0s autopkgtest [13:39:52]: starting date and time: 2024-03-16 13:39:52+0000 0s autopkgtest [13:39:52]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [13:39:52]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.mxk4c1kg/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:r-bioc-rsamtools,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-degnorm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rsamtools/2.18.0+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-19.secgroup --name adt-noble-arm64-r-bioc-degnorm-20240316-133952-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 115s autopkgtest [13:41:47]: testbed dpkg architecture: arm64 115s autopkgtest [13:41:47]: testbed apt version: 2.7.12 115s autopkgtest [13:41:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup 116s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 117s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3690 kB] 117s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 117s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 117s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 117s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 117s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 117s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 117s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 117s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4006 kB] 117s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 117s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.8 kB] 117s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 120s Fetched 9092 kB in 3s (3283 kB/s) 121s Reading package lists... 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 126s Calculating upgrade... 126s The following packages will be REMOVED: 126s libssl3 126s The following NEW packages will be installed: 126s libssl3t64 126s The following packages have been kept back: 126s curl 126s The following packages will be upgraded: 126s openssl ubuntu-minimal ubuntu-standard 127s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 127s Need to get 2775 kB of archives. 127s After this operation, 72.7 kB of additional disk space will be used. 127s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 127s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 127s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 127s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 129s Fetched 2775 kB in 1s (3780 kB/s) 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 130s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 130s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 132s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 132s wget depends on libssl3 (>= 3.0.0). 132s u-boot-tools depends on libssl3 (>= 3.0.0). 132s tnftp depends on libssl3 (>= 3.0.0). 132s tcpdump depends on libssl3 (>= 3.0.0). 132s systemd-resolved depends on libssl3 (>= 3.0.0). 132s systemd depends on libssl3 (>= 3.0.0). 132s sudo depends on libssl3 (>= 3.0.0). 132s sbsigntool depends on libssl3 (>= 3.0.0). 132s rsync depends on libssl3 (>= 3.0.0). 132s python3-cryptography depends on libssl3 (>= 3.0.0). 132s openssh-server depends on libssl3 (>= 3.0.10). 132s openssh-client depends on libssl3 (>= 3.0.10). 132s mtd-utils depends on libssl3 (>= 3.0.0). 132s mokutil depends on libssl3 (>= 3.0.0). 132s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 132s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 132s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 132s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 132s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 132s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 132s libnvme1 depends on libssl3 (>= 3.0.0). 132s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 132s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 132s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 132s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 132s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 132s kmod depends on libssl3 (>= 3.0.0). 132s dhcpcd-base depends on libssl3 (>= 3.0.0). 132s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 132s 132s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 132s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 133s Selecting previously unselected package libssl3t64:arm64. 133s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 133s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 133s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 135s Preparing to unpack .../ubuntu-minimal_1.536_arm64.deb ... 135s Unpacking ubuntu-minimal (1.536) over (1.535) ... 135s Preparing to unpack .../ubuntu-standard_1.536_arm64.deb ... 135s Unpacking ubuntu-standard (1.536) over (1.535) ... 137s Setting up ubuntu-minimal (1.536) ... 137s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 137s Setting up ubuntu-standard (1.536) ... 137s Setting up openssl (3.0.13-0ubuntu1) ... 137s Processing triggers for man-db (2.12.0-3) ... 138s Processing triggers for libc-bin (2.39-0ubuntu2) ... 138s Reading package lists... 139s Building dependency tree... 139s Reading state information... 140s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 141s sh: Attempting to set up Debian/Ubuntu apt sources automatically 141s sh: Distribution appears to be Ubuntu 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 144s eatmydata is already the newest version (131-1). 144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 144s Reading package lists... 144s Building dependency tree... 144s Reading state information... 145s dbus is already the newest version (1.14.10-4ubuntu1). 145s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 145s Reading package lists... 146s Building dependency tree... 146s Reading state information... 146s rng-tools-debian is already the newest version (2.4). 146s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 147s Reading package lists... 147s Building dependency tree... 147s Reading state information... 148s The following packages will be REMOVED: 148s cloud-init* python3-configobj* python3-debconf* 149s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 149s After this operation, 3252 kB disk space will be freed. 149s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74760 files and directories currently installed.) 149s Removing cloud-init (24.1.1-0ubuntu1) ... 153s Removing python3-configobj (5.0.8-3) ... 153s Removing python3-debconf (1.5.86) ... 154s Processing triggers for man-db (2.12.0-3) ... 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74371 files and directories currently installed.) 154s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 156s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 156s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 156s invoke-rc.d: policy-rc.d denied execution of try-restart. 157s Reading package lists... 157s Building dependency tree... 157s Reading state information... 158s linux-generic is already the newest version (6.8.0-11.11+1). 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 158s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 158s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 158s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 162s Reading package lists... 163s Reading package lists... 163s Building dependency tree... 163s Reading state information... 163s Calculating upgrade... 164s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 164s Reading package lists... 164s Building dependency tree... 164s Reading state information... 165s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 165s autopkgtest [13:42:37]: rebooting testbed after setup commands that affected boot 354s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 361s autopkgtest [13:45:53]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 364s autopkgtest [13:45:56]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-degnorm 367s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-degnorm 1.12.0+ds-1 (dsc) [2379 B] 367s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-degnorm 1.12.0+ds-1 (tar) [1681 kB] 367s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-degnorm 1.12.0+ds-1 (diff) [2888 B] 367s gpgv: Signature made Fri Dec 1 15:17:51 2023 UTC 367s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 367s gpgv: issuer "tille@debian.org" 367s gpgv: Can't check signature: No public key 367s dpkg-source: warning: cannot verify inline signature for ./r-bioc-degnorm_1.12.0+ds-1.dsc: no acceptable signature found 367s autopkgtest [13:45:59]: testing package r-bioc-degnorm version 1.12.0+ds-1 367s autopkgtest [13:45:59]: build not needed 369s autopkgtest [13:46:01]: test pkg-r-autopkgtest: preparing testbed 370s Reading package lists... 370s Building dependency tree... 370s Reading state information... 370s Starting pkgProblemResolver with broken count: 0 370s Starting 2 pkgProblemResolver with broken count: 0 370s Done 371s The following additional packages will be installed: 371s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 371s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 371s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-13 371s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 371s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 371s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 371s javascript-common libasan8 libatomic1 libblas-dev libblas3 libboost-dev 371s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 371s libcrypt-dev libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 371s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 371s libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev 371s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 371s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 371s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 371s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 371s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 371s liblapack-dev liblapack3 liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 371s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 371s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 371s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 371s libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data 371s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 371s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev 371s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 371s pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 371s r-base-dev r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache 371s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biomart 371s r-bioc-biostrings r-bioc-degnorm r-bioc-delayedarray r-bioc-genomeinfodb 371s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 371s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 371s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 371s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 371s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-assertthat 371s r-cran-base64enc r-cran-bh r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 371s r-cran-bslib r-cran-ca r-cran-cachem r-cran-callr r-cran-cli r-cran-cluster 371s r-cran-codetools r-cran-colorspace r-cran-colourpicker r-cran-commonmark 371s r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-data.table 371s r-cran-dbi r-cran-dbplyr r-cran-dendextend r-cran-digest r-cran-doparallel 371s r-cran-dplyr r-cran-egg r-cran-ellipsis r-cran-evaluate r-cran-fansi 371s r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 371s r-cran-foreach r-cran-formatr r-cran-fs r-cran-futile.logger 371s r-cran-futile.options r-cran-gclus r-cran-generics r-cran-ggplot2 371s r-cran-glue r-cran-gridextra r-cran-gtable r-cran-heatmaply r-cran-highr 371s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 371s r-cran-isoband r-cran-iterators r-cran-jquerylib r-cran-jsonlite 371s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 371s r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 371s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime 371s r-cran-miniui r-cran-munsell r-cran-nlme r-cran-openssl r-cran-permute 371s r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-plotly 371s r-cran-plyr r-cran-png r-cran-prettyunits r-cran-processx r-cran-progress 371s r-cran-promises r-cran-ps r-cran-purrr r-cran-qap r-cran-r6 r-cran-rappdirs 371s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo r-cran-rcurl 371s r-cran-registry r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang 371s r-cran-rmarkdown r-cran-rsqlite r-cran-sass r-cran-scales r-cran-seriation 371s r-cran-shiny r-cran-shinyjs r-cran-snow r-cran-sourcetools r-cran-stringi 371s r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 371s r-cran-tinytex r-cran-tsp r-cran-utf8 r-cran-vctrs r-cran-vegan 371s r-cran-viridis r-cran-viridislite r-cran-webshot r-cran-withr r-cran-xfun 371s r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto unzip 371s x11-common xdg-utils zip zlib1g-dev 371s Suggested packages: 371s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 371s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 371s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 371s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 371s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 371s libboost-context1.83-dev libboost-contract1.83-dev 371s libboost-coroutine1.83-dev libboost-date-time1.83-dev 371s libboost-exception1.83-dev libboost-fiber1.83-dev 371s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 371s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 371s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 371s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 371s libboost-numpy1.83-dev libboost-program-options1.83-dev 371s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 371s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 371s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 371s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 371s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 371s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 371s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 371s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 371s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 371s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 371s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base 371s texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra 371s texlive-extra-utils texinfo r-bioc-go.db r-cran-runit r-bioc-org.hs.eg.db 371s r-bioc-graph r-bioc-biocstyle r-bioc-all r-cran-testthat r-bioc-affy 371s r-bioc-deseq2 r-bioc-annotate r-cran-bbmisc r-bioc-variantannotation 371s r-bioc-shortread r-cran-batchtools r-cran-mockery r-cran-webmockr 371s r-bioc-bsgenome r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr 371s r-bioc-delayedmatrixstats r-cran-r.utils r-bioc-edger r-bioc-ensembldb 371s r-bioc-annotationfilter r-cran-markdown r-bioc-gviz r-bioc-annotationhub 371s r-bioc-dexseq r-bioc-sparsematrixstats r-bioc-limma r-bioc-rhdf5 r-cran-covr 371s r-cran-roxygen2 r-cran-ff r-cran-rgl r-cran-vcd r-cran-rprojroot 371s r-cran-spelling r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-jpeg 371s r-cran-rstudioapi r-cran-rmysql r-cran-ape r-cran-gplots 371s r-cran-dynamictreecut r-cran-corrplot r-cran-fpc r-cran-circlize 371s r-cran-lubridate r-cran-magick r-cran-sf r-cran-getopt r-cran-bookdown 371s r-cran-sessioninfo r-cran-formattable r-cran-nanotime r-cran-palmerpenguins 371s r-cran-survival r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi 371s r-cran-rlecuyer r-cran-bench r-cran-brio r-cran-here r-cran-pkgbuild 371s r-cran-pkgload r-cran-maps r-cran-plm r-cran-zoo 371s Recommended packages: 371s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 371s r-recommended r-doc-html r-cran-testthat r-cran-thematic r-cran-cliapp 371s r-cran-mockery r-cran-covr r-cran-rprojroot r-cran-rstudioapi r-cran-whoami 371s r-cran-bench r-cran-brio r-cran-decor r-cran-desc r-cran-lobstr 371s r-cran-spelling r-cran-webutils r-cran-r.utils r-cran-xts r-cran-nanotime 371s r-cran-zoo r-cran-rpostgresql r-cran-pvclust r-cran-runit r-cran-caret 371s r-cran-mlbench r-cran-rpart r-cran-broom r-cran-rmysql r-cran-unitizer 371s r-cran-rsvg r-cran-testit r-cran-survival r-cran-pkgload r-cran-hexbin 371s r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis 371s r-cran-quantreg r-cran-ragg r-cran-sf r-cran-svglite r-cran-vdiffr 371s r-cran-waldo r-cran-gplots r-cran-cairo r-cran-markdown r-cran-jpeg 371s r-cran-readr r-cran-r.rsp r-cran-gridsvg r-cran-magick r-cran-reticulate 371s r-cran-rgl r-cran-tikzdevice node-highlight.js r-cran-lintr r-cran-tidyverse 371s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-ggthemes 371s r-cran-ggally r-cran-ggalluvial r-cran-irdisplay r-cran-forcats 371s r-cran-palmerpenguins r-cran-rversions r-cran-itertools r-cran-webfakes 371s r-cran-future r-cran-pingr r-cran-usethis r-cran-dygraphs r-cran-rsconnect 371s r-cran-downlit r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 371s r-cran-dichromat r-cran-dbscan r-cran-rtsne r-cran-mockr r-cran-formattable 371s r-cran-pkgdown r-cran-zeallot r-cran-remotes r-cran-renv 371s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 371s x11-xserver-utils 371s The following NEW packages will be installed: 371s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 371s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 371s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 371s fonts-glyphicons-halflings fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 371s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 371s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 371s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 371s libatomic1 libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev 371s libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 371s libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 371s libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 371s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 371s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 371s libjs-highlight.js libjs-jquery libjs-jquery-datatables 371s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 371s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 371s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 371s liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 371s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 371s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 371s libpixman-1-0 libpkgconf3 libpng-dev libreadline-dev libsharpyuv0 libsm6 371s libstdc++-13-dev libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev 371s libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 371s libxrender1 libxss1 libxt6 linux-libc-dev littler node-bootstrap-sass 371s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 371s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 371s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 371s r-bioc-biocio r-bioc-biocparallel r-bioc-biomart r-bioc-biostrings 371s r-bioc-degnorm r-bioc-delayedarray r-bioc-genomeinfodb 371s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 371s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 371s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 371s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 371s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-assertthat 371s r-cran-base64enc r-cran-bh r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 371s r-cran-bslib r-cran-ca r-cran-cachem r-cran-callr r-cran-cli r-cran-cluster 371s r-cran-codetools r-cran-colorspace r-cran-colourpicker r-cran-commonmark 371s r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-data.table 371s r-cran-dbi r-cran-dbplyr r-cran-dendextend r-cran-digest r-cran-doparallel 371s r-cran-dplyr r-cran-egg r-cran-ellipsis r-cran-evaluate r-cran-fansi 371s r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 371s r-cran-foreach r-cran-formatr r-cran-fs r-cran-futile.logger 371s r-cran-futile.options r-cran-gclus r-cran-generics r-cran-ggplot2 371s r-cran-glue r-cran-gridextra r-cran-gtable r-cran-heatmaply r-cran-highr 371s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 371s r-cran-isoband r-cran-iterators r-cran-jquerylib r-cran-jsonlite 371s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 371s r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 371s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime 371s r-cran-miniui r-cran-munsell r-cran-nlme r-cran-openssl r-cran-permute 371s r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-plotly 371s r-cran-plyr r-cran-png r-cran-prettyunits r-cran-processx r-cran-progress 371s r-cran-promises r-cran-ps r-cran-purrr r-cran-qap r-cran-r6 r-cran-rappdirs 371s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo r-cran-rcurl 371s r-cran-registry r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang 371s r-cran-rmarkdown r-cran-rsqlite r-cran-sass r-cran-scales r-cran-seriation 371s r-cran-shiny r-cran-shinyjs r-cran-snow r-cran-sourcetools r-cran-stringi 371s r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 371s r-cran-tinytex r-cran-tsp r-cran-utf8 r-cran-vctrs r-cran-vegan 371s r-cran-viridis r-cran-viridislite r-cran-webshot r-cran-withr r-cran-xfun 371s r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto unzip 371s x11-common xdg-utils zip zlib1g-dev 371s 0 upgraded, 297 newly installed, 0 to remove and 0 not upgraded. 371s Need to get 339 MB/339 MB of archives. 371s After this operation, 1147 MB of additional disk space will be used. 371s Get:1 /tmp/autopkgtest.h5ksh5/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [752 B] 372s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 372s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 372s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 372s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 372s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 372s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 372s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 372s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 372s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 372s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 373s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 373s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 373s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 373s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 373s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 373s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 373s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 373s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 373s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 373s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 373s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 373s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 375s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 375s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 375s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 375s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 375s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 375s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 375s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 375s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 375s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 375s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 375s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 375s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 375s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 375s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 375s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 375s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 375s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 375s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 375s Get:42 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 375s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 375s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 375s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 375s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 376s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 376s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 376s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 376s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 376s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 376s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 376s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 376s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 376s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 376s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 376s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 376s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 376s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 376s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 376s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 376s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 376s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 376s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 376s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 376s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 376s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 376s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 376s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 376s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 376s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 376s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 376s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 376s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 376s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 376s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 376s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 376s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 376s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 376s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 376s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 376s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 376s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 376s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 376s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 376s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 376s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 376s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 377s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 377s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 377s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 377s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 377s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 377s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 377s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 377s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 377s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 377s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 377s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 377s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 377s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 377s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 377s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 377s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 377s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 377s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB] 377s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB] 377s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 377s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 377s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 377s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 377s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 377s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 377s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 377s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 377s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 378s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 378s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 378s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 378s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 378s Get:121 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 378s Get:122 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 378s Get:123 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 378s Get:124 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 378s Get:125 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 378s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 378s Get:127 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 378s Get:128 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 379s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 379s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 379s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 379s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 379s Get:133 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B] 379s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 379s Get:135 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 379s Get:136 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 379s Get:137 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 379s Get:138 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 379s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 379s Get:140 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 379s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 379s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 379s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 379s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 379s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 379s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 379s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 379s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 379s Get:149 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 379s Get:150 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 379s Get:151 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 379s Get:152 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 379s Get:153 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 379s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 379s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 379s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 379s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 379s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 379s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 379s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 379s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 379s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 379s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 379s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 379s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 379s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 379s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 379s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 380s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 380s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 380s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 380s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 380s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 380s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 380s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 380s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 380s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 380s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 380s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 380s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 380s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 380s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 380s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 380s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 380s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 380s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 380s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 380s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 380s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 380s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 380s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 380s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 380s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 380s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 380s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 380s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 380s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 380s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 380s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 380s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 380s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 380s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 380s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 381s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 381s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml2 arm64 1.3.6-1 [321 kB] 381s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 381s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 381s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 381s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 381s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhtslib arm64 2.4.1+dfsg-1 [1357 kB] 381s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rsamtools arm64 2.18.0+dfsg-1 [3629 kB] 382s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 382s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 382s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 382s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 382s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 382s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 382s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 382s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 382s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 382s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicalignments arm64 1.38.2-1 [2133 kB] 382s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rjson arm64 0.2.21-1 [142 kB] 382s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 382s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 382s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rtracklayer arm64 1.62.0-1 [5104 kB] 382s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 382s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-iterators all 1.0.14-1 [336 kB] 382s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-foreach all 1.5.2-1 [124 kB] 382s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-doparallel all 1.0.17-1 [189 kB] 382s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 382s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 382s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mass arm64 7.3-60.0.1-1 [1119 kB] 382s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-nlme arm64 3.1.164-1 [2259 kB] 382s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 382s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-farver arm64 2.1.1-1 [1336 kB] 382s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 382s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-colorspace arm64 2.1-0+dfsg-1 [1540 kB] 382s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-munsell all 0.5.0-2build1 [208 kB] 382s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 382s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 382s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 382s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 382s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 382s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 382s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 382s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 382s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 382s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 382s Get:249 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 383s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 383s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 383s Get:252 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 383s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 383s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 383s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 383s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 383s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 383s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 383s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 383s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 383s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 383s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 383s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 383s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 383s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 383s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 383s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 383s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 383s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 383s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-data.table arm64 1.14.10+dfsg-1 [1844 kB] 383s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 383s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shinyjs all 2.1.0-1 [967 kB] 383s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 383s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 383s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 383s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 384s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dendextend all 1.17.1+dfsg-1 [959 kB] 384s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB] 384s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-reshape2 arm64 1.4.4-2build1 [110 kB] 384s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ca all 0.71.1-2build1 [243 kB] 384s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cluster arm64 2.1.6-1 [552 kB] 384s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-gclus all 1.3.2-2build1 [406 kB] 384s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-qap arm64 0.1-2-1 [364 kB] 384s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-registry all 0.5-1-2build1 [202 kB] 384s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tsp arm64 1.2-4-1 [627 kB] 384s Get:286 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-permute all 0.9-7-1 [228 kB] 384s Get:287 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vegan arm64 2.6-4+dfsg-1 [3088 kB] 384s Get:288 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-seriation arm64 1.5.4-1 [1302 kB] 384s Get:289 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 384s Get:290 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 384s Get:291 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 384s Get:292 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-webshot all 0.5.5-1 [185 kB] 384s Get:293 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-assertthat all 0.2.1-2build1 [56.5 kB] 384s Get:294 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-egg all 0.4.5-3build1 [786 kB] 384s Get:295 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-heatmaply all 1.5.0+dfsg-1 [278 kB] 384s Get:296 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpparmadillo arm64 0.12.8.0.0-1 [859 kB] 384s Get:297 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-degnorm arm64 1.12.0+ds-1 [1514 kB] 386s Preconfiguring packages ... 386s Fetched 339 MB in 13s (26.4 MB/s) 386s Selecting previously unselected package libc-dev-bin. 386s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74316 files and directories currently installed.) 386s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 386s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 386s Selecting previously unselected package linux-libc-dev:arm64. 386s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_arm64.deb ... 386s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 386s Selecting previously unselected package libcrypt-dev:arm64. 387s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 387s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 387s Selecting previously unselected package libtirpc-dev:arm64. 387s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 387s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 387s Selecting previously unselected package libnsl-dev:arm64. 387s Preparing to unpack .../004-libnsl-dev_1.3.0-3_arm64.deb ... 387s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 387s Selecting previously unselected package rpcsvc-proto. 387s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 387s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 387s Selecting previously unselected package libc6-dev:arm64. 387s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_arm64.deb ... 387s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 387s Selecting previously unselected package libisl23:arm64. 387s Preparing to unpack .../007-libisl23_0.26-3_arm64.deb ... 387s Unpacking libisl23:arm64 (0.26-3) ... 387s Selecting previously unselected package libmpc3:arm64. 387s Preparing to unpack .../008-libmpc3_1.3.1-1_arm64.deb ... 387s Unpacking libmpc3:arm64 (1.3.1-1) ... 387s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 387s Preparing to unpack .../009-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 387s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 387s Selecting previously unselected package cpp-13. 387s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 387s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 387s Selecting previously unselected package cpp-aarch64-linux-gnu. 387s Preparing to unpack .../011-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 387s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 387s Selecting previously unselected package cpp. 387s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 387s Unpacking cpp (4:13.2.0-7ubuntu1) ... 387s Selecting previously unselected package libcc1-0:arm64. 387s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 387s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 387s Selecting previously unselected package libgomp1:arm64. 388s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 388s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 388s Selecting previously unselected package libitm1:arm64. 388s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_arm64.deb ... 388s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 388s Selecting previously unselected package libatomic1:arm64. 388s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 388s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 388s Selecting previously unselected package libasan8:arm64. 388s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_arm64.deb ... 388s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 388s Selecting previously unselected package liblsan0:arm64. 388s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 388s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 388s Selecting previously unselected package libtsan2:arm64. 388s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 388s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 388s Selecting previously unselected package libubsan1:arm64. 388s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 388s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 388s Selecting previously unselected package libhwasan0:arm64. 388s Preparing to unpack .../021-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 388s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 388s Selecting previously unselected package libgcc-13-dev:arm64. 388s Preparing to unpack .../022-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 388s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 388s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 388s Preparing to unpack .../023-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 388s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 389s Selecting previously unselected package gcc-13. 389s Preparing to unpack .../024-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 389s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 389s Selecting previously unselected package gcc-aarch64-linux-gnu. 389s Preparing to unpack .../025-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 389s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 389s Selecting previously unselected package gcc. 389s Preparing to unpack .../026-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 389s Unpacking gcc (4:13.2.0-7ubuntu1) ... 389s Selecting previously unselected package libstdc++-13-dev:arm64. 389s Preparing to unpack .../027-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 389s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 389s Selecting previously unselected package g++-13-aarch64-linux-gnu. 389s Preparing to unpack .../028-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 389s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 389s Selecting previously unselected package g++-13. 389s Preparing to unpack .../029-g++-13_13.2.0-17ubuntu2_arm64.deb ... 389s Unpacking g++-13 (13.2.0-17ubuntu2) ... 389s Selecting previously unselected package g++-aarch64-linux-gnu. 389s Preparing to unpack .../030-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 389s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 389s Selecting previously unselected package g++. 389s Preparing to unpack .../031-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 389s Unpacking g++ (4:13.2.0-7ubuntu1) ... 389s Selecting previously unselected package build-essential. 389s Preparing to unpack .../032-build-essential_12.10ubuntu1_arm64.deb ... 389s Unpacking build-essential (12.10ubuntu1) ... 389s Selecting previously unselected package dctrl-tools. 390s Preparing to unpack .../033-dctrl-tools_2.24-3build2_arm64.deb ... 390s Unpacking dctrl-tools (2.24-3build2) ... 390s Selecting previously unselected package fonts-dejavu-mono. 390s Preparing to unpack .../034-fonts-dejavu-mono_2.37-8_all.deb ... 390s Unpacking fonts-dejavu-mono (2.37-8) ... 390s Selecting previously unselected package fonts-dejavu-core. 390s Preparing to unpack .../035-fonts-dejavu-core_2.37-8_all.deb ... 390s Unpacking fonts-dejavu-core (2.37-8) ... 390s Selecting previously unselected package fontconfig-config. 390s Preparing to unpack .../036-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 391s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 391s Selecting previously unselected package libfontconfig1:arm64. 391s Preparing to unpack .../037-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 391s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 391s Selecting previously unselected package fontconfig. 391s Preparing to unpack .../038-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 391s Unpacking fontconfig (2.15.0-1ubuntu1) ... 391s Selecting previously unselected package fonts-font-awesome. 391s Preparing to unpack .../039-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 391s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 391s Selecting previously unselected package fonts-glyphicons-halflings. 391s Preparing to unpack .../040-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 391s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 391s Selecting previously unselected package fonts-mathjax. 391s Preparing to unpack .../041-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 391s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 391s Selecting previously unselected package libgfortran5:arm64. 391s Preparing to unpack .../042-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 391s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 391s Selecting previously unselected package libgfortran-13-dev:arm64. 391s Preparing to unpack .../043-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 391s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 391s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 391s Preparing to unpack .../044-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 391s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 391s Selecting previously unselected package gfortran-13. 391s Preparing to unpack .../045-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 391s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 391s Selecting previously unselected package gfortran-aarch64-linux-gnu. 391s Preparing to unpack .../046-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 391s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 391s Selecting previously unselected package gfortran. 391s Preparing to unpack .../047-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 391s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 391s Selecting previously unselected package icu-devtools. 392s Preparing to unpack .../048-icu-devtools_74.2-1ubuntu1_arm64.deb ... 392s Unpacking icu-devtools (74.2-1ubuntu1) ... 392s Selecting previously unselected package javascript-common. 392s Preparing to unpack .../049-javascript-common_11+nmu1_all.deb ... 392s Unpacking javascript-common (11+nmu1) ... 392s Selecting previously unselected package libblas3:arm64. 392s Preparing to unpack .../050-libblas3_3.12.0-3_arm64.deb ... 392s Unpacking libblas3:arm64 (3.12.0-3) ... 392s Selecting previously unselected package libblas-dev:arm64. 392s Preparing to unpack .../051-libblas-dev_3.12.0-3_arm64.deb ... 392s Unpacking libblas-dev:arm64 (3.12.0-3) ... 392s Selecting previously unselected package libboost1.83-dev:arm64. 392s Preparing to unpack .../052-libboost1.83-dev_1.83.0-2ubuntu1_arm64.deb ... 392s Unpacking libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 394s Selecting previously unselected package libboost-dev:arm64. 394s Preparing to unpack .../053-libboost-dev_1.83.0.1ubuntu2_arm64.deb ... 394s Unpacking libboost-dev:arm64 (1.83.0.1ubuntu2) ... 394s Selecting previously unselected package libbz2-dev:arm64. 394s Preparing to unpack .../054-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 394s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 394s Selecting previously unselected package libpixman-1-0:arm64. 394s Preparing to unpack .../055-libpixman-1-0_0.42.2-1_arm64.deb ... 394s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 394s Selecting previously unselected package libxcb-render0:arm64. 394s Preparing to unpack .../056-libxcb-render0_1.15-1_arm64.deb ... 394s Unpacking libxcb-render0:arm64 (1.15-1) ... 394s Selecting previously unselected package libxcb-shm0:arm64. 394s Preparing to unpack .../057-libxcb-shm0_1.15-1_arm64.deb ... 394s Unpacking libxcb-shm0:arm64 (1.15-1) ... 394s Selecting previously unselected package libxrender1:arm64. 394s Preparing to unpack .../058-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 394s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 394s Selecting previously unselected package libcairo2:arm64. 394s Preparing to unpack .../059-libcairo2_1.18.0-1_arm64.deb ... 394s Unpacking libcairo2:arm64 (1.18.0-1) ... 394s Selecting previously unselected package libdatrie1:arm64. 394s Preparing to unpack .../060-libdatrie1_0.2.13-3_arm64.deb ... 394s Unpacking libdatrie1:arm64 (0.2.13-3) ... 394s Selecting previously unselected package libdeflate0:arm64. 394s Preparing to unpack .../061-libdeflate0_1.19-1_arm64.deb ... 394s Unpacking libdeflate0:arm64 (1.19-1) ... 394s Selecting previously unselected package libgraphite2-3:arm64. 394s Preparing to unpack .../062-libgraphite2-3_1.3.14-2_arm64.deb ... 394s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 394s Selecting previously unselected package libharfbuzz0b:arm64. 394s Preparing to unpack .../063-libharfbuzz0b_8.3.0-2_arm64.deb ... 394s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 394s Selecting previously unselected package x11-common. 394s Preparing to unpack .../064-x11-common_1%3a7.7+23ubuntu2_all.deb ... 394s Unpacking x11-common (1:7.7+23ubuntu2) ... 394s Selecting previously unselected package libice6:arm64. 394s Preparing to unpack .../065-libice6_2%3a1.0.10-1build2_arm64.deb ... 394s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 394s Selecting previously unselected package libicu-dev:arm64. 394s Preparing to unpack .../066-libicu-dev_74.2-1ubuntu1_arm64.deb ... 394s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 395s Selecting previously unselected package libjpeg-turbo8:arm64. 395s Preparing to unpack .../067-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 395s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 395s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 395s Preparing to unpack .../068-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 395s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 395s Selecting previously unselected package libjpeg8:arm64. 395s Preparing to unpack .../069-libjpeg8_8c-2ubuntu11_arm64.deb ... 395s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 395s Selecting previously unselected package libjpeg8-dev:arm64. 395s Preparing to unpack .../070-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 395s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 395s Selecting previously unselected package libjpeg-dev:arm64. 395s Preparing to unpack .../071-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 395s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 395s Selecting previously unselected package libjs-bootstrap. 395s Preparing to unpack .../072-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 395s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 395s Selecting previously unselected package libjs-popper.js. 395s Preparing to unpack .../073-libjs-popper.js_1.16.1+ds-6_all.deb ... 395s Unpacking libjs-popper.js (1.16.1+ds-6) ... 395s Selecting previously unselected package libjs-bootstrap4. 395s Preparing to unpack .../074-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 395s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 395s Selecting previously unselected package libjs-d3. 395s Preparing to unpack .../075-libjs-d3_3.5.17-4_all.deb ... 395s Unpacking libjs-d3 (3.5.17-4) ... 395s Selecting previously unselected package libjs-es5-shim. 395s Preparing to unpack .../076-libjs-es5-shim_4.6.7-2_all.deb ... 395s Unpacking libjs-es5-shim (4.6.7-2) ... 395s Selecting previously unselected package libjs-highlight.js. 395s Preparing to unpack .../077-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 395s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 395s Selecting previously unselected package libjs-jquery. 395s Preparing to unpack .../078-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 395s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 395s Selecting previously unselected package libjs-jquery-datatables. 396s Preparing to unpack .../079-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 396s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 396s Selecting previously unselected package libjs-sifter.js. 396s Preparing to unpack .../080-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 396s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 396s Selecting previously unselected package libjs-microplugin.js. 396s Preparing to unpack .../081-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 396s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 396s Selecting previously unselected package libjs-jquery-selectize.js. 396s Preparing to unpack .../082-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 396s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 396s Selecting previously unselected package libjs-jquery-ui. 396s Preparing to unpack .../083-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 396s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 396s Selecting previously unselected package libjs-json. 396s Preparing to unpack .../084-libjs-json_0~20221030+~1.0.8-1_all.deb ... 396s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 396s Selecting previously unselected package libjs-prettify. 396s Preparing to unpack .../085-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 396s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 396s Selecting previously unselected package liblapack3:arm64. 396s Preparing to unpack .../086-liblapack3_3.12.0-3_arm64.deb ... 396s Unpacking liblapack3:arm64 (3.12.0-3) ... 396s Selecting previously unselected package liblapack-dev:arm64. 396s Preparing to unpack .../087-liblapack-dev_3.12.0-3_arm64.deb ... 396s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 396s Selecting previously unselected package liblerc4:arm64. 396s Preparing to unpack .../088-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 396s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 396s Selecting previously unselected package liblua5.4-0:arm64. 397s Preparing to unpack .../089-liblua5.4-0_5.4.6-3_arm64.deb ... 397s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 397s Selecting previously unselected package libncurses-dev:arm64. 397s Preparing to unpack .../090-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 397s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 397s Selecting previously unselected package libthai-data. 397s Preparing to unpack .../091-libthai-data_0.1.29-2_all.deb ... 397s Unpacking libthai-data (0.1.29-2) ... 397s Selecting previously unselected package libthai0:arm64. 397s Preparing to unpack .../092-libthai0_0.1.29-2_arm64.deb ... 397s Unpacking libthai0:arm64 (0.1.29-2) ... 397s Selecting previously unselected package libpango-1.0-0:arm64. 397s Preparing to unpack .../093-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 397s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 397s Selecting previously unselected package libpangoft2-1.0-0:arm64. 397s Preparing to unpack .../094-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 397s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 397s Selecting previously unselected package libpangocairo-1.0-0:arm64. 397s Preparing to unpack .../095-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 397s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 397s Selecting previously unselected package libpaper1:arm64. 398s Preparing to unpack .../096-libpaper1_1.1.29_arm64.deb ... 398s Unpacking libpaper1:arm64 (1.1.29) ... 398s Selecting previously unselected package libpaper-utils. 398s Preparing to unpack .../097-libpaper-utils_1.1.29_arm64.deb ... 398s Unpacking libpaper-utils (1.1.29) ... 398s Selecting previously unselected package libpcre2-16-0:arm64. 398s Preparing to unpack .../098-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 398s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 398s Selecting previously unselected package libpcre2-32-0:arm64. 398s Preparing to unpack .../099-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 398s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 398s Selecting previously unselected package libpcre2-posix3:arm64. 398s Preparing to unpack .../100-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 398s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 398s Selecting previously unselected package libpcre2-dev:arm64. 398s Preparing to unpack .../101-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 398s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 398s Selecting previously unselected package libpkgconf3:arm64. 398s Preparing to unpack .../102-libpkgconf3_1.8.1-2_arm64.deb ... 398s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 398s Selecting previously unselected package zlib1g-dev:arm64. 398s Preparing to unpack .../103-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 398s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 398s Selecting previously unselected package libpng-dev:arm64. 398s Preparing to unpack .../104-libpng-dev_1.6.43-1_arm64.deb ... 398s Unpacking libpng-dev:arm64 (1.6.43-1) ... 398s Selecting previously unselected package libreadline-dev:arm64. 398s Preparing to unpack .../105-libreadline-dev_8.2-3_arm64.deb ... 398s Unpacking libreadline-dev:arm64 (8.2-3) ... 398s Selecting previously unselected package libsharpyuv0:arm64. 398s Preparing to unpack .../106-libsharpyuv0_1.3.2-0.4_arm64.deb ... 398s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 398s Selecting previously unselected package libsm6:arm64. 398s Preparing to unpack .../107-libsm6_2%3a1.2.3-1build2_arm64.deb ... 398s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 398s Selecting previously unselected package libtcl8.6:arm64. 398s Preparing to unpack .../108-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 398s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 398s Selecting previously unselected package libjbig0:arm64. 398s Preparing to unpack .../109-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 398s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 398s Selecting previously unselected package libwebp7:arm64. 399s Preparing to unpack .../110-libwebp7_1.3.2-0.4_arm64.deb ... 399s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 399s Selecting previously unselected package libtiff6:arm64. 399s Preparing to unpack .../111-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 399s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 399s Selecting previously unselected package libxft2:arm64. 399s Preparing to unpack .../112-libxft2_2.3.6-1_arm64.deb ... 399s Unpacking libxft2:arm64 (2.3.6-1) ... 399s Selecting previously unselected package libxss1:arm64. 399s Preparing to unpack .../113-libxss1_1%3a1.2.3-1build2_arm64.deb ... 399s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 399s Selecting previously unselected package libtk8.6:arm64. 399s Preparing to unpack .../114-libtk8.6_8.6.13-2_arm64.deb ... 399s Unpacking libtk8.6:arm64 (8.6.13-2) ... 399s Selecting previously unselected package libxt6:arm64. 399s Preparing to unpack .../115-libxt6_1%3a1.2.1-1.1_arm64.deb ... 399s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 399s Selecting previously unselected package zip. 399s Preparing to unpack .../116-zip_3.0-13_arm64.deb ... 399s Unpacking zip (3.0-13) ... 399s Selecting previously unselected package unzip. 399s Preparing to unpack .../117-unzip_6.0-28ubuntu3_arm64.deb ... 399s Unpacking unzip (6.0-28ubuntu3) ... 399s Selecting previously unselected package xdg-utils. 399s Preparing to unpack .../118-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 399s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 399s Selecting previously unselected package r-base-core. 399s Preparing to unpack .../119-r-base-core_4.3.2-1build1_arm64.deb ... 399s Unpacking r-base-core (4.3.2-1build1) ... 399s Selecting previously unselected package r-cran-littler. 399s Preparing to unpack .../120-r-cran-littler_0.3.19-1_arm64.deb ... 399s Unpacking r-cran-littler (0.3.19-1) ... 399s Selecting previously unselected package littler. 399s Preparing to unpack .../121-littler_0.3.19-1_all.deb ... 399s Unpacking littler (0.3.19-1) ... 399s Selecting previously unselected package node-bootstrap-sass. 399s Preparing to unpack .../122-node-bootstrap-sass_3.4.3-2_all.deb ... 399s Unpacking node-bootstrap-sass (3.4.3-2) ... 399s Selecting previously unselected package node-html5shiv. 399s Preparing to unpack .../123-node-html5shiv_3.7.3+dfsg-5_all.deb ... 399s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 399s Selecting previously unselected package node-normalize.css. 399s Preparing to unpack .../124-node-normalize.css_8.0.1-5_all.deb ... 399s Unpacking node-normalize.css (8.0.1-5) ... 399s Selecting previously unselected package pandoc-data. 399s Preparing to unpack .../125-pandoc-data_3.1.3-1_all.deb ... 399s Unpacking pandoc-data (3.1.3-1) ... 400s Selecting previously unselected package pandoc. 400s Preparing to unpack .../126-pandoc_3.1.3+ds-2_arm64.deb ... 400s Unpacking pandoc (3.1.3+ds-2) ... 401s Selecting previously unselected package pkgconf-bin. 401s Preparing to unpack .../127-pkgconf-bin_1.8.1-2_arm64.deb ... 401s Unpacking pkgconf-bin (1.8.1-2) ... 401s Selecting previously unselected package pkgconf:arm64. 401s Preparing to unpack .../128-pkgconf_1.8.1-2_arm64.deb ... 401s Unpacking pkgconf:arm64 (1.8.1-2) ... 401s Selecting previously unselected package pkg-config:arm64. 401s Preparing to unpack .../129-pkg-config_1.8.1-2_arm64.deb ... 401s Unpacking pkg-config:arm64 (1.8.1-2) ... 401s Selecting previously unselected package liblzma-dev:arm64. 401s Preparing to unpack .../130-liblzma-dev_5.4.5-0.3_arm64.deb ... 401s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 401s Selecting previously unselected package r-base-dev. 401s Preparing to unpack .../131-r-base-dev_4.3.2-1build1_all.deb ... 401s Unpacking r-base-dev (4.3.2-1build1) ... 401s Selecting previously unselected package pkg-r-autopkgtest. 401s Preparing to unpack .../132-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 401s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 401s Selecting previously unselected package r-bioc-biocgenerics. 401s Preparing to unpack .../133-r-bioc-biocgenerics_0.48.1-2_all.deb ... 401s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 401s Selecting previously unselected package r-bioc-biobase. 401s Preparing to unpack .../134-r-bioc-biobase_2.62.0-1_arm64.deb ... 401s Unpacking r-bioc-biobase (2.62.0-1) ... 401s Selecting previously unselected package r-bioc-s4vectors. 401s Preparing to unpack .../135-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 401s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 401s Selecting previously unselected package r-bioc-iranges. 401s Preparing to unpack .../136-r-bioc-iranges_2.36.0-1_arm64.deb ... 401s Unpacking r-bioc-iranges (2.36.0-1) ... 401s Selecting previously unselected package r-cran-dbi. 401s Preparing to unpack .../137-r-cran-dbi_1.2.2-1_all.deb ... 401s Unpacking r-cran-dbi (1.2.2-1) ... 401s Selecting previously unselected package r-cran-bit. 401s Preparing to unpack .../138-r-cran-bit_4.0.5-1_arm64.deb ... 401s Unpacking r-cran-bit (4.0.5-1) ... 401s Selecting previously unselected package r-cran-bit64. 401s Preparing to unpack .../139-r-cran-bit64_4.0.5-1_arm64.deb ... 401s Unpacking r-cran-bit64 (4.0.5-1) ... 401s Selecting previously unselected package r-cran-rlang. 401s Preparing to unpack .../140-r-cran-rlang_1.1.3-1_arm64.deb ... 401s Unpacking r-cran-rlang (1.1.3-1) ... 401s Selecting previously unselected package r-cran-cli. 401s Preparing to unpack .../141-r-cran-cli_3.6.2-1_arm64.deb ... 401s Unpacking r-cran-cli (3.6.2-1) ... 401s Selecting previously unselected package r-cran-glue. 401s Preparing to unpack .../142-r-cran-glue_1.7.0-1_arm64.deb ... 401s Unpacking r-cran-glue (1.7.0-1) ... 402s Selecting previously unselected package r-cran-lifecycle. 402s Preparing to unpack .../143-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 402s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 402s Selecting previously unselected package r-cran-vctrs. 402s Preparing to unpack .../144-r-cran-vctrs_0.6.5-1_arm64.deb ... 402s Unpacking r-cran-vctrs (0.6.5-1) ... 402s Selecting previously unselected package r-cran-blob. 402s Preparing to unpack .../145-r-cran-blob_1.2.4-1_all.deb ... 402s Unpacking r-cran-blob (1.2.4-1) ... 402s Selecting previously unselected package r-cran-fastmap. 402s Preparing to unpack .../146-r-cran-fastmap_1.1.1-1_arm64.deb ... 402s Unpacking r-cran-fastmap (1.1.1-1) ... 402s Selecting previously unselected package r-cran-cachem. 402s Preparing to unpack .../147-r-cran-cachem_1.0.8-1_arm64.deb ... 402s Unpacking r-cran-cachem (1.0.8-1) ... 402s Selecting previously unselected package r-cran-memoise. 402s Preparing to unpack .../148-r-cran-memoise_2.0.1-1_all.deb ... 402s Unpacking r-cran-memoise (2.0.1-1) ... 402s Selecting previously unselected package r-cran-pkgconfig. 402s Preparing to unpack .../149-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 402s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 402s Selecting previously unselected package r-cran-plogr. 402s Preparing to unpack .../150-r-cran-plogr_0.2.0-3build1_all.deb ... 402s Unpacking r-cran-plogr (0.2.0-3build1) ... 402s Selecting previously unselected package r-cran-cpp11. 402s Preparing to unpack .../151-r-cran-cpp11_0.4.7-1_all.deb ... 402s Unpacking r-cran-cpp11 (0.4.7-1) ... 402s Selecting previously unselected package r-cran-rsqlite. 402s Preparing to unpack .../152-r-cran-rsqlite_2.3.4-1_arm64.deb ... 402s Unpacking r-cran-rsqlite (2.3.4-1) ... 402s Selecting previously unselected package r-cran-curl. 402s Preparing to unpack .../153-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 402s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 402s Selecting previously unselected package r-cran-jsonlite. 402s Preparing to unpack .../154-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 402s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 402s Selecting previously unselected package r-cran-mime. 403s Preparing to unpack .../155-r-cran-mime_0.12-1_arm64.deb ... 403s Unpacking r-cran-mime (0.12-1) ... 403s Selecting previously unselected package r-cran-sys. 403s Preparing to unpack .../156-r-cran-sys_3.4.2-1_arm64.deb ... 403s Unpacking r-cran-sys (3.4.2-1) ... 403s Selecting previously unselected package r-cran-askpass. 403s Preparing to unpack .../157-r-cran-askpass_1.2.0-1_arm64.deb ... 403s Unpacking r-cran-askpass (1.2.0-1) ... 403s Selecting previously unselected package r-cran-openssl. 403s Preparing to unpack .../158-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 403s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 403s Selecting previously unselected package r-cran-r6. 403s Preparing to unpack .../159-r-cran-r6_2.5.1-1_all.deb ... 403s Unpacking r-cran-r6 (2.5.1-1) ... 403s Selecting previously unselected package r-cran-httr. 403s Preparing to unpack .../160-r-cran-httr_1.4.7+dfsg-1_all.deb ... 403s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 403s Selecting previously unselected package r-cran-png. 403s Preparing to unpack .../161-r-cran-png_0.1-8-1_arm64.deb ... 403s Unpacking r-cran-png (0.1-8-1) ... 403s Selecting previously unselected package r-bioc-zlibbioc. 403s Preparing to unpack .../162-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 403s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 403s Selecting previously unselected package r-bioc-xvector. 403s Preparing to unpack .../163-r-bioc-xvector_0.42.0-1_arm64.deb ... 403s Unpacking r-bioc-xvector (0.42.0-1) ... 403s Selecting previously unselected package r-cran-bitops. 403s Preparing to unpack .../164-r-cran-bitops_1.0-7-1_arm64.deb ... 403s Unpacking r-cran-bitops (1.0-7-1) ... 403s Selecting previously unselected package r-cran-rcurl. 403s Preparing to unpack .../165-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 403s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 403s Selecting previously unselected package r-bioc-genomeinfodbdata. 403s Preparing to unpack .../166-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 403s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 403s Selecting previously unselected package r-bioc-genomeinfodb. 403s Preparing to unpack .../167-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 403s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 403s Selecting previously unselected package r-cran-crayon. 403s Preparing to unpack .../168-r-cran-crayon_1.5.2-1_all.deb ... 403s Unpacking r-cran-crayon (1.5.2-1) ... 403s Selecting previously unselected package r-bioc-biostrings. 403s Preparing to unpack .../169-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 403s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 403s Selecting previously unselected package r-bioc-keggrest. 403s Preparing to unpack .../170-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 403s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 403s Selecting previously unselected package r-bioc-annotationdbi. 403s Preparing to unpack .../171-r-bioc-annotationdbi_1.64.1-1_all.deb ... 403s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 403s Selecting previously unselected package r-cran-generics. 403s Preparing to unpack .../172-r-cran-generics_0.1.3-1_all.deb ... 403s Unpacking r-cran-generics (0.1.3-1) ... 403s Selecting previously unselected package r-cran-magrittr. 404s Preparing to unpack .../173-r-cran-magrittr_2.0.3-1_arm64.deb ... 404s Unpacking r-cran-magrittr (2.0.3-1) ... 404s Selecting previously unselected package r-cran-fansi. 404s Preparing to unpack .../174-r-cran-fansi_1.0.5-1_arm64.deb ... 404s Unpacking r-cran-fansi (1.0.5-1) ... 404s Selecting previously unselected package r-cran-utf8. 404s Preparing to unpack .../175-r-cran-utf8_1.2.4-1_arm64.deb ... 404s Unpacking r-cran-utf8 (1.2.4-1) ... 404s Selecting previously unselected package r-cran-pillar. 404s Preparing to unpack .../176-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 404s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 404s Selecting previously unselected package r-cran-tibble. 404s Preparing to unpack .../177-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 404s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 404s Selecting previously unselected package r-cran-withr. 404s Preparing to unpack .../178-r-cran-withr_2.5.0-1_all.deb ... 404s Unpacking r-cran-withr (2.5.0-1) ... 404s Selecting previously unselected package r-cran-tidyselect. 404s Preparing to unpack .../179-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 404s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 404s Selecting previously unselected package r-cran-dplyr. 404s Preparing to unpack .../180-r-cran-dplyr_1.1.4-1_arm64.deb ... 404s Unpacking r-cran-dplyr (1.1.4-1) ... 404s Selecting previously unselected package r-cran-purrr. 404s Preparing to unpack .../181-r-cran-purrr_1.0.2-1_arm64.deb ... 404s Unpacking r-cran-purrr (1.0.2-1) ... 404s Selecting previously unselected package r-cran-stringi. 404s Preparing to unpack .../182-r-cran-stringi_1.8.3-1_arm64.deb ... 404s Unpacking r-cran-stringi (1.8.3-1) ... 404s Selecting previously unselected package r-cran-stringr. 404s Preparing to unpack .../183-r-cran-stringr_1.5.1-1_all.deb ... 404s Unpacking r-cran-stringr (1.5.1-1) ... 404s Selecting previously unselected package r-cran-tidyr. 404s Preparing to unpack .../184-r-cran-tidyr_1.3.1-1_arm64.deb ... 404s Unpacking r-cran-tidyr (1.3.1-1) ... 404s Selecting previously unselected package r-cran-dbplyr. 404s Preparing to unpack .../185-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 404s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 404s Selecting previously unselected package r-cran-filelock. 404s Preparing to unpack .../186-r-cran-filelock_1.0.3-1_arm64.deb ... 404s Unpacking r-cran-filelock (1.0.3-1) ... 404s Selecting previously unselected package r-bioc-biocfilecache. 404s Preparing to unpack .../187-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 404s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 404s Selecting previously unselected package r-bioc-biocio. 404s Preparing to unpack .../188-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 404s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 404s Selecting previously unselected package r-cran-formatr. 404s Preparing to unpack .../189-r-cran-formatr_1.14-1_all.deb ... 404s Unpacking r-cran-formatr (1.14-1) ... 405s Selecting previously unselected package r-cran-lambda.r. 405s Preparing to unpack .../190-r-cran-lambda.r_1.2.4-2build1_all.deb ... 405s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 405s Selecting previously unselected package r-cran-futile.options. 405s Preparing to unpack .../191-r-cran-futile.options_1.0.1-3build1_all.deb ... 405s Unpacking r-cran-futile.options (1.0.1-3build1) ... 405s Selecting previously unselected package r-cran-futile.logger. 405s Preparing to unpack .../192-r-cran-futile.logger_1.4.3-4build1_all.deb ... 405s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 405s Selecting previously unselected package r-cran-snow. 405s Preparing to unpack .../193-r-cran-snow_1%3a0.4.4-2_all.deb ... 405s Unpacking r-cran-snow (1:0.4.4-2) ... 405s Selecting previously unselected package r-cran-codetools. 405s Preparing to unpack .../194-r-cran-codetools_0.2-19-1_all.deb ... 405s Unpacking r-cran-codetools (0.2-19-1) ... 405s Selecting previously unselected package r-cran-bh. 405s Preparing to unpack .../195-r-cran-bh_1.84.0-1_all.deb ... 405s Unpacking r-cran-bh (1.84.0-1) ... 405s Selecting previously unselected package r-bioc-biocparallel. 405s Preparing to unpack .../196-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 405s Unpacking r-bioc-biocparallel (1.36.0-1) ... 405s Selecting previously unselected package r-cran-xml. 405s Preparing to unpack .../197-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 405s Unpacking r-cran-xml (3.99-0.16.1-1) ... 405s Selecting previously unselected package r-cran-hms. 405s Preparing to unpack .../198-r-cran-hms_1.1.3-1_all.deb ... 405s Unpacking r-cran-hms (1.1.3-1) ... 405s Selecting previously unselected package r-cran-prettyunits. 405s Preparing to unpack .../199-r-cran-prettyunits_1.2.0-1_all.deb ... 405s Unpacking r-cran-prettyunits (1.2.0-1) ... 405s Selecting previously unselected package r-cran-progress. 405s Preparing to unpack .../200-r-cran-progress_1.2.3-1_all.deb ... 405s Unpacking r-cran-progress (1.2.3-1) ... 405s Selecting previously unselected package r-cran-digest. 405s Preparing to unpack .../201-r-cran-digest_0.6.34-1_arm64.deb ... 405s Unpacking r-cran-digest (0.6.34-1) ... 405s Selecting previously unselected package r-cran-rappdirs. 405s Preparing to unpack .../202-r-cran-rappdirs_0.3.3-1_arm64.deb ... 405s Unpacking r-cran-rappdirs (0.3.3-1) ... 405s Selecting previously unselected package r-cran-xml2. 405s Preparing to unpack .../203-r-cran-xml2_1.3.6-1_arm64.deb ... 405s Unpacking r-cran-xml2 (1.3.6-1) ... 405s Selecting previously unselected package r-bioc-biomart. 405s Preparing to unpack .../204-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 405s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 405s Selecting previously unselected package r-cran-pkgkitten. 405s Preparing to unpack .../205-r-cran-pkgkitten_0.2.3-1_all.deb ... 405s Unpacking r-cran-pkgkitten (0.2.3-1) ... 405s Selecting previously unselected package r-cran-rcpp. 405s Preparing to unpack .../206-r-cran-rcpp_1.0.12-1_arm64.deb ... 405s Unpacking r-cran-rcpp (1.0.12-1) ... 405s Selecting previously unselected package r-bioc-genomicranges. 405s Preparing to unpack .../207-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 405s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 405s Selecting previously unselected package r-bioc-rhtslib. 405s Preparing to unpack .../208-r-bioc-rhtslib_2.4.1+dfsg-1_arm64.deb ... 405s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 406s Selecting previously unselected package r-bioc-rsamtools. 406s Preparing to unpack .../209-r-bioc-rsamtools_2.18.0+dfsg-1_arm64.deb ... 406s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 406s Selecting previously unselected package r-cran-matrixstats. 406s Preparing to unpack .../210-r-cran-matrixstats_1.2.0-1_arm64.deb ... 406s Unpacking r-cran-matrixstats (1.2.0-1) ... 406s Selecting previously unselected package r-bioc-matrixgenerics. 406s Preparing to unpack .../211-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 406s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 406s Selecting previously unselected package r-cran-lattice. 406s Preparing to unpack .../212-r-cran-lattice_0.22-5-1_arm64.deb ... 406s Unpacking r-cran-lattice (0.22-5-1) ... 406s Selecting previously unselected package r-cran-matrix. 406s Preparing to unpack .../213-r-cran-matrix_1.6-5-1_arm64.deb ... 406s Unpacking r-cran-matrix (1.6-5-1) ... 406s Selecting previously unselected package r-cran-abind. 406s Preparing to unpack .../214-r-cran-abind_1.4-5-2_all.deb ... 406s Unpacking r-cran-abind (1.4-5-2) ... 406s Selecting previously unselected package r-bioc-s4arrays. 406s Preparing to unpack .../215-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 406s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 406s Selecting previously unselected package r-bioc-sparsearray. 406s Preparing to unpack .../216-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 406s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 406s Selecting previously unselected package r-bioc-delayedarray. 406s Preparing to unpack .../217-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 406s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 406s Selecting previously unselected package r-bioc-summarizedexperiment. 406s Preparing to unpack .../218-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 406s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 406s Selecting previously unselected package r-bioc-genomicalignments. 406s Preparing to unpack .../219-r-bioc-genomicalignments_1.38.2-1_arm64.deb ... 406s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 406s Selecting previously unselected package r-cran-rjson. 406s Preparing to unpack .../220-r-cran-rjson_0.2.21-1_arm64.deb ... 406s Unpacking r-cran-rjson (0.2.21-1) ... 406s Selecting previously unselected package r-cran-yaml. 406s Preparing to unpack .../221-r-cran-yaml_2.3.8-1_arm64.deb ... 406s Unpacking r-cran-yaml (2.3.8-1) ... 406s Selecting previously unselected package r-cran-restfulr. 406s Preparing to unpack .../222-r-cran-restfulr_0.0.15-1_arm64.deb ... 406s Unpacking r-cran-restfulr (0.0.15-1) ... 406s Selecting previously unselected package r-bioc-rtracklayer. 406s Preparing to unpack .../223-r-bioc-rtracklayer_1.62.0-1_arm64.deb ... 406s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 406s Selecting previously unselected package r-bioc-genomicfeatures. 407s Preparing to unpack .../224-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 407s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 407s Selecting previously unselected package r-cran-iterators. 407s Preparing to unpack .../225-r-cran-iterators_1.0.14-1_all.deb ... 407s Unpacking r-cran-iterators (1.0.14-1) ... 407s Selecting previously unselected package r-cran-foreach. 407s Preparing to unpack .../226-r-cran-foreach_1.5.2-1_all.deb ... 407s Unpacking r-cran-foreach (1.5.2-1) ... 407s Selecting previously unselected package r-cran-doparallel. 407s Preparing to unpack .../227-r-cran-doparallel_1.0.17-1_all.deb ... 407s Unpacking r-cran-doparallel (1.0.17-1) ... 407s Selecting previously unselected package r-cran-gtable. 407s Preparing to unpack .../228-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 407s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 407s Selecting previously unselected package r-cran-isoband. 407s Preparing to unpack .../229-r-cran-isoband_0.2.7-1_arm64.deb ... 407s Unpacking r-cran-isoband (0.2.7-1) ... 407s Selecting previously unselected package r-cran-mass. 407s Preparing to unpack .../230-r-cran-mass_7.3-60.0.1-1_arm64.deb ... 407s Unpacking r-cran-mass (7.3-60.0.1-1) ... 407s Selecting previously unselected package r-cran-nlme. 407s Preparing to unpack .../231-r-cran-nlme_3.1.164-1_arm64.deb ... 407s Unpacking r-cran-nlme (3.1.164-1) ... 407s Selecting previously unselected package r-cran-mgcv. 407s Preparing to unpack .../232-r-cran-mgcv_1.9-1-1_arm64.deb ... 407s Unpacking r-cran-mgcv (1.9-1-1) ... 407s Selecting previously unselected package r-cran-farver. 407s Preparing to unpack .../233-r-cran-farver_2.1.1-1_arm64.deb ... 407s Unpacking r-cran-farver (2.1.1-1) ... 407s Selecting previously unselected package r-cran-labeling. 407s Preparing to unpack .../234-r-cran-labeling_0.4.3-1_all.deb ... 407s Unpacking r-cran-labeling (0.4.3-1) ... 407s Selecting previously unselected package r-cran-colorspace. 407s Preparing to unpack .../235-r-cran-colorspace_2.1-0+dfsg-1_arm64.deb ... 407s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 407s Selecting previously unselected package r-cran-munsell. 407s Preparing to unpack .../236-r-cran-munsell_0.5.0-2build1_all.deb ... 407s Unpacking r-cran-munsell (0.5.0-2build1) ... 408s Selecting previously unselected package r-cran-rcolorbrewer. 408s Preparing to unpack .../237-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 408s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 408s Selecting previously unselected package r-cran-viridislite. 408s Preparing to unpack .../238-r-cran-viridislite_0.4.2-2_all.deb ... 408s Unpacking r-cran-viridislite (0.4.2-2) ... 408s Selecting previously unselected package r-cran-scales. 408s Preparing to unpack .../239-r-cran-scales_1.3.0-1_all.deb ... 408s Unpacking r-cran-scales (1.3.0-1) ... 408s Selecting previously unselected package r-cran-ggplot2. 408s Preparing to unpack .../240-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 408s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 408s Selecting previously unselected package r-cran-base64enc. 408s Preparing to unpack .../241-r-cran-base64enc_0.1-3-3_arm64.deb ... 408s Unpacking r-cran-base64enc (0.1-3-3) ... 408s Selecting previously unselected package r-cran-ellipsis. 408s Preparing to unpack .../242-r-cran-ellipsis_0.3.2-2_arm64.deb ... 408s Unpacking r-cran-ellipsis (0.3.2-2) ... 408s Selecting previously unselected package r-cran-htmltools. 408s Preparing to unpack .../243-r-cran-htmltools_0.5.7-1_arm64.deb ... 408s Unpacking r-cran-htmltools (0.5.7-1) ... 408s Selecting previously unselected package r-cran-evaluate. 408s Preparing to unpack .../244-r-cran-evaluate_0.23-1_all.deb ... 408s Unpacking r-cran-evaluate (0.23-1) ... 408s Selecting previously unselected package r-cran-xfun. 408s Preparing to unpack .../245-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 408s Unpacking r-cran-xfun (0.41+dfsg-1) ... 408s Selecting previously unselected package r-cran-highr. 408s Preparing to unpack .../246-r-cran-highr_0.10+dfsg-1_all.deb ... 408s Unpacking r-cran-highr (0.10+dfsg-1) ... 408s Selecting previously unselected package libjs-mathjax. 408s Preparing to unpack .../247-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 408s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 409s Selecting previously unselected package r-cran-knitr. 409s Preparing to unpack .../248-r-cran-knitr_1.45+dfsg-1_all.deb ... 409s Unpacking r-cran-knitr (1.45+dfsg-1) ... 409s Selecting previously unselected package r-cran-jquerylib. 409s Preparing to unpack .../249-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 409s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 409s Selecting previously unselected package r-cran-fs. 409s Preparing to unpack .../250-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 409s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 410s Selecting previously unselected package r-cran-sass. 410s Preparing to unpack .../251-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 410s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 410s Selecting previously unselected package r-cran-bslib. 410s Preparing to unpack .../252-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 410s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 410s Selecting previously unselected package r-cran-fontawesome. 410s Preparing to unpack .../253-r-cran-fontawesome_0.5.2-1_all.deb ... 410s Unpacking r-cran-fontawesome (0.5.2-1) ... 410s Selecting previously unselected package r-cran-tinytex. 410s Preparing to unpack .../254-r-cran-tinytex_0.49-1_all.deb ... 410s Unpacking r-cran-tinytex (0.49-1) ... 410s Selecting previously unselected package libjs-modernizr. 410s Preparing to unpack .../255-libjs-modernizr_2.6.2+ds1-5_all.deb ... 410s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 410s Selecting previously unselected package r-cran-later. 410s Preparing to unpack .../256-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 410s Unpacking r-cran-later (1.3.2+dfsg-1) ... 410s Selecting previously unselected package r-cran-promises. 410s Preparing to unpack .../257-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 410s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 410s Selecting previously unselected package r-cran-httpuv. 410s Preparing to unpack .../258-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 410s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 410s Selecting previously unselected package r-cran-xtable. 410s Preparing to unpack .../259-r-cran-xtable_1%3a1.8-4-2_all.deb ... 410s Unpacking r-cran-xtable (1:1.8-4-2) ... 410s Selecting previously unselected package r-cran-sourcetools. 411s Preparing to unpack .../260-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 411s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 411s Selecting previously unselected package r-cran-commonmark. 411s Preparing to unpack .../261-r-cran-commonmark_1.9.1-1_arm64.deb ... 411s Unpacking r-cran-commonmark (1.9.1-1) ... 411s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 411s Preparing to unpack .../262-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 411s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 411s Selecting previously unselected package r-cran-shiny. 411s Preparing to unpack .../263-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 411s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 411s Selecting previously unselected package r-cran-rmarkdown. 411s Preparing to unpack .../264-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 411s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 411s Selecting previously unselected package r-cran-htmlwidgets. 411s Preparing to unpack .../265-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 411s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 411s Selecting previously unselected package r-cran-lazyeval. 411s Preparing to unpack .../266-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 411s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 411s Selecting previously unselected package r-cran-crosstalk. 411s Preparing to unpack .../267-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 411s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 411s Selecting previously unselected package r-cran-data.table. 411s Preparing to unpack .../268-r-cran-data.table_1.14.10+dfsg-1_arm64.deb ... 411s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 411s Selecting previously unselected package r-cran-miniui. 411s Preparing to unpack .../269-r-cran-miniui_0.1.1.1-3build1_all.deb ... 411s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 411s Selecting previously unselected package r-cran-shinyjs. 411s Preparing to unpack .../270-r-cran-shinyjs_2.1.0-1_all.deb ... 411s Unpacking r-cran-shinyjs (2.1.0-1) ... 411s Selecting previously unselected package r-cran-colourpicker. 411s Preparing to unpack .../271-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 411s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 411s Selecting previously unselected package r-cran-plotly. 412s Preparing to unpack .../272-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 412s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 412s Selecting previously unselected package r-cran-gridextra. 412s Preparing to unpack .../273-r-cran-gridextra_2.3-3build1_all.deb ... 412s Unpacking r-cran-gridextra (2.3-3build1) ... 412s Selecting previously unselected package r-cran-viridis. 412s Preparing to unpack .../274-r-cran-viridis_0.6.5-1_all.deb ... 412s Unpacking r-cran-viridis (0.6.5-1) ... 412s Selecting previously unselected package r-cran-dendextend. 412s Preparing to unpack .../275-r-cran-dendextend_1.17.1+dfsg-1_all.deb ... 412s Unpacking r-cran-dendextend (1.17.1+dfsg-1) ... 412s Selecting previously unselected package r-cran-plyr. 412s Preparing to unpack .../276-r-cran-plyr_1.8.9-1_arm64.deb ... 412s Unpacking r-cran-plyr (1.8.9-1) ... 412s Selecting previously unselected package r-cran-reshape2. 412s Preparing to unpack .../277-r-cran-reshape2_1.4.4-2build1_arm64.deb ... 412s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 412s Selecting previously unselected package r-cran-ca. 412s Preparing to unpack .../278-r-cran-ca_0.71.1-2build1_all.deb ... 412s Unpacking r-cran-ca (0.71.1-2build1) ... 412s Selecting previously unselected package r-cran-cluster. 412s Preparing to unpack .../279-r-cran-cluster_2.1.6-1_arm64.deb ... 412s Unpacking r-cran-cluster (2.1.6-1) ... 412s Selecting previously unselected package r-cran-gclus. 412s Preparing to unpack .../280-r-cran-gclus_1.3.2-2build1_all.deb ... 412s Unpacking r-cran-gclus (1.3.2-2build1) ... 412s Selecting previously unselected package r-cran-qap. 412s Preparing to unpack .../281-r-cran-qap_0.1-2-1_arm64.deb ... 412s Unpacking r-cran-qap (0.1-2-1) ... 413s Selecting previously unselected package r-cran-registry. 413s Preparing to unpack .../282-r-cran-registry_0.5-1-2build1_all.deb ... 413s Unpacking r-cran-registry (0.5-1-2build1) ... 413s Selecting previously unselected package r-cran-tsp. 413s Preparing to unpack .../283-r-cran-tsp_1.2-4-1_arm64.deb ... 413s Unpacking r-cran-tsp (1.2-4-1) ... 413s Selecting previously unselected package r-cran-permute. 413s Preparing to unpack .../284-r-cran-permute_0.9-7-1_all.deb ... 413s Unpacking r-cran-permute (0.9-7-1) ... 413s Selecting previously unselected package r-cran-vegan. 413s Preparing to unpack .../285-r-cran-vegan_2.6-4+dfsg-1_arm64.deb ... 413s Unpacking r-cran-vegan (2.6-4+dfsg-1) ... 413s Selecting previously unselected package r-cran-seriation. 413s Preparing to unpack .../286-r-cran-seriation_1.5.4-1_arm64.deb ... 413s Unpacking r-cran-seriation (1.5.4-1) ... 413s Selecting previously unselected package r-cran-ps. 413s Preparing to unpack .../287-r-cran-ps_1.7.6-1_arm64.deb ... 413s Unpacking r-cran-ps (1.7.6-1) ... 413s Selecting previously unselected package r-cran-processx. 413s Preparing to unpack .../288-r-cran-processx_3.8.3-1_arm64.deb ... 413s Unpacking 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418s Setting up r-cran-data.table (1.14.10+dfsg-1) ... 418s Setting up r-cran-glue (1.7.0-1) ... 418s Setting up r-cran-bit (4.0.5-1) ... 418s Setting up r-cran-xtable (1:1.8-4-2) ... 418s Setting up r-cran-cli (3.6.2-1) ... 418s Setting up gfortran (4:13.2.0-7ubuntu1) ... 418s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 418s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 418s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 418s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 418s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 418s Setting up r-cran-bitops (1.0-7-1) ... 418s Setting up r-cran-bit64 (4.0.5-1) ... 418s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 418s Setting up r-cran-askpass (1.2.0-1) ... 418s Setting up r-cran-fastmap (1.1.1-1) ... 418s Setting up r-cran-png (0.1-8-1) ... 418s Setting up r-bioc-biobase (2.62.0-1) ... 418s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 418s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 418s Setting up r-cran-utf8 (1.2.4-1) ... 418s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 418s Setting up r-cran-stringi (1.8.3-1) ... 418s Setting up r-cran-cpp11 (0.4.7-1) ... 418s Setting up r-cran-plyr (1.8.9-1) ... 418s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 418s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 418s Setting up r-cran-isoband (0.2.7-1) ... 418s Setting up r-cran-futile.logger (1.4.3-4build1) ... 418s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 418s Setting up r-cran-later (1.3.2+dfsg-1) ... 418s Setting up r-cran-matrix (1.6-5-1) ... 418s Setting up r-cran-doparallel (1.0.17-1) ... 418s Setting up r-cran-tinytex (0.49-1) ... 418s Setting up r-cran-knitr (1.45+dfsg-1) ... 418s Setting up r-cran-mgcv (1.9-1-1) ... 418s Setting up g++ (4:13.2.0-7ubuntu1) ... 418s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 418s Setting up r-cran-cachem (1.0.8-1) ... 418s Setting up build-essential (12.10ubuntu1) ... 418s Setting up r-cran-rcpparmadillo (0.12.8.0.0-1) ... 418s Setting up r-bioc-iranges (2.36.0-1) ... 418s Setting up r-cran-rjson (0.2.21-1) ... 418s Setting up r-cran-tsp (1.2-4-1) ... 418s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 418s Setting up r-cran-restfulr (0.0.15-1) ... 418s Setting up r-cran-vctrs (0.6.5-1) ... 418s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 418s Setting up r-cran-ellipsis (0.3.2-2) ... 418s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 418s Setting up r-base-dev (4.3.2-1build1) ... 418s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 418s Setting up r-cran-stringr (1.5.1-1) ... 418s Setting up r-bioc-biocparallel (1.36.0-1) ... 418s Setting up r-cran-callr (3.7.3-2) ... 418s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 418s Setting up r-cran-xml2 (1.3.6-1) ... 418s Setting up r-cran-munsell (0.5.0-2build1) ... 418s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 418s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 418s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 418s Setting up r-cran-reshape2 (1.4.4-2build1) ... 418s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 418s Setting up r-cran-httr (1.4.7+dfsg-1) ... 418s Setting up r-cran-gridextra (2.3-3build1) ... 418s Setting up r-cran-hms (1.1.3-1) ... 418s Setting up r-cran-scales (1.3.0-1) ... 418s Setting up r-cran-memoise (2.0.1-1) ... 418s Setting up r-cran-promises (1.2.1+dfsg-1) ... 418s Setting up r-cran-purrr (1.0.2-1) ... 418s Setting up r-cran-vegan (2.6-4+dfsg-1) ... 418s Setting up r-cran-blob (1.2.4-1) ... 418s Setting up r-cran-htmltools (0.5.7-1) ... 418s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 418s Setting up r-bioc-xvector (0.42.0-1) ... 418s Setting up r-cran-sass (0.4.8+dfsg-1) ... 418s Setting up r-cran-seriation (1.5.4-1) ... 418s Setting up r-cran-dplyr (1.1.4-1) ... 418s Setting up r-cran-rsqlite (2.3.4-1) ... 418s Setting up r-cran-progress (1.2.3-1) ... 418s Setting up r-cran-webshot (0.5.5-1) ... 418s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 418s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 418s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 418s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 418s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 418s Setting up r-cran-fontawesome (0.5.2-1) ... 418s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 418s Setting up r-cran-viridis (0.6.5-1) ... 418s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 418s Setting up r-cran-tidyr (1.3.1-1) ... 418s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 418s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 418s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 418s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 418s Setting up r-cran-dendextend (1.17.1+dfsg-1) ... 418s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 418s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 418s Setting up r-cran-egg (0.4.5-3build1) ... 418s Setting up r-bioc-annotationdbi (1.64.1-1) ... 418s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 418s Setting up r-cran-shinyjs (2.1.0-1) ... 418s Setting up r-cran-miniui (0.1.1.1-3build1) ... 418s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 418s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 418s Setting up r-bioc-genomicalignments (1.38.2-1) ... 418s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 418s Setting up r-bioc-rtracklayer (1.62.0-1) ... 418s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 418s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 418s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 418s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 418s Setting up r-cran-heatmaply (1.5.0+dfsg-1) ... 418s Setting up r-bioc-degnorm (1.12.0+ds-1) ... 418s Setting up autopkgtest-satdep (0) ... 418s Processing triggers for man-db (2.12.0-3) ... 419s Processing triggers for install-info (7.1-3) ... 419s Processing triggers for libc-bin (2.39-0ubuntu2) ... 434s (Reading database ... 118701 files and directories currently installed.) 434s Removing autopkgtest-satdep (0) ... 434s autopkgtest [13:47:06]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 434s autopkgtest [13:47:06]: test pkg-r-autopkgtest: [----------------------- 434s Test: Try to load the R library DegNorm 435s 435s R version 4.3.2 (2023-10-31) -- "Eye Holes" 435s Copyright (C) 2023 The R Foundation for Statistical Computing 435s Platform: aarch64-unknown-linux-gnu (64-bit) 435s 435s R is free software and comes with ABSOLUTELY NO WARRANTY. 435s You are welcome to redistribute it under certain conditions. 435s Type 'license()' or 'licence()' for distribution details. 435s 435s R is a collaborative project with many contributors. 435s Type 'contributors()' for more information and 435s 'citation()' on how to cite R or R packages in publications. 435s 435s Type 'demo()' for some demos, 'help()' for on-line help, or 435s 'help.start()' for an HTML browser interface to help. 435s Type 'q()' to quit R. 435s 435s > library('DegNorm') 446s > 446s > 447s Other tests are currently unsupported! 447s They will be progressively added. 447s autopkgtest [13:47:19]: test pkg-r-autopkgtest: -----------------------] 448s pkg-r-autopkgtest PASS 448s autopkgtest [13:47:20]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 448s autopkgtest [13:47:20]: @@@@@@@@@@@@@@@@@@@@ summary 448s pkg-r-autopkgtest PASS 459s Creating nova instance adt-noble-arm64-r-bioc-degnorm-20240316-133952-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...