Unpacking r-bioc-xvector (0.42.0-1) ... 621s Selecting previously unselected package r-cran-bitops. 621s Preparing to unpack .../195-r-cran-bitops_1.0-7-1_arm64.deb ... 621s Unpacking r-cran-bitops (1.0-7-1) ... 621s Selecting previously unselected package r-cran-rcurl. 621s Preparing to unpack .../196-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 621s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 621s Selecting previously unselected package r-bioc-genomeinfodbdata. 621s Preparing to unpack .../197-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 621s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 621s Selecting previously unselected package r-bioc-genomeinfodb. 621s Preparing to unpack .../198-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 621s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 621s Selecting previously unselected package r-cran-crayon. 621s Preparing to unpack .../199-r-cran-crayon_1.5.2-1_all.deb ... 621s Unpacking r-cran-crayon (1.5.2-1) ... 621s Selecting previously unselected package r-bioc-biostrings. 621s Preparing to unpack .../200-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 621s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 621s Selecting previously unselected package r-bioc-keggrest. 621s Preparing to unpack .../201-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 621s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 621s Selecting previously unselected package r-bioc-annotationdbi. 621s Preparing to unpack .../202-r-bioc-annotationdbi_1.64.1-1_all.deb ... 621s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 621s Selecting previously unselected package r-cran-xml. 621s Preparing to unpack .../203-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 621s Unpacking r-cran-xml (3.99-0.16.1-1) ... 621s Selecting previously unselected package r-cran-xtable. 621s Preparing to unpack .../204-r-cran-xtable_1%3a1.8-4-2_all.deb ... 621s Unpacking r-cran-xtable (1:1.8-4-2) ... 621s Selecting previously unselected package r-bioc-annotate. 621s Preparing to unpack .../205-r-bioc-annotate_1.80.0+dfsg-1_all.deb ... 621s Unpacking r-bioc-annotate (1.80.0+dfsg-1) ... 621s Selecting previously unselected package r-cran-lattice. 621s Preparing to unpack .../206-r-cran-lattice_0.22-5-1_arm64.deb ... 621s Unpacking r-cran-lattice (0.22-5-1) ... 621s Selecting previously unselected package r-cran-matrix. 622s Preparing to unpack .../207-r-cran-matrix_1.6-5-1_arm64.deb ... 622s Unpacking r-cran-matrix (1.6-5-1) ... 622s Selecting previously unselected package r-cran-matrixstats. 622s Preparing to unpack .../208-r-cran-matrixstats_1.2.0-1_arm64.deb ... 622s Unpacking r-cran-matrixstats (1.2.0-1) ... 622s Selecting previously unselected package r-bioc-matrixgenerics. 622s Preparing to unpack .../209-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 622s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 622s Selecting previously unselected package r-cran-abind. 622s Preparing to unpack .../210-r-cran-abind_1.4-5-2_all.deb ... 622s Unpacking r-cran-abind (1.4-5-2) ... 622s Selecting previously unselected package r-bioc-s4arrays. 622s Preparing to unpack .../211-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 622s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 622s Selecting previously unselected package r-bioc-sparsearray. 622s Preparing to unpack .../212-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 622s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 622s Selecting previously unselected package r-bioc-delayedarray. 622s Preparing to unpack .../213-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 622s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 622s Selecting previously unselected package r-cran-pkgkitten. 622s Preparing to unpack .../214-r-cran-pkgkitten_0.2.3-1_all.deb ... 622s Unpacking r-cran-pkgkitten (0.2.3-1) ... 622s Selecting previously unselected package r-cran-rcpp. 622s Preparing to unpack .../215-r-cran-rcpp_1.0.12-1_arm64.deb ... 622s Unpacking r-cran-rcpp (1.0.12-1) ... 622s Selecting previously unselected package r-bioc-beachmat. 622s Preparing to unpack .../216-r-bioc-beachmat_2.18.1+ds-1_arm64.deb ... 622s Unpacking r-bioc-beachmat (2.18.1+ds-1) ... 622s Selecting previously unselected package r-cran-generics. 623s Preparing to unpack .../217-r-cran-generics_0.1.3-1_all.deb ... 623s Unpacking r-cran-generics (0.1.3-1) ... 623s Selecting previously unselected package r-cran-magrittr. 623s Preparing to unpack .../218-r-cran-magrittr_2.0.3-1_arm64.deb ... 623s Unpacking r-cran-magrittr (2.0.3-1) ... 623s Selecting previously unselected package r-cran-fansi. 623s Preparing to unpack .../219-r-cran-fansi_1.0.5-1_arm64.deb ... 623s Unpacking r-cran-fansi (1.0.5-1) ... 623s Selecting previously unselected package r-cran-utf8. 623s Preparing to unpack .../220-r-cran-utf8_1.2.4-1_arm64.deb ... 623s Unpacking r-cran-utf8 (1.2.4-1) ... 623s Selecting previously unselected package r-cran-pillar. 623s Preparing to unpack .../221-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 623s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 623s Selecting previously unselected package r-cran-tibble. 623s Preparing to unpack .../222-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 623s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 623s Selecting previously unselected package r-cran-withr. 623s Preparing to unpack .../223-r-cran-withr_2.5.0-1_all.deb ... 623s Unpacking r-cran-withr (2.5.0-1) ... 623s Selecting previously unselected package r-cran-tidyselect. 623s Preparing to unpack .../224-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 623s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 623s Selecting previously unselected package r-cran-dplyr. 623s Preparing to unpack .../225-r-cran-dplyr_1.1.4-1_arm64.deb ... 623s Unpacking r-cran-dplyr (1.1.4-1) ... 623s Selecting previously unselected package r-cran-purrr. 623s Preparing to unpack .../226-r-cran-purrr_1.0.2-1_arm64.deb ... 623s Unpacking r-cran-purrr (1.0.2-1) ... 623s Selecting previously unselected package r-cran-stringi. 623s Preparing to unpack .../227-r-cran-stringi_1.8.3-1_arm64.deb ... 623s Unpacking r-cran-stringi (1.8.3-1) ... 623s Selecting previously unselected package r-cran-stringr. 623s Preparing to unpack .../228-r-cran-stringr_1.5.1-1_all.deb ... 623s Unpacking r-cran-stringr (1.5.1-1) ... 624s Selecting previously unselected package r-cran-tidyr. 624s Preparing to unpack .../229-r-cran-tidyr_1.3.1-1_arm64.deb ... 624s Unpacking r-cran-tidyr (1.3.1-1) ... 624s Selecting previously unselected package r-cran-dbplyr. 624s Preparing to unpack .../230-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 624s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 624s Selecting previously unselected package r-cran-filelock. 624s Preparing to unpack .../231-r-cran-filelock_1.0.3-1_arm64.deb ... 624s Unpacking r-cran-filelock (1.0.3-1) ... 624s Selecting previously unselected package r-bioc-biocfilecache. 624s Preparing to unpack .../232-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 624s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 624s Selecting previously unselected package r-bioc-biocio. 624s Preparing to unpack .../233-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 624s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 624s Selecting previously unselected package r-cran-formatr. 624s Preparing to unpack .../234-r-cran-formatr_1.14-1_all.deb ... 624s Unpacking r-cran-formatr (1.14-1) ... 624s Selecting previously unselected package r-cran-lambda.r. 624s Preparing to unpack .../235-r-cran-lambda.r_1.2.4-2build1_all.deb ... 624s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 624s Selecting previously unselected package r-cran-futile.options. 624s Preparing to unpack .../236-r-cran-futile.options_1.0.1-3build1_all.deb ... 624s Unpacking r-cran-futile.options (1.0.1-3build1) ... 624s Selecting previously unselected package r-cran-futile.logger. 624s Preparing to unpack .../237-r-cran-futile.logger_1.4.3-4build1_all.deb ... 624s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 624s Selecting previously unselected package r-cran-snow. 624s Preparing to unpack .../238-r-cran-snow_1%3a0.4.4-2_all.deb ... 624s Unpacking r-cran-snow (1:0.4.4-2) ... 624s Selecting previously unselected package r-cran-codetools. 624s Preparing to unpack .../239-r-cran-codetools_0.2-19-1_all.deb ... 624s Unpacking r-cran-codetools (0.2-19-1) ... 624s Selecting previously unselected package r-cran-bh. 624s Preparing to unpack .../240-r-cran-bh_1.84.0-1_all.deb ... 624s Unpacking r-cran-bh (1.84.0-1) ... 624s Selecting previously unselected package r-bioc-biocparallel. 624s Preparing to unpack .../241-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 624s Unpacking r-bioc-biocparallel (1.36.0-1) ... 624s Selecting previously unselected package r-cran-base64enc. 624s Preparing to unpack .../242-r-cran-base64enc_0.1-3-3_arm64.deb ... 624s Unpacking r-cran-base64enc (0.1-3-3) ... 624s Selecting previously unselected package r-cran-digest. 624s Preparing to unpack .../243-r-cran-digest_0.6.34-1_arm64.deb ... 624s Unpacking r-cran-digest (0.6.34-1) ... 625s Selecting previously unselected package r-cran-ellipsis. 625s Preparing to unpack .../244-r-cran-ellipsis_0.3.2-2_arm64.deb ... 625s Unpacking r-cran-ellipsis (0.3.2-2) ... 625s Selecting previously unselected package r-cran-htmltools. 625s Preparing to unpack .../245-r-cran-htmltools_0.5.7-1_arm64.deb ... 625s Unpacking r-cran-htmltools (0.5.7-1) ... 625s Selecting previously unselected package r-cran-evaluate. 625s Preparing to unpack .../246-r-cran-evaluate_0.23-1_all.deb ... 625s Unpacking r-cran-evaluate (0.23-1) ... 625s Selecting previously unselected package r-cran-xfun. 625s Preparing to unpack .../247-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 625s Unpacking r-cran-xfun (0.41+dfsg-1) ... 625s Selecting previously unselected package r-cran-highr. 625s Preparing to unpack .../248-r-cran-highr_0.10+dfsg-1_all.deb ... 625s Unpacking r-cran-highr (0.10+dfsg-1) ... 625s Selecting previously unselected package r-cran-yaml. 625s Preparing to unpack .../249-r-cran-yaml_2.3.8-1_arm64.deb ... 625s Unpacking r-cran-yaml (2.3.8-1) ... 625s Selecting previously unselected package libjs-mathjax. 625s Preparing to unpack .../250-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 625s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 626s Selecting previously unselected package r-cran-knitr. 626s Preparing to unpack .../251-r-cran-knitr_1.45+dfsg-1_all.deb ... 626s Unpacking r-cran-knitr (1.45+dfsg-1) ... 626s Selecting previously unselected package r-cran-jquerylib. 626s Preparing to unpack .../252-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 626s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 626s Selecting previously unselected package r-cran-fs. 626s Preparing to unpack .../253-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 626s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 626s Selecting previously unselected package r-cran-rappdirs. 626s Preparing to unpack .../254-r-cran-rappdirs_0.3.3-1_arm64.deb ... 626s Unpacking r-cran-rappdirs (0.3.3-1) ... 626s Selecting previously unselected package r-cran-sass. 626s Preparing to unpack .../255-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 626s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 626s Selecting previously unselected package r-cran-bslib. 626s Preparing to unpack .../256-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 626s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 626s Selecting previously unselected package r-cran-fontawesome. 627s Preparing to unpack .../257-r-cran-fontawesome_0.5.2-1_all.deb ... 627s Unpacking r-cran-fontawesome (0.5.2-1) ... 627s Selecting previously unselected package r-cran-tinytex. 627s Preparing to unpack .../258-r-cran-tinytex_0.49-1_all.deb ... 627s Unpacking r-cran-tinytex (0.49-1) ... 627s Selecting previously unselected package libjs-modernizr. 627s Preparing to unpack .../259-libjs-modernizr_2.6.2+ds1-5_all.deb ... 627s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 627s Selecting previously unselected package r-cran-later. 627s Preparing to unpack .../260-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 627s Unpacking r-cran-later (1.3.2+dfsg-1) ... 627s Selecting previously unselected package r-cran-promises. 627s Preparing to unpack .../261-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 627s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 627s Selecting previously unselected package r-cran-httpuv. 627s Preparing to unpack .../262-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 627s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 627s Selecting previously unselected package r-cran-sourcetools. 627s Preparing to unpack .../263-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 627s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 627s Selecting previously unselected package r-cran-commonmark. 627s Preparing to unpack .../264-r-cran-commonmark_1.9.1-1_arm64.deb ... 627s Unpacking r-cran-commonmark (1.9.1-1) ... 627s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 627s Preparing to unpack .../265-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 627s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 627s Selecting previously unselected package r-cran-shiny. 627s Preparing to unpack .../266-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 627s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 627s Selecting previously unselected package r-cran-rmarkdown. 627s Preparing to unpack .../267-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 627s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 627s Selecting previously unselected package r-cran-bookdown. 627s Preparing to unpack .../268-r-cran-bookdown_0.37+dfsg-1_all.deb ... 627s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 628s Selecting previously unselected package r-cran-biocmanager. 628s Preparing to unpack .../269-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 628s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 628s Selecting previously unselected package tex-common. 628s Preparing to unpack .../270-tex-common_6.18_all.deb ... 628s Unpacking tex-common (6.18) ... 628s Selecting previously unselected package t1utils. 628s Preparing to unpack .../271-t1utils_1.41-4build2_arm64.deb ... 628s Unpacking t1utils (1.41-4build2) ... 628s Selecting previously unselected package texlive-binaries. 628s Preparing to unpack .../272-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 628s Unpacking texlive-binaries (2023.20230311.66589-9) ... 628s Selecting previously unselected package texlive-base. 628s Preparing to unpack .../273-texlive-base_2023.20240207-1_all.deb ... 628s Unpacking texlive-base (2023.20240207-1) ... 629s Selecting previously unselected package texlive-latex-base. 629s Preparing to unpack .../274-texlive-latex-base_2023.20240207-1_all.deb ... 629s Unpacking texlive-latex-base (2023.20240207-1) ... 630s Selecting previously unselected package texlive-bibtex-extra. 630s Preparing to unpack .../275-texlive-bibtex-extra_2023.20240207-1_all.deb ... 630s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 633s Selecting previously unselected package r-bioc-biocstyle. 633s Preparing to unpack .../276-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 633s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 633s Selecting previously unselected package r-cran-hms. 633s Preparing to unpack .../277-r-cran-hms_1.1.3-1_all.deb ... 633s Unpacking r-cran-hms (1.1.3-1) ... 633s Selecting previously unselected package r-cran-prettyunits. 633s Preparing to unpack .../278-r-cran-prettyunits_1.2.0-1_all.deb ... 633s Unpacking r-cran-prettyunits (1.2.0-1) ... 633s Selecting previously unselected package r-cran-progress. 633s Preparing to unpack .../279-r-cran-progress_1.2.3-1_all.deb ... 633s Unpacking r-cran-progress (1.2.3-1) ... 633s Selecting previously unselected package r-cran-xml2. 633s Preparing to unpack .../280-r-cran-xml2_1.3.6-1_arm64.deb ... 633s Unpacking r-cran-xml2 (1.3.6-1) ... 633s Selecting previously unselected package r-bioc-biomart. 634s Preparing to unpack .../281-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 634s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 634s Selecting previously unselected package r-bioc-sparsematrixstats. 634s Preparing to unpack .../282-r-bioc-sparsematrixstats_1.14.0+dfsg-1_arm64.deb ... 634s Unpacking r-bioc-sparsematrixstats (1.14.0+dfsg-1) ... 634s Selecting previously unselected package r-bioc-delayedmatrixstats. 634s Preparing to unpack .../283-r-bioc-delayedmatrixstats_1.24.0+ds-1_all.deb ... 634s Unpacking r-bioc-delayedmatrixstats (1.24.0+ds-1) ... 634s Selecting previously unselected package r-bioc-genomicranges. 634s Preparing to unpack .../284-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 634s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 634s Selecting previously unselected package r-bioc-summarizedexperiment. 635s Preparing to unpack .../285-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 635s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 635s Selecting previously unselected package r-cran-locfit. 635s Preparing to unpack .../286-r-cran-locfit_1.5-9.8-1_arm64.deb ... 635s Unpacking r-cran-locfit (1.5-9.8-1) ... 635s Selecting previously unselected package r-cran-gtable. 635s Preparing to unpack .../287-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 635s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 635s Selecting previously unselected package r-cran-isoband. 635s Preparing to unpack .../288-r-cran-isoband_0.2.7-1_arm64.deb ... 635s Unpacking r-cran-isoband (0.2.7-1) ... 635s Selecting previously unselected package r-cran-mass. 635s Preparing to unpack .../289-r-cran-mass_7.3-60.0.1-1_arm64.deb ... 635s Unpacking r-cran-mass (7.3-60.0.1-1) ... 635s Selecting previously unselected package r-cran-nlme. 635s Preparing to unpack .../290-r-cran-nlme_3.1.164-1_arm64.deb ... 635s Unpacking r-cran-nlme (3.1.164-1) ... 635s Selecting previously unselected package r-cran-mgcv. 636s Preparing to unpack .../291-r-cran-mgcv_1.9-1-1_arm64.deb ... 636s Unpacking r-cran-mgcv (1.9-1-1) ... 636s Selecting previously unselected package r-cran-farver. 636s Preparing to unpack .../292-r-cran-farver_2.1.1-1_arm64.deb ... 636s Unpacking r-cran-farver (2.1.1-1) ... 636s Selecting previously unselected package r-cran-labeling. 636s Preparing to unpack .../293-r-cran-labeling_0.4.3-1_all.deb ... 636s Unpacking r-cran-labeling (0.4.3-1) ... 636s Selecting previously unselected package r-cran-colorspace. 636s Preparing to unpack .../294-r-cran-colorspace_2.1-0+dfsg-1_arm64.deb ... 636s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 636s Selecting previously unselected package r-cran-munsell. 636s Preparing to unpack .../295-r-cran-munsell_0.5.0-2build1_all.deb ... 636s Unpacking r-cran-munsell (0.5.0-2build1) ... 636s Selecting previously unselected package r-cran-rcolorbrewer. 636s Preparing to unpack .../296-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 636s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 636s Selecting previously unselected package r-cran-viridislite. 636s Preparing to unpack .../297-r-cran-viridislite_0.4.2-2_all.deb ... 636s Unpacking r-cran-viridislite (0.4.2-2) ... 636s Selecting previously unselected package r-cran-scales. 636s Preparing to unpack .../298-r-cran-scales_1.3.0-1_all.deb ... 636s Unpacking r-cran-scales (1.3.0-1) ... 636s Selecting previously unselected package r-cran-ggplot2. 636s Preparing to unpack .../299-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 636s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 636s Selecting previously unselected package r-cran-rcpparmadillo. 636s Preparing to unpack .../300-r-cran-rcpparmadillo_0.12.8.0.0-1_arm64.deb ... 636s Unpacking r-cran-rcpparmadillo (0.12.8.0.0-1) ... 636s Selecting previously unselected package r-bioc-deseq2. 637s Preparing to unpack .../301-r-bioc-deseq2_1.42.0+dfsg-1_arm64.deb ... 637s Unpacking r-bioc-deseq2 (1.42.0+dfsg-1) ... 637s Selecting previously unselected package r-cran-hwriter. 637s Preparing to unpack .../302-r-cran-hwriter_1.3.2.1-1_all.deb ... 637s Unpacking r-cran-hwriter (1.3.2.1-1) ... 637s Selecting previously unselected package r-bioc-rhtslib. 637s Preparing to unpack .../303-r-bioc-rhtslib_2.4.1+dfsg-1_arm64.deb ... 637s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 637s Selecting previously unselected package r-bioc-rsamtools. 637s Preparing to unpack .../304-r-bioc-rsamtools_2.18.0+dfsg-1_arm64.deb ... 637s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 637s Selecting previously unselected package r-cran-statmod. 637s Preparing to unpack .../305-r-cran-statmod_1.5.0-1_arm64.deb ... 637s Unpacking r-cran-statmod (1.5.0-1) ... 637s Selecting previously unselected package r-bioc-geneplotter. 637s Preparing to unpack .../306-r-bioc-geneplotter_1.80.0+dfsg-1_all.deb ... 637s Unpacking r-bioc-geneplotter (1.80.0+dfsg-1) ... 637s Selecting previously unselected package r-cran-survival. 638s Preparing to unpack .../307-r-cran-survival_3.5-8-1_arm64.deb ... 638s Unpacking r-cran-survival (3.5-8-1) ... 638s Selecting previously unselected package r-bioc-genefilter. 638s Preparing to unpack .../308-r-bioc-genefilter_1.84.0-1_arm64.deb ... 638s Unpacking r-bioc-genefilter (1.84.0-1) ... 638s Selecting previously unselected package r-bioc-dexseq. 638s Preparing to unpack .../309-r-bioc-dexseq_1.48.0+dfsg-1_all.deb ... 638s Unpacking r-bioc-dexseq (1.48.0+dfsg-1) ... 638s Selecting previously unselected package r-bioc-genomicalignments. 638s Preparing to unpack .../310-r-bioc-genomicalignments_1.38.2-1_arm64.deb ... 638s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 638s Selecting previously unselected package r-cran-rjson. 638s Preparing to unpack .../311-r-cran-rjson_0.2.21-1_arm64.deb ... 638s Unpacking r-cran-rjson (0.2.21-1) ... 638s Selecting previously unselected package r-cran-restfulr. 638s Preparing to unpack .../312-r-cran-restfulr_0.0.15-1_arm64.deb ... 638s Unpacking r-cran-restfulr (0.0.15-1) ... 638s Selecting previously unselected package r-bioc-rtracklayer. 638s Preparing to unpack .../313-r-bioc-rtracklayer_1.62.0-1_arm64.deb ... 638s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 638s Selecting previously unselected package r-bioc-genomicfeatures. 638s Preparing to unpack .../314-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 638s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 638s Selecting previously unselected package r-bioc-rhdf5lib. 638s Preparing to unpack .../315-r-bioc-rhdf5lib_1.24.2+dfsg-1_arm64.deb ... 638s Unpacking r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 638s Selecting previously unselected package r-bioc-rhdf5filters. 638s Preparing to unpack .../316-r-bioc-rhdf5filters_1.14.1+dfsg-3_arm64.deb ... 638s Unpacking r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 638s Selecting previously unselected package r-bioc-rhdf5. 639s Preparing to unpack .../317-r-bioc-rhdf5_2.46.1+dfsg-1_arm64.deb ... 639s Unpacking r-bioc-rhdf5 (2.46.1+dfsg-1) ... 639s Selecting previously unselected package r-bioc-hdf5array. 639s Preparing to unpack .../318-r-bioc-hdf5array_1.30.1-1_arm64.deb ... 639s Unpacking r-bioc-hdf5array (1.30.1-1) ... 639s Selecting previously unselected package r-bioc-singlecellexperiment. 639s Preparing to unpack .../319-r-bioc-singlecellexperiment_1.24.0+ds-1_all.deb ... 639s Unpacking r-bioc-singlecellexperiment (1.24.0+ds-1) ... 639s Selecting previously unselected package r-bioc-glmgampoi. 639s Preparing to unpack .../320-r-bioc-glmgampoi_1.14.3+dfsg-1_arm64.deb ... 639s Unpacking r-bioc-glmgampoi (1.14.3+dfsg-1) ... 639s Selecting previously unselected package r-cran-brew. 639s Preparing to unpack .../321-r-cran-brew_1.0-10-1_all.deb ... 639s Unpacking r-cran-brew (1.0-10-1) ... 639s Selecting previously unselected package r-cran-brio. 639s Preparing to unpack .../322-r-cran-brio_1.1.4-1_arm64.deb ... 639s Unpacking r-cran-brio (1.1.4-1) ... 639s Selecting previously unselected package r-cran-ps. 639s Preparing to unpack .../323-r-cran-ps_1.7.6-1_arm64.deb ... 639s Unpacking r-cran-ps (1.7.6-1) ... 639s Selecting previously unselected package r-cran-processx. 639s Preparing to unpack .../324-r-cran-processx_3.8.3-1_arm64.deb ... 639s Unpacking r-cran-processx (3.8.3-1) ... 639s Selecting previously unselected package r-cran-callr. 639s Preparing to unpack .../325-r-cran-callr_3.7.3-2_all.deb ... 639s Unpacking r-cran-callr (3.7.3-2) ... 639s Selecting previously unselected package r-cran-desc. 639s Preparing to unpack .../326-r-cran-desc_1.4.3-1_all.deb ... 639s Unpacking r-cran-desc (1.4.3-1) ... 640s Selecting previously unselected package r-cran-diffobj. 640s Preparing to unpack .../327-r-cran-diffobj_0.3.5-1_arm64.deb ... 640s Unpacking r-cran-diffobj (0.3.5-1) ... 640s Selecting previously unselected package r-cran-pkgbuild. 640s Preparing to unpack .../328-r-cran-pkgbuild_1.4.3-1_all.deb ... 640s Unpacking r-cran-pkgbuild (1.4.3-1) ... 640s Selecting previously unselected package r-cran-rprojroot. 640s Preparing to unpack .../329-r-cran-rprojroot_2.0.4-1_all.deb ... 640s Unpacking r-cran-rprojroot (2.0.4-1) ... 640s Selecting previously unselected package r-cran-pkgload. 640s Preparing to unpack .../330-r-cran-pkgload_1.3.4-1_all.deb ... 640s Unpacking r-cran-pkgload (1.3.4-1) ... 640s Selecting previously unselected package r-cran-praise. 640s Preparing to unpack .../331-r-cran-praise_1.0.0-4build1_all.deb ... 640s Unpacking r-cran-praise (1.0.0-4build1) ... 640s Selecting previously unselected package r-cran-rematch2. 640s Preparing to unpack .../332-r-cran-rematch2_2.1.2-2build1_all.deb ... 640s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 640s Selecting previously unselected package r-cran-roxygen2. 641s Preparing to unpack .../333-r-cran-roxygen2_7.3.1-1_arm64.deb ... 641s Unpacking r-cran-roxygen2 (7.3.1-1) ... 641s Selecting previously unselected package r-cran-waldo. 641s Preparing to unpack .../334-r-cran-waldo_0.5.2-1build1_all.deb ... 641s Unpacking r-cran-waldo (0.5.2-1build1) ... 641s Selecting previously unselected package r-cran-testthat. 641s Preparing to unpack .../335-r-cran-testthat_3.2.1-1_arm64.deb ... 641s Unpacking r-cran-testthat (3.2.1-1) ... 641s Selecting previously unselected package autopkgtest-satdep. 641s Preparing to unpack .../336-1-autopkgtest-satdep.deb ... 641s Unpacking autopkgtest-satdep (0) ... 641s Setting up libjs-json (0~20221030+~1.0.8-1) ... 641s Setting up javascript-common (11+nmu1) ... 641s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 641s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 641s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 641s Setting up libpaper1:arm64 (1.1.29) ... 642s 642s Creating config file /etc/papersize with new version 642s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 642s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 642s Setting up libxpm4:arm64 (1:3.5.17-1) ... 642s Setting up hdf5-helpers (1.10.10+repack-3ubuntu1) ... 642s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 642s Setting up libxi6:arm64 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650s Setting up r-bioc-delayedmatrixstats (1.24.0+ds-1) ... 650s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 650s Setting up r-cran-testthat (3.2.1-1) ... 650s Setting up r-bioc-annotate (1.80.0+dfsg-1) ... 650s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 650s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 650s Setting up r-bioc-beachmat (2.18.1+ds-1) ... 650s Setting up r-bioc-genefilter (1.84.0-1) ... 650s Setting up r-bioc-genomicalignments (1.38.2-1) ... 650s Setting up r-bioc-geneplotter (1.80.0+dfsg-1) ... 650s Setting up r-cran-bookdown (0.37+dfsg-1) ... 650s Setting up r-bioc-rtracklayer (1.62.0-1) ... 650s Setting up r-bioc-singlecellexperiment (1.24.0+ds-1) ... 650s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 650s Setting up r-bioc-glmgampoi (1.14.3+dfsg-1) ... 650s Setting up r-bioc-dexseq (1.48.0+dfsg-1) ... 650s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 650s Setting up autopkgtest-satdep (0) ... 650s Processing triggers for man-db (2.12.0-3) ... 651s Processing triggers for install-info (7.1-3) ... 651s Processing triggers for libc-bin (2.39-0ubuntu2) ... 651s Processing triggers for tex-common (6.18) ... 652s Running updmap-sys. This may take some time... done. 652s Running mktexlsr /var/lib/texmf ... done. 652s Building format(s) --all. 689s This may take some time... done. 704s (Reading database ... 128864 files and directories currently installed.) 704s Removing autopkgtest-satdep (0) ... 704s autopkgtest [20:26:15]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 704s autopkgtest [20:26:15]: test pkg-r-autopkgtest: [----------------------- 705s Test: Try to load the R library DEXSeq 705s 705s R version 4.3.2 (2023-10-31) -- "Eye Holes" 705s Copyright (C) 2023 The R Foundation for Statistical Computing 705s Platform: aarch64-unknown-linux-gnu (64-bit) 705s 705s R is free software and comes with ABSOLUTELY NO WARRANTY. 705s You are welcome to redistribute it under certain conditions. 705s Type 'license()' or 'licence()' for distribution details. 705s 705s R is a collaborative project with many contributors. 705s Type 'contributors()' for more information and 705s 'citation()' on how to cite R or R packages in publications. 705s 705s Type 'demo()' for some demos, 'help()' for on-line help, or 705s 'help.start()' for an HTML browser interface to help. 705s Type 'q()' to quit R. 705s 705s > library('DEXSeq') 705s Loading required package: BiocParallel 705s Loading required package: Biobase 705s Loading required package: BiocGenerics 705s 705s Attaching package: ‘BiocGenerics’ 705s 705s The following objects are masked from ‘package:stats’: 705s 705s IQR, mad, sd, var, xtabs 705s 705s The following objects are masked from ‘package:base’: 705s 705s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 705s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 705s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 705s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 705s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 705s table, tapply, union, unique, unsplit, which.max, which.min 705s 706s Welcome to Bioconductor 706s 706s Vignettes contain introductory material; view with 706s 'browseVignettes()'. To cite Bioconductor, see 706s 'citation("Biobase")', and for packages 'citation("pkgname")'. 706s 706s Loading required package: SummarizedExperiment 706s Loading required package: MatrixGenerics 706s Loading required package: matrixStats 706s 706s Attaching package: ‘matrixStats’ 706s 706s The following objects are masked from ‘package:Biobase’: 706s 706s anyMissing, rowMedians 706s 706s 706s Attaching package: ‘MatrixGenerics’ 706s 706s The following objects are masked from ‘package:matrixStats’: 706s 706s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 706s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 706s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 706s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 706s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 706s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 706s colWeightedMeans, colWeightedMedians, colWeightedSds, 706s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 706s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 706s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 706s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 706s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 706s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 706s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 706s rowWeightedSds, rowWeightedVars 706s 706s The following object is masked from ‘package:Biobase’: 706s 706s rowMedians 706s 706s Loading required package: GenomicRanges 706s Loading required package: stats4 706s Loading required package: S4Vectors 706s 706s Attaching package: ‘S4Vectors’ 706s 706s The following object is masked from ‘package:utils’: 706s 706s findMatches 706s 706s The following objects are masked from ‘package:base’: 706s 706s expand.grid, I, unname 706s 706s Loading required package: IRanges 707s Loading required package: GenomeInfoDb 711s Loading required package: DESeq2 712s Loading required package: AnnotationDbi 713s Loading required package: RColorBrewer 715s > 715s > 716s Other tests are currently unsupported! 716s They will be progressively added. 717s autopkgtest [20:26:28]: test pkg-r-autopkgtest: -----------------------] 717s pkg-r-autopkgtest PASS 717s autopkgtest [20:26:28]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 718s autopkgtest [20:26:29]: @@@@@@@@@@@@@@@@@@@@ summary 718s pkg-r-autopkgtest PASS