0s autopkgtest [17:26:34]: starting date and time: 2024-03-16 17:26:34+0000 0s autopkgtest [17:26:34]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:26:34]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.7_ombhtp/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-delayedarray --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-19.secgroup --name adt-noble-arm64-r-bioc-delayedarray-20240316-172633-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 94s autopkgtest [17:28:08]: testbed dpkg architecture: arm64 94s autopkgtest [17:28:08]: testbed apt version: 2.7.12 94s autopkgtest [17:28:08]: @@@@@@@@@@@@@@@@@@@@ test bed setup 94s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 95s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 95s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 95s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 95s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 95s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 95s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 95s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 95s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 95s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB] 95s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 95s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 95s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 97s Fetched 9060 kB in 2s (4706 kB/s) 97s Reading package lists... 100s Reading package lists... 101s Building dependency tree... 101s Reading state information... 101s Calculating upgrade... 101s The following packages will be REMOVED: 101s libglib2.0-0 libssl3 101s The following NEW packages will be installed: 101s libglib2.0-0t64 libssl3t64 xdg-user-dirs 101s The following packages have been kept back: 101s curl 101s The following packages will be upgraded: 101s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 101s ubuntu-minimal ubuntu-standard 102s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 102s Need to get 4613 kB of archives. 102s After this operation, 211 kB of additional disk space will be used. 102s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 102s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 102s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 102s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 102s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 102s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 102s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 102s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 102s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 102s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 103s Fetched 4613 kB in 1s (6517 kB/s) 103s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 103s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 103s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 103s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 103s udisks2 depends on libglib2.0-0 (>= 2.77.0). 103s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 103s python3-gi depends on libglib2.0-0 (>= 2.77.0). 103s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 103s netplan.io depends on libglib2.0-0 (>= 2.70.0). 103s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 103s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 103s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 103s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 103s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 103s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 103s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 103s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 103s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 103s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 103s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 103s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 103s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 103s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 103s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 103s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 103s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 103s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 103s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 103s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 103s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 103s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 103s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 103s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 103s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 103s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 103s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 103s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 103s fwupd depends on libglib2.0-0 (>= 2.79.0). 103s bolt depends on libglib2.0-0 (>= 2.56.0). 103s 103s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 103s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 103s Selecting previously unselected package libglib2.0-0t64:arm64. 103s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 103s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 103s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 103s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 103s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 103s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 103s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 103s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 103s wget depends on libssl3 (>= 3.0.0). 103s u-boot-tools depends on libssl3 (>= 3.0.0). 103s tnftp depends on libssl3 (>= 3.0.0). 103s tcpdump depends on libssl3 (>= 3.0.0). 103s systemd-resolved depends on libssl3 (>= 3.0.0). 103s systemd depends on libssl3 (>= 3.0.0). 103s sudo depends on libssl3 (>= 3.0.0). 103s sbsigntool depends on libssl3 (>= 3.0.0). 103s rsync depends on libssl3 (>= 3.0.0). 103s python3-cryptography depends on libssl3 (>= 3.0.0). 103s openssh-server depends on libssl3 (>= 3.0.10). 103s openssh-client depends on libssl3 (>= 3.0.10). 103s mtd-utils depends on libssl3 (>= 3.0.0). 103s mokutil depends on libssl3 (>= 3.0.0). 103s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 103s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 103s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 103s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 103s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 103s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 103s libnvme1 depends on libssl3 (>= 3.0.0). 103s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 103s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 103s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 103s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 103s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 103s kmod depends on libssl3 (>= 3.0.0). 103s dhcpcd-base depends on libssl3 (>= 3.0.0). 103s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 103s 104s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 104s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 104s Selecting previously unselected package libssl3t64:arm64. 104s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 104s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 104s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 104s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 104s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 104s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 104s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 104s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 104s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 104s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 104s Unpacking ubuntu-minimal (1.536) over (1.535) ... 104s Selecting previously unselected package xdg-user-dirs. 104s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 104s Unpacking xdg-user-dirs (0.18-1) ... 104s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 104s Unpacking ubuntu-standard (1.536) over (1.535) ... 104s Setting up ubuntu-minimal (1.536) ... 104s Setting up xdg-user-dirs (0.18-1) ... 104s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 104s Setting up libtirpc-common (1.3.4+ds-1.1) ... 104s Setting up ubuntu-standard (1.536) ... 104s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 104s No schema files found: doing nothing. 104s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 104s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 104s Setting up openssl (3.0.13-0ubuntu1) ... 104s Setting up readline-common (8.2-3.1) ... 104s Processing triggers for man-db (2.12.0-3) ... 105s Processing triggers for install-info (7.1-3) ... 105s Processing triggers for libc-bin (2.39-0ubuntu2) ... 105s Reading package lists... 106s Building dependency tree... 106s Reading state information... 106s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 107s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 107s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 107s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 107s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 108s Reading package lists... 108s Reading package lists... 109s Building dependency tree... 109s Reading state information... 109s Calculating upgrade... 110s The following packages have been kept back: 110s curl 110s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 110s Reading package lists... 111s Building dependency tree... 111s Reading state information... 111s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 115s autopkgtest [17:28:29]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 115s autopkgtest [17:28:29]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-delayedarray 117s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-delayedarray 0.28.0+dfsg-1 (dsc) [2320 B] 117s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-delayedarray 0.28.0+dfsg-1 (tar) [321 kB] 117s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-delayedarray 0.28.0+dfsg-1 (diff) [5080 B] 117s gpgv: Signature made Thu Nov 30 01:45:30 2023 UTC 117s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 117s gpgv: issuer "plessy@debian.org" 117s gpgv: Can't check signature: No public key 117s dpkg-source: warning: cannot verify inline signature for ./r-bioc-delayedarray_0.28.0+dfsg-1.dsc: no acceptable signature found 117s autopkgtest [17:28:31]: testing package r-bioc-delayedarray version 0.28.0+dfsg-1 118s autopkgtest [17:28:32]: build not needed 119s autopkgtest [17:28:33]: test pkg-r-autopkgtest: preparing testbed 120s Reading package lists... 121s Building dependency tree... 121s Reading state information... 122s Starting pkgProblemResolver with broken count: 0 122s Starting 2 pkgProblemResolver with broken count: 0 122s Done 123s The following additional packages will be installed: 123s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 123s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 123s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 123s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 123s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 123s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 123s gfortran-aarch64-linux-gnu hdf5-helpers icu-devtools javascript-common 123s libaec-dev libaec0 libasan8 libatomic1 libbibtex-parser-perl libblas-dev 123s libblas3 libblosc1 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 123s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4-openssl-dev libcurl4t64 123s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 123s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1 123s libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 123s libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libhwasan0 libice6 libicu-dev 123s libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 123s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 123s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 123s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 123s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 123s libjs-popper.js libjs-prettify libjs-sifter.js 123s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 123s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 123s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 123s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 123s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 123s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 123s libreadline8t64 libsharpyuv0 libsm6 libsnappy1v5 libssl-dev libstdc++-13-dev 123s libsynctex2 libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 123s libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 123s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 123s libxrender1 libxss1 libxt6t64 libzzip-0-13 linux-libc-dev littler 123s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 123s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 123s r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics 123s r-bioc-biocparallel r-bioc-biocstyle r-bioc-biostrings r-bioc-delayedarray 123s r-bioc-delayedmatrixstats r-bioc-genefilter r-bioc-genomeinfodb 123s r-bioc-genomeinfodbdata r-bioc-genomicranges r-bioc-hdf5array r-bioc-iranges 123s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters 123s r-bioc-rhdf5lib r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 123s r-bioc-sparsematrixstats r-bioc-summarizedexperiment r-bioc-xvector 123s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh 123s r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 123s r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli r-cran-codetools 123s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 123s r-cran-digest r-cran-ellipsis r-cran-evaluate r-cran-fastmap 123s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 123s r-cran-futile.options r-cran-glue r-cran-highr r-cran-htmltools 123s r-cran-httpuv r-cran-httr r-cran-jquerylib r-cran-jsonlite r-cran-knitr 123s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler 123s r-cran-lobstr r-cran-magrittr r-cran-matrix r-cran-matrixstats 123s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pkgconfig r-cran-pkgkitten 123s r-cran-plogr r-cran-png r-cran-prettyunits r-cran-promises r-cran-r6 123s r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-rmarkdown 123s r-cran-rsqlite r-cran-runit r-cran-sass r-cran-shiny r-cran-snow 123s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 123s r-cran-tinytex r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml 123s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 123s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 123s xdg-utils zip zlib1g-dev 123s Suggested packages: 123s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 123s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 123s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 123s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 123s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 123s libboost-context1.83-dev libboost-contract1.83-dev 123s libboost-coroutine1.83-dev libboost-date-time1.83-dev 123s libboost-exception1.83-dev libboost-fiber1.83-dev 123s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 123s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 123s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 123s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 123s libboost-numpy1.83-dev libboost-program-options1.83-dev 123s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 123s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 123s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 123s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 123s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 123s glibc-doc libcurl4-doc libidn-dev libkrb5-dev libldap2-dev librtmp-dev 123s libssh2-1-dev libhdf5-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras 123s fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libssl-doc 123s libstdc++-13-doc tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex 123s texlive-luatex pandoc-citeproc texlive-latex-extra context wkhtmltopdf 123s librsvg2-bin groff ghc php python ruby libjs-katex 123s citation-style-language-styles elpa-ess r-doc-info | r-doc-pdf r-mathlib 123s r-base-html texlive-plain-generic texlive-fonts-recommended 123s texlive-fonts-extra texlive-extra-utils texinfo r-bioc-go.db 123s r-bioc-org.hs.eg.db r-bioc-graph r-bioc-all r-bioc-rsamtools r-bioc-affy 123s r-bioc-deseq2 r-cran-foreach r-cran-bbmisc r-cran-doparallel 123s r-bioc-variantannotation r-bioc-genomicalignments r-bioc-shortread 123s r-cran-batchtools r-cran-data.table r-bioc-bsgenome r-bioc-genomicfeatures 123s r-cran-testthat r-cran-profmem r-cran-class r-cran-rcolorbrewer 123s r-cran-r.utils r-bioc-rtracklayer r-bioc-gviz r-bioc-annotationhub 123s r-bioc-dexseq r-bioc-edger r-bioc-experimenthub r-bioc-singlecellexperiment 123s r-cran-markdown r-cran-bench r-cran-dplyr r-cran-ggplot2 r-cran-mockery 123s r-cran-tinytest r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-pillar 123s r-cran-rstudioapi r-cran-rmysql r-cran-getopt r-cran-inline r-cran-rmpi 123s r-cran-rlecuyer r-cran-spelling r-cran-callr r-cran-plm r-cran-zoo debhelper 123s ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec 123s texlive-binaries-sse2 hintview texlive-latex-base-doc wp2latex 123s Recommended packages: 123s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 123s r-recommended r-doc-html r-cran-testthat r-bioc-biocversion r-cran-remotes 123s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 123s r-cran-rsconnect r-cran-tibble r-cran-testit r-cran-tufte r-cran-xml2 123s r-cran-webshot r-cran-ggplot2 r-cran-thematic r-cran-callr r-cran-covr 123s r-cran-mockery r-cran-processx r-cran-ps r-cran-rprojroot r-cran-whoami 123s r-cran-bench r-cran-brio r-cran-decor r-cran-desc r-cran-progress 123s r-cran-scales r-cran-spelling r-cran-webutils r-cran-dplyr r-cran-rsvg 123s r-cran-pillar r-cran-waldo r-cran-cairo r-cran-markdown r-cran-ragg 123s r-cran-jpeg r-cran-readr r-cran-r.rsp r-cran-sf r-cran-gridsvg r-cran-magick 123s r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-svglite 123s node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-r.devices 123s r-cran-sodium r-cran-future r-cran-purrr r-cran-usethis r-cran-dygraphs 123s r-cran-dbitest r-cran-gert r-cran-gh r-cran-hms r-cran-rvest r-cran-generics 123s r-cran-pkgdown r-cran-zeallot r-cran-renv lmodern dvisvgm 123s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 123s x11-xserver-utils 123s The following packages will be REMOVED: 123s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 123s The following NEW packages will be installed: 123s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 123s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 123s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 123s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 123s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 123s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 123s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu hdf5-helpers 123s icu-devtools javascript-common libaec-dev libaec0 libasan8 libatomic1 123s libbibtex-parser-perl libblas-dev libblas3 libblosc1 libboost-dev 123s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 123s libcrypt-dev libcurl4-openssl-dev libcurl4t64 libdatrie1 libdeflate0 123s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 123s libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev 123s libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 123s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 123s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 123s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 123s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 123s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 123s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 123s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 123s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 123s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 123s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 123s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 123s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 123s libreadline8t64 libsharpyuv0 libsm6 libsnappy1v5 libssl-dev libstdc++-13-dev 123s libsynctex2 libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 123s libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 123s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 123s libxrender1 libxss1 libxt6t64 libzzip-0-13 linux-libc-dev littler 123s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 123s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 123s r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics 123s r-bioc-biocparallel r-bioc-biocstyle r-bioc-biostrings r-bioc-delayedarray 123s r-bioc-delayedmatrixstats r-bioc-genefilter r-bioc-genomeinfodb 123s r-bioc-genomeinfodbdata r-bioc-genomicranges r-bioc-hdf5array r-bioc-iranges 123s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters 123s r-bioc-rhdf5lib r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 123s r-bioc-sparsematrixstats r-bioc-summarizedexperiment r-bioc-xvector 123s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh 123s r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 123s r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli r-cran-codetools 123s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 123s r-cran-digest r-cran-ellipsis r-cran-evaluate r-cran-fastmap 123s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 123s r-cran-futile.options r-cran-glue r-cran-highr r-cran-htmltools 123s r-cran-httpuv r-cran-httr r-cran-jquerylib r-cran-jsonlite r-cran-knitr 123s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler 123s r-cran-lobstr r-cran-magrittr r-cran-matrix r-cran-matrixstats 123s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pkgconfig r-cran-pkgkitten 123s r-cran-plogr r-cran-png r-cran-prettyunits r-cran-promises r-cran-r6 123s r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-rmarkdown 123s r-cran-rsqlite r-cran-runit r-cran-sass r-cran-shiny r-cran-snow 123s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 123s r-cran-tinytex r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml 123s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 123s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 123s xdg-utils zip zlib1g-dev 123s The following packages will be upgraded: 123s curl 123s 1 upgraded, 282 newly installed, 5 to remove and 0 not upgraded. 123s Need to get 421 MB/421 MB of archives. 123s After this operation, 1353 MB of additional disk space will be used. 123s Get:1 /tmp/autopkgtest.tAocl1/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [832 B] 123s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 123s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 123s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 123s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 123s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 123s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 123s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 123s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 123s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 123s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 123s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 123s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 123s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 123s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 123s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 123s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 124s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 124s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 124s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 124s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 124s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 124s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 124s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 124s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 124s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 124s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 124s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 124s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 124s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 124s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 124s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 124s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 124s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 124s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 124s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 125s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 125s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 125s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 125s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 125s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 125s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 125s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 125s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 125s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 125s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 125s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 125s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 125s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 125s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 125s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 125s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 125s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 125s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 125s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 125s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 125s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 hdf5-helpers arm64 1.10.10+repack-3ubuntu1 [15.5 kB] 125s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 125s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 125s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 125s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 125s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 125s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 125s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 125s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 125s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libsnappy1v5 arm64 1.1.10-1 [28.2 kB] 125s Get:67 http://ftpmaster.internal/ubuntu noble/universe arm64 libblosc1 arm64 1.21.5+ds-1 [25.5 kB] 125s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 126s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 126s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 126s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 126s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 126s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 126s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 126s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 126s Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4-openssl-dev arm64 8.5.0-2ubuntu7 [454 kB] 126s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 126s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 126s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 126s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 126s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 126s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.10+repack-3ubuntu1 [1189 kB] 126s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-cpp-103-1 arm64 1.10.10+repack-3ubuntu1 [120 kB] 126s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-fortran-102 arm64 1.10.10+repack-3ubuntu1 [86.3 kB] 126s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB] 126s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-fortran-100 arm64 1.10.10+repack-3ubuntu1 [30.7 kB] 126s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-cpp-100 arm64 1.10.10+repack-3ubuntu1 [10.7 kB] 126s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 126s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 126s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 126s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 126s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 126s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 126s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec-dev arm64 1.1.2-1 [18.8 kB] 126s Get:95 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl-dev arm64 3.0.13-0ubuntu1 [2335 kB] 126s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-dev arm64 1.10.10+repack-3ubuntu1 [3036 kB] 126s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 126s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 126s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 126s Get:100 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 126s Get:101 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 126s Get:102 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 126s Get:103 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 127s Get:104 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 127s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 127s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 127s Get:107 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 127s Get:108 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 127s Get:109 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 127s Get:110 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 127s Get:111 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 127s Get:112 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 127s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 127s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 127s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 127s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 127s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 127s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 127s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 127s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 127s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 127s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 127s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 127s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 127s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 127s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 127s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 127s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 127s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 127s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 127s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 127s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 127s Get:133 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 127s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 127s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 127s Get:136 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 127s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 127s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 127s Get:139 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 127s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 127s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 127s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 127s Get:143 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 127s Get:144 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 127s Get:145 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 127s Get:146 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 127s Get:147 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 127s Get:148 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 127s Get:149 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 127s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 127s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 127s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 127s Get:153 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 127s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 127s Get:155 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 127s Get:156 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 127s Get:157 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 127s Get:158 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 128s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 128s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 128s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 128s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 128s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 128s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 128s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 129s Get:166 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 129s Get:167 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 129s Get:168 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 129s Get:169 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 129s Get:170 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 129s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 129s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 129s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 129s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 129s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 129s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 129s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 129s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 129s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 129s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 129s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 129s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 129s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 129s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 129s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 129s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 129s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 129s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 129s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 129s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 129s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 129s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 129s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 129s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 129s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 129s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 129s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 129s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 129s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 129s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 129s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 129s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 129s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 129s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 130s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 130s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 130s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 130s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 131s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 131s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 131s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 131s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 131s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotate all 1.80.0+dfsg-1 [1730 kB] 131s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 131s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 131s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 131s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 131s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 131s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 131s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 131s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 131s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 131s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 131s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 131s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 131s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 131s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 131s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 131s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 131s Get:230 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 132s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 132s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 132s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 132s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 132s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 132s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 132s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 132s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 132s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 132s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 132s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 132s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 132s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 132s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 132s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 132s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 132s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 132s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 132s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 132s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 132s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 132s Get:252 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 132s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 132s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 132s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 132s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 132s Get:257 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 132s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 133s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 133s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 133s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 136s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 136s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 136s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 136s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 136s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 137s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 137s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 137s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 137s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 137s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsematrixstats arm64 1.14.0+dfsg-1 [815 kB] 137s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedmatrixstats all 1.24.0+ds-1 [483 kB] 137s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-survival arm64 3.5-8-1 [6116 kB] 137s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genefilter arm64 1.84.0-1 [1122 kB] 137s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 137s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5lib arm64 1.24.2+dfsg-1 [96.1 kB] 137s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5filters arm64 1.14.1+dfsg-3 [135 kB] 137s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhdf5 arm64 2.46.1+dfsg-1 [805 kB] 137s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-hdf5array arm64 1.30.1-1 [8757 kB] 137s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 137s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 137s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lobstr arm64 1.1.2-1 [136 kB] 137s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-runit all 0.4.32-3 [283 kB] 139s Preconfiguring packages ... 139s Fetched 421 MB in 15s (28.7 MB/s) 139s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 139s wget depends on libpsl5 (>= 0.16.0). 139s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 139s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 139s 139s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 139s Removing libpsl5:arm64 (0.21.2-1build1) ... 139s Selecting previously unselected package libpsl5t64:arm64. 139s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 139s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 139s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 139s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 139s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 139s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 139s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 139s Selecting previously unselected package libcurl4t64:arm64. 139s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 139s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 139s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 140s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 140s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 140s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 140s 140s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 140s Removing libpng16-16:arm64 (1.6.43-1) ... 140s Selecting previously unselected package libpng16-16t64:arm64. 140s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 140s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 140s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 140s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 140s parted depends on libreadline8 (>= 6.0). 140s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 140s gpgsm depends on libreadline8 (>= 6.0). 140s gpgconf depends on libreadline8 (>= 6.0). 140s gpg depends on libreadline8 (>= 6.0). 140s gawk depends on libreadline8 (>= 6.0). 140s fdisk depends on libreadline8 (>= 6.0). 140s 140s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 140s Removing libreadline8:arm64 (8.2-3) ... 140s Selecting previously unselected package libreadline8t64:arm64. 140s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 140s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 140s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 140s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 140s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 140s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 140s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 140s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 140s lsof depends on libtirpc3 (>= 1.0.2). 140s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 140s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 140s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 140s iproute2 depends on libtirpc3 (>= 1.0.2). 140s 140s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 140s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 140s Selecting previously unselected package libtirpc3t64:arm64. 140s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 140s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 140s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 140s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 140s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 140s Selecting previously unselected package libc-dev-bin. 140s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 140s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 140s Selecting previously unselected package linux-libc-dev:arm64. 140s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 140s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 141s Selecting previously unselected package libcrypt-dev:arm64. 141s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 141s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 141s Selecting previously unselected package libtirpc-dev:arm64. 141s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 141s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 141s Selecting previously unselected package libnsl-dev:arm64. 141s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 141s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 141s Selecting previously unselected package rpcsvc-proto. 141s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 141s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 141s Selecting previously unselected package libc6-dev:arm64. 141s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 141s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 141s Selecting previously unselected package libisl23:arm64. 141s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 141s Unpacking libisl23:arm64 (0.26-3) ... 141s Selecting previously unselected package libmpc3:arm64. 141s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 141s Unpacking libmpc3:arm64 (1.3.1-1) ... 141s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 141s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 141s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 141s Selecting previously unselected package cpp-13. 142s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 142s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 142s Selecting previously unselected package cpp-aarch64-linux-gnu. 142s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 142s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 142s Selecting previously unselected package cpp. 143s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 143s Unpacking cpp (4:13.2.0-7ubuntu1) ... 143s Selecting previously unselected package libcc1-0:arm64. 143s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 143s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 143s Selecting previously unselected package libgomp1:arm64. 143s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 143s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 143s Selecting previously unselected package libitm1:arm64. 147s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 148s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 149s Selecting previously unselected package libatomic1:arm64. 149s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 149s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 149s Selecting previously unselected package libasan8:arm64. 149s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 149s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 150s Selecting previously unselected package liblsan0:arm64. 150s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 150s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 150s Selecting previously unselected package libtsan2:arm64. 150s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 150s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 150s Selecting previously unselected package libubsan1:arm64. 150s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 150s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 150s Selecting previously unselected package libhwasan0:arm64. 150s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 150s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 150s Selecting previously unselected package libgcc-13-dev:arm64. 150s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 150s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 150s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 150s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 150s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 151s Selecting previously unselected package gcc-13. 151s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 151s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 151s Selecting previously unselected package gcc-aarch64-linux-gnu. 151s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 151s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 151s Selecting previously unselected package gcc. 151s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 151s Unpacking gcc (4:13.2.0-7ubuntu1) ... 151s Selecting previously unselected package libstdc++-13-dev:arm64. 151s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 151s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 151s Selecting previously unselected package g++-13-aarch64-linux-gnu. 151s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 151s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 151s Selecting previously unselected package g++-13. 151s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 151s Unpacking g++-13 (13.2.0-17ubuntu2) ... 151s Selecting previously unselected package g++-aarch64-linux-gnu. 151s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 151s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 151s Selecting previously unselected package g++. 151s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 151s Unpacking g++ (4:13.2.0-7ubuntu1) ... 151s Selecting previously unselected package build-essential. 151s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 151s Unpacking build-essential (12.10ubuntu1) ... 151s Selecting previously unselected package dctrl-tools. 151s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 151s Unpacking dctrl-tools (2.24-3build2) ... 151s Selecting previously unselected package fonts-dejavu-mono. 151s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 151s Unpacking fonts-dejavu-mono (2.37-8) ... 151s Selecting previously unselected package fonts-dejavu-core. 151s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 151s Unpacking fonts-dejavu-core (2.37-8) ... 151s Selecting previously unselected package fontconfig-config. 151s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 152s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 152s Selecting previously unselected package libfontconfig1:arm64. 152s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 152s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 152s Selecting previously unselected package fontconfig. 152s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 152s Unpacking fontconfig (2.15.0-1ubuntu1) ... 152s Selecting previously unselected package fonts-font-awesome. 152s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 152s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 152s Selecting previously unselected package fonts-glyphicons-halflings. 152s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 152s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 152s Selecting previously unselected package fonts-lmodern. 152s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 152s Unpacking fonts-lmodern (2.005-1) ... 152s Selecting previously unselected package fonts-mathjax. 152s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 152s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 152s Selecting previously unselected package libgfortran5:arm64. 152s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 152s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 152s Selecting previously unselected package libgfortran-13-dev:arm64. 152s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 152s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 152s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 152s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 152s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 153s Selecting previously unselected package gfortran-13. 153s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 153s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 153s Selecting previously unselected package gfortran-aarch64-linux-gnu. 153s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 153s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 153s Selecting previously unselected package gfortran. 153s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 153s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 153s Selecting previously unselected package hdf5-helpers. 153s Preparing to unpack .../050-hdf5-helpers_1.10.10+repack-3ubuntu1_arm64.deb ... 153s Unpacking hdf5-helpers (1.10.10+repack-3ubuntu1) ... 153s Selecting previously unselected package icu-devtools. 153s Preparing to unpack .../051-icu-devtools_74.2-1ubuntu1_arm64.deb ... 153s Unpacking icu-devtools (74.2-1ubuntu1) ... 153s Selecting previously unselected package javascript-common. 153s Preparing to unpack .../052-javascript-common_11+nmu1_all.deb ... 153s Unpacking javascript-common (11+nmu1) ... 153s Selecting previously unselected package libaec0:arm64. 153s Preparing to unpack .../053-libaec0_1.1.2-1_arm64.deb ... 153s Unpacking libaec0:arm64 (1.1.2-1) ... 153s Selecting previously unselected package libio-string-perl. 153s Preparing to unpack .../054-libio-string-perl_1.08-4_all.deb ... 153s Unpacking libio-string-perl (1.08-4) ... 153s Selecting previously unselected package liblatex-tounicode-perl. 153s Preparing to unpack .../055-liblatex-tounicode-perl_0.54-2_all.deb ... 153s Unpacking liblatex-tounicode-perl (0.54-2) ... 153s Selecting previously unselected package libbibtex-parser-perl. 153s Preparing to unpack .../056-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 153s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 153s Selecting previously unselected package libblas3:arm64. 153s Preparing to unpack .../057-libblas3_3.12.0-3_arm64.deb ... 153s Unpacking libblas3:arm64 (3.12.0-3) ... 153s Selecting previously unselected package libblas-dev:arm64. 153s Preparing to unpack .../058-libblas-dev_3.12.0-3_arm64.deb ... 153s Unpacking libblas-dev:arm64 (3.12.0-3) ... 153s Selecting previously unselected package libsnappy1v5:arm64. 153s Preparing to unpack .../059-libsnappy1v5_1.1.10-1_arm64.deb ... 153s Unpacking libsnappy1v5:arm64 (1.1.10-1) ... 153s Selecting previously unselected package libblosc1:arm64. 153s Preparing to unpack .../060-libblosc1_1.21.5+ds-1_arm64.deb ... 153s Unpacking libblosc1:arm64 (1.21.5+ds-1) ... 153s Selecting previously unselected package libboost1.83-dev:arm64. 153s Preparing to unpack .../061-libboost1.83-dev_1.83.0-2ubuntu1_arm64.deb ... 153s Unpacking libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 155s Selecting previously unselected package libboost-dev:arm64. 155s Preparing to unpack .../062-libboost-dev_1.83.0.1ubuntu2_arm64.deb ... 155s Unpacking libboost-dev:arm64 (1.83.0.1ubuntu2) ... 155s Selecting previously unselected package libbz2-dev:arm64. 155s Preparing to unpack .../063-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 155s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 155s Selecting previously unselected package libpixman-1-0:arm64. 155s Preparing to unpack .../064-libpixman-1-0_0.42.2-1_arm64.deb ... 155s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 155s Selecting previously unselected package libxcb-render0:arm64. 155s Preparing to unpack .../065-libxcb-render0_1.15-1_arm64.deb ... 155s Unpacking libxcb-render0:arm64 (1.15-1) ... 155s Selecting previously unselected package libxcb-shm0:arm64. 155s Preparing to unpack .../066-libxcb-shm0_1.15-1_arm64.deb ... 155s Unpacking libxcb-shm0:arm64 (1.15-1) ... 155s Selecting previously unselected package libxrender1:arm64. 155s Preparing to unpack .../067-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 155s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 155s Selecting previously unselected package libcairo2:arm64. 155s Preparing to unpack .../068-libcairo2_1.18.0-1_arm64.deb ... 155s Unpacking libcairo2:arm64 (1.18.0-1) ... 155s Selecting previously unselected package libcurl4-openssl-dev:arm64. 155s Preparing to unpack .../069-libcurl4-openssl-dev_8.5.0-2ubuntu7_arm64.deb ... 155s Unpacking libcurl4-openssl-dev:arm64 (8.5.0-2ubuntu7) ... 155s Selecting previously unselected package libdatrie1:arm64. 155s Preparing to unpack .../070-libdatrie1_0.2.13-3_arm64.deb ... 155s Unpacking libdatrie1:arm64 (0.2.13-3) ... 155s Selecting previously unselected package libdeflate0:arm64. 155s Preparing to unpack .../071-libdeflate0_1.19-1_arm64.deb ... 155s Unpacking libdeflate0:arm64 (1.19-1) ... 155s Selecting previously unselected package libgraphite2-3:arm64. 155s Preparing to unpack .../072-libgraphite2-3_1.3.14-2_arm64.deb ... 155s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 155s Selecting previously unselected package libharfbuzz0b:arm64. 155s Preparing to unpack .../073-libharfbuzz0b_8.3.0-2_arm64.deb ... 155s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 155s Selecting previously unselected package libsz2:arm64. 155s Preparing to unpack .../074-libsz2_1.1.2-1_arm64.deb ... 155s Unpacking libsz2:arm64 (1.1.2-1) ... 155s Selecting previously unselected package libhdf5-103-1:arm64. 155s Preparing to unpack .../075-libhdf5-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 155s Unpacking libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 155s Selecting previously unselected package libhdf5-cpp-103-1:arm64. 155s Preparing to unpack .../076-libhdf5-cpp-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 155s Unpacking libhdf5-cpp-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 155s Selecting previously unselected package libhdf5-fortran-102:arm64. 156s Preparing to unpack .../077-libhdf5-fortran-102_1.10.10+repack-3ubuntu1_arm64.deb ... 156s Unpacking libhdf5-fortran-102:arm64 (1.10.10+repack-3ubuntu1) ... 156s Selecting previously unselected package libhdf5-hl-100:arm64. 156s Preparing to unpack .../078-libhdf5-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ... 156s Unpacking libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 156s Selecting previously unselected package libhdf5-hl-fortran-100:arm64. 156s Preparing to unpack .../079-libhdf5-hl-fortran-100_1.10.10+repack-3ubuntu1_arm64.deb ... 156s Unpacking libhdf5-hl-fortran-100:arm64 (1.10.10+repack-3ubuntu1) ... 156s Selecting previously unselected package libhdf5-hl-cpp-100:arm64. 156s Preparing to unpack .../080-libhdf5-hl-cpp-100_1.10.10+repack-3ubuntu1_arm64.deb ... 156s Unpacking libhdf5-hl-cpp-100:arm64 (1.10.10+repack-3ubuntu1) ... 156s Selecting previously unselected package zlib1g-dev:arm64. 156s Preparing to unpack .../081-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 156s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 156s Selecting previously unselected package libjpeg-turbo8:arm64. 156s Preparing to unpack .../082-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 156s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 156s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 156s Preparing to unpack .../083-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 156s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 156s Selecting previously unselected package libjpeg8:arm64. 156s Preparing to unpack .../084-libjpeg8_8c-2ubuntu11_arm64.deb ... 156s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 156s Selecting previously unselected package libjpeg8-dev:arm64. 156s Preparing to unpack .../085-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 156s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 156s Selecting previously unselected package libjpeg-dev:arm64. 156s Preparing to unpack .../086-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 156s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 156s Selecting previously unselected package libaec-dev:arm64. 156s Preparing to unpack .../087-libaec-dev_1.1.2-1_arm64.deb ... 156s Unpacking libaec-dev:arm64 (1.1.2-1) ... 156s Selecting previously unselected package libssl-dev:arm64. 156s Preparing to unpack .../088-libssl-dev_3.0.13-0ubuntu1_arm64.deb ... 156s Unpacking libssl-dev:arm64 (3.0.13-0ubuntu1) ... 156s Selecting previously unselected package libhdf5-dev. 156s Preparing to unpack .../089-libhdf5-dev_1.10.10+repack-3ubuntu1_arm64.deb ... 156s Unpacking libhdf5-dev (1.10.10+repack-3ubuntu1) ... 157s Selecting previously unselected package x11-common. 157s Preparing to unpack .../090-x11-common_1%3a7.7+23ubuntu2_all.deb ... 157s Unpacking x11-common (1:7.7+23ubuntu2) ... 157s Selecting previously unselected package libice6:arm64. 157s Preparing to unpack .../091-libice6_2%3a1.0.10-1build2_arm64.deb ... 157s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 157s Selecting previously unselected package libicu-dev:arm64. 157s Preparing to unpack .../092-libicu-dev_74.2-1ubuntu1_arm64.deb ... 157s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 157s Selecting previously unselected package libjs-bootstrap. 157s Preparing to unpack .../093-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 157s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 157s Selecting previously unselected package libjs-popper.js. 157s Preparing to unpack .../094-libjs-popper.js_1.16.1+ds-6_all.deb ... 157s Unpacking libjs-popper.js (1.16.1+ds-6) ... 157s Selecting previously unselected package libjs-bootstrap4. 157s Preparing to unpack .../095-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 157s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 157s Selecting previously unselected package libjs-d3. 157s Preparing to unpack .../096-libjs-d3_3.5.17-4_all.deb ... 157s Unpacking libjs-d3 (3.5.17-4) ... 157s Selecting previously unselected package libjs-es5-shim. 157s Preparing to unpack .../097-libjs-es5-shim_4.6.7-2_all.deb ... 157s Unpacking libjs-es5-shim (4.6.7-2) ... 157s Selecting previously unselected package libjs-highlight.js. 157s Preparing to unpack .../098-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 157s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 157s Selecting previously unselected package libjs-jquery. 157s Preparing to unpack .../099-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 157s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 157s Selecting previously unselected package libjs-jquery-datatables. 157s Preparing to unpack .../100-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 157s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 157s Selecting previously unselected package libjs-sifter.js. 157s Preparing to unpack .../101-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 157s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 157s Selecting previously unselected package libjs-microplugin.js. 157s Preparing to unpack .../102-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 157s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 157s Selecting previously unselected package libjs-jquery-selectize.js. 158s Preparing to unpack .../103-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 158s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 158s Selecting previously unselected package libjs-jquery-ui. 158s Preparing to unpack .../104-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 158s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 158s Selecting previously unselected package libjs-json. 158s Preparing to unpack .../105-libjs-json_0~20221030+~1.0.8-1_all.deb ... 158s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 158s Selecting previously unselected package libjs-lunr. 158s Preparing to unpack .../106-libjs-lunr_2.3.9~dfsg-2_all.deb ... 158s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 158s Selecting previously unselected package libjs-prettify. 158s Preparing to unpack .../107-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 158s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 158s Selecting previously unselected package libkpathsea6:arm64. 158s Preparing to unpack .../108-libkpathsea6_2023.20230311.66589-9_arm64.deb ... 158s Unpacking libkpathsea6:arm64 (2023.20230311.66589-9) ... 158s Selecting previously unselected package liblapack3:arm64. 158s Preparing to unpack .../109-liblapack3_3.12.0-3_arm64.deb ... 158s Unpacking liblapack3:arm64 (3.12.0-3) ... 158s Selecting previously unselected package liblapack-dev:arm64. 158s Preparing to unpack .../110-liblapack-dev_3.12.0-3_arm64.deb ... 158s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 158s Selecting previously unselected package liblerc4:arm64. 158s Preparing to unpack .../111-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 158s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 158s Selecting previously unselected package liblua5.4-0:arm64. 158s Preparing to unpack .../112-liblua5.4-0_5.4.6-3_arm64.deb ... 158s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 158s Selecting previously unselected package libncurses-dev:arm64. 158s Preparing to unpack .../113-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 158s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 159s Selecting previously unselected package libthai-data. 159s Preparing to unpack .../114-libthai-data_0.1.29-2_all.deb ... 159s Unpacking libthai-data (0.1.29-2) ... 159s Selecting previously unselected package libthai0:arm64. 159s Preparing to unpack .../115-libthai0_0.1.29-2_arm64.deb ... 159s Unpacking libthai0:arm64 (0.1.29-2) ... 159s Selecting previously unselected package libpango-1.0-0:arm64. 159s Preparing to unpack .../116-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 159s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 159s Selecting previously unselected package libpangoft2-1.0-0:arm64. 159s Preparing to unpack .../117-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 159s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 159s Selecting previously unselected package libpangocairo-1.0-0:arm64. 159s Preparing to unpack .../118-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 159s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 159s Selecting previously unselected package libpaper1:arm64. 159s Preparing to unpack .../119-libpaper1_1.1.29_arm64.deb ... 159s Unpacking libpaper1:arm64 (1.1.29) ... 159s Selecting previously unselected package libpaper-utils. 159s Preparing to unpack .../120-libpaper-utils_1.1.29_arm64.deb ... 159s Unpacking libpaper-utils (1.1.29) ... 159s Selecting previously unselected package libpcre2-16-0:arm64. 159s Preparing to unpack .../121-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 159s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 159s Selecting previously unselected package libpcre2-32-0:arm64. 159s Preparing to unpack .../122-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 159s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 160s Selecting previously unselected package libpcre2-posix3:arm64. 160s Preparing to unpack .../123-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 160s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 160s Selecting previously unselected package libpcre2-dev:arm64. 160s Preparing to unpack .../124-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 160s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 160s Selecting previously unselected package libpkgconf3:arm64. 160s Preparing to unpack .../125-libpkgconf3_1.8.1-2_arm64.deb ... 160s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 160s Selecting previously unselected package libpng-dev:arm64. 160s Preparing to unpack .../126-libpng-dev_1.6.43-3_arm64.deb ... 160s Unpacking libpng-dev:arm64 (1.6.43-3) ... 160s Selecting previously unselected package libpotrace0:arm64. 161s Preparing to unpack .../127-libpotrace0_1.16-2_arm64.deb ... 161s Unpacking libpotrace0:arm64 (1.16-2) ... 161s Selecting previously unselected package libptexenc1:arm64. 161s Preparing to unpack .../128-libptexenc1_2023.20230311.66589-9_arm64.deb ... 161s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 161s Selecting previously unselected package libreadline-dev:arm64. 161s Preparing to unpack .../129-libreadline-dev_8.2-3.1_arm64.deb ... 161s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 161s Selecting previously unselected package libsharpyuv0:arm64. 161s Preparing to unpack .../130-libsharpyuv0_1.3.2-0.4_arm64.deb ... 161s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 161s Selecting previously unselected package libsm6:arm64. 161s Preparing to unpack .../131-libsm6_2%3a1.2.3-1build2_arm64.deb ... 161s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 162s Selecting previously unselected package libsynctex2:arm64. 162s Preparing to unpack .../132-libsynctex2_2023.20230311.66589-9_arm64.deb ... 162s Unpacking libsynctex2:arm64 (2023.20230311.66589-9) ... 162s Selecting previously unselected package libtcl8.6:arm64. 162s Preparing to unpack .../133-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 162s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 162s Selecting previously unselected package libteckit0:arm64. 162s Preparing to unpack .../134-libteckit0_2.5.12+ds1-1_arm64.deb ... 162s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 162s Selecting previously unselected package libtexlua53-5:arm64. 163s Preparing to unpack .../135-libtexlua53-5_2023.20230311.66589-9_arm64.deb ... 163s Unpacking libtexlua53-5:arm64 (2023.20230311.66589-9) ... 163s Selecting previously unselected package libjbig0:arm64. 163s Preparing to unpack .../136-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 163s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 163s Selecting previously unselected package libwebp7:arm64. 163s Preparing to unpack .../137-libwebp7_1.3.2-0.4_arm64.deb ... 163s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 163s Selecting previously unselected package libtiff6:arm64. 164s Preparing to unpack .../138-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 164s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 164s Selecting previously unselected package libxft2:arm64. 164s Preparing to unpack .../139-libxft2_2.3.6-1_arm64.deb ... 164s Unpacking libxft2:arm64 (2.3.6-1) ... 164s Selecting previously unselected package libxss1:arm64. 164s Preparing to unpack .../140-libxss1_1%3a1.2.3-1build2_arm64.deb ... 164s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 164s Selecting previously unselected package libtk8.6:arm64. 164s Preparing to unpack .../141-libtk8.6_8.6.13-2_arm64.deb ... 164s Unpacking libtk8.6:arm64 (8.6.13-2) ... 164s Selecting previously unselected package libxt6t64:arm64. 165s Preparing to unpack .../142-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 165s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 165s Selecting previously unselected package libxmu6:arm64. 165s Preparing to unpack .../143-libxmu6_2%3a1.1.3-3_arm64.deb ... 165s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 165s Selecting previously unselected package libxpm4:arm64. 165s Preparing to unpack .../144-libxpm4_1%3a3.5.17-1_arm64.deb ... 165s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 165s Selecting previously unselected package libxaw7:arm64. 165s Preparing to unpack .../145-libxaw7_2%3a1.0.14-1_arm64.deb ... 165s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 165s Selecting previously unselected package libxi6:arm64. 165s Preparing to unpack .../146-libxi6_2%3a1.8.1-1_arm64.deb ... 165s Unpacking libxi6:arm64 (2:1.8.1-1) ... 165s Selecting previously unselected package libzzip-0-13:arm64. 165s Preparing to unpack .../147-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 165s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 165s Selecting previously unselected package zip. 165s Preparing to unpack .../148-zip_3.0-13_arm64.deb ... 165s Unpacking zip (3.0-13) ... 165s Selecting previously unselected package unzip. 165s Preparing to unpack .../149-unzip_6.0-28ubuntu3_arm64.deb ... 165s Unpacking unzip (6.0-28ubuntu3) ... 165s Selecting previously unselected package xdg-utils. 165s Preparing to unpack .../150-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 165s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 165s Selecting previously unselected package r-base-core. 166s Preparing to unpack .../151-r-base-core_4.3.3-2build1_arm64.deb ... 166s Unpacking r-base-core (4.3.3-2build1) ... 166s Selecting previously unselected package r-cran-littler. 166s Preparing to unpack .../152-r-cran-littler_0.3.19-1_arm64.deb ... 166s Unpacking r-cran-littler (0.3.19-1) ... 166s Selecting previously unselected package littler. 166s Preparing to unpack .../153-littler_0.3.19-1_all.deb ... 166s Unpacking littler (0.3.19-1) ... 166s Selecting previously unselected package node-bootstrap-sass. 166s Preparing to unpack .../154-node-bootstrap-sass_3.4.3-2_all.deb ... 166s Unpacking node-bootstrap-sass (3.4.3-2) ... 166s Selecting previously unselected package node-html5shiv. 166s Preparing to unpack .../155-node-html5shiv_3.7.3+dfsg-5_all.deb ... 166s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 166s Selecting previously unselected package node-normalize.css. 166s Preparing to unpack .../156-node-normalize.css_8.0.1-5_all.deb ... 166s Unpacking node-normalize.css (8.0.1-5) ... 166s Selecting previously unselected package pandoc-data. 166s Preparing to unpack .../157-pandoc-data_3.1.3-1_all.deb ... 166s Unpacking pandoc-data (3.1.3-1) ... 166s Selecting previously unselected package pandoc. 166s Preparing to unpack .../158-pandoc_3.1.3+ds-2_arm64.deb ... 166s Unpacking pandoc (3.1.3+ds-2) ... 167s Selecting previously unselected package pkgconf-bin. 167s Preparing to unpack .../159-pkgconf-bin_1.8.1-2_arm64.deb ... 167s Unpacking pkgconf-bin (1.8.1-2) ... 167s Selecting previously unselected package pkgconf:arm64. 167s Preparing to unpack .../160-pkgconf_1.8.1-2_arm64.deb ... 167s Unpacking pkgconf:arm64 (1.8.1-2) ... 167s Selecting previously unselected package pkg-config:arm64. 167s Preparing to unpack .../161-pkg-config_1.8.1-2_arm64.deb ... 167s Unpacking pkg-config:arm64 (1.8.1-2) ... 167s Selecting previously unselected package liblzma-dev:arm64. 167s Preparing to unpack .../162-liblzma-dev_5.4.5-0.3_arm64.deb ... 167s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 167s Selecting previously unselected package r-base-dev. 167s Preparing to unpack .../163-r-base-dev_4.3.3-2build1_all.deb ... 167s Unpacking r-base-dev (4.3.3-2build1) ... 167s Selecting previously unselected package pkg-r-autopkgtest. 168s Preparing to unpack .../164-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 168s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 168s Selecting previously unselected package r-bioc-biocgenerics. 168s Preparing to unpack .../165-r-bioc-biocgenerics_0.48.1-2_all.deb ... 168s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 168s Selecting previously unselected package r-bioc-biobase. 168s Preparing to unpack .../166-r-bioc-biobase_2.62.0-1_arm64.deb ... 168s Unpacking r-bioc-biobase (2.62.0-1) ... 168s Selecting previously unselected package r-bioc-s4vectors. 168s Preparing to unpack .../167-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 168s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 168s Selecting previously unselected package r-bioc-iranges. 168s Preparing to unpack .../168-r-bioc-iranges_2.36.0-1_arm64.deb ... 168s Unpacking r-bioc-iranges (2.36.0-1) ... 168s Selecting previously unselected package r-cran-dbi. 168s Preparing to unpack .../169-r-cran-dbi_1.2.2-1_all.deb ... 168s Unpacking r-cran-dbi (1.2.2-1) ... 168s Selecting previously unselected package r-cran-bit. 168s Preparing to unpack .../170-r-cran-bit_4.0.5-1_arm64.deb ... 168s Unpacking r-cran-bit (4.0.5-1) ... 168s Selecting previously unselected package r-cran-bit64. 168s Preparing to unpack .../171-r-cran-bit64_4.0.5-1_arm64.deb ... 168s Unpacking r-cran-bit64 (4.0.5-1) ... 168s Selecting previously unselected package r-cran-rlang. 168s Preparing to unpack .../172-r-cran-rlang_1.1.3-1_arm64.deb ... 168s Unpacking r-cran-rlang (1.1.3-1) ... 168s Selecting previously unselected package r-cran-cli. 169s Preparing to unpack .../173-r-cran-cli_3.6.2-1_arm64.deb ... 169s Unpacking r-cran-cli (3.6.2-1) ... 169s Selecting previously unselected package r-cran-glue. 169s Preparing to unpack .../174-r-cran-glue_1.7.0-1_arm64.deb ... 169s Unpacking r-cran-glue (1.7.0-1) ... 169s Selecting previously unselected package r-cran-lifecycle. 169s Preparing to unpack .../175-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 169s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 169s Selecting previously unselected package r-cran-vctrs. 169s Preparing to unpack .../176-r-cran-vctrs_0.6.5-1_arm64.deb ... 169s Unpacking r-cran-vctrs (0.6.5-1) ... 169s Selecting previously unselected package r-cran-blob. 169s Preparing to unpack .../177-r-cran-blob_1.2.4-1_all.deb ... 169s Unpacking r-cran-blob (1.2.4-1) ... 169s Selecting previously unselected package r-cran-fastmap. 169s Preparing to unpack .../178-r-cran-fastmap_1.1.1-1_arm64.deb ... 169s Unpacking r-cran-fastmap (1.1.1-1) ... 169s Selecting previously unselected package r-cran-cachem. 169s Preparing to unpack .../179-r-cran-cachem_1.0.8-1_arm64.deb ... 169s Unpacking r-cran-cachem (1.0.8-1) ... 169s Selecting previously unselected package r-cran-memoise. 169s Preparing to unpack .../180-r-cran-memoise_2.0.1-1_all.deb ... 169s Unpacking r-cran-memoise (2.0.1-1) ... 169s Selecting previously unselected package r-cran-pkgconfig. 169s Preparing to unpack .../181-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 169s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 169s Selecting previously unselected package r-cran-plogr. 169s Preparing to unpack .../182-r-cran-plogr_0.2.0-3build1_all.deb ... 169s Unpacking r-cran-plogr (0.2.0-3build1) ... 169s Selecting previously unselected package r-cran-cpp11. 169s Preparing to unpack .../183-r-cran-cpp11_0.4.7-1_all.deb ... 169s Unpacking r-cran-cpp11 (0.4.7-1) ... 169s Selecting previously unselected package r-cran-rsqlite. 170s Preparing to unpack .../184-r-cran-rsqlite_2.3.4-1_arm64.deb ... 170s Unpacking r-cran-rsqlite (2.3.4-1) ... 170s Selecting previously unselected package r-cran-curl. 170s Preparing to unpack .../185-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 170s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 170s Selecting previously unselected package r-cran-jsonlite. 170s Preparing to unpack .../186-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 170s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 170s Selecting previously unselected package r-cran-mime. 170s Preparing to unpack .../187-r-cran-mime_0.12-1_arm64.deb ... 170s Unpacking r-cran-mime (0.12-1) ... 170s Selecting previously unselected package r-cran-sys. 170s Preparing to unpack .../188-r-cran-sys_3.4.2-1_arm64.deb ... 170s Unpacking r-cran-sys (3.4.2-1) ... 170s Selecting previously unselected package r-cran-askpass. 170s Preparing to unpack .../189-r-cran-askpass_1.2.0-1_arm64.deb ... 170s Unpacking r-cran-askpass (1.2.0-1) ... 170s Selecting previously unselected package r-cran-openssl. 170s Preparing to unpack .../190-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 170s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 170s Selecting previously unselected package r-cran-r6. 170s Preparing to unpack .../191-r-cran-r6_2.5.1-1_all.deb ... 170s Unpacking r-cran-r6 (2.5.1-1) ... 170s Selecting previously unselected package r-cran-httr. 170s Preparing to unpack .../192-r-cran-httr_1.4.7+dfsg-1_all.deb ... 170s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 170s Selecting previously unselected package r-cran-png. 170s Preparing to unpack .../193-r-cran-png_0.1-8-1_arm64.deb ... 170s Unpacking r-cran-png (0.1-8-1) ... 170s Selecting previously unselected package r-bioc-zlibbioc. 170s Preparing to unpack .../194-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 170s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 170s Selecting previously unselected package r-bioc-xvector. 170s Preparing to unpack .../195-r-bioc-xvector_0.42.0-1_arm64.deb ... 170s Unpacking r-bioc-xvector (0.42.0-1) ... 170s Selecting previously unselected package r-cran-bitops. 170s Preparing to unpack .../196-r-cran-bitops_1.0-7-1_arm64.deb ... 170s Unpacking r-cran-bitops (1.0-7-1) ... 170s Selecting previously unselected package r-cran-rcurl. 170s Preparing to unpack .../197-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 170s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 170s Selecting previously unselected package r-bioc-genomeinfodbdata. 170s Preparing to unpack .../198-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 170s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 170s Selecting previously unselected package r-bioc-genomeinfodb. 171s Preparing to unpack .../199-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 171s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 171s Selecting previously unselected package r-cran-crayon. 171s Preparing to unpack .../200-r-cran-crayon_1.5.2-1_all.deb ... 171s Unpacking r-cran-crayon (1.5.2-1) ... 171s Selecting previously unselected package r-bioc-biostrings. 171s Preparing to unpack .../201-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 171s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 171s Selecting previously unselected package r-bioc-keggrest. 171s Preparing to unpack .../202-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 171s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 171s Selecting previously unselected package r-bioc-annotationdbi. 172s Preparing to unpack .../203-r-bioc-annotationdbi_1.64.1-1_all.deb ... 172s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 172s Selecting previously unselected package r-cran-xml. 172s Preparing to unpack .../204-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 172s Unpacking r-cran-xml (3.99-0.16.1-1) ... 172s Selecting previously unselected package r-cran-xtable. 172s Preparing to unpack .../205-r-cran-xtable_1%3a1.8-4-2_all.deb ... 172s Unpacking r-cran-xtable (1:1.8-4-2) ... 172s Selecting previously unselected package r-bioc-annotate. 172s Preparing to unpack .../206-r-bioc-annotate_1.80.0+dfsg-1_all.deb ... 172s Unpacking r-bioc-annotate (1.80.0+dfsg-1) ... 172s Selecting previously unselected package r-cran-formatr. 172s Preparing to unpack .../207-r-cran-formatr_1.14-1_all.deb ... 172s Unpacking r-cran-formatr (1.14-1) ... 172s Selecting previously unselected package r-cran-lambda.r. 172s Preparing to unpack .../208-r-cran-lambda.r_1.2.4-2build1_all.deb ... 172s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 172s Selecting previously unselected package r-cran-futile.options. 172s Preparing to unpack .../209-r-cran-futile.options_1.0.1-3build1_all.deb ... 172s Unpacking r-cran-futile.options (1.0.1-3build1) ... 172s Selecting previously unselected package r-cran-futile.logger. 172s Preparing to unpack .../210-r-cran-futile.logger_1.4.3-4build1_all.deb ... 172s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 172s Selecting previously unselected package r-cran-snow. 172s Preparing to unpack .../211-r-cran-snow_1%3a0.4.4-2_all.deb ... 172s Unpacking r-cran-snow (1:0.4.4-2) ... 172s Selecting previously unselected package r-cran-codetools. 172s Preparing to unpack .../212-r-cran-codetools_0.2-19-1_all.deb ... 172s Unpacking r-cran-codetools (0.2-19-1) ... 172s Selecting previously unselected package r-cran-bh. 172s Preparing to unpack .../213-r-cran-bh_1.84.0-1_all.deb ... 172s Unpacking r-cran-bh (1.84.0-1) ... 172s Selecting previously unselected package r-bioc-biocparallel. 172s Preparing to unpack .../214-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 172s Unpacking r-bioc-biocparallel (1.36.0-1) ... 172s Selecting previously unselected package r-cran-base64enc. 172s Preparing to unpack .../215-r-cran-base64enc_0.1-3-3_arm64.deb ... 172s Unpacking r-cran-base64enc (0.1-3-3) ... 172s Selecting previously unselected package r-cran-digest. 172s Preparing to unpack .../216-r-cran-digest_0.6.34-1_arm64.deb ... 173s Unpacking r-cran-digest (0.6.34-1) ... 173s Selecting previously unselected package r-cran-ellipsis. 173s Preparing to unpack .../217-r-cran-ellipsis_0.3.2-2_arm64.deb ... 173s Unpacking r-cran-ellipsis (0.3.2-2) ... 173s Selecting previously unselected package r-cran-htmltools. 173s Preparing to unpack .../218-r-cran-htmltools_0.5.7-1_arm64.deb ... 173s Unpacking r-cran-htmltools (0.5.7-1) ... 173s Selecting previously unselected package r-cran-evaluate. 173s Preparing to unpack .../219-r-cran-evaluate_0.23-1_all.deb ... 173s Unpacking r-cran-evaluate (0.23-1) ... 173s Selecting previously unselected package r-cran-xfun. 173s Preparing to unpack .../220-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 173s Unpacking r-cran-xfun (0.41+dfsg-1) ... 173s Selecting previously unselected package r-cran-highr. 173s Preparing to unpack .../221-r-cran-highr_0.10+dfsg-1_all.deb ... 173s Unpacking r-cran-highr (0.10+dfsg-1) ... 173s Selecting previously unselected package r-cran-yaml. 173s Preparing to unpack .../222-r-cran-yaml_2.3.8-1_arm64.deb ... 173s Unpacking r-cran-yaml (2.3.8-1) ... 173s Selecting previously unselected package libjs-mathjax. 173s Preparing to unpack .../223-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 173s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 173s Selecting previously unselected package r-cran-knitr. 174s Preparing to unpack .../224-r-cran-knitr_1.45+dfsg-1_all.deb ... 174s Unpacking r-cran-knitr (1.45+dfsg-1) ... 174s Selecting previously unselected package r-cran-jquerylib. 174s Preparing to unpack .../225-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 174s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 174s Selecting previously unselected package r-cran-fs. 174s Preparing to unpack .../226-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 174s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 174s Selecting previously unselected package r-cran-rappdirs. 175s Preparing to unpack .../227-r-cran-rappdirs_0.3.3-1_arm64.deb ... 175s Unpacking r-cran-rappdirs (0.3.3-1) ... 175s Selecting previously unselected package r-cran-sass. 175s Preparing to unpack .../228-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 175s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 175s Selecting previously unselected package r-cran-bslib. 175s Preparing to unpack .../229-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 175s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 175s Selecting previously unselected package r-cran-fontawesome. 175s Preparing to unpack .../230-r-cran-fontawesome_0.5.2-1_all.deb ... 175s Unpacking r-cran-fontawesome (0.5.2-1) ... 175s Selecting previously unselected package r-cran-magrittr. 175s Preparing to unpack .../231-r-cran-magrittr_2.0.3-1_arm64.deb ... 175s Unpacking r-cran-magrittr (2.0.3-1) ... 175s Selecting previously unselected package r-cran-stringi. 175s Preparing to unpack .../232-r-cran-stringi_1.8.3-1_arm64.deb ... 175s Unpacking r-cran-stringi (1.8.3-1) ... 175s Selecting previously unselected package r-cran-stringr. 175s Preparing to unpack .../233-r-cran-stringr_1.5.1-1_all.deb ... 175s Unpacking r-cran-stringr (1.5.1-1) ... 175s Selecting previously unselected package r-cran-tinytex. 175s Preparing to unpack .../234-r-cran-tinytex_0.49-1_all.deb ... 175s Unpacking r-cran-tinytex (0.49-1) ... 175s Selecting previously unselected package libjs-modernizr. 175s Preparing to unpack .../235-libjs-modernizr_2.6.2+ds1-5_all.deb ... 175s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 175s Selecting previously unselected package r-cran-pkgkitten. 176s Preparing to unpack .../236-r-cran-pkgkitten_0.2.3-1_all.deb ... 176s Unpacking r-cran-pkgkitten (0.2.3-1) ... 176s Selecting previously unselected package r-cran-rcpp. 176s Preparing to unpack .../237-r-cran-rcpp_1.0.12-1_arm64.deb ... 176s Unpacking r-cran-rcpp (1.0.12-1) ... 176s Selecting previously unselected package r-cran-later. 176s Preparing to unpack .../238-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 176s Unpacking r-cran-later (1.3.2+dfsg-1) ... 176s Selecting previously unselected package r-cran-promises. 177s Preparing to unpack .../239-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 177s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 177s Selecting previously unselected package r-cran-httpuv. 177s Preparing to unpack .../240-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 177s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 177s Selecting previously unselected package r-cran-sourcetools. 177s Preparing to unpack .../241-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 177s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 177s Selecting previously unselected package r-cran-withr. 177s Preparing to unpack .../242-r-cran-withr_2.5.0-1_all.deb ... 177s Unpacking r-cran-withr (2.5.0-1) ... 177s Selecting previously unselected package r-cran-commonmark. 177s Preparing to unpack .../243-r-cran-commonmark_1.9.1-1_arm64.deb ... 177s Unpacking r-cran-commonmark (1.9.1-1) ... 177s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 177s Preparing to unpack .../244-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 177s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 177s Selecting previously unselected package r-cran-shiny. 177s Preparing to unpack .../245-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 177s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 177s Selecting previously unselected package r-cran-rmarkdown. 177s Preparing to unpack .../246-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 177s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 177s Selecting previously unselected package r-cran-bookdown. 178s Preparing to unpack .../247-r-cran-bookdown_0.37+dfsg-1_all.deb ... 178s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 178s Selecting previously unselected package r-cran-biocmanager. 178s Preparing to unpack .../248-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 178s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 178s Selecting previously unselected package tex-common. 178s Preparing to unpack .../249-tex-common_6.18_all.deb ... 178s Unpacking tex-common (6.18) ... 178s Selecting previously unselected package t1utils. 178s Preparing to unpack .../250-t1utils_1.41-4build2_arm64.deb ... 178s Unpacking t1utils (1.41-4build2) ... 178s Selecting previously unselected package texlive-binaries. 179s Preparing to unpack .../251-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 179s Unpacking texlive-binaries (2023.20230311.66589-9) ... 179s Selecting previously unselected package texlive-base. 179s Preparing to unpack .../252-texlive-base_2023.20240207-1_all.deb ... 179s Unpacking texlive-base (2023.20240207-1) ... 180s Selecting previously unselected package texlive-latex-base. 180s Preparing to unpack .../253-texlive-latex-base_2023.20240207-1_all.deb ... 180s Unpacking texlive-latex-base (2023.20240207-1) ... 181s Selecting previously unselected package texlive-bibtex-extra. 181s Preparing to unpack .../254-texlive-bibtex-extra_2023.20240207-1_all.deb ... 181s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 184s Selecting previously unselected package r-bioc-biocstyle. 184s Preparing to unpack .../255-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 184s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 184s Selecting previously unselected package r-cran-lattice. 184s Preparing to unpack .../256-r-cran-lattice_0.22-5-1_arm64.deb ... 184s Unpacking r-cran-lattice (0.22-5-1) ... 184s Selecting previously unselected package r-cran-matrix. 184s Preparing to unpack .../257-r-cran-matrix_1.6-5-1_arm64.deb ... 184s Unpacking r-cran-matrix (1.6-5-1) ... 184s Selecting previously unselected package r-cran-matrixstats. 184s Preparing to unpack .../258-r-cran-matrixstats_1.2.0-1_arm64.deb ... 184s Unpacking r-cran-matrixstats (1.2.0-1) ... 184s Selecting previously unselected package r-bioc-matrixgenerics. 185s Preparing to unpack .../259-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 185s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 185s Selecting previously unselected package r-cran-abind. 185s Preparing to unpack .../260-r-cran-abind_1.4-5-2_all.deb ... 185s Unpacking r-cran-abind (1.4-5-2) ... 185s Selecting previously unselected package r-bioc-s4arrays. 185s Preparing to unpack .../261-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 185s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 185s Selecting previously unselected package r-bioc-sparsearray. 185s Preparing to unpack .../262-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 185s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 185s Selecting previously unselected package r-bioc-delayedarray. 185s Preparing to unpack .../263-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 185s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 185s Selecting previously unselected package r-bioc-sparsematrixstats. 185s Preparing to unpack .../264-r-bioc-sparsematrixstats_1.14.0+dfsg-1_arm64.deb ... 185s Unpacking r-bioc-sparsematrixstats (1.14.0+dfsg-1) ... 185s Selecting previously unselected package r-bioc-delayedmatrixstats. 186s Preparing to unpack .../265-r-bioc-delayedmatrixstats_1.24.0+ds-1_all.deb ... 186s Unpacking r-bioc-delayedmatrixstats (1.24.0+ds-1) ... 186s Selecting previously unselected package r-cran-survival. 186s Preparing to unpack .../266-r-cran-survival_3.5-8-1_arm64.deb ... 186s Unpacking r-cran-survival (3.5-8-1) ... 186s Selecting previously unselected package r-bioc-genefilter. 186s Preparing to unpack .../267-r-bioc-genefilter_1.84.0-1_arm64.deb ... 186s Unpacking r-bioc-genefilter (1.84.0-1) ... 186s Selecting previously unselected package r-bioc-genomicranges. 191s Preparing to unpack .../268-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 191s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 198s Selecting previously unselected package r-bioc-rhdf5lib. 201s Preparing to unpack .../269-r-bioc-rhdf5lib_1.24.2+dfsg-1_arm64.deb ... 201s Unpacking r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 201s Selecting previously unselected package r-bioc-rhdf5filters. 202s Preparing to unpack .../270-r-bioc-rhdf5filters_1.14.1+dfsg-3_arm64.deb ... 202s Unpacking r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 202s Selecting previously unselected package r-bioc-rhdf5. 203s Preparing to unpack .../271-r-bioc-rhdf5_2.46.1+dfsg-1_arm64.deb ... 203s Unpacking r-bioc-rhdf5 (2.46.1+dfsg-1) ... 203s Selecting previously unselected package r-bioc-hdf5array. 203s Preparing to unpack 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autopkgtest-satdep (0) ... 203s Setting up libjs-json (0~20221030+~1.0.8-1) ... 203s Setting up javascript-common (11+nmu1) ... 204s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 204s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 204s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 204s Setting up libpaper1:arm64 (1.1.29) ... 204s 204s Creating config file /etc/papersize with new version 204s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 204s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 204s Setting up libxpm4:arm64 (1:3.5.17-1) ... 204s Setting up hdf5-helpers (1.10.10+repack-3ubuntu1) ... 205s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 205s Setting up libxi6:arm64 (2:1.8.1-1) ... 205s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 205s Setting up libdatrie1:arm64 (0.2.13-3) ... 205s Setting up libjs-popper.js (1.16.1+ds-6) ... 205s Setting up libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 205s Setting up libxcb-render0:arm64 (1.15-1) ... 205s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 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205s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 205s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 205s Setting up libblas-dev:arm64 (3.12.0-3) ... 205s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 205s Setting up libsz2:arm64 (1.1.2-1) ... 205s Setting up dctrl-tools (2.24-3build2) ... 205s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 205s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 205s Setting up libsynctex2:arm64 (2023.20230311.66589-9) ... 205s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 205s Setting up libpotrace0:arm64 (1.16-2) ... 205s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 205s Setting up libice6:arm64 (2:1.0.10-1build2) ... 205s Setting up liblapack3:arm64 (3.12.0-3) ... 205s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 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/usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 206s Setting up pkg-config:arm64 (1.8.1-2) ... 206s Setting up libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 206s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 206s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 206s Setting up libhdf5-cpp-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 206s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 206s Setting up curl (8.5.0-2ubuntu7) ... 206s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 206s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 206s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 206s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 206s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 206s Setting up libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 206s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 206s Setting up fontconfig (2.15.0-1ubuntu1) ... 208s Regenerating fonts cache... done. 208s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 208s Setting up libxft2:arm64 (2.3.6-1) ... 208s Setting up libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 208s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 208s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 208s Setting up cpp-13 (13.2.0-17ubuntu2) ... 208s Setting up libtk8.6:arm64 (8.6.13-2) ... 208s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 208s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 208s Setting up libreadline-dev:arm64 (8.2-3.1) ... 208s Setting up libcairo2:arm64 (1.18.0-1) ... 208s Setting up libhdf5-hl-cpp-100:arm64 (1.10.10+repack-3ubuntu1) ... 208s Setting up libxt6t64:arm64 (1:1.2.1-1.2) ... 208s Setting up gcc-13 (13.2.0-17ubuntu2) ... 208s Setting up libhdf5-fortran-102:arm64 (1.10.10+repack-3ubuntu1) ... 208s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 208s Setting up cpp (4:13.2.0-7ubuntu1) ... 208s Setting up libhdf5-hl-fortran-100:arm64 (1.10.10+repack-3ubuntu1) ... 208s Setting up libboost-dev:arm64 (1.83.0.1ubuntu2) ... 208s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 208s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 208s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 208s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 208s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 208s Setting up g++-13 (13.2.0-17ubuntu2) ... 208s Setting up libxmu6:arm64 (2:1.1.3-3) ... 208s Setting up libpng-dev:arm64 (1.6.43-3) ... 208s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 208s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 208s Setting up libxaw7:arm64 (2:1.0.14-1) ... 208s Setting up gcc (4:13.2.0-7ubuntu1) ... 208s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 208s Setting up r-base-core (4.3.3-2build1) ... 208s 208s Creating config file /etc/R/Renviron with new version 208s Setting up r-cran-crayon (1.5.2-1) ... 208s Setting up libhdf5-dev (1.10.10+repack-3ubuntu1) ... 208s update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 208s Setting up r-cran-sourcetools (0.1.7-1-1) ... 208s Setting up r-cran-futile.options (1.0.1-3build1) ... 208s Setting up r-cran-lattice (0.22-5-1) ... 208s Setting up r-cran-formatr (1.14-1) ... 208s Setting up r-cran-xml (3.99-0.16.1-1) ... 208s Setting up texlive-binaries (2023.20230311.66589-9) ... 208s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 208s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 208s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 208s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 208s Setting up r-cran-commonmark (1.9.1-1) ... 208s Setting up r-cran-r6 (2.5.1-1) ... 208s Setting up r-cran-pkgkitten (0.2.3-1) ... 208s Setting up texlive-base (2023.20240207-1) ... 209s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 209s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 210s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 210s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 210s Setting up r-cran-magrittr (2.0.3-1) ... 210s Setting up r-cran-rappdirs (0.3.3-1) ... 210s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 210s Setting up r-cran-littler (0.3.19-1) ... 210s Setting up r-cran-bh (1.84.0-1) ... 210s Setting up r-cran-fs (1.6.3+dfsg-1) ... 210s Setting up r-cran-rcpp (1.0.12-1) ... 210s Setting up r-cran-curl (5.2.0+dfsg-1) ... 210s Setting up r-cran-codetools (0.2-19-1) ... 210s Setting up r-bioc-biocgenerics (0.48.1-2) ... 210s Setting up r-cran-rlang (1.1.3-1) ... 210s Setting up r-cran-matrixstats (1.2.0-1) ... 210s Setting up littler (0.3.19-1) ... 210s Setting up r-bioc-matrixgenerics (1.14.0-1) ... 210s Setting up r-cran-xfun (0.41+dfsg-1) ... 210s Setting up r-cran-sys (3.4.2-1) ... 210s Setting up r-cran-plogr (0.2.0-3build1) ... 210s Setting up r-cran-withr (2.5.0-1) ... 210s Setting up r-cran-mime (0.12-1) ... 210s Setting up r-cran-base64enc (0.1-3-3) ... 210s Setting up r-cran-abind (1.4-5-2) ... 210s Setting up r-cran-digest (0.6.34-1) ... 210s Setting up r-cran-yaml (2.3.8-1) ... 210s Setting up r-cran-lambda.r (1.2.4-2build1) ... 210s Setting up r-cran-evaluate (0.23-1) ... 210s Setting up r-cran-dbi (1.2.2-1) ... 210s Setting up r-cran-highr (0.10+dfsg-1) ... 210s Setting up r-cran-prettyunits (1.2.0-1) ... 210s Setting up r-bioc-rhdf5lib (1.24.2+dfsg-1) ... 210s Setting up r-cran-snow (1:0.4.4-2) ... 210s Setting up r-cran-glue (1.7.0-1) ... 210s Setting up r-bioc-rhdf5filters (1.14.1+dfsg-3) ... 210s Setting up r-cran-bit (4.0.5-1) ... 210s Setting up r-cran-xtable (1:1.8-4-2) ... 210s Setting up r-cran-cli (3.6.2-1) ... 210s Setting up gfortran (4:13.2.0-7ubuntu1) ... 210s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 210s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 210s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 210s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 210s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 210s Setting up r-cran-bitops (1.0-7-1) ... 210s Setting up r-cran-bit64 (4.0.5-1) ... 210s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 210s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 210s Setting up r-cran-askpass (1.2.0-1) ... 210s Setting up r-cran-fastmap (1.1.1-1) ... 210s Setting up r-cran-png (0.1-8-1) ... 210s Setting up r-bioc-biobase (2.62.0-1) ... 210s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 210s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 210s Setting up r-cran-stringi (1.8.3-1) ... 210s Setting up texlive-latex-base (2023.20240207-1) ... 210s Setting up r-cran-cpp11 (0.4.7-1) ... 210s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 210s Setting up r-cran-runit (0.4.32-3) ... 210s Setting up r-cran-futile.logger (1.4.3-4build1) ... 210s Setting up r-cran-later (1.3.2+dfsg-1) ... 210s Setting up r-cran-matrix (1.6-5-1) ... 210s Setting up r-cran-tinytex (0.49-1) ... 210s Setting up r-cran-knitr (1.45+dfsg-1) ... 210s Setting up g++ (4:13.2.0-7ubuntu1) ... 210s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 210s Setting up r-cran-lobstr (1.1.2-1) ... 210s Setting up r-cran-cachem (1.0.8-1) ... 210s Setting up build-essential (12.10ubuntu1) ... 210s Setting up r-bioc-iranges (2.36.0-1) ... 211s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 211s Setting up r-bioc-sparsematrixstats (1.14.0+dfsg-1) ... 211s Setting up r-cran-vctrs (0.6.5-1) ... 211s Setting up r-cran-ellipsis (0.3.2-2) ... 211s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 211s Setting up r-base-dev (4.3.3-2build1) ... 211s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 211s Setting up r-cran-stringr (1.5.1-1) ... 211s Setting up r-bioc-biocparallel (1.36.0-1) ... 211s Setting up r-bioc-rhdf5 (2.46.1+dfsg-1) ... 211s Setting up r-cran-survival (3.5-8-1) ... 211s Setting up texlive-bibtex-extra (2023.20240207-1) ... 211s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 211s Setting up r-cran-httr (1.4.7+dfsg-1) ... 211s Setting up r-cran-memoise (2.0.1-1) ... 211s Setting up r-cran-promises (1.2.1+dfsg-1) ... 211s Setting up r-cran-blob (1.2.4-1) ... 211s Setting up r-cran-htmltools (0.5.7-1) ... 211s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 211s Setting up r-bioc-xvector (0.42.0-1) ... 211s Setting up r-cran-sass (0.4.8+dfsg-1) ... 211s Setting up r-cran-rsqlite (2.3.4-1) ... 211s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 211s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 211s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 211s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 211s Setting up r-cran-fontawesome (0.5.2-1) ... 211s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 211s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 211s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 211s Setting up r-bioc-hdf5array (1.30.1-1) ... 211s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 211s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 211s Setting up r-bioc-annotationdbi (1.64.1-1) ... 211s Setting up r-bioc-delayedmatrixstats (1.24.0+ds-1) ... 211s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 211s Setting up r-bioc-annotate (1.80.0+dfsg-1) ... 211s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 211s Setting up r-bioc-genefilter (1.84.0-1) ... 211s Setting up r-cran-bookdown (0.37+dfsg-1) ... 211s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 211s Setting up autopkgtest-satdep (0) ... 211s Processing triggers for man-db (2.12.0-3) ... 211s Processing triggers for install-info (7.1-3) ... 212s Processing triggers for libc-bin (2.39-0ubuntu2) ... 212s Processing triggers for tex-common (6.18) ... 212s Running updmap-sys. This may take some time... done. 212s Running mktexlsr /var/lib/texmf ... done. 213s Building format(s) --all. 256s This may take some time... done. 283s (Reading database ... 122483 files and directories currently installed.) 283s Removing autopkgtest-satdep (0) ... 284s autopkgtest [17:31:18]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 284s autopkgtest [17:31:18]: test pkg-r-autopkgtest: [----------------------- 284s Test: Try to load the R library DelayedArray 285s 285s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 285s Copyright (C) 2024 The R Foundation for Statistical Computing 285s Platform: aarch64-unknown-linux-gnu (64-bit) 285s 285s R is free software and comes with ABSOLUTELY NO WARRANTY. 285s You are welcome to redistribute it under certain conditions. 285s Type 'license()' or 'licence()' for distribution details. 285s 285s R is a collaborative project with many contributors. 285s Type 'contributors()' for more information and 285s 'citation()' on how to cite R or R packages in publications. 285s 285s Type 'demo()' for some demos, 'help()' for on-line help, or 285s 'help.start()' for an HTML browser interface to help. 285s Type 'q()' to quit R. 285s 286s > library('DelayedArray') 286s Loading required package: stats4 286s Loading required package: Matrix 287s Loading required package: BiocGenerics 287s 287s Attaching package: ‘BiocGenerics’ 287s 287s The following objects are masked from ‘package:stats’: 287s 287s IQR, mad, sd, var, xtabs 287s 287s The following objects are masked from ‘package:base’: 287s 287s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 287s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 287s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 287s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 287s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 287s table, tapply, union, unique, unsplit, which.max, which.min 287s 287s Loading required package: MatrixGenerics 287s Loading required package: matrixStats 287s 287s Attaching package: ‘MatrixGenerics’ 287s 287s The following objects are masked from ‘package:matrixStats’: 287s 287s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 287s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 287s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 287s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 287s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 287s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 287s colWeightedMeans, colWeightedMedians, colWeightedSds, 287s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 287s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 287s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 287s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 287s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 287s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 287s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 287s rowWeightedSds, rowWeightedVars 287s 287s Loading required package: S4Vectors 288s 288s Attaching package: ‘S4Vectors’ 288s 288s The following objects are masked from ‘package:Matrix’: 288s 288s expand, unname 288s 288s The following object is masked from ‘package:utils’: 288s 288s findMatches 288s 288s The following objects are masked from ‘package:base’: 288s 288s expand.grid, I, unname 288s 288s Loading required package: IRanges 289s Loading required package: S4Arrays 289s Loading required package: abind 289s 289s Attaching package: ‘S4Arrays’ 289s 289s The following object is masked from ‘package:abind’: 289s 289s abind 289s 289s The following object is masked from ‘package:base’: 289s 289s rowsum 289s 289s Loading required package: SparseArray 291s 291s Attaching package: ‘DelayedArray’ 291s 291s > 291s > 291s The following objects are masked from ‘package:base’: 291s 291s apply, scale, sweep 291s 291s Other tests are currently unsupported! 291s They will be progressively added. 291s autopkgtest [17:31:25]: test pkg-r-autopkgtest: -----------------------] 292s autopkgtest [17:31:26]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 292s pkg-r-autopkgtest PASS 293s autopkgtest [17:31:27]: @@@@@@@@@@@@@@@@@@@@ summary 293s pkg-r-autopkgtest PASS 311s Creating nova instance adt-noble-arm64-r-bioc-delayedarray-20240316-172633-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...