0s autopkgtest [17:21:54]: starting date and time: 2024-03-16 17:21:54+0000 0s autopkgtest [17:21:54]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:21:54]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.gewixv1j/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-biocfilecache --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-arm64-19.secgroup --name adt-noble-arm64-r-bioc-biocfilecache-20240316-172154-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 190s autopkgtest [17:25:04]: testbed dpkg architecture: arm64 191s autopkgtest [17:25:05]: testbed apt version: 2.7.12 191s autopkgtest [17:25:05]: @@@@@@@@@@@@@@@@@@@@ test bed setup 192s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 193s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 193s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 195s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 195s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 195s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 195s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 195s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 195s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 195s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3995 kB] 196s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 196s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 196s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 205s Fetched 9060 kB in 6s (1596 kB/s) 205s Reading package lists... 212s Reading package lists... 213s Building dependency tree... 213s Reading state information... 215s Calculating upgrade... 216s The following packages will be REMOVED: 216s libglib2.0-0 libssl3 216s The following NEW packages will be installed: 216s libglib2.0-0t64 libssl3t64 xdg-user-dirs 216s The following packages have been kept back: 216s curl 216s The following packages will be upgraded: 216s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 216s 5 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 216s Need to get 4592 kB of archives. 216s After this operation, 211 kB of additional disk space will be used. 216s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 216s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 217s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 217s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 217s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 217s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 217s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 217s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 218s Fetched 4592 kB in 1s (4232 kB/s) 219s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 219s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 219s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 219s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 219s udisks2 depends on libglib2.0-0 (>= 2.77.0). 219s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 219s python3-gi depends on libglib2.0-0 (>= 2.77.0). 219s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 219s netplan.io depends on libglib2.0-0 (>= 2.70.0). 219s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 219s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 219s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 219s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 219s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 219s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 219s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 219s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 219s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 219s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 219s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 219s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 219s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 219s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 219s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 219s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 219s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 219s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 219s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 219s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 219s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 219s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 219s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 219s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 219s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 219s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 219s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 219s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 219s fwupd depends on libglib2.0-0 (>= 2.79.0). 219s bolt depends on libglib2.0-0 (>= 2.56.0). 219s 219s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 219s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 219s Selecting previously unselected package libglib2.0-0t64:arm64. 219s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75825 files and directories currently installed.) 219s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 220s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 220s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 220s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 220s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 220s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 220s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 220s wget depends on libssl3 (>= 3.0.0). 220s u-boot-tools depends on libssl3 (>= 3.0.0). 220s tnftp depends on libssl3 (>= 3.0.0). 220s tcpdump depends on libssl3 (>= 3.0.0). 220s systemd-resolved depends on libssl3 (>= 3.0.0). 220s systemd depends on libssl3 (>= 3.0.0). 220s sudo depends on libssl3 (>= 3.0.0). 220s sbsigntool depends on libssl3 (>= 3.0.0). 220s rsync depends on libssl3 (>= 3.0.0). 220s python3-cryptography depends on libssl3 (>= 3.0.0). 220s openssh-server depends on libssl3 (>= 3.0.10). 220s openssh-client depends on libssl3 (>= 3.0.10). 220s mtd-utils depends on libssl3 (>= 3.0.0). 220s mokutil depends on libssl3 (>= 3.0.0). 220s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 220s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 220s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 220s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 220s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 220s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 220s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 220s libnvme1 depends on libssl3 (>= 3.0.0). 220s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 220s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 220s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 220s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 220s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 220s kmod depends on libssl3 (>= 3.0.0). 220s dhcpcd-base depends on libssl3 (>= 3.0.0). 220s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 220s 220s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 220s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 221s Selecting previously unselected package libssl3t64:arm64. 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75839 files and directories currently installed.) 221s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 221s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 221s Preparing to unpack .../libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 221s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 221s Preparing to unpack .../libtirpc-common_1.3.4+ds-1.1_all.deb ... 221s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 221s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 221s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 221s Selecting previously unselected package xdg-user-dirs. 221s Preparing to unpack .../xdg-user-dirs_0.18-1_arm64.deb ... 221s Unpacking xdg-user-dirs (0.18-1) ... 221s Setting up xdg-user-dirs (0.18-1) ... 221s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 221s Setting up libtirpc-common (1.3.4+ds-1.1) ... 221s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 221s No schema files found: doing nothing. 221s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 221s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 221s Setting up openssl (3.0.13-0ubuntu1) ... 221s Setting up readline-common (8.2-3.1) ... 222s Processing triggers for man-db (2.12.0-3) ... 224s Processing triggers for install-info (7.1-3) ... 224s Processing triggers for libc-bin (2.39-0ubuntu2) ... 225s Reading package lists... 226s Building dependency tree... 226s Reading state information... 227s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 228s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 228s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 228s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 228s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 234s Reading package lists... 235s Reading package lists... 235s Building dependency tree... 235s Reading state information... 237s Calculating upgrade... 239s The following packages have been kept back: 239s curl 239s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 239s Reading package lists... 240s Building dependency tree... 240s Reading state information... 243s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 248s autopkgtest [17:26:02]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 248s autopkgtest [17:26:02]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-biocfilecache 251s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-biocfilecache 2.10.1+dfsg-1 (dsc) [2260 B] 251s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-biocfilecache 2.10.1+dfsg-1 (tar) [43.2 kB] 251s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-biocfilecache 2.10.1+dfsg-1 (diff) [6472 B] 252s gpgv: Signature made Wed Nov 29 15:16:29 2023 UTC 252s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 252s gpgv: issuer "tillea@rki.de" 252s gpgv: Can't check signature: No public key 252s dpkg-source: warning: cannot verify inline signature for ./r-bioc-biocfilecache_2.10.1+dfsg-1.dsc: no acceptable signature found 252s autopkgtest [17:26:06]: testing package r-bioc-biocfilecache version 2.10.1+dfsg-1 254s autopkgtest [17:26:08]: build not needed 256s autopkgtest [17:26:10]: test pkg-r-autopkgtest: preparing testbed 261s Reading package lists... 262s Building dependency tree... 262s Reading state information... 264s Starting pkgProblemResolver with broken count: 0 264s Starting 2 pkgProblemResolver with broken count: 0 264s Done 266s The following additional packages will be installed: 266s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 266s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 266s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 266s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 266s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 266s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 266s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 266s libatomic1 libbibtex-parser-perl libblas-dev libblas3 libboost-dev 266s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 266s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 266s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 266s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 266s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 266s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 266s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 266s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 266s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 266s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 266s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 266s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 266s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 266s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 266s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 266s libreadline8t64 libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 266s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 266s libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 266s libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 266s libzzip-0-13 linux-libc-dev littler node-bootstrap-sass node-html5shiv 266s node-normalize.css pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf 266s pkgconf-bin r-base-core r-base-dev r-bioc-biobase r-bioc-biocfilecache 266s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle 266s r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb 266s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges 266s r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools 266s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 266s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 266s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 266s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio 266s r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli r-cran-codetools 266s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 266s r-cran-dbplyr r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr 266s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap r-cran-filelock 266s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 266s r-cran-futile.options r-cran-generics r-cran-glue r-cran-highr 266s r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib r-cran-jsonlite 266s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lifecycle 266s r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats 266s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgbuild 266s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-praise 266s r-cran-processx r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 266s r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-rematch2 r-cran-restfulr 266s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-rsqlite 266s r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-stringi 266s r-cran-stringr r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidyr 266s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-waldo 266s r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml rpcsvc-proto 266s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 266s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 266s Suggested packages: 266s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 266s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 266s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 266s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 266s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 266s libboost-context1.83-dev libboost-contract1.83-dev 266s libboost-coroutine1.83-dev libboost-date-time1.83-dev 266s libboost-exception1.83-dev libboost-fiber1.83-dev 266s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 266s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 266s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 266s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 266s libboost-numpy1.83-dev libboost-program-options1.83-dev 266s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 266s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 266s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 266s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 266s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 266s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 266s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 266s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 266s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 266s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 266s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 266s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 266s r-bioc-all r-cran-runit r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 266s r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 266s r-bioc-variantannotation r-bioc-shortread r-cran-batchtools 266s r-cran-data.table r-bioc-bsgenome r-bioc-genomicfeatures r-bioc-hdf5array 266s r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats r-cran-r.utils 266s r-bioc-edger r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq r-bioc-keggrest 266s r-bioc-sparsematrixstats r-bioc-limma r-bioc-org.hs.eg.db r-bioc-graph 266s r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-spelling 266s r-cran-rstudioapi r-cran-rmysql r-cran-markdown r-cran-getopt 266s r-cran-formattable r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins 266s r-cran-scales r-cran-survival r-cran-units r-cran-vdiffr r-cran-inline 266s r-cran-rmpi r-cran-rlecuyer r-cran-bench r-cran-here r-cran-hms r-cran-plm 266s r-cran-zoo debhelper ghostscript gv | postscript-viewer perl-tk xpdf 266s | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc 266s wp2latex 266s Recommended packages: 266s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 266s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-downlit 266s r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui r-cran-rsconnect 266s r-cran-testit r-cran-tufte r-cran-xml2 r-cran-webshot r-cran-covr 266s r-cran-ggplot2 r-cran-thematic r-cran-cliapp r-cran-mockery r-cran-whoami 266s r-cran-bench r-cran-decor r-cran-lobstr r-cran-progress r-cran-scales 266s r-cran-spelling r-cran-webutils r-cran-rpostgresql r-cran-gh r-cran-broom 266s r-cran-rmysql r-cran-unitizer r-cran-rsvg r-cran-survival r-cran-cairo 266s r-cran-markdown r-cran-ragg r-cran-jpeg r-cran-png r-cran-readr r-cran-r.rsp 266s r-cran-sf r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl 266s r-cran-tikzdevice r-cran-svglite node-highlight.js r-cran-lintr 266s r-cran-tidyverse r-cran-r.devices r-cran-sodium r-cran-lubridate 266s r-cran-mathjaxr r-cran-mockr r-cran-webfakes r-cran-future r-cran-pingr 266s r-cran-runit r-cran-usethis r-cran-dygraphs r-cran-dbitest r-cran-gert 266s r-cran-hms r-cran-rvest r-cran-data.table r-cran-formattable r-cran-pkgdown 266s r-cran-zeallot r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl 266s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 267s The following packages will be REMOVED: 267s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 267s The following NEW packages will be installed: 267s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 267s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 267s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 267s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 267s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 267s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 267s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 267s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 267s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 267s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 267s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 267s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl 267s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 267s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 267s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 267s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 267s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 267s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 267s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 267s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 267s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 267s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 267s libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpotrace0 libpsl5t64 267s libptexenc1 libreadline-dev libreadline8t64 libsharpyuv0 libsm6 267s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 267s libthai0 libtiff6 libtirpc-dev libtirpc3t64 libtk8.6 libtsan2 libubsan1 267s libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 267s libxrender1 libxss1 libxt6t64 libzzip-0-13 linux-libc-dev littler 267s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 267s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 267s r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio 267s r-bioc-biocparallel r-bioc-biocstyle r-bioc-biostrings r-bioc-delayedarray 267s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 267s r-bioc-genomicranges r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhtslib 267s r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 267s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-xvector 267s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh 267s r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 267s r-cran-bookdown r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr 267s r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon 267s r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-desc r-cran-diffobj 267s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 267s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 267s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 267s r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib 267s r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice 267s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix 267s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 267s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 267s r-cran-plogr r-cran-praise r-cran-processx r-cran-promises r-cran-ps 267s r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl 267s r-cran-rematch2 r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 267s r-cran-rprojroot r-cran-rsqlite r-cran-sass r-cran-shiny r-cran-snow 267s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-sys r-cran-testthat 267s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 267s r-cran-vctrs r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable 267s r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 267s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 267s xdg-utils zip zlib1g-dev 267s The following packages will be upgraded: 267s curl 267s 1 upgraded, 284 newly installed, 5 to remove and 0 not upgraded. 267s Need to get 412 MB/412 MB of archives. 267s After this operation, 1324 MB of additional disk space will be used. 267s Get:1 /tmp/autopkgtest.RrEiKB/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [776 B] 268s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 268s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 268s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 268s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 268s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 268s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 268s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 268s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 268s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 268s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 268s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 268s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 268s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 268s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 269s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 269s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 269s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 269s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 269s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 269s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 269s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 269s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 269s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 269s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 270s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 270s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 270s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 270s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 270s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 270s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 271s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 271s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 271s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 271s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 271s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 272s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 272s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 272s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 272s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 272s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 272s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 272s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 272s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 272s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 272s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 272s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 272s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 272s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 272s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 272s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 272s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 272s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 273s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 273s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 273s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 273s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 273s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 273s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 273s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 273s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 273s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 273s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 273s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 274s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 274s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 274s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 274s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 274s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 274s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 274s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 274s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 274s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 274s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 274s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 274s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 274s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 274s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 274s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 274s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 274s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 274s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 275s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 275s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 275s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 275s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 275s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 275s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 275s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 275s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 275s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 275s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 275s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 275s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 275s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 275s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 275s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 275s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 275s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 275s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 275s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 275s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 275s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 276s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 276s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 276s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 276s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 276s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 276s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 276s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 276s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 276s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 276s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 276s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 276s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 276s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 276s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 276s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 276s Get:119 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 276s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 276s Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 276s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 276s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 276s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 276s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 276s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 276s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 276s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 276s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 276s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 276s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 276s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 276s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 276s Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 276s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 276s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 276s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 276s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 276s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 276s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 276s Get:141 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 276s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 276s Get:143 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 277s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 277s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 277s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 277s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 277s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 277s Get:149 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 277s Get:150 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 279s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 279s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 279s Get:153 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 279s Get:154 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 279s Get:155 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 279s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 279s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 279s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 279s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 279s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 279s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 279s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 279s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 279s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 279s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 279s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 279s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 279s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 279s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 279s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 279s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 279s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 279s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 279s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 279s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 279s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 279s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 279s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 279s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 279s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 279s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 279s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 279s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 280s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 280s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 280s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 280s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 280s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 280s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 280s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 280s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 280s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 280s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 280s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 280s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 280s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 280s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 280s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 280s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 280s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 280s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 280s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 280s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 280s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 280s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 280s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 280s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 280s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 281s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 281s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 281s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 281s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 281s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 281s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 281s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 281s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 281s Get:217 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 282s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 282s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 282s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 282s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 282s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 282s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 282s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 282s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 282s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 282s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 282s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 283s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 283s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 283s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 283s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 283s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 283s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 283s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 283s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 283s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 283s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 283s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 283s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 283s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 283s Get:242 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 283s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 283s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 284s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 284s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 288s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 288s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 289s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 289s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 289s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 289s Get:252 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 289s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 289s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 289s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 290s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 290s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 290s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 290s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 290s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 290s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 290s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 290s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 290s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 290s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 291s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhtslib arm64 2.4.1+dfsg-1 [1357 kB] 291s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rsamtools arm64 2.18.0+dfsg-1 [3629 kB] 291s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicalignments arm64 1.38.2-1 [2133 kB] 291s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 291s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rjson arm64 0.2.21-1 [142 kB] 291s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 291s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rtracklayer arm64 1.62.0-1 [5104 kB] 291s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-brio arm64 1.1.4-1 [37.7 kB] 291s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ps arm64 1.7.6-1 [313 kB] 291s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-processx arm64 3.8.3-1 [345 kB] 291s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-callr all 3.7.3-2 [425 kB] 291s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 291s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB] 291s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgbuild all 1.4.3-1 [209 kB] 291s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rprojroot all 2.0.4-1 [124 kB] 291s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgload all 1.3.4-1 [207 kB] 291s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 291s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 291s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-waldo all 0.5.2-1build1 [120 kB] 291s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-testthat arm64 3.2.1-1 [1678 kB] 294s Preconfiguring packages ... 295s Fetched 412 MB in 24s (17.0 MB/s) 295s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 295s wget depends on libpsl5 (>= 0.16.0). 295s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 295s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 295s 295s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75866 files and directories currently installed.) 295s Removing libpsl5:arm64 (0.21.2-1build1) ... 295s Selecting previously unselected package libpsl5t64:arm64. 295s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75861 files and directories currently installed.) 295s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 295s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 295s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 295s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 295s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75867 files and directories currently installed.) 295s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 296s Selecting previously unselected package libcurl4t64:arm64. 296s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75862 files and directories currently installed.) 296s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 296s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 296s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 296s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 296s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 296s 296s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75868 files and directories currently installed.) 296s Removing libpng16-16:arm64 (1.6.43-1) ... 296s Selecting previously unselected package libpng16-16t64:arm64. 297s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 297s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 297s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 297s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 297s parted depends on libreadline8 (>= 6.0). 297s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 297s libpython3.11-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 297s gpgsm depends on libreadline8 (>= 6.0). 297s gpgconf depends on libreadline8 (>= 6.0). 297s gpg depends on libreadline8 (>= 6.0). 297s gawk depends on libreadline8 (>= 6.0). 297s fdisk depends on libreadline8 (>= 6.0). 297s 297s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75869 files and directories currently installed.) 297s Removing libreadline8:arm64 (8.2-3) ... 297s Selecting previously unselected package libreadline8t64:arm64. 297s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75857 files and directories currently installed.) 297s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 297s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 297s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 297s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 297s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 297s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 297s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 297s lsof depends on libtirpc3 (>= 1.0.2). 297s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 297s libpython3.11-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 297s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 297s iproute2 depends on libtirpc3 (>= 1.0.2). 297s 297s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75877 files and directories currently installed.) 297s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 298s Selecting previously unselected package libtirpc3t64:arm64. 298s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75871 files and directories currently installed.) 298s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 298s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 298s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 298s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 298s Selecting previously unselected package libc-dev-bin. 298s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 298s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 298s Selecting previously unselected package linux-libc-dev:arm64. 298s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 298s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 299s Selecting previously unselected package libcrypt-dev:arm64. 299s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 299s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 299s Selecting previously unselected package libtirpc-dev:arm64. 299s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 299s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 299s Selecting previously unselected package libnsl-dev:arm64. 299s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 299s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 300s Selecting previously unselected package rpcsvc-proto. 300s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 300s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 300s Selecting previously unselected package libc6-dev:arm64. 300s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 300s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 300s Selecting previously unselected package libisl23:arm64. 300s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 300s Unpacking libisl23:arm64 (0.26-3) ... 301s Selecting previously unselected package libmpc3:arm64. 301s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 301s Unpacking libmpc3:arm64 (1.3.1-1) ... 301s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 301s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 301s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 302s Selecting previously unselected package cpp-13. 302s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 302s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 302s Selecting previously unselected package cpp-aarch64-linux-gnu. 302s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 302s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 302s Selecting previously unselected package cpp. 302s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 302s Unpacking cpp (4:13.2.0-7ubuntu1) ... 302s Selecting previously unselected package libcc1-0:arm64. 302s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 302s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 302s Selecting previously unselected package libgomp1:arm64. 302s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 302s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 302s Selecting previously unselected package libitm1:arm64. 302s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 302s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 302s Selecting previously unselected package libatomic1:arm64. 302s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 302s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 302s Selecting previously unselected package libasan8:arm64. 302s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 302s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 303s Selecting previously unselected package liblsan0:arm64. 303s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 303s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 303s Selecting previously unselected package libtsan2:arm64. 303s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 303s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 303s Selecting previously unselected package libubsan1:arm64. 303s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 303s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 303s Selecting previously unselected package libhwasan0:arm64. 304s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 304s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 304s Selecting previously unselected package libgcc-13-dev:arm64. 304s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 304s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 304s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 304s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 304s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 306s Selecting previously unselected package gcc-13. 306s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 306s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 306s Selecting previously unselected package gcc-aarch64-linux-gnu. 306s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 306s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 306s Selecting previously unselected package gcc. 306s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 306s Unpacking gcc (4:13.2.0-7ubuntu1) ... 306s Selecting previously unselected package libstdc++-13-dev:arm64. 306s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 306s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 307s Selecting previously unselected package g++-13-aarch64-linux-gnu. 307s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 307s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 308s Selecting previously unselected package g++-13. 308s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 308s Unpacking g++-13 (13.2.0-17ubuntu2) ... 308s Selecting previously unselected package g++-aarch64-linux-gnu. 309s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 309s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 309s Selecting previously unselected package g++. 309s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 309s Unpacking g++ (4:13.2.0-7ubuntu1) ... 309s Selecting previously unselected package build-essential. 309s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 309s Unpacking build-essential (12.10ubuntu1) ... 309s Selecting previously unselected package dctrl-tools. 309s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 309s Unpacking dctrl-tools (2.24-3build2) ... 309s Selecting previously unselected package fonts-dejavu-mono. 309s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 309s Unpacking fonts-dejavu-mono (2.37-8) ... 309s Selecting previously unselected package fonts-dejavu-core. 309s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 309s Unpacking fonts-dejavu-core (2.37-8) ... 309s Selecting previously unselected package fontconfig-config. 309s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 310s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 310s Selecting previously unselected package libfontconfig1:arm64. 310s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 310s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 310s Selecting previously unselected package fontconfig. 310s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 310s Unpacking fontconfig (2.15.0-1ubuntu1) ... 311s Selecting previously unselected package fonts-font-awesome. 311s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 311s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 311s Selecting previously unselected package fonts-glyphicons-halflings. 311s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 311s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 311s Selecting previously unselected package fonts-lmodern. 311s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 311s Unpacking fonts-lmodern (2.005-1) ... 311s Selecting previously unselected package fonts-mathjax. 311s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 311s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 312s Selecting previously unselected package libgfortran5:arm64. 312s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 312s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 312s Selecting previously unselected package libgfortran-13-dev:arm64. 312s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 312s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 312s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 312s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 312s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 313s Selecting previously unselected package gfortran-13. 313s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 313s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 314s Selecting previously unselected package gfortran-aarch64-linux-gnu. 314s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 314s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 314s Selecting previously unselected package gfortran. 314s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 314s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 314s Selecting previously unselected package icu-devtools. 314s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_arm64.deb ... 314s Unpacking icu-devtools (74.2-1ubuntu1) ... 314s Selecting previously unselected package javascript-common. 314s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 314s Unpacking javascript-common (11+nmu1) ... 314s Selecting previously unselected package libio-string-perl. 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... 329s Unpacking libxcb-shm0:arm64 (1.15-1) ... 329s Selecting previously unselected package libxrender1:arm64. 329s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 329s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 329s Selecting previously unselected package libcairo2:arm64. 329s Preparing to unpack .../064-libcairo2_1.18.0-1_arm64.deb ... 329s Unpacking libcairo2:arm64 (1.18.0-1) ... 329s Selecting previously unselected package libdatrie1:arm64. 329s Preparing to unpack .../065-libdatrie1_0.2.13-3_arm64.deb ... 329s Unpacking libdatrie1:arm64 (0.2.13-3) ... 330s Selecting previously unselected package libdeflate0:arm64. 330s Preparing to unpack .../066-libdeflate0_1.19-1_arm64.deb ... 330s Unpacking libdeflate0:arm64 (1.19-1) ... 330s Selecting previously unselected package libgraphite2-3:arm64. 330s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_arm64.deb ... 330s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 330s Selecting previously unselected package libharfbuzz0b:arm64. 330s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_arm64.deb ... 330s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 330s Selecting previously unselected package x11-common. 330s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 330s Unpacking x11-common (1:7.7+23ubuntu2) ... 330s Selecting previously unselected package libice6:arm64. 330s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_arm64.deb ... 330s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 330s Selecting previously unselected package libicu-dev:arm64. 330s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_arm64.deb ... 330s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 332s Selecting previously unselected package libjpeg-turbo8:arm64. 332s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 332s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 332s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 332s Preparing to unpack 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package libjs-jquery-datatables. 334s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 334s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 334s Selecting previously unselected package libjs-sifter.js. 334s Preparing to unpack .../085-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 334s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 335s Selecting previously unselected package libjs-microplugin.js. 335s Preparing to unpack .../086-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 335s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 335s Selecting previously unselected package libjs-jquery-selectize.js. 335s Preparing to unpack .../087-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 335s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 335s Selecting previously unselected package libjs-jquery-ui. 335s Preparing to unpack .../088-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 335s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 335s Selecting previously unselected package libjs-json. 335s Preparing to unpack .../089-libjs-json_0~20221030+~1.0.8-1_all.deb ... 335s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 335s Selecting previously unselected package libjs-lunr. 335s Preparing to unpack .../090-libjs-lunr_2.3.9~dfsg-2_all.deb ... 335s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 336s Selecting previously unselected package libjs-prettify. 336s Preparing to unpack .../091-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 336s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 336s Selecting previously unselected package libkpathsea6:arm64. 336s Preparing to unpack .../092-libkpathsea6_2023.20230311.66589-9_arm64.deb ... 336s Unpacking libkpathsea6:arm64 (2023.20230311.66589-9) ... 336s Selecting previously unselected package liblapack3:arm64. 336s Preparing to unpack .../093-liblapack3_3.12.0-3_arm64.deb ... 336s Unpacking liblapack3:arm64 (3.12.0-3) ... 336s Selecting previously unselected package liblapack-dev:arm64. 337s Preparing to unpack .../094-liblapack-dev_3.12.0-3_arm64.deb ... 337s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 337s Selecting previously unselected package liblerc4:arm64. 337s Preparing to unpack .../095-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 337s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 338s Selecting previously unselected package liblua5.4-0:arm64. 338s Preparing to unpack .../096-liblua5.4-0_5.4.6-3_arm64.deb ... 338s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 338s Selecting previously unselected package libncurses-dev:arm64. 338s Preparing to unpack .../097-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 338s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 338s Selecting previously unselected package libthai-data. 338s Preparing to unpack .../098-libthai-data_0.1.29-2_all.deb ... 338s Unpacking libthai-data (0.1.29-2) ... 338s Selecting previously unselected package libthai0:arm64. 338s Preparing to unpack .../099-libthai0_0.1.29-2_arm64.deb ... 338s Unpacking libthai0:arm64 (0.1.29-2) ... 338s Selecting previously unselected package libpango-1.0-0:arm64. 338s Preparing to unpack .../100-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 338s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 338s Selecting previously unselected package libpangoft2-1.0-0:arm64. 338s Preparing to unpack .../101-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 338s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 338s Selecting previously unselected package libpangocairo-1.0-0:arm64. 338s Preparing to unpack .../102-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 338s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 339s Selecting previously unselected package libpaper1:arm64. 339s Preparing to unpack .../103-libpaper1_1.1.29_arm64.deb ... 339s Unpacking libpaper1:arm64 (1.1.29) ... 339s Selecting previously unselected package libpaper-utils. 339s Preparing to unpack .../104-libpaper-utils_1.1.29_arm64.deb ... 339s Unpacking libpaper-utils (1.1.29) ... 339s 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unselected package zlib1g-dev:arm64. 340s Preparing to unpack .../110-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 340s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 340s Selecting previously unselected package libpng-dev:arm64. 340s Preparing to unpack .../111-libpng-dev_1.6.43-3_arm64.deb ... 340s Unpacking libpng-dev:arm64 (1.6.43-3) ... 340s Selecting previously unselected package libpotrace0:arm64. 340s Preparing to unpack .../112-libpotrace0_1.16-2_arm64.deb ... 340s Unpacking libpotrace0:arm64 (1.16-2) ... 340s Selecting previously unselected package libptexenc1:arm64. 340s Preparing to unpack .../113-libptexenc1_2023.20230311.66589-9_arm64.deb ... 340s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 340s Selecting previously unselected package libreadline-dev:arm64. 340s Preparing to unpack .../114-libreadline-dev_8.2-3.1_arm64.deb ... 340s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 340s Selecting previously unselected package libsharpyuv0:arm64. 340s 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libxss1:arm64 (1:1.2.3-1build2) ... 343s Selecting previously unselected package libtk8.6:arm64. 343s Preparing to unpack .../126-libtk8.6_8.6.13-2_arm64.deb ... 343s Unpacking libtk8.6:arm64 (8.6.13-2) ... 343s Selecting previously unselected package libxt6t64:arm64. 343s Preparing to unpack .../127-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 343s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 343s Selecting previously unselected package libxmu6:arm64. 343s Preparing to unpack .../128-libxmu6_2%3a1.1.3-3_arm64.deb ... 343s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 343s Selecting previously unselected package libxpm4:arm64. 343s Preparing to unpack .../129-libxpm4_1%3a3.5.17-1_arm64.deb ... 343s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 343s Selecting previously unselected package libxaw7:arm64. 343s Preparing to unpack .../130-libxaw7_2%3a1.0.14-1_arm64.deb ... 343s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 343s Selecting previously unselected package libxi6:arm64. 343s Preparing to unpack .../131-libxi6_2%3a1.8.1-1_arm64.deb ... 343s Unpacking libxi6:arm64 (2:1.8.1-1) ... 343s Selecting previously unselected package libzzip-0-13:arm64. 344s Preparing to unpack .../132-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 344s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 344s Selecting previously unselected package zip. 344s Preparing to unpack .../133-zip_3.0-13_arm64.deb ... 344s Unpacking zip (3.0-13) ... 344s Selecting previously unselected package unzip. 344s Preparing to unpack .../134-unzip_6.0-28ubuntu3_arm64.deb ... 344s Unpacking unzip (6.0-28ubuntu3) ... 344s Selecting previously unselected package xdg-utils. 344s Preparing to unpack .../135-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 344s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 344s Selecting previously unselected package r-base-core. 344s Preparing to unpack .../136-r-base-core_4.3.3-2build1_arm64.deb ... 344s Unpacking r-base-core (4.3.3-2build1) ... 346s Selecting previously unselected package r-cran-littler. 346s Preparing to unpack .../137-r-cran-littler_0.3.19-1_arm64.deb ... 346s Unpacking r-cran-littler (0.3.19-1) ... 346s Selecting previously unselected package littler. 346s Preparing to unpack .../138-littler_0.3.19-1_all.deb ... 346s Unpacking littler (0.3.19-1) ... 346s Selecting previously unselected package node-bootstrap-sass. 346s Preparing to unpack .../139-node-bootstrap-sass_3.4.3-2_all.deb ... 346s Unpacking node-bootstrap-sass (3.4.3-2) ... 347s Selecting previously unselected package node-html5shiv. 347s Preparing to unpack .../140-node-html5shiv_3.7.3+dfsg-5_all.deb ... 347s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 347s Selecting previously unselected package node-normalize.css. 347s Preparing to unpack .../141-node-normalize.css_8.0.1-5_all.deb ... 347s Unpacking node-normalize.css (8.0.1-5) ... 347s Selecting previously unselected package pandoc-data. 347s Preparing to unpack .../142-pandoc-data_3.1.3-1_all.deb ... 347s Unpacking pandoc-data (3.1.3-1) ... 347s Selecting previously unselected package pandoc. 347s Preparing to unpack .../143-pandoc_3.1.3+ds-2_arm64.deb ... 347s Unpacking pandoc (3.1.3+ds-2) ... 351s Selecting previously unselected package pkgconf-bin. 352s Preparing to unpack .../144-pkgconf-bin_1.8.1-2_arm64.deb ... 352s Unpacking pkgconf-bin (1.8.1-2) ... 352s Selecting previously unselected package pkgconf:arm64. 352s Preparing to unpack .../145-pkgconf_1.8.1-2_arm64.deb ... 352s Unpacking pkgconf:arm64 (1.8.1-2) ... 352s Selecting previously unselected package pkg-config:arm64. 352s Preparing to unpack .../146-pkg-config_1.8.1-2_arm64.deb ... 352s Unpacking pkg-config:arm64 (1.8.1-2) ... 352s Selecting previously unselected package liblzma-dev:arm64. 352s Preparing to unpack .../147-liblzma-dev_5.4.5-0.3_arm64.deb ... 352s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 352s Selecting previously unselected package r-base-dev. 352s Preparing to unpack .../148-r-base-dev_4.3.3-2build1_all.deb ... 352s Unpacking r-base-dev (4.3.3-2build1) ... 352s Selecting previously unselected package pkg-r-autopkgtest. 352s Preparing to unpack .../149-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 352s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 352s Selecting previously unselected package r-bioc-biocgenerics. 352s Preparing to unpack .../150-r-bioc-biocgenerics_0.48.1-2_all.deb ... 352s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 352s Selecting previously unselected package r-bioc-biobase. 352s Preparing to unpack .../151-r-bioc-biobase_2.62.0-1_arm64.deb ... 352s Unpacking r-bioc-biobase (2.62.0-1) ... 353s Selecting previously unselected package r-cran-rlang. 353s Preparing to unpack .../152-r-cran-rlang_1.1.3-1_arm64.deb ... 353s Unpacking r-cran-rlang (1.1.3-1) ... 353s Selecting previously unselected package r-cran-cli. 353s Preparing to unpack .../153-r-cran-cli_3.6.2-1_arm64.deb ... 353s Unpacking r-cran-cli (3.6.2-1) ... 353s Selecting previously unselected package r-cran-glue. 353s Preparing to unpack .../154-r-cran-glue_1.7.0-1_arm64.deb ... 353s Unpacking r-cran-glue (1.7.0-1) ... 353s Selecting previously unselected package r-cran-lifecycle. 354s Preparing to unpack .../155-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 354s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 354s Selecting previously unselected package r-cran-vctrs. 354s Preparing to unpack .../156-r-cran-vctrs_0.6.5-1_arm64.deb ... 354s Unpacking r-cran-vctrs (0.6.5-1) ... 354s Selecting previously unselected package r-cran-blob. 354s Preparing to unpack .../157-r-cran-blob_1.2.4-1_all.deb ... 354s Unpacking r-cran-blob (1.2.4-1) ... 354s Selecting previously unselected package r-cran-dbi. 354s Preparing to unpack .../158-r-cran-dbi_1.2.2-1_all.deb ... 354s Unpacking r-cran-dbi (1.2.2-1) ... 354s Selecting previously unselected package r-cran-generics. 355s Preparing to unpack .../159-r-cran-generics_0.1.3-1_all.deb ... 355s Unpacking r-cran-generics (0.1.3-1) ... 355s Selecting previously unselected package r-cran-magrittr. 355s Preparing to unpack .../160-r-cran-magrittr_2.0.3-1_arm64.deb ... 355s Unpacking r-cran-magrittr (2.0.3-1) ... 355s Selecting previously unselected package r-cran-fansi. 355s Preparing to unpack .../161-r-cran-fansi_1.0.5-1_arm64.deb ... 355s Unpacking r-cran-fansi (1.0.5-1) ... 355s Selecting previously unselected package r-cran-utf8. 355s Preparing to unpack .../162-r-cran-utf8_1.2.4-1_arm64.deb ... 355s Unpacking r-cran-utf8 (1.2.4-1) ... 356s Selecting previously unselected package r-cran-pillar. 356s Preparing to unpack .../163-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 356s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 357s Selecting previously unselected package r-cran-r6. 357s Preparing to unpack .../164-r-cran-r6_2.5.1-1_all.deb ... 357s Unpacking r-cran-r6 (2.5.1-1) ... 357s Selecting previously unselected package r-cran-pkgconfig. 357s Preparing to unpack .../165-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 357s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 357s Selecting previously unselected package r-cran-tibble. 357s Preparing to unpack .../166-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 357s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 357s Selecting previously unselected package r-cran-withr. 357s Preparing to unpack .../167-r-cran-withr_2.5.0-1_all.deb ... 357s Unpacking r-cran-withr (2.5.0-1) ... 358s Selecting previously unselected package r-cran-tidyselect. 358s Preparing to unpack .../168-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 358s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 358s Selecting previously unselected package r-cran-dplyr. 358s Preparing to unpack .../169-r-cran-dplyr_1.1.4-1_arm64.deb ... 358s Unpacking r-cran-dplyr (1.1.4-1) ... 358s Selecting previously unselected package r-cran-purrr. 358s Preparing to unpack .../170-r-cran-purrr_1.0.2-1_arm64.deb ... 358s Unpacking r-cran-purrr (1.0.2-1) ... 358s Selecting previously unselected package r-cran-stringi. 358s Preparing to unpack .../171-r-cran-stringi_1.8.3-1_arm64.deb ... 358s Unpacking r-cran-stringi (1.8.3-1) ... 359s Selecting previously unselected package r-cran-stringr. 359s Preparing to unpack .../172-r-cran-stringr_1.5.1-1_all.deb ... 359s Unpacking r-cran-stringr (1.5.1-1) ... 359s Selecting previously unselected package r-cran-cpp11. 359s Preparing to unpack .../173-r-cran-cpp11_0.4.7-1_all.deb ... 359s Unpacking r-cran-cpp11 (0.4.7-1) ... 359s Selecting previously unselected package r-cran-tidyr. 359s Preparing to unpack .../174-r-cran-tidyr_1.3.1-1_arm64.deb ... 359s Unpacking r-cran-tidyr (1.3.1-1) ... 359s Selecting previously unselected package r-cran-dbplyr. 359s Preparing to unpack .../175-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 359s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 359s Selecting previously unselected package r-cran-bit. 360s Preparing to unpack .../176-r-cran-bit_4.0.5-1_arm64.deb ... 360s Unpacking r-cran-bit (4.0.5-1) ... 360s Selecting previously unselected package r-cran-bit64. 360s Preparing to unpack .../177-r-cran-bit64_4.0.5-1_arm64.deb ... 360s Unpacking r-cran-bit64 (4.0.5-1) ... 360s Selecting previously unselected package r-cran-fastmap. 360s Preparing to unpack .../178-r-cran-fastmap_1.1.1-1_arm64.deb ... 360s Unpacking r-cran-fastmap (1.1.1-1) ... 360s Selecting previously unselected package r-cran-cachem. 360s Preparing to unpack .../179-r-cran-cachem_1.0.8-1_arm64.deb ... 360s Unpacking r-cran-cachem (1.0.8-1) ... 360s Selecting previously unselected package r-cran-memoise. 360s Preparing to unpack .../180-r-cran-memoise_2.0.1-1_all.deb ... 360s Unpacking r-cran-memoise (2.0.1-1) ... 360s Selecting previously unselected package r-cran-plogr. 360s Preparing to unpack .../181-r-cran-plogr_0.2.0-3build1_all.deb ... 360s Unpacking r-cran-plogr (0.2.0-3build1) ... 361s Selecting previously unselected package r-cran-rsqlite. 361s Preparing to unpack .../182-r-cran-rsqlite_2.3.4-1_arm64.deb ... 361s Unpacking r-cran-rsqlite (2.3.4-1) ... 361s Selecting previously unselected package r-cran-filelock. 361s Preparing to unpack .../183-r-cran-filelock_1.0.3-1_arm64.deb ... 361s Unpacking r-cran-filelock (1.0.3-1) ... 361s Selecting previously unselected package r-cran-curl. 361s Preparing to unpack .../184-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 361s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 361s Selecting previously unselected package r-cran-jsonlite. 361s Preparing to unpack .../185-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 361s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 362s Selecting previously unselected package r-cran-mime. 362s Preparing to unpack .../186-r-cran-mime_0.12-1_arm64.deb ... 362s Unpacking r-cran-mime (0.12-1) ... 362s Selecting previously unselected package r-cran-sys. 362s Preparing to unpack .../187-r-cran-sys_3.4.2-1_arm64.deb ... 362s Unpacking r-cran-sys (3.4.2-1) ... 362s Selecting previously unselected package r-cran-askpass. 362s Preparing to unpack .../188-r-cran-askpass_1.2.0-1_arm64.deb ... 362s Unpacking r-cran-askpass (1.2.0-1) ... 362s Selecting previously unselected package r-cran-openssl. 362s Preparing to unpack .../189-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 362s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 362s Selecting previously unselected package r-cran-httr. 362s Preparing to unpack .../190-r-cran-httr_1.4.7+dfsg-1_all.deb ... 362s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 363s Selecting previously unselected package r-bioc-biocfilecache. 363s Preparing to unpack .../191-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 363s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 363s Selecting previously unselected package r-bioc-s4vectors. 363s Preparing to unpack .../192-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 363s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 363s Selecting previously unselected package r-bioc-biocio. 363s Preparing to unpack .../193-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 363s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 363s Selecting previously unselected package r-cran-formatr. 363s Preparing to unpack .../194-r-cran-formatr_1.14-1_all.deb ... 363s Unpacking r-cran-formatr (1.14-1) ... 364s Selecting previously unselected package r-cran-lambda.r. 364s Preparing to unpack .../195-r-cran-lambda.r_1.2.4-2build1_all.deb ... 364s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 364s Selecting previously unselected package r-cran-futile.options. 364s Preparing to unpack .../196-r-cran-futile.options_1.0.1-3build1_all.deb ... 364s Unpacking r-cran-futile.options (1.0.1-3build1) ... 364s Selecting previously unselected package r-cran-futile.logger. 364s Preparing to unpack .../197-r-cran-futile.logger_1.4.3-4build1_all.deb ... 364s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 364s Selecting previously unselected package r-cran-snow. 364s Preparing to unpack .../198-r-cran-snow_1%3a0.4.4-2_all.deb ... 364s Unpacking r-cran-snow (1:0.4.4-2) ... 364s Selecting previously unselected package r-cran-codetools. 364s Preparing to unpack .../199-r-cran-codetools_0.2-19-1_all.deb ... 364s Unpacking r-cran-codetools (0.2-19-1) ... 364s Selecting previously unselected package r-cran-bh. 365s Preparing to unpack .../200-r-cran-bh_1.84.0-1_all.deb ... 365s Unpacking r-cran-bh (1.84.0-1) ... 365s Selecting previously unselected package r-bioc-biocparallel. 365s Preparing to unpack .../201-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 365s Unpacking r-bioc-biocparallel (1.36.0-1) ... 365s Selecting previously unselected package r-cran-base64enc. 365s Preparing to unpack .../202-r-cran-base64enc_0.1-3-3_arm64.deb ... 365s Unpacking r-cran-base64enc (0.1-3-3) ... 365s Selecting previously unselected package r-cran-digest. 365s Preparing to unpack .../203-r-cran-digest_0.6.34-1_arm64.deb ... 365s Unpacking r-cran-digest (0.6.34-1) ... 365s Selecting previously unselected package r-cran-ellipsis. 365s Preparing to unpack .../204-r-cran-ellipsis_0.3.2-2_arm64.deb ... 365s Unpacking r-cran-ellipsis (0.3.2-2) ... 366s Selecting previously unselected package r-cran-htmltools. 366s Preparing to unpack .../205-r-cran-htmltools_0.5.7-1_arm64.deb ... 366s Unpacking r-cran-htmltools (0.5.7-1) ... 366s Selecting previously unselected package r-cran-evaluate. 366s Preparing to unpack .../206-r-cran-evaluate_0.23-1_all.deb ... 366s Unpacking r-cran-evaluate (0.23-1) ... 367s Selecting previously unselected package r-cran-xfun. 367s Preparing to unpack .../207-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 367s Unpacking r-cran-xfun (0.41+dfsg-1) ... 367s Selecting previously unselected package r-cran-highr. 367s Preparing to unpack .../208-r-cran-highr_0.10+dfsg-1_all.deb ... 367s Unpacking r-cran-highr (0.10+dfsg-1) ... 368s Selecting previously unselected package r-cran-yaml. 368s Preparing to unpack .../209-r-cran-yaml_2.3.8-1_arm64.deb ... 368s Unpacking r-cran-yaml (2.3.8-1) ... 368s Selecting previously unselected package libjs-mathjax. 368s Preparing to unpack .../210-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 368s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 376s Selecting previously unselected package r-cran-knitr. 376s Preparing to unpack .../211-r-cran-knitr_1.45+dfsg-1_all.deb ... 376s Unpacking r-cran-knitr (1.45+dfsg-1) ... 377s Selecting previously unselected package r-cran-jquerylib. 377s Preparing to unpack .../212-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 377s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 377s Selecting previously unselected package r-cran-fs. 377s Preparing to unpack .../213-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 377s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 377s Selecting previously unselected package r-cran-rappdirs. 377s Preparing to unpack .../214-r-cran-rappdirs_0.3.3-1_arm64.deb ... 377s Unpacking r-cran-rappdirs (0.3.3-1) ... 377s Selecting previously unselected package r-cran-sass. 377s Preparing to unpack .../215-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 377s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 378s Selecting previously unselected package r-cran-bslib. 378s Preparing to unpack .../216-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 378s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 378s Selecting previously unselected package r-cran-fontawesome. 378s Preparing to unpack .../217-r-cran-fontawesome_0.5.2-1_all.deb ... 378s Unpacking r-cran-fontawesome (0.5.2-1) ... 379s Selecting previously unselected package r-cran-tinytex. 379s Preparing to unpack .../218-r-cran-tinytex_0.49-1_all.deb ... 379s Unpacking r-cran-tinytex (0.49-1) ... 379s Selecting previously unselected package libjs-modernizr. 379s Preparing to unpack .../219-libjs-modernizr_2.6.2+ds1-5_all.deb ... 379s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 379s Selecting previously unselected package r-cran-pkgkitten. 379s Preparing to unpack .../220-r-cran-pkgkitten_0.2.3-1_all.deb ... 379s Unpacking r-cran-pkgkitten (0.2.3-1) ... 379s Selecting previously unselected package r-cran-rcpp. 379s Preparing to unpack .../221-r-cran-rcpp_1.0.12-1_arm64.deb ... 379s Unpacking r-cran-rcpp (1.0.12-1) ... 380s Selecting previously unselected package r-cran-later. 380s Preparing to unpack .../222-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 380s Unpacking r-cran-later (1.3.2+dfsg-1) ... 380s Selecting previously unselected package r-cran-promises. 380s Preparing to unpack .../223-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 380s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 380s Selecting previously unselected package r-cran-httpuv. 380s Preparing to unpack .../224-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 380s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 381s Selecting previously unselected package r-cran-xtable. 381s Preparing to unpack .../225-r-cran-xtable_1%3a1.8-4-2_all.deb ... 381s Unpacking r-cran-xtable (1:1.8-4-2) ... 381s Selecting previously unselected package r-cran-sourcetools. 381s Preparing to unpack .../226-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 381s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 381s Selecting previously unselected package r-cran-crayon. 381s Preparing to unpack .../227-r-cran-crayon_1.5.2-1_all.deb ... 381s Unpacking r-cran-crayon (1.5.2-1) ... 381s Selecting previously unselected package r-cran-commonmark. 381s Preparing to unpack .../228-r-cran-commonmark_1.9.1-1_arm64.deb ... 381s Unpacking r-cran-commonmark (1.9.1-1) ... 381s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 381s Preparing to unpack .../229-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 381s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 381s Selecting previously unselected package r-cran-shiny. 381s Preparing to unpack .../230-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 381s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 382s Selecting previously unselected package r-cran-rmarkdown. 382s Preparing to unpack .../231-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 382s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 382s Selecting previously unselected package r-cran-bookdown. 382s Preparing to unpack .../232-r-cran-bookdown_0.37+dfsg-1_all.deb ... 382s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 383s Selecting previously unselected package r-cran-biocmanager. 383s Preparing to unpack .../233-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 383s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 384s Selecting previously unselected package tex-common. 384s Preparing to unpack .../234-tex-common_6.18_all.deb ... 384s Unpacking tex-common (6.18) ... 384s Selecting previously unselected package t1utils. 384s Preparing to unpack .../235-t1utils_1.41-4build2_arm64.deb ... 384s Unpacking t1utils (1.41-4build2) ... 384s Selecting previously unselected package texlive-binaries. 384s Preparing to unpack .../236-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 384s Unpacking texlive-binaries (2023.20230311.66589-9) ... 385s Selecting previously unselected package texlive-base. 385s Preparing to unpack .../237-texlive-base_2023.20240207-1_all.deb ... 385s Unpacking texlive-base (2023.20240207-1) ... 391s Selecting previously unselected package texlive-latex-base. 391s Preparing to unpack .../238-texlive-latex-base_2023.20240207-1_all.deb ... 391s Unpacking texlive-latex-base (2023.20240207-1) ... 393s Selecting previously unselected package texlive-bibtex-extra. 394s Preparing to unpack .../239-texlive-bibtex-extra_2023.20240207-1_all.deb ... 394s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 417s Selecting previously unselected package r-bioc-biocstyle. 417s Preparing to unpack .../240-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 417s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 418s Selecting previously unselected package r-bioc-iranges. 418s Preparing to unpack .../241-r-bioc-iranges_2.36.0-1_arm64.deb ... 418s Unpacking r-bioc-iranges (2.36.0-1) ... 418s Selecting previously unselected package r-bioc-zlibbioc. 418s Preparing to unpack .../242-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 418s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 418s Selecting previously unselected package r-bioc-xvector. 418s Preparing to unpack .../243-r-bioc-xvector_0.42.0-1_arm64.deb ... 418s Unpacking r-bioc-xvector (0.42.0-1) ... 418s Selecting previously unselected package r-cran-bitops. 419s Preparing to unpack .../244-r-cran-bitops_1.0-7-1_arm64.deb ... 419s Unpacking r-cran-bitops (1.0-7-1) ... 419s Selecting previously unselected package r-cran-rcurl. 419s Preparing to unpack .../245-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 419s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 419s Selecting previously unselected package r-bioc-genomeinfodbdata. 419s Preparing to unpack .../246-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 419s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 420s Selecting previously unselected package r-bioc-genomeinfodb. 420s Preparing to unpack .../247-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 420s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 421s Selecting previously unselected package r-bioc-biostrings. 421s Preparing to unpack .../248-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 421s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 422s Selecting previously unselected package r-cran-lattice. 422s Preparing to unpack .../249-r-cran-lattice_0.22-5-1_arm64.deb ... 422s Unpacking r-cran-lattice (0.22-5-1) ... 422s Selecting previously unselected package r-cran-matrix. 422s Preparing to unpack .../250-r-cran-matrix_1.6-5-1_arm64.deb ... 422s Unpacking r-cran-matrix (1.6-5-1) ... 424s Selecting previously unselected package r-cran-matrixstats. 424s Preparing to unpack .../251-r-cran-matrixstats_1.2.0-1_arm64.deb ... 424s Unpacking r-cran-matrixstats (1.2.0-1) ... 425s Selecting previously unselected package r-bioc-matrixgenerics. 425s Preparing to unpack .../252-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 425s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 425s Selecting previously unselected package r-cran-abind. 425s Preparing to unpack .../253-r-cran-abind_1.4-5-2_all.deb ... 425s Unpacking r-cran-abind (1.4-5-2) ... 425s Selecting previously unselected package r-bioc-s4arrays. 426s Preparing to unpack .../254-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 426s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 426s Selecting previously unselected package r-bioc-sparsearray. 426s Preparing to unpack .../255-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 426s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 426s Selecting previously unselected package r-bioc-delayedarray. 426s Preparing to unpack .../256-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 426s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 427s Selecting previously unselected package r-bioc-genomicranges. 427s Preparing to unpack .../257-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 427s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 427s Selecting previously unselected package r-bioc-summarizedexperiment. 428s Preparing to unpack .../258-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 428s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 428s Selecting previously unselected package r-bioc-rhtslib. 428s Preparing to unpack .../259-r-bioc-rhtslib_2.4.1+dfsg-1_arm64.deb ... 428s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 428s Selecting previously unselected package r-bioc-rsamtools. 429s Preparing to unpack .../260-r-bioc-rsamtools_2.18.0+dfsg-1_arm64.deb ... 429s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 429s Selecting previously unselected package r-bioc-genomicalignments. 429s Preparing to unpack .../261-r-bioc-genomicalignments_1.38.2-1_arm64.deb ... 429s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 429s Selecting previously unselected package r-cran-xml. 429s Preparing to unpack .../262-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 429s Unpacking r-cran-xml (3.99-0.16.1-1) ... 430s Selecting previously unselected package r-cran-rjson. 430s Preparing to unpack .../263-r-cran-rjson_0.2.21-1_arm64.deb ... 430s Unpacking r-cran-rjson (0.2.21-1) ... 430s Selecting previously unselected package r-cran-restfulr. 430s Preparing to unpack .../264-r-cran-restfulr_0.0.15-1_arm64.deb ... 430s Unpacking r-cran-restfulr (0.0.15-1) ... 430s Selecting previously unselected package r-bioc-rtracklayer. 430s Preparing to unpack .../265-r-bioc-rtracklayer_1.62.0-1_arm64.deb ... 430s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 430s Selecting previously unselected package r-cran-brio. 430s Preparing to unpack .../266-r-cran-brio_1.1.4-1_arm64.deb ... 430s Unpacking r-cran-brio (1.1.4-1) ... 430s Selecting previously unselected package r-cran-ps. 431s Preparing to unpack .../267-r-cran-ps_1.7.6-1_arm64.deb ... 431s Unpacking r-cran-ps (1.7.6-1) ... 431s Selecting previously unselected package r-cran-processx. 431s Preparing to unpack .../268-r-cran-processx_3.8.3-1_arm64.deb ... 431s Unpacking r-cran-processx (3.8.3-1) ... 431s Selecting previously unselected package r-cran-callr. 431s Preparing to unpack .../269-r-cran-callr_3.7.3-2_all.deb ... 431s Unpacking 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/usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 450s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 450s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 450s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 450s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 450s Setting up r-cran-bitops (1.0-7-1) ... 450s Setting up r-cran-rprojroot (2.0.4-1) ... 450s Setting up r-cran-bit64 (4.0.5-1) ... 450s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 450s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 450s Setting up r-cran-askpass (1.2.0-1) ... 450s Setting up r-cran-fastmap (1.1.1-1) ... 450s Setting up r-bioc-biobase (2.62.0-1) ... 450s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 450s Setting up 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450s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 450s Setting up r-bioc-xvector (0.42.0-1) ... 450s Setting up r-cran-pkgbuild (1.4.3-1) ... 450s Setting up r-cran-sass (0.4.8+dfsg-1) ... 450s Setting up r-cran-dplyr (1.1.4-1) ... 450s Setting up r-cran-rsqlite (2.3.4-1) ... 450s Setting up r-cran-pkgload (1.3.4-1) ... 451s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 451s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 451s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 451s Setting up r-cran-rematch2 (2.1.2-2build1) ... 451s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 451s Setting up r-cran-fontawesome (0.5.2-1) ... 451s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 451s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 451s Setting up r-cran-waldo (0.5.2-1build1) ... 451s Setting up r-cran-tidyr (1.3.1-1) ... 451s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 451s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 451s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 451s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 451s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 451s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 451s Setting up r-cran-testthat (3.2.1-1) ... 451s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 451s Setting up r-bioc-genomicalignments (1.38.2-1) ... 451s Setting up r-cran-bookdown (0.37+dfsg-1) ... 451s Setting up r-bioc-rtracklayer (1.62.0-1) ... 451s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 451s Setting up autopkgtest-satdep (0) ... 451s Processing triggers for man-db (2.12.0-3) ... 455s Processing triggers for install-info (7.1-3) ... 456s Processing triggers for libc-bin (2.39-0ubuntu2) ... 456s Processing triggers for tex-common (6.18) ... 458s Running updmap-sys. This may take some time... done. 458s Running mktexlsr /var/lib/texmf ... done. 458s Building format(s) --all. 580s This may take some time... done. 617s (Reading database ... 125881 files and directories currently installed.) 617s Removing autopkgtest-satdep (0) ... 618s autopkgtest [17:32:12]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 618s autopkgtest [17:32:12]: test pkg-r-autopkgtest: [----------------------- 618s Test: Try to load the R library BiocFileCache 618s 618s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 618s Copyright (C) 2024 The R Foundation for Statistical Computing 618s Platform: aarch64-unknown-linux-gnu (64-bit) 618s 618s R is free software and comes with ABSOLUTELY NO WARRANTY. 618s You are welcome to redistribute it under certain conditions. 618s Type 'license()' or 'licence()' for distribution details. 618s 618s R is a collaborative project with many contributors. 618s Type 'contributors()' for more information and 618s 'citation()' on how to cite R or R packages in publications. 618s 618s Type 'demo()' for some demos, 'help()' for on-line help, or 618s 'help.start()' for an HTML browser interface to help. 618s Type 'q()' to quit R. 618s 619s > library('BiocFileCache') 619s Loading required package: dbplyr 623s > 623s > 623s Other tests are currently unsupported! 623s They will be progressively added. 623s autopkgtest [17:32:17]: test pkg-r-autopkgtest: -----------------------] 624s autopkgtest [17:32:18]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 624s pkg-r-autopkgtest PASS 625s autopkgtest [17:32:19]: @@@@@@@@@@@@@@@@@@@@ summary 625s pkg-r-autopkgtest PASS 635s Creating nova instance adt-noble-arm64-r-bioc-biocfilecache-20240316-172154-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240316.img (UUID 9d2e92bf-2787-45c2-ae22-99fb4bcc175e)...