0s autopkgtest [17:23:49]: starting date and time: 2024-03-16 17:23:49+0000 0s autopkgtest [17:23:49]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:23:49]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.kxpokbdk/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-bladderbatch --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-11.secgroup --name adt-noble-arm64-r-bioc-bladderbatch-20240316-172349-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 146s autopkgtest [17:26:15]: testbed dpkg architecture: arm64 150s autopkgtest [17:26:19]: testbed apt version: 2.7.12 150s autopkgtest [17:26:19]: @@@@@@@@@@@@@@@@@@@@ test bed setup 153s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 154s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 155s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 155s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 155s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 155s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 155s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 155s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 155s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 155s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB] 155s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 155s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 155s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 157s Fetched 9060 kB in 3s (2842 kB/s) 158s Reading package lists... 169s Reading package lists... 170s Building dependency tree... 170s Reading state information... 170s Calculating upgrade... 171s The following packages will be REMOVED: 171s libglib2.0-0 libssl3 171s The following NEW packages will be installed: 171s libglib2.0-0t64 libssl3t64 xdg-user-dirs 171s The following packages have been kept back: 171s curl 171s The following packages will be upgraded: 171s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 171s ubuntu-minimal ubuntu-standard 171s 7 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 171s Need to get 4613 kB of archives. 171s After this operation, 211 kB of additional disk space will be used. 171s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 171s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 172s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 172s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 172s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 172s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 172s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 172s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 172s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 172s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 173s Fetched 4613 kB in 1s (5618 kB/s) 173s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 173s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 173s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 174s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 174s udisks2 depends on libglib2.0-0 (>= 2.77.0). 174s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 174s python3-gi depends on libglib2.0-0 (>= 2.77.0). 174s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 174s netplan.io depends on libglib2.0-0 (>= 2.70.0). 174s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 174s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 174s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 174s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 174s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 174s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 174s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 174s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 174s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 174s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 174s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 174s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 174s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 174s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 174s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 174s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 174s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 174s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 174s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 174s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 174s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 174s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 174s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 174s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 174s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 174s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 174s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 174s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 174s fwupd depends on libglib2.0-0 (>= 2.79.0). 174s bolt depends on libglib2.0-0 (>= 2.56.0). 174s 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 174s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 174s Selecting previously unselected package libglib2.0-0t64:arm64. 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74733 files and directories currently installed.) 174s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 174s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 174s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 174s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 174s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 174s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 175s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 175s wget depends on libssl3 (>= 3.0.0). 175s u-boot-tools depends on libssl3 (>= 3.0.0). 175s tnftp depends on libssl3 (>= 3.0.0). 175s tcpdump depends on libssl3 (>= 3.0.0). 175s systemd-resolved depends on libssl3 (>= 3.0.0). 175s systemd depends on libssl3 (>= 3.0.0). 175s sudo depends on libssl3 (>= 3.0.0). 175s sbsigntool depends on libssl3 (>= 3.0.0). 175s rsync depends on libssl3 (>= 3.0.0). 175s python3-cryptography depends on libssl3 (>= 3.0.0). 175s openssh-server depends on libssl3 (>= 3.0.10). 175s openssh-client depends on libssl3 (>= 3.0.10). 175s mtd-utils depends on libssl3 (>= 3.0.0). 175s mokutil depends on libssl3 (>= 3.0.0). 175s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 175s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 175s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 175s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 175s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 175s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 175s libnvme1 depends on libssl3 (>= 3.0.0). 175s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 175s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 175s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 175s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 175s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 175s kmod depends on libssl3 (>= 3.0.0). 175s dhcpcd-base depends on libssl3 (>= 3.0.0). 175s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 175s 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 175s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 175s Selecting previously unselected package libssl3t64:arm64. 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 175s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 175s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 175s Preparing to unpack .../1-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 175s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 175s Preparing to unpack .../2-libtirpc-common_1.3.4+ds-1.1_all.deb ... 175s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 176s Preparing to unpack .../3-readline-common_8.2-3.1_all.deb ... 176s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 176s Preparing to unpack .../4-ubuntu-minimal_1.536_arm64.deb ... 176s Unpacking ubuntu-minimal (1.536) over (1.535) ... 176s Selecting previously unselected package xdg-user-dirs. 177s Preparing to unpack .../5-xdg-user-dirs_0.18-1_arm64.deb ... 177s Unpacking xdg-user-dirs (0.18-1) ... 177s Preparing to unpack .../6-ubuntu-standard_1.536_arm64.deb ... 177s Unpacking ubuntu-standard (1.536) over (1.535) ... 177s Setting up ubuntu-minimal (1.536) ... 177s Setting up xdg-user-dirs (0.18-1) ... 177s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 177s Setting up libtirpc-common (1.3.4+ds-1.1) ... 177s Setting up ubuntu-standard (1.536) ... 177s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 177s No schema files found: doing nothing. 177s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 177s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 177s Setting up openssl (3.0.13-0ubuntu1) ... 177s Setting up readline-common (8.2-3.1) ... 177s Processing triggers for man-db (2.12.0-3) ... 179s Processing triggers for install-info (7.1-3) ... 179s Processing triggers for libc-bin (2.39-0ubuntu2) ... 180s Reading package lists... 180s Building dependency tree... 180s Reading state information... 180s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 182s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 182s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 182s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 182s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 185s Reading package lists... 185s Reading package lists... 185s Building dependency tree... 185s Reading state information... 185s Calculating upgrade... 186s The following packages have been kept back: 186s curl 186s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 186s Reading package lists... 186s Building dependency tree... 186s Reading state information... 187s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 192s autopkgtest [17:27:01]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 192s autopkgtest [17:27:01]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-bladderbatch 195s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-bladderbatch 1.40.0-1 (dsc) [2155 B] 195s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-bladderbatch 1.40.0-1 (tar) [9644 kB] 195s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-bladderbatch 1.40.0-1 (diff) [4936 B] 195s gpgv: Signature made Thu Nov 30 06:59:00 2023 UTC 195s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 195s gpgv: issuer "tille@debian.org" 195s gpgv: Can't check signature: No public key 195s dpkg-source: warning: cannot verify inline signature for ./r-bioc-bladderbatch_1.40.0-1.dsc: no acceptable signature found 196s autopkgtest [17:27:05]: testing package r-bioc-bladderbatch version 1.40.0-1 197s autopkgtest [17:27:06]: build not needed 198s autopkgtest [17:27:07]: test pkg-r-autopkgtest: preparing testbed 211s Reading package lists... 211s Building dependency tree... 211s Reading state information... 212s Starting pkgProblemResolver with broken count: 0 212s Starting 2 pkgProblemResolver with broken count: 0 212s Done 213s The following additional packages will be installed: 213s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 213s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 213s fonts-dejavu-mono g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu 213s gcc gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran 213s gfortran-13 gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu 213s icu-devtools libasan8 libatomic1 libblas-dev libblas3 libbz2-dev 213s libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 213s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 213s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 213s libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 213s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblerc4 213s liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 213s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 213s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 213s libpng-dev libpng16-16t64 libpsl5t64 libreadline-dev libreadline8t64 213s libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 213s libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 213s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 213s linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 213s r-base-dev r-bioc-biobase r-bioc-biocgenerics r-bioc-bladderbatch 213s rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev 213s Suggested packages: 213s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 213s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 213s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 213s liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc 213s libstdc++-13-doc tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib 213s r-base-html texlive-base texlive-latex-base texlive-plain-generic 213s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 213s texlive-latex-recommended texlive-latex-extra texinfo r-bioc-all 213s r-cran-runit r-bioc-biocstyle r-cran-knitr r-bioc-s4vectors r-bioc-iranges 213s r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools 213s r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate 213s Recommended packages: 213s bzip2-doc manpages manpages-dev libc-devtools libpng-tools r-recommended 213s r-doc-html libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 213s x11-utils x11-xserver-utils 213s The following packages will be REMOVED: 213s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 213s The following NEW packages will be installed: 213s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 213s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 213s fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-aarch64-linux-gnu 213s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 213s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 213s gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev 213s libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 213s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 213s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 213s libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev 213s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev 213s liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 213s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 213s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 213s libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpsl5t64 213s libreadline-dev libreadline8t64 libsharpyuv0 libsm6 libstdc++-13-dev 213s libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 213s libtsan2 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 213s libxss1 libxt6t64 linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf 213s pkgconf-bin r-base-core r-base-dev r-bioc-biobase r-bioc-biocgenerics 213s r-bioc-bladderbatch rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev 213s The following packages will be upgraded: 213s curl 213s 1 upgraded, 114 newly installed, 5 to remove and 0 not upgraded. 213s Need to get 143 MB/143 MB of archives. 213s After this operation, 433 MB of additional disk space will be used. 213s Get:1 /tmp/autopkgtest.OUf3kK/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [720 B] 213s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 214s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 214s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 214s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 214s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 214s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 214s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 214s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 214s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 214s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 214s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 214s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 214s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 214s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 214s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 214s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 214s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 214s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 214s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 214s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 214s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 214s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 214s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 214s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 214s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 214s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 214s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 214s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 214s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 215s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 215s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 215s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 215s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 215s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 215s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 215s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 215s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 215s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 215s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 215s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 215s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 215s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 215s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 215s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 215s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 215s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 216s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 216s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 216s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 216s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 216s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 216s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 216s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 216s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 216s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 216s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 216s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 216s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 216s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 216s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 216s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 216s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 216s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 216s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 216s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 216s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 216s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 216s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 216s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 216s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 216s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 216s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 216s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 216s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 217s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 217s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 217s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 217s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 217s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 217s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 217s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 217s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 217s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 217s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 217s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 217s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 217s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 217s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 217s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 217s Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 217s Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 217s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 217s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 217s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 217s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 217s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 217s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 217s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 217s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 217s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 217s Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 217s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 217s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 217s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 217s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 217s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 217s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 217s Get:109 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 218s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 218s Get:111 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 218s Get:112 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 218s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 218s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 218s Get:115 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-bladderbatch all 1.40.0-1 [9649 kB] 220s Preconfiguring packages ... 220s Fetched 143 MB in 6s (25.4 MB/s) 220s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 220s wget depends on libpsl5 (>= 0.16.0). 220s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 220s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 220s 220s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74774 files and directories currently installed.) 220s Removing libpsl5:arm64 (0.21.2-1build1) ... 221s Selecting previously unselected package libpsl5t64:arm64. 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74769 files and directories currently installed.) 221s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 221s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 221s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 221s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74775 files and directories currently installed.) 221s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 221s Selecting previously unselected package libcurl4t64:arm64. 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74770 files and directories currently installed.) 221s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 221s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 222s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 222s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 222s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 222s 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74776 files and directories currently installed.) 222s Removing libpng16-16:arm64 (1.6.43-1) ... 222s Selecting previously unselected package libpng16-16t64:arm64. 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 222s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 222s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 222s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 222s parted depends on libreadline8 (>= 6.0). 222s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 222s gpgsm depends on libreadline8 (>= 6.0). 222s gpgconf depends on libreadline8 (>= 6.0). 222s gpg depends on libreadline8 (>= 6.0). 222s gawk depends on libreadline8 (>= 6.0). 222s fdisk depends on libreadline8 (>= 6.0). 222s 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74777 files and directories currently installed.) 222s Removing libreadline8:arm64 (8.2-3) ... 222s Selecting previously unselected package libreadline8t64:arm64. 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74765 files and directories currently installed.) 222s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 222s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 222s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 222s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 222s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 222s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 223s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 223s lsof depends on libtirpc3 (>= 1.0.2). 223s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 223s libnss-nisplus:arm64 depends on libtirpc3 (>= 1.0.2). 223s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 223s iproute2 depends on libtirpc3 (>= 1.0.2). 223s 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74785 files and directories currently installed.) 223s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 223s Selecting previously unselected package libtirpc3t64:arm64. 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74779 files and directories currently installed.) 223s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 223s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 223s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 223s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 223s Selecting previously unselected package libc-dev-bin. 223s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 223s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 223s Selecting previously unselected package linux-libc-dev:arm64. 223s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 223s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 223s Selecting previously unselected package libcrypt-dev:arm64. 224s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 224s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 224s Selecting previously unselected package libtirpc-dev:arm64. 224s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 224s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 224s Selecting previously unselected package libnsl-dev:arm64. 224s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 224s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 224s Selecting previously unselected package rpcsvc-proto. 224s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 224s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 224s Selecting previously unselected package libc6-dev:arm64. 224s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 224s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 224s Selecting previously unselected package libisl23:arm64. 224s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 224s Unpacking libisl23:arm64 (0.26-3) ... 224s Selecting previously unselected package libmpc3:arm64. 224s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 224s Unpacking libmpc3:arm64 (1.3.1-1) ... 224s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 224s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 224s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 224s Selecting previously unselected package cpp-13. 224s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 224s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 224s Selecting previously unselected package cpp-aarch64-linux-gnu. 224s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 224s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 224s Selecting previously unselected package cpp. 225s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 225s Unpacking cpp (4:13.2.0-7ubuntu1) ... 225s Selecting previously unselected package libcc1-0:arm64. 225s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 225s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 225s Selecting previously unselected package libgomp1:arm64. 225s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 225s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 225s Selecting previously unselected package libitm1:arm64. 225s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 225s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 225s Selecting previously unselected package libatomic1:arm64. 225s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 225s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 225s Selecting previously unselected package libasan8:arm64. 225s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 225s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 225s Selecting previously unselected package liblsan0:arm64. 225s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 225s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 225s Selecting previously unselected package libtsan2:arm64. 225s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 225s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 226s Selecting previously unselected package libubsan1:arm64. 226s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 226s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 226s Selecting previously unselected package libhwasan0:arm64. 226s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 226s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 226s Selecting previously unselected package libgcc-13-dev:arm64. 226s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 226s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 226s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 226s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 226s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 226s Selecting previously unselected package gcc-13. 226s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 226s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 226s Selecting previously unselected package gcc-aarch64-linux-gnu. 226s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 226s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 226s Selecting previously unselected package gcc. 226s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 226s Unpacking gcc (4:13.2.0-7ubuntu1) ... 227s Selecting previously unselected package libstdc++-13-dev:arm64. 227s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 227s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 227s Selecting previously unselected package g++-13-aarch64-linux-gnu. 227s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 227s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 227s Selecting previously unselected package g++-13. 227s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 227s Unpacking g++-13 (13.2.0-17ubuntu2) ... 227s Selecting previously unselected package g++-aarch64-linux-gnu. 227s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 227s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 227s Selecting previously unselected package g++. 227s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 227s Unpacking g++ (4:13.2.0-7ubuntu1) ... 227s Selecting previously unselected package build-essential. 227s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 227s Unpacking build-essential (12.10ubuntu1) ... 227s Selecting previously unselected package dctrl-tools. 227s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 227s Unpacking dctrl-tools (2.24-3build2) ... 227s Selecting previously unselected package fonts-dejavu-mono. 227s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 227s Unpacking fonts-dejavu-mono (2.37-8) ... 227s Selecting previously unselected package fonts-dejavu-core. 228s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 228s Unpacking fonts-dejavu-core (2.37-8) ... 228s Selecting previously unselected package fontconfig-config. 228s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 228s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 228s Selecting previously unselected package libfontconfig1:arm64. 228s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 228s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 228s Selecting previously unselected package fontconfig. 228s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 228s Unpacking fontconfig (2.15.0-1ubuntu1) ... 228s Selecting previously unselected package libgfortran5:arm64. 228s Preparing to unpack .../040-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 228s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 228s Selecting previously unselected package libgfortran-13-dev:arm64. 228s Preparing to unpack .../041-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 228s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 228s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 228s Preparing to unpack .../042-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 228s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 229s Selecting previously unselected package gfortran-13. 229s Preparing to unpack .../043-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 229s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 229s Selecting previously unselected package gfortran-aarch64-linux-gnu. 229s Preparing to unpack .../044-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 229s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 229s Selecting previously unselected package gfortran. 229s Preparing to unpack .../045-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 229s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 229s Selecting previously unselected package icu-devtools. 229s Preparing to unpack .../046-icu-devtools_74.2-1ubuntu1_arm64.deb ... 229s Unpacking icu-devtools (74.2-1ubuntu1) ... 229s Selecting previously unselected package libblas3:arm64. 229s Preparing to unpack .../047-libblas3_3.12.0-3_arm64.deb ... 229s Unpacking libblas3:arm64 (3.12.0-3) ... 229s Selecting previously unselected package libblas-dev:arm64. 229s Preparing to unpack .../048-libblas-dev_3.12.0-3_arm64.deb ... 229s Unpacking libblas-dev:arm64 (3.12.0-3) ... 229s Selecting previously unselected package libbz2-dev:arm64. 229s Preparing to unpack .../049-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 229s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 229s Selecting previously unselected package libpixman-1-0:arm64. 229s Preparing to unpack .../050-libpixman-1-0_0.42.2-1_arm64.deb ... 229s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 229s Selecting previously unselected package libxcb-render0:arm64. 229s Preparing to unpack .../051-libxcb-render0_1.15-1_arm64.deb ... 229s Unpacking libxcb-render0:arm64 (1.15-1) ... 229s Selecting previously unselected package libxcb-shm0:arm64. 229s Preparing to unpack .../052-libxcb-shm0_1.15-1_arm64.deb ... 229s Unpacking libxcb-shm0:arm64 (1.15-1) ... 229s Selecting previously unselected package libxrender1:arm64. 229s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 229s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 229s Selecting previously unselected package libcairo2:arm64. 229s Preparing to unpack .../054-libcairo2_1.18.0-1_arm64.deb ... 229s Unpacking libcairo2:arm64 (1.18.0-1) ... 229s Selecting previously unselected package libdatrie1:arm64. 229s Preparing to unpack .../055-libdatrie1_0.2.13-3_arm64.deb ... 229s Unpacking libdatrie1:arm64 (0.2.13-3) ... 229s Selecting previously unselected package libdeflate0:arm64. 229s Preparing to unpack .../056-libdeflate0_1.19-1_arm64.deb ... 229s Unpacking libdeflate0:arm64 (1.19-1) ... 229s Selecting previously unselected package libgraphite2-3:arm64. 229s Preparing to unpack .../057-libgraphite2-3_1.3.14-2_arm64.deb ... 229s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 229s Selecting previously unselected package libharfbuzz0b:arm64. 229s Preparing to unpack .../058-libharfbuzz0b_8.3.0-2_arm64.deb ... 229s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 229s Selecting previously unselected package x11-common. 229s Preparing to unpack .../059-x11-common_1%3a7.7+23ubuntu2_all.deb ... 229s Unpacking x11-common (1:7.7+23ubuntu2) ... 229s Selecting previously unselected package libice6:arm64. 229s Preparing to unpack .../060-libice6_2%3a1.0.10-1build2_arm64.deb ... 229s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 229s Selecting previously unselected package libicu-dev:arm64. 229s Preparing to unpack .../061-libicu-dev_74.2-1ubuntu1_arm64.deb ... 229s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 230s Selecting previously unselected package libjpeg-turbo8:arm64. 230s Preparing to unpack .../062-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 230s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 230s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 230s Preparing to unpack .../063-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 230s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 230s Selecting previously unselected package libjpeg8:arm64. 230s Preparing to unpack .../064-libjpeg8_8c-2ubuntu11_arm64.deb ... 230s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 230s Selecting previously unselected package libjpeg8-dev:arm64. 230s Preparing to unpack .../065-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 230s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 230s Selecting previously unselected package libjpeg-dev:arm64. 230s Preparing to unpack .../066-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 230s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 230s Selecting previously unselected package liblapack3:arm64. 230s Preparing to unpack .../067-liblapack3_3.12.0-3_arm64.deb ... 230s Unpacking liblapack3:arm64 (3.12.0-3) ... 230s Selecting previously unselected package liblapack-dev:arm64. 230s Preparing to unpack .../068-liblapack-dev_3.12.0-3_arm64.deb ... 230s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 230s Selecting previously unselected package liblerc4:arm64. 230s Preparing to unpack .../069-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 230s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 230s Selecting previously unselected package libncurses-dev:arm64. 230s Preparing to unpack .../070-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 230s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 230s Selecting previously unselected package libthai-data. 230s Preparing to unpack .../071-libthai-data_0.1.29-2_all.deb ... 230s Unpacking libthai-data (0.1.29-2) ... 230s Selecting previously unselected package libthai0:arm64. 230s Preparing to unpack .../072-libthai0_0.1.29-2_arm64.deb ... 230s Unpacking libthai0:arm64 (0.1.29-2) ... 230s Selecting previously unselected package libpango-1.0-0:arm64. 230s Preparing to unpack .../073-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 230s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 230s Selecting previously unselected package libpangoft2-1.0-0:arm64. 230s Preparing to unpack .../074-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 230s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 230s Selecting previously unselected package libpangocairo-1.0-0:arm64. 230s Preparing to unpack .../075-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 230s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 230s Selecting previously unselected package libpaper1:arm64. 230s Preparing to unpack .../076-libpaper1_1.1.29_arm64.deb ... 230s Unpacking libpaper1:arm64 (1.1.29) ... 230s Selecting previously unselected package libpaper-utils. 230s Preparing to unpack .../077-libpaper-utils_1.1.29_arm64.deb ... 230s Unpacking libpaper-utils (1.1.29) ... 231s Selecting previously unselected package libpcre2-16-0:arm64. 231s Preparing to unpack .../078-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 231s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 231s Selecting previously unselected package libpcre2-32-0:arm64. 231s Preparing to unpack .../079-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 231s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 231s Selecting previously unselected package libpcre2-posix3:arm64. 231s Preparing to unpack .../080-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 231s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 231s Selecting previously unselected package libpcre2-dev:arm64. 231s Preparing to unpack .../081-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 231s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 231s Selecting previously unselected package libpkgconf3:arm64. 231s Preparing to unpack .../082-libpkgconf3_1.8.1-2_arm64.deb ... 231s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 231s Selecting previously unselected package zlib1g-dev:arm64. 231s Preparing to unpack .../083-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 231s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 231s Selecting previously unselected package libpng-dev:arm64. 231s Preparing to unpack .../084-libpng-dev_1.6.43-3_arm64.deb ... 231s Unpacking libpng-dev:arm64 (1.6.43-3) ... 231s Selecting previously unselected package libreadline-dev:arm64. 231s Preparing to unpack .../085-libreadline-dev_8.2-3.1_arm64.deb ... 231s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 231s Selecting previously unselected package libsharpyuv0:arm64. 231s Preparing to unpack .../086-libsharpyuv0_1.3.2-0.4_arm64.deb ... 231s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 231s Selecting previously unselected package libsm6:arm64. 231s Preparing to unpack .../087-libsm6_2%3a1.2.3-1build2_arm64.deb ... 231s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 231s Selecting previously unselected package libtcl8.6:arm64. 231s Preparing to unpack .../088-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 231s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 231s Selecting previously unselected package libjbig0:arm64. 231s Preparing to unpack .../089-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 231s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 231s Selecting previously unselected package libwebp7:arm64. 232s Preparing to unpack .../090-libwebp7_1.3.2-0.4_arm64.deb ... 232s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 232s Selecting previously unselected package libtiff6:arm64. 232s Preparing to unpack .../091-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 232s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 232s Selecting previously unselected package libxft2:arm64. 232s Preparing to unpack .../092-libxft2_2.3.6-1_arm64.deb ... 232s Unpacking libxft2:arm64 (2.3.6-1) ... 232s Selecting previously unselected package libxss1:arm64. 232s Preparing to unpack .../093-libxss1_1%3a1.2.3-1build2_arm64.deb ... 232s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 232s Selecting previously unselected package libtk8.6:arm64. 232s Preparing to unpack .../094-libtk8.6_8.6.13-2_arm64.deb ... 232s Unpacking libtk8.6:arm64 (8.6.13-2) ... 232s Selecting previously unselected package libxt6t64:arm64. 232s Preparing to unpack .../095-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 232s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 232s Selecting previously unselected package pkgconf-bin. 232s Preparing to unpack .../096-pkgconf-bin_1.8.1-2_arm64.deb ... 232s Unpacking pkgconf-bin (1.8.1-2) ... 232s Selecting previously unselected package pkgconf:arm64. 232s Preparing to unpack .../097-pkgconf_1.8.1-2_arm64.deb ... 232s Unpacking pkgconf:arm64 (1.8.1-2) ... 232s Selecting previously unselected package pkg-config:arm64. 232s Preparing to unpack .../098-pkg-config_1.8.1-2_arm64.deb ... 232s Unpacking pkg-config:arm64 (1.8.1-2) ... 232s Selecting previously unselected package zip. 232s Preparing to unpack .../099-zip_3.0-13_arm64.deb ... 232s Unpacking zip (3.0-13) ... 232s Selecting previously unselected package unzip. 232s Preparing to unpack .../100-unzip_6.0-28ubuntu3_arm64.deb ... 232s Unpacking unzip (6.0-28ubuntu3) ... 232s Selecting previously unselected package xdg-utils. 232s Preparing to unpack .../101-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 232s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 232s Selecting previously unselected package r-base-core. 232s Preparing to unpack .../102-r-base-core_4.3.3-2build1_arm64.deb ... 232s Unpacking r-base-core (4.3.3-2build1) ... 232s Selecting previously unselected package liblzma-dev:arm64. 232s Preparing to unpack .../103-liblzma-dev_5.4.5-0.3_arm64.deb ... 232s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 232s Selecting previously unselected package r-base-dev. 232s Preparing to unpack .../104-r-base-dev_4.3.3-2build1_all.deb ... 232s Unpacking r-base-dev (4.3.3-2build1) ... 232s Selecting previously unselected package pkg-r-autopkgtest. 232s Preparing to unpack .../105-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 232s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 232s Selecting previously unselected package r-bioc-biocgenerics. 232s Preparing to unpack .../106-r-bioc-biocgenerics_0.48.1-2_all.deb ... 232s Unpacking 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236s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 236s Setting up curl (8.5.0-2ubuntu7) ... 236s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 236s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 236s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 236s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 236s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 236s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 236s Setting up fontconfig (2.15.0-1ubuntu1) ... 238s Regenerating fonts cache... done. 238s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 238s Setting up libxft2:arm64 (2.3.6-1) ... 238s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 238s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 238s Setting up cpp-13 (13.2.0-17ubuntu2) ... 238s Setting up libtk8.6:arm64 (8.6.13-2) ... 238s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 238s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 238s Setting up libreadline-dev:arm64 (8.2-3.1) ... 238s Setting up libcairo2:arm64 (1.18.0-1) ... 238s Setting up libxt6t64:arm64 (1:1.2.1-1.2) ... 238s Setting up gcc-13 (13.2.0-17ubuntu2) ... 238s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 238s Setting up cpp (4:13.2.0-7ubuntu1) ... 238s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 238s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 238s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 238s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 238s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 238s Setting up g++-13 (13.2.0-17ubuntu2) ... 238s Setting up libpng-dev:arm64 (1.6.43-3) ... 238s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 238s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 238s Setting up gcc (4:13.2.0-7ubuntu1) ... 238s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 238s Setting up r-base-core (4.3.3-2build1) ... 238s 238s Creating config file /etc/R/Renviron with new version 238s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 238s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 238s Setting up r-bioc-biocgenerics (0.48.1-2) ... 238s Setting up gfortran (4:13.2.0-7ubuntu1) ... 238s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 238s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 238s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 238s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 238s Setting up r-bioc-biobase (2.62.0-1) ... 238s Setting up g++ (4:13.2.0-7ubuntu1) ... 238s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 238s Setting up build-essential (12.10ubuntu1) ... 238s Setting up r-base-dev (4.3.3-2build1) ... 238s Setting up r-bioc-bladderbatch (1.40.0-1) ... 238s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 238s Setting up autopkgtest-satdep (0) ... 238s Processing triggers for man-db (2.12.0-3) ... 239s Processing triggers for install-info (7.1-3) ... 239s Processing triggers for libc-bin (2.39-0ubuntu2) ... 244s (Reading database ... 80556 files and directories currently installed.) 244s Removing autopkgtest-satdep (0) ... 245s autopkgtest [17:27:54]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 245s autopkgtest [17:27:54]: test pkg-r-autopkgtest: [----------------------- 245s Test: Try to load the R library bladderbatch 245s 245s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 245s Copyright (C) 2024 The R Foundation for Statistical Computing 245s Platform: aarch64-unknown-linux-gnu (64-bit) 245s 245s R is free software and comes with ABSOLUTELY NO WARRANTY. 245s You are welcome to redistribute it under certain conditions. 245s Type 'license()' or 'licence()' for distribution details. 245s 245s R is a collaborative project with many contributors. 245s Type 'contributors()' for more information and 245s 'citation()' on how to cite R or R packages in publications. 245s 245s Type 'demo()' for some demos, 'help()' for on-line help, or 245s 'help.start()' for an HTML browser interface to help. 245s Type 'q()' to quit R. 245s 245s > library('bladderbatch') 245s Loading required package: Biobase 245s Loading required package: BiocGenerics 246s 246s Attaching package: ‘BiocGenerics’ 246s 246s The following objects are masked from ‘package:stats’: 246s 246s IQR, mad, sd, var, xtabs 246s 246s The following objects are masked from ‘package:base’: 246s 246s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 246s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 246s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 246s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 246s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 246s table, tapply, union, unique, unsplit, which.max, which.min 246s 246s Welcome to Bioconductor 246s 246s Vignettes contain introductory material; view with 246s 'browseVignettes()'. To cite Bioconductor, see 246s 'citation("Biobase")', and for packages 'citation("pkgname")'. 246s 246s > 246s > 246s Other tests are currently unsupported! 246s They will be progressively added. 246s autopkgtest [17:27:55]: test pkg-r-autopkgtest: -----------------------] 247s pkg-r-autopkgtest PASS 247s autopkgtest [17:27:56]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 247s autopkgtest [17:27:56]: @@@@@@@@@@@@@@@@@@@@ summary 247s pkg-r-autopkgtest PASS 251s Creating nova instance adt-noble-arm64-r-bioc-bladderbatch-20240316-172349-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...