0s autopkgtest [21:42:07]: starting date and time: 2024-03-16 21:42:07+0000 0s autopkgtest [21:42:07]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:42:07]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.j05ma_jp/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-curl,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-annotationhub --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-curl/5.2.0+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-4.secgroup --name adt-noble-arm64-r-bioc-annotationhub-20240316-214207-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 90s autopkgtest [21:43:37]: testbed dpkg architecture: arm64 90s autopkgtest [21:43:37]: testbed apt version: 2.7.12 90s autopkgtest [21:43:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 90s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 91s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 91s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 91s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3699 kB] 91s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 91s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 91s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 91s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 91s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 91s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4018 kB] 91s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 91s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.5 kB] 91s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 93s Fetched 9112 kB in 2s (5233 kB/s) 94s Reading package lists... 97s Reading package lists... 97s Building dependency tree... 97s Reading state information... 98s Calculating upgrade... 98s The following packages will be REMOVED: 98s libssl3 98s The following NEW packages will be installed: 98s libssl3t64 98s The following packages have been kept back: 98s curl 98s The following packages will be upgraded: 98s openssl ubuntu-minimal ubuntu-standard 98s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 98s Need to get 2775 kB of archives. 98s After this operation, 72.7 kB of additional disk space will be used. 98s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 99s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 99s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-minimal arm64 1.536 [10.7 kB] 99s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 ubuntu-standard arm64 1.536 [10.7 kB] 100s Fetched 2775 kB in 1s (3835 kB/s) 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 100s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 100s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 100s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 100s wget depends on libssl3 (>= 3.0.0). 100s u-boot-tools depends on libssl3 (>= 3.0.0). 100s tnftp depends on libssl3 (>= 3.0.0). 100s tcpdump depends on libssl3 (>= 3.0.0). 100s systemd-resolved depends on libssl3 (>= 3.0.0). 100s systemd depends on libssl3 (>= 3.0.0). 100s sudo depends on libssl3 (>= 3.0.0). 100s sbsigntool depends on libssl3 (>= 3.0.0). 100s rsync depends on libssl3 (>= 3.0.0). 100s python3-cryptography depends on libssl3 (>= 3.0.0). 100s openssh-server depends on libssl3 (>= 3.0.10). 100s openssh-client depends on libssl3 (>= 3.0.10). 100s mtd-utils depends on libssl3 (>= 3.0.0). 100s mokutil depends on libssl3 (>= 3.0.0). 100s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 100s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 100s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 100s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 100s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 100s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 100s libnvme1 depends on libssl3 (>= 3.0.0). 100s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 100s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 100s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 100s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 100s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 100s kmod depends on libssl3 (>= 3.0.0). 100s dhcpcd-base depends on libssl3 (>= 3.0.0). 100s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 100s 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 100s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 100s Selecting previously unselected package libssl3t64:arm64. 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74747 files and directories currently installed.) 100s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 100s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 100s Preparing to unpack .../ubuntu-minimal_1.536_arm64.deb ... 100s Unpacking ubuntu-minimal (1.536) over (1.535) ... 100s Preparing to unpack .../ubuntu-standard_1.536_arm64.deb ... 100s Unpacking ubuntu-standard (1.536) over (1.535) ... 100s Setting up ubuntu-minimal (1.536) ... 100s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 100s Setting up ubuntu-standard (1.536) ... 100s Setting up openssl (3.0.13-0ubuntu1) ... 100s Processing triggers for man-db (2.12.0-3) ... 101s Processing triggers for libc-bin (2.39-0ubuntu2) ... 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 104s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 104s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 104s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 105s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 105s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 106s Reading package lists... 106s Reading package lists... 107s Building dependency tree... 107s Reading state information... 107s Calculating upgrade... 107s The following packages have been kept back: 107s curl 107s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 107s Reading package lists... 108s Building dependency tree... 108s Reading state information... 108s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 111s autopkgtest [21:43:58]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 111s autopkgtest [21:43:58]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-annotationhub 113s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-annotationhub 3.10.0+dfsg-1 (dsc) [2403 B] 113s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-annotationhub 3.10.0+dfsg-1 (tar) [170 kB] 113s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-annotationhub 3.10.0+dfsg-1 (diff) [5564 B] 114s gpgv: Signature made Thu Nov 30 13:34:36 2023 UTC 114s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 114s gpgv: issuer "tillea@rki.de" 114s gpgv: Can't check signature: No public key 114s dpkg-source: warning: cannot verify inline signature for ./r-bioc-annotationhub_3.10.0+dfsg-1.dsc: no acceptable signature found 114s autopkgtest [21:44:01]: testing package r-bioc-annotationhub version 3.10.0+dfsg-1 114s autopkgtest [21:44:01]: build not needed 116s autopkgtest [21:44:03]: test pkg-r-autopkgtest: preparing testbed 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 118s Starting pkgProblemResolver with broken count: 0 118s Starting 2 pkgProblemResolver with broken count: 0 118s Done 119s The following additional packages will be installed: 119s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 119s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 119s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 119s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 119s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 119s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 119s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 119s libatomic1 libbibtex-parser-perl libblas-dev libblas3 libboost-dev 119s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 119s libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 119s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 119s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 119s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 119s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 119s libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions 119s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 119s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 119s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 119s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 119s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev 119s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 119s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 119s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 libptexenc1 119s libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 119s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 119s libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 119s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 119s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 119s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 119s r-base-core r-base-dev r-bioc-annotationdbi r-bioc-annotationfilter 119s r-bioc-annotationhub r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 119s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biocversion 119s r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome r-bioc-delayedarray 119s r-bioc-ensembldb r-bioc-experimenthub r-bioc-genomeinfodb 119s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 119s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 119s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-protgenerics r-bioc-rhtslib 119s r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 119s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-variantannotation 119s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 119s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 119s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 119s r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon 119s r-cran-crosstalk r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-digest 119s r-cran-dplyr r-cran-dt r-cran-ellipsis r-cran-evaluate r-cran-fansi 119s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 119s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 119s r-cran-highr r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv 119s r-cran-httr r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r 119s r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 119s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 119s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 119s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 119s r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-restfulr 119s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-runit 119s r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-stringi 119s r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 119s r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml 119s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 119s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 119s x11-common xdg-utils zip zlib1g-dev 119s Suggested packages: 119s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 119s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 119s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 119s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 119s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 119s libboost-context1.83-dev libboost-contract1.83-dev 119s libboost-coroutine1.83-dev libboost-date-time1.83-dev 119s libboost-exception1.83-dev libboost-fiber1.83-dev 119s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 119s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 119s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 119s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 119s libboost-numpy1.83-dev libboost-program-options1.83-dev 119s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 119s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 119s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 119s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 119s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 119s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 119s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 119s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 119s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 119s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 119s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 119s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 119s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-cran-testthat r-bioc-all 119s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc 119s r-cran-doparallel r-bioc-shortread r-cran-batchtools r-cran-data.table 119s r-cran-mockery r-cran-webmockr r-bioc-hdf5array r-bioc-genefilter 119s r-cran-lobstr r-bioc-delayedmatrixstats r-bioc-ggbio r-bioc-gviz 119s r-cran-r.utils r-bioc-edger r-cran-markdown r-bioc-dexseq 119s r-bioc-sparsematrixstats r-bioc-limma r-bioc-rhdf5 r-bioc-snpstats 119s r-cran-ggplot2 r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-rstudioapi 119s r-cran-rmysql r-cran-lubridate r-cran-getopt r-cran-formattable 119s r-cran-nanotime r-cran-palmerpenguins r-cran-scales r-cran-survival 119s r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer 119s r-cran-spelling r-cran-bench r-cran-brio r-cran-callr r-cran-here 119s r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper ghostscript 119s gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-binaries-sse2 119s hintview texlive-latex-base-doc wp2latex 119s Recommended packages: 119s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 119s r-recommended r-doc-html r-cran-testthat r-cran-remotes r-cran-downlit 119s r-cran-rstudioapi r-cran-miniui r-cran-rsconnect r-cran-testit r-cran-tufte 119s r-cran-webshot r-cran-ggplot2 r-cran-thematic r-cran-callr r-cran-covr 119s r-cran-mockery r-cran-processx r-cran-ps r-cran-rprojroot r-cran-whoami 119s r-cran-bench r-cran-brio r-cran-decor r-cran-desc r-cran-lobstr 119s r-cran-scales r-cran-spelling r-cran-webutils r-cran-rpostgresql 119s r-cran-broom r-cran-rmysql r-cran-future w3m | www-browser r-cran-unitizer 119s r-cran-rsvg r-cran-survival r-cran-pkgload r-cran-waldo r-cran-cairo 119s r-cran-markdown r-cran-ragg r-cran-jpeg r-cran-readr r-cran-r.rsp r-cran-sf 119s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 119s r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse 119s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-usethis 119s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 119s r-cran-data.table r-cran-mockr r-cran-formattable r-cran-pkgdown 119s r-cran-zeallot r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl 119s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 119s The following packages will be REMOVED: 119s libcurl4 libpsl5 119s The following NEW packages will be installed: 119s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 119s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 119s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 119s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 119s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 119s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 119s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 119s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 119s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 119s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 119s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 119s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl 119s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 119s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 119s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 119s libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui 119s libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 119s libjs-popper.js libjs-prettify libjs-sifter.js 119s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 119s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 119s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 119s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 119s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 119s libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libsharpyuv0 libsm6 119s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 119s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 119s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 119s libxss1 libxt6 libzzip-0-13 linux-libc-dev littler node-bootstrap-sass 119s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 119s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 119s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-annotationhub 119s r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio 119s r-bioc-biocparallel r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart 119s r-bioc-biostrings r-bioc-bsgenome r-bioc-delayedarray r-bioc-ensembldb 119s r-bioc-experimenthub r-bioc-genomeinfodb r-bioc-genomeinfodbdata 119s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 119s r-bioc-interactivedisplaybase r-bioc-iranges r-bioc-keggrest 119s r-bioc-matrixgenerics r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools 119s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 119s r-bioc-summarizedexperiment r-bioc-variantannotation r-bioc-xvector 119s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh 119s r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 119s r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli r-cran-codetools 119s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 119s r-cran-dbi r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-dt 119s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap r-cran-filelock 119s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 119s r-cran-futile.options r-cran-generics r-cran-glue r-cran-highr r-cran-hms 119s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 119s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later 119s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 119s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 119s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 119s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 119s r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-restfulr 119s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-runit 119s r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-stringi 119s r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 119s r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml 119s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 119s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 119s x11-common xdg-utils zip zlib1g-dev 119s The following packages will be upgraded: 119s curl 119s 1 upgraded, 292 newly installed, 2 to remove and 0 not upgraded. 119s Need to get 430 MB/430 MB of archives. 119s After this operation, 1355 MB of additional disk space will be used. 119s Get:1 /tmp/autopkgtest.pCTdaD/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [856 B] 119s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 119s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 119s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 120s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 120s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 120s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 120s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 120s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 120s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 120s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 120s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 120s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 120s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 120s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 120s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 120s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 120s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 120s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 120s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 120s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 120s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 120s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 120s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 120s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 120s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 120s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 120s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 121s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 121s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 121s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 121s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 121s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 121s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 121s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 121s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 121s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 121s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 121s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 121s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 121s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 121s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 121s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 121s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 121s Get:45 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 121s Get:46 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 121s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 121s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 121s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 121s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 122s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 122s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 122s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 122s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 122s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 122s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 122s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 122s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 122s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 122s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 122s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.83-dev arm64 1.83.0-2ubuntu1 [15.3 MB] 122s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.83.0.1ubuntu2 [4308 B] 122s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 122s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 122s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 122s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 122s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 122s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 122s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 122s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 122s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 122s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 122s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 122s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 122s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 122s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 122s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 122s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 122s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 122s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 122s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 122s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 122s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 122s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 122s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 122s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 122s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 122s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 122s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] 122s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 122s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 122s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 122s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 122s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 122s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 122s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 122s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 122s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 122s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 123s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 123s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 123s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 123s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 123s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 123s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 123s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 123s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 123s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 123s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 123s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 123s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 123s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 123s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 123s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 123s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 123s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libpng-dev arm64 1.6.43-1 [266 kB] 123s Get:117 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 123s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 123s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 libreadline-dev arm64 8.2-3 [177 kB] 123s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 123s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 123s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 123s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 123s Get:124 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 123s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 123s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 123s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 123s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 123s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 123s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 123s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 123s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB] 123s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 123s Get:134 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 123s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 123s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 123s Get:137 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 123s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 123s Get:139 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 123s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 123s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-core arm64 4.3.2-1build1 [26.8 MB] 124s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 124s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 124s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 124s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 124s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 124s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 124s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 125s Get:149 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 125s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 125s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 125s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 125s Get:153 http://ftpmaster.internal/ubuntu noble/universe arm64 r-base-dev all 4.3.2-1build1 [4336 B] 125s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 125s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 125s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 125s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 125s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 125s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 125s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 125s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 125s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 125s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 125s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 125s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 125s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 125s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 125s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 125s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 125s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 125s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 125s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 125s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 125s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 125s Get:175 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1build1 [176 kB] 125s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 125s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 125s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 125s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 125s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 125s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 125s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 125s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 125s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 125s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 125s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 125s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 125s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 126s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 126s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 126s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 126s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 126s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 126s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicranges arm64 1.54.1+dfsg-1 [1822 kB] 126s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 126s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationfilter all 1.26.0+dfsg-1 [239 kB] 126s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 126s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 126s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 126s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 126s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 126s Get:202 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 126s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 126s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyselect arm64 1.2.0+dfsg-1 [218 kB] 127s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dplyr arm64 1.1.4-1 [1513 kB] 127s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-purrr arm64 1.0.2-1 [501 kB] 127s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 127s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 127s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 127s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 127s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 127s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 127s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 127s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocversion all 3.18.1-1 [11.0 kB] 127s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 127s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 127s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 127s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 127s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 127s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 127s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 127s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 127s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 127s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 127s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 127s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 127s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 127s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 127s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 127s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 127s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 127s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 127s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 128s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 128s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 128s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 128s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 128s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 128s Get:239 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 128s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 128s Get:241 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 128s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 128s Get:243 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 128s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 128s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 128s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dt all 0.31+dfsg-1 [265 kB] 128s Get:247 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-interactivedisplaybase all 1.40.0+dfsg-1 [30.4 kB] 128s Get:248 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationhub all 3.10.0+dfsg-1 [454 kB] 128s Get:249 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 128s Get:250 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-formatr all 1.14-1 [152 kB] 128s Get:251 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 128s Get:252 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 128s Get:253 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 128s Get:254 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 128s Get:255 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-codetools all 0.2-19-1 [90.5 kB] 128s Get:256 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 128s Get:257 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocparallel arm64 1.36.0-1 [1345 kB] 128s Get:258 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 128s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 128s Get:260 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 128s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 128s Get:262 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 129s Get:263 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 129s Get:264 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 132s Get:265 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 132s Get:266 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml arm64 3.99-0.16.1-1 [1734 kB] 132s Get:267 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 132s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 132s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 132s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xml2 arm64 1.3.6-1 [321 kB] 132s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 132s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rhtslib arm64 2.4.1+dfsg-1 [1357 kB] 132s Get:273 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rsamtools arm64 2.18.0+dfsg-1 [3629 kB] 132s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrixstats arm64 1.2.0-1 [475 kB] 132s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 132s Get:276 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lattice arm64 0.22-5-1 [1342 kB] 132s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-matrix arm64 1.6-5-1 [3776 kB] 133s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-abind all 1.4-5-2 [63.6 kB] 133s Get:279 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4arrays arm64 1.2.0+dfsg-1 [501 kB] 133s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-sparsearray arm64 1.2.4+dfsg-1 [1195 kB] 133s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-delayedarray arm64 0.28.0+dfsg-1 [1786 kB] 133s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 133s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicalignments arm64 1.38.2-1 [2133 kB] 133s Get:284 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rjson arm64 0.2.21-1 [142 kB] 133s Get:285 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 133s Get:286 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-rtracklayer arm64 1.62.0-1 [5104 kB] 133s Get:287 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-bsgenome all 1.70.2-1 [6975 kB] 133s Get:288 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 133s Get:289 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-protgenerics all 1.34.0-1 [225 kB] 133s Get:290 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-ensembldb all 2.26.0+dfsg-1 [1489 kB] 133s Get:291 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-experimenthub all 2.10.0+ds-1 [79.9 kB] 133s Get:292 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-variantannotation arm64 1.48.1-1 [3526 kB] 133s Get:293 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-runit all 0.4.32-3 [283 kB] 135s Preconfiguring packages ... 135s Fetched 430 MB in 15s (29.6 MB/s) 135s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 135s wget depends on libpsl5 (>= 0.16.0). 135s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 135s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 135s 135s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74760 files and directories currently installed.) 135s Removing libpsl5:arm64 (0.21.2-1build1) ... 135s Selecting previously unselected package libpsl5t64:arm64. 135s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74755 files and directories currently installed.) 135s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 135s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 135s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 135s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 135s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74761 files and directories currently installed.) 135s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 135s Selecting previously unselected package libcurl4t64:arm64. 135s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74756 files and directories currently installed.) 135s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 135s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 135s Selecting previously unselected package libc-dev-bin. 135s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 135s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 135s Selecting previously unselected package linux-libc-dev:arm64. 135s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 135s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 135s Selecting previously unselected package libcrypt-dev:arm64. 135s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 135s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 135s Selecting previously unselected package libtirpc-dev:arm64. 135s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 135s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 135s Selecting previously unselected package libnsl-dev:arm64. 135s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 135s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 135s Selecting previously unselected package rpcsvc-proto. 135s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 135s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 135s Selecting previously unselected package libc6-dev:arm64. 135s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 135s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 136s Selecting previously unselected package libisl23:arm64. 136s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 136s Unpacking libisl23:arm64 (0.26-3) ... 136s Selecting previously unselected package libmpc3:arm64. 136s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 136s Unpacking libmpc3:arm64 (1.3.1-1) ... 136s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 136s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 136s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 136s Selecting previously unselected package cpp-13. 136s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 136s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 136s Selecting previously unselected package cpp-aarch64-linux-gnu. 136s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 136s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 136s Selecting previously unselected package cpp. 136s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 136s Unpacking cpp (4:13.2.0-7ubuntu1) ... 136s Selecting previously unselected package libcc1-0:arm64. 136s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 136s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 136s Selecting previously unselected package libgomp1:arm64. 136s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 136s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 136s Selecting previously unselected package libitm1:arm64. 136s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 136s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 136s Selecting previously unselected package libatomic1:arm64. 136s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 136s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 136s Selecting previously unselected package libasan8:arm64. 136s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 136s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 136s Selecting previously unselected package liblsan0:arm64. 136s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 136s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 136s Selecting previously unselected package libtsan2:arm64. 136s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 136s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 136s Selecting previously unselected package libubsan1:arm64. 136s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 136s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 136s Selecting previously unselected package libhwasan0:arm64. 136s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 136s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 136s Selecting previously unselected package libgcc-13-dev:arm64. 136s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 136s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 136s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 136s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 136s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 137s Selecting previously unselected package gcc-13. 137s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 137s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 137s Selecting previously unselected package gcc-aarch64-linux-gnu. 137s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 137s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 137s Selecting previously unselected package gcc. 137s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 137s Unpacking gcc (4:13.2.0-7ubuntu1) ... 137s Selecting previously unselected package libstdc++-13-dev:arm64. 137s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 137s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 137s Selecting previously unselected package g++-13-aarch64-linux-gnu. 137s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 137s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 137s Selecting previously unselected package g++-13. 137s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 137s Unpacking g++-13 (13.2.0-17ubuntu2) ... 137s Selecting previously unselected package g++-aarch64-linux-gnu. 137s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 137s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 137s Selecting previously unselected package g++. 137s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 137s Unpacking g++ (4:13.2.0-7ubuntu1) ... 137s Selecting previously unselected package build-essential. 137s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 137s Unpacking build-essential (12.10ubuntu1) ... 137s Selecting previously unselected package dctrl-tools. 137s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 137s Unpacking dctrl-tools (2.24-3build2) ... 137s Selecting previously unselected package fonts-dejavu-mono. 137s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 137s Unpacking fonts-dejavu-mono (2.37-8) ... 137s Selecting previously unselected package fonts-dejavu-core. 137s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 137s Unpacking fonts-dejavu-core (2.37-8) ... 137s Selecting previously unselected package fontconfig-config. 138s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 138s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 138s Selecting previously unselected package libfontconfig1:arm64. 138s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 138s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 138s Selecting previously unselected package fontconfig. 138s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 138s Unpacking fontconfig (2.15.0-1ubuntu1) ... 138s Selecting previously unselected package fonts-font-awesome. 138s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 138s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 138s Selecting previously unselected package fonts-glyphicons-halflings. 138s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 138s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 138s Selecting previously unselected package fonts-lmodern. 138s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 138s Unpacking fonts-lmodern (2.005-1) ... 138s Selecting previously unselected package fonts-mathjax. 138s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 138s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 138s Selecting previously unselected package libgfortran5:arm64. 138s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 138s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 138s Selecting previously unselected package libgfortran-13-dev:arm64. 138s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 138s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 138s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 138s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 138s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 138s Selecting previously unselected package gfortran-13. 138s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 138s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 138s Selecting previously unselected package gfortran-aarch64-linux-gnu. 138s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 138s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 138s Selecting previously unselected package gfortran. 139s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 139s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 139s Selecting previously unselected package icu-devtools. 139s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_arm64.deb ... 139s Unpacking icu-devtools (74.2-1ubuntu1) ... 139s Selecting previously unselected package javascript-common. 139s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 139s Unpacking javascript-common (11+nmu1) ... 139s Selecting previously unselected package libio-string-perl. 139s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 139s Unpacking libio-string-perl (1.08-4) ... 139s Selecting previously unselected package liblatex-tounicode-perl. 139s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 139s Unpacking liblatex-tounicode-perl (0.54-2) ... 139s Selecting previously unselected package libbibtex-parser-perl. 139s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 139s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 139s Selecting previously unselected package libblas3:arm64. 139s Preparing to unpack .../055-libblas3_3.12.0-3_arm64.deb ... 139s Unpacking libblas3:arm64 (3.12.0-3) ... 139s Selecting previously unselected package libblas-dev:arm64. 139s Preparing to unpack .../056-libblas-dev_3.12.0-3_arm64.deb ... 139s Unpacking libblas-dev:arm64 (3.12.0-3) ... 139s Selecting previously unselected package libboost1.83-dev:arm64. 139s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_arm64.deb ... 139s Unpacking libboost1.83-dev:arm64 (1.83.0-2ubuntu1) ... 141s Selecting previously unselected package libboost-dev:arm64. 141s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_arm64.deb ... 141s Unpacking libboost-dev:arm64 (1.83.0.1ubuntu2) ... 141s Selecting previously unselected package libbz2-dev:arm64. 141s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 141s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 141s Selecting previously unselected package libpixman-1-0:arm64. 141s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_arm64.deb ... 141s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 141s Selecting previously unselected package libxcb-render0:arm64. 141s Preparing to unpack .../061-libxcb-render0_1.15-1_arm64.deb ... 141s Unpacking libxcb-render0:arm64 (1.15-1) ... 141s Selecting previously unselected package libxcb-shm0:arm64. 141s Preparing to unpack .../062-libxcb-shm0_1.15-1_arm64.deb ... 141s Unpacking libxcb-shm0:arm64 (1.15-1) ... 141s Selecting previously unselected package libxrender1:arm64. 141s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 141s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 141s Selecting previously unselected package libcairo2:arm64. 141s Preparing to unpack .../064-libcairo2_1.18.0-1_arm64.deb ... 141s Unpacking libcairo2:arm64 (1.18.0-1) ... 141s Selecting previously unselected package libdatrie1:arm64. 141s Preparing to unpack .../065-libdatrie1_0.2.13-3_arm64.deb ... 141s Unpacking libdatrie1:arm64 (0.2.13-3) ... 141s Selecting previously unselected package libdeflate0:arm64. 141s Preparing to unpack .../066-libdeflate0_1.19-1_arm64.deb ... 141s Unpacking libdeflate0:arm64 (1.19-1) ... 141s Selecting previously unselected package libgraphite2-3:arm64. 141s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_arm64.deb ... 141s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 141s Selecting previously unselected package libharfbuzz0b:arm64. 141s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_arm64.deb ... 141s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 141s Selecting previously unselected package x11-common. 141s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 141s Unpacking x11-common (1:7.7+23ubuntu2) ... 141s Selecting previously unselected package libice6:arm64. 141s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_arm64.deb ... 141s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 141s Selecting previously unselected package libicu-dev:arm64. 141s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_arm64.deb ... 141s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 141s Selecting previously unselected package libjpeg-turbo8:arm64. 141s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 141s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 141s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 141s Preparing to unpack .../073-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 141s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 141s Selecting previously unselected package libjpeg8:arm64. 141s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_arm64.deb ... 141s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 141s Selecting previously unselected package libjpeg8-dev:arm64. 142s Preparing to unpack .../075-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 142s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 142s Selecting previously unselected package libjpeg-dev:arm64. 142s Preparing to unpack .../076-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 142s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 142s Selecting previously unselected package libjs-bootstrap. 142s Preparing to unpack .../077-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 142s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 142s Selecting previously unselected package libjs-popper.js. 142s Preparing to unpack .../078-libjs-popper.js_1.16.1+ds-6_all.deb ... 142s Unpacking libjs-popper.js (1.16.1+ds-6) ... 142s Selecting previously unselected package libjs-bootstrap4. 142s Preparing to unpack .../079-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 142s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 142s Selecting previously unselected package libjs-d3. 142s Preparing to unpack .../080-libjs-d3_3.5.17-4_all.deb ... 142s Unpacking libjs-d3 (3.5.17-4) ... 142s Selecting previously unselected package libjs-es5-shim. 142s Preparing to unpack .../081-libjs-es5-shim_4.6.7-2_all.deb ... 142s Unpacking libjs-es5-shim (4.6.7-2) ... 142s Selecting previously unselected package libjs-highlight.js. 142s Preparing to unpack .../082-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 142s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 142s Selecting previously unselected package libjs-jquery. 142s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 142s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 142s Selecting previously unselected package libjs-jquery-datatables. 142s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 142s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 142s Selecting previously unselected package libjs-jquery-datatables-extensions. 142s Preparing to unpack .../085-libjs-jquery-datatables-extensions_0.0+git20150910.28fd64e+dfsg-5_all.deb ... 142s Unpacking libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... 142s Selecting previously unselected package libjs-sifter.js. 142s Preparing to unpack .../086-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 142s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 142s Selecting previously unselected package libjs-microplugin.js. 142s Preparing to unpack .../087-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 142s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 142s Selecting previously unselected package libjs-jquery-selectize.js. 142s Preparing to unpack .../088-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 142s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 142s Selecting previously unselected package libjs-jquery-ui. 142s Preparing to unpack .../089-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 142s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 142s Selecting previously unselected package libjs-json. 142s Preparing to unpack .../090-libjs-json_0~20221030+~1.0.8-1_all.deb ... 142s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 142s Selecting previously unselected package libjs-lunr. 142s Preparing to unpack .../091-libjs-lunr_2.3.9~dfsg-2_all.deb ... 142s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 142s Selecting previously unselected package libjs-prettify. 142s Preparing to unpack .../092-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 142s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 142s Selecting previously unselected package libkpathsea6:arm64. 142s Preparing to unpack .../093-libkpathsea6_2023.20230311.66589-9_arm64.deb ... 142s Unpacking libkpathsea6:arm64 (2023.20230311.66589-9) ... 142s Selecting previously unselected package liblapack3:arm64. 142s Preparing to unpack .../094-liblapack3_3.12.0-3_arm64.deb ... 142s Unpacking liblapack3:arm64 (3.12.0-3) ... 142s Selecting previously unselected package liblapack-dev:arm64. 142s Preparing to unpack .../095-liblapack-dev_3.12.0-3_arm64.deb ... 142s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 143s Selecting previously unselected package liblerc4:arm64. 143s Preparing to unpack .../096-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 143s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 143s Selecting previously unselected package liblua5.4-0:arm64. 143s Preparing to unpack .../097-liblua5.4-0_5.4.6-3_arm64.deb ... 143s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 143s Selecting previously unselected package libncurses-dev:arm64. 143s Preparing to unpack .../098-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 143s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 143s Selecting previously unselected package libthai-data. 143s Preparing to unpack .../099-libthai-data_0.1.29-2_all.deb ... 143s Unpacking libthai-data (0.1.29-2) ... 143s Selecting previously unselected package libthai0:arm64. 143s Preparing to unpack .../100-libthai0_0.1.29-2_arm64.deb ... 143s Unpacking libthai0:arm64 (0.1.29-2) ... 143s Selecting previously unselected package libpango-1.0-0:arm64. 143s Preparing to unpack .../101-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 143s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 143s Selecting previously unselected package libpangoft2-1.0-0:arm64. 143s Preparing to unpack .../102-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 143s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 143s Selecting previously unselected package libpangocairo-1.0-0:arm64. 143s Preparing to unpack .../103-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 143s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 143s Selecting previously unselected package libpaper1:arm64. 143s Preparing to unpack .../104-libpaper1_1.1.29_arm64.deb ... 143s Unpacking libpaper1:arm64 (1.1.29) ... 143s Selecting previously unselected package libpaper-utils. 143s Preparing to unpack .../105-libpaper-utils_1.1.29_arm64.deb ... 143s Unpacking libpaper-utils (1.1.29) ... 143s Selecting previously unselected package libpcre2-16-0:arm64. 143s Preparing to unpack .../106-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 143s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 143s Selecting previously unselected package libpcre2-32-0:arm64. 143s Preparing to unpack .../107-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 143s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 143s Selecting previously unselected package libpcre2-posix3:arm64. 143s Preparing to unpack .../108-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 143s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 143s Selecting previously unselected package libpcre2-dev:arm64. 143s Preparing to unpack .../109-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 143s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 143s Selecting previously unselected package libpkgconf3:arm64. 143s Preparing to unpack .../110-libpkgconf3_1.8.1-2_arm64.deb ... 143s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 143s Selecting previously unselected package zlib1g-dev:arm64. 143s Preparing to unpack .../111-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 143s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 143s Selecting previously unselected package libpng-dev:arm64. 143s Preparing to unpack .../112-libpng-dev_1.6.43-1_arm64.deb ... 143s Unpacking libpng-dev:arm64 (1.6.43-1) ... 143s Selecting previously unselected package libpotrace0:arm64. 143s Preparing to unpack .../113-libpotrace0_1.16-2_arm64.deb ... 143s Unpacking libpotrace0:arm64 (1.16-2) ... 143s Selecting previously unselected package libptexenc1:arm64. 143s Preparing to unpack .../114-libptexenc1_2023.20230311.66589-9_arm64.deb ... 143s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 143s Selecting previously unselected package libreadline-dev:arm64. 143s Preparing to unpack .../115-libreadline-dev_8.2-3_arm64.deb ... 143s Unpacking libreadline-dev:arm64 (8.2-3) ... 143s Selecting previously unselected package libsharpyuv0:arm64. 144s Preparing to unpack .../116-libsharpyuv0_1.3.2-0.4_arm64.deb ... 144s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 144s Selecting previously unselected package libsm6:arm64. 144s Preparing to unpack .../117-libsm6_2%3a1.2.3-1build2_arm64.deb ... 144s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 144s Selecting previously unselected package libsynctex2:arm64. 144s Preparing to unpack .../118-libsynctex2_2023.20230311.66589-9_arm64.deb ... 144s Unpacking libsynctex2:arm64 (2023.20230311.66589-9) ... 144s Selecting previously unselected package libtcl8.6:arm64. 144s Preparing to unpack .../119-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 144s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 144s Selecting previously unselected package libteckit0:arm64. 144s Preparing to unpack .../120-libteckit0_2.5.12+ds1-1_arm64.deb ... 144s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 144s Selecting previously unselected package libtexlua53-5:arm64. 144s Preparing to unpack .../121-libtexlua53-5_2023.20230311.66589-9_arm64.deb ... 144s Unpacking libtexlua53-5:arm64 (2023.20230311.66589-9) ... 144s Selecting previously unselected package libjbig0:arm64. 144s Preparing to unpack .../122-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 144s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 144s Selecting previously unselected package libwebp7:arm64. 144s Preparing to unpack .../123-libwebp7_1.3.2-0.4_arm64.deb ... 144s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 144s Selecting previously unselected package libtiff6:arm64. 144s Preparing to unpack .../124-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 144s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 144s Selecting previously unselected package libxft2:arm64. 144s Preparing to unpack .../125-libxft2_2.3.6-1_arm64.deb ... 144s Unpacking libxft2:arm64 (2.3.6-1) ... 144s Selecting previously unselected package libxss1:arm64. 144s Preparing to unpack .../126-libxss1_1%3a1.2.3-1build2_arm64.deb ... 144s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 144s Selecting previously unselected package libtk8.6:arm64. 144s Preparing to unpack .../127-libtk8.6_8.6.13-2_arm64.deb ... 144s Unpacking libtk8.6:arm64 (8.6.13-2) ... 144s Selecting previously unselected package libxt6:arm64. 144s Preparing to unpack .../128-libxt6_1%3a1.2.1-1.1_arm64.deb ... 144s Unpacking libxt6:arm64 (1:1.2.1-1.1) ... 144s Selecting previously unselected package libxmu6:arm64. 144s Preparing to unpack .../129-libxmu6_2%3a1.1.3-3_arm64.deb ... 144s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 144s Selecting previously unselected package libxpm4:arm64. 144s Preparing to unpack .../130-libxpm4_1%3a3.5.17-1_arm64.deb ... 144s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 144s Selecting previously unselected package libxaw7:arm64. 144s Preparing to unpack .../131-libxaw7_2%3a1.0.14-1_arm64.deb ... 144s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 144s Selecting previously unselected package libxi6:arm64. 144s Preparing to unpack .../132-libxi6_2%3a1.8.1-1_arm64.deb ... 144s Unpacking libxi6:arm64 (2:1.8.1-1) ... 144s Selecting previously unselected package libzzip-0-13:arm64. 144s Preparing to unpack .../133-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 144s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 144s Selecting previously unselected package zip. 144s Preparing to unpack .../134-zip_3.0-13_arm64.deb ... 144s Unpacking zip (3.0-13) ... 144s Selecting previously unselected package unzip. 144s Preparing to unpack .../135-unzip_6.0-28ubuntu3_arm64.deb ... 144s Unpacking unzip (6.0-28ubuntu3) ... 144s Selecting previously unselected package xdg-utils. 144s Preparing to unpack .../136-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 144s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 144s Selecting previously unselected package r-base-core. 144s Preparing to unpack .../137-r-base-core_4.3.2-1build1_arm64.deb ... 144s Unpacking r-base-core (4.3.2-1build1) ... 145s Selecting previously unselected package r-cran-littler. 145s Preparing to unpack .../138-r-cran-littler_0.3.19-1_arm64.deb ... 145s Unpacking r-cran-littler (0.3.19-1) ... 145s Selecting previously unselected package littler. 145s Preparing to unpack .../139-littler_0.3.19-1_all.deb ... 145s Unpacking littler (0.3.19-1) ... 145s Selecting previously unselected package node-bootstrap-sass. 145s Preparing to unpack .../140-node-bootstrap-sass_3.4.3-2_all.deb ... 145s Unpacking node-bootstrap-sass (3.4.3-2) ... 145s Selecting previously unselected package node-html5shiv. 145s Preparing to unpack .../141-node-html5shiv_3.7.3+dfsg-5_all.deb ... 145s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 145s Selecting previously unselected package node-normalize.css. 145s Preparing to unpack .../142-node-normalize.css_8.0.1-5_all.deb ... 145s Unpacking node-normalize.css (8.0.1-5) ... 145s Selecting previously unselected package pandoc-data. 145s Preparing to unpack .../143-pandoc-data_3.1.3-1_all.deb ... 145s Unpacking pandoc-data (3.1.3-1) ... 145s Selecting previously unselected package pandoc. 145s Preparing to unpack .../144-pandoc_3.1.3+ds-2_arm64.deb ... 145s Unpacking pandoc (3.1.3+ds-2) ... 146s Selecting previously unselected package pkgconf-bin. 146s Preparing to unpack .../145-pkgconf-bin_1.8.1-2_arm64.deb ... 146s Unpacking pkgconf-bin (1.8.1-2) ... 146s Selecting previously unselected package pkgconf:arm64. 146s Preparing to unpack .../146-pkgconf_1.8.1-2_arm64.deb ... 146s Unpacking pkgconf:arm64 (1.8.1-2) ... 146s Selecting previously unselected package pkg-config:arm64. 146s Preparing to unpack .../147-pkg-config_1.8.1-2_arm64.deb ... 146s Unpacking pkg-config:arm64 (1.8.1-2) ... 146s Selecting previously unselected package liblzma-dev:arm64. 146s Preparing to unpack .../148-liblzma-dev_5.4.5-0.3_arm64.deb ... 146s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 146s Selecting previously unselected package r-base-dev. 146s Preparing to unpack .../149-r-base-dev_4.3.2-1build1_all.deb ... 146s Unpacking r-base-dev (4.3.2-1build1) ... 146s Selecting previously unselected package pkg-r-autopkgtest. 146s Preparing to unpack .../150-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 146s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 146s Selecting previously unselected package r-bioc-biocgenerics. 146s Preparing to unpack .../151-r-bioc-biocgenerics_0.48.1-2_all.deb ... 146s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 146s Selecting previously unselected package r-bioc-biobase. 146s Preparing to unpack .../152-r-bioc-biobase_2.62.0-1_arm64.deb ... 146s Unpacking r-bioc-biobase (2.62.0-1) ... 146s Selecting previously unselected package r-bioc-s4vectors. 146s Preparing to unpack .../153-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 146s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 146s Selecting previously unselected package r-bioc-iranges. 146s Preparing to unpack .../154-r-bioc-iranges_2.36.0-1_arm64.deb ... 146s Unpacking r-bioc-iranges (2.36.0-1) ... 146s Selecting previously unselected package r-cran-dbi. 146s Preparing to unpack .../155-r-cran-dbi_1.2.2-1_all.deb ... 146s Unpacking r-cran-dbi (1.2.2-1) ... 146s Selecting previously unselected package r-cran-bit. 146s Preparing to unpack .../156-r-cran-bit_4.0.5-1_arm64.deb ... 146s Unpacking r-cran-bit (4.0.5-1) ... 146s Selecting previously unselected package r-cran-bit64. 146s Preparing to unpack .../157-r-cran-bit64_4.0.5-1_arm64.deb ... 146s Unpacking r-cran-bit64 (4.0.5-1) ... 146s Selecting previously unselected package r-cran-rlang. 146s Preparing to unpack .../158-r-cran-rlang_1.1.3-1_arm64.deb ... 146s Unpacking r-cran-rlang (1.1.3-1) ... 146s Selecting previously unselected package r-cran-cli. 146s Preparing to unpack .../159-r-cran-cli_3.6.2-1_arm64.deb ... 146s Unpacking r-cran-cli (3.6.2-1) ... 147s Selecting previously unselected package r-cran-glue. 147s Preparing to unpack .../160-r-cran-glue_1.7.0-1_arm64.deb ... 147s Unpacking r-cran-glue (1.7.0-1) ... 147s Selecting previously unselected package r-cran-lifecycle. 147s Preparing to unpack .../161-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 147s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 147s Selecting previously unselected package r-cran-vctrs. 147s Preparing to unpack .../162-r-cran-vctrs_0.6.5-1_arm64.deb ... 147s Unpacking r-cran-vctrs (0.6.5-1) ... 147s Selecting previously unselected package r-cran-blob. 147s Preparing to unpack .../163-r-cran-blob_1.2.4-1_all.deb ... 147s Unpacking r-cran-blob (1.2.4-1) ... 147s Selecting previously unselected package r-cran-fastmap. 147s Preparing to unpack .../164-r-cran-fastmap_1.1.1-1_arm64.deb ... 147s Unpacking r-cran-fastmap (1.1.1-1) ... 147s Selecting previously unselected package r-cran-cachem. 147s Preparing to unpack .../165-r-cran-cachem_1.0.8-1_arm64.deb ... 147s Unpacking r-cran-cachem (1.0.8-1) ... 147s Selecting previously unselected package r-cran-memoise. 147s Preparing to unpack .../166-r-cran-memoise_2.0.1-1_all.deb ... 147s Unpacking r-cran-memoise (2.0.1-1) ... 147s Selecting previously unselected package r-cran-pkgconfig. 147s Preparing to unpack .../167-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 147s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 147s Selecting previously unselected package r-cran-plogr. 147s Preparing to unpack .../168-r-cran-plogr_0.2.0-3build1_all.deb ... 147s Unpacking r-cran-plogr (0.2.0-3build1) ... 147s Selecting previously unselected package r-cran-cpp11. 147s Preparing to unpack .../169-r-cran-cpp11_0.4.7-1_all.deb ... 147s Unpacking r-cran-cpp11 (0.4.7-1) ... 147s Selecting previously unselected package r-cran-rsqlite. 147s Preparing to unpack .../170-r-cran-rsqlite_2.3.4-1_arm64.deb ... 147s Unpacking r-cran-rsqlite (2.3.4-1) ... 147s Selecting previously unselected package r-cran-curl. 147s Preparing to unpack .../171-r-cran-curl_5.2.0+dfsg-1build1_arm64.deb ... 147s Unpacking r-cran-curl (5.2.0+dfsg-1build1) ... 147s Selecting previously unselected package r-cran-jsonlite. 147s Preparing to unpack .../172-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 147s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 147s Selecting previously unselected package r-cran-mime. 147s Preparing to unpack .../173-r-cran-mime_0.12-1_arm64.deb ... 147s Unpacking r-cran-mime (0.12-1) ... 147s Selecting previously unselected package r-cran-sys. 147s Preparing to unpack .../174-r-cran-sys_3.4.2-1_arm64.deb ... 147s Unpacking r-cran-sys (3.4.2-1) ... 147s Selecting previously unselected package r-cran-askpass. 147s Preparing to unpack .../175-r-cran-askpass_1.2.0-1_arm64.deb ... 147s Unpacking r-cran-askpass (1.2.0-1) ... 147s Selecting previously unselected package r-cran-openssl. 147s Preparing to unpack .../176-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 147s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 147s Selecting previously unselected package r-cran-r6. 147s Preparing to unpack .../177-r-cran-r6_2.5.1-1_all.deb ... 147s Unpacking r-cran-r6 (2.5.1-1) ... 147s Selecting previously unselected package r-cran-httr. 147s Preparing to unpack .../178-r-cran-httr_1.4.7+dfsg-1_all.deb ... 147s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 147s Selecting previously unselected package r-cran-png. 147s Preparing to unpack .../179-r-cran-png_0.1-8-1_arm64.deb ... 147s Unpacking r-cran-png (0.1-8-1) ... 147s Selecting previously unselected package r-bioc-zlibbioc. 147s Preparing to unpack .../180-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 147s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 147s Selecting previously unselected package r-bioc-xvector. 147s Preparing to unpack .../181-r-bioc-xvector_0.42.0-1_arm64.deb ... 147s Unpacking r-bioc-xvector (0.42.0-1) ... 147s Selecting previously unselected package r-cran-bitops. 147s Preparing to unpack .../182-r-cran-bitops_1.0-7-1_arm64.deb ... 147s Unpacking r-cran-bitops (1.0-7-1) ... 147s Selecting previously unselected package r-cran-rcurl. 147s Preparing to unpack .../183-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 147s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 147s Selecting previously unselected package r-bioc-genomeinfodbdata. 147s Preparing to unpack .../184-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 147s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 148s Selecting previously unselected package r-bioc-genomeinfodb. 148s Preparing to unpack .../185-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 148s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 148s Selecting previously unselected package r-cran-crayon. 148s Preparing to unpack .../186-r-cran-crayon_1.5.2-1_all.deb ... 148s Unpacking r-cran-crayon (1.5.2-1) ... 148s Selecting previously unselected package r-bioc-biostrings. 148s Preparing to unpack .../187-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 148s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 148s Selecting previously unselected package r-bioc-keggrest. 148s Preparing to unpack .../188-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 148s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 148s Selecting previously unselected package r-bioc-annotationdbi. 148s Preparing to unpack .../189-r-bioc-annotationdbi_1.64.1-1_all.deb ... 148s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 148s Selecting previously unselected package r-bioc-genomicranges. 148s Preparing to unpack .../190-r-bioc-genomicranges_1.54.1+dfsg-1_arm64.deb ... 148s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 148s Selecting previously unselected package r-cran-lazyeval. 148s Preparing to unpack .../191-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 148s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 148s Selecting previously unselected package r-bioc-annotationfilter. 148s Preparing to unpack .../192-r-bioc-annotationfilter_1.26.0+dfsg-1_all.deb ... 148s Unpacking r-bioc-annotationfilter (1.26.0+dfsg-1) ... 148s Selecting previously unselected package r-cran-generics. 148s Preparing to unpack .../193-r-cran-generics_0.1.3-1_all.deb ... 148s Unpacking r-cran-generics (0.1.3-1) ... 148s Selecting previously unselected package r-cran-magrittr. 148s Preparing to unpack .../194-r-cran-magrittr_2.0.3-1_arm64.deb ... 148s Unpacking r-cran-magrittr (2.0.3-1) ... 148s Selecting previously unselected package r-cran-fansi. 148s Preparing to unpack .../195-r-cran-fansi_1.0.5-1_arm64.deb ... 148s Unpacking r-cran-fansi (1.0.5-1) ... 148s Selecting previously unselected package r-cran-utf8. 148s Preparing to unpack .../196-r-cran-utf8_1.2.4-1_arm64.deb ... 148s Unpacking r-cran-utf8 (1.2.4-1) ... 148s Selecting previously unselected package r-cran-pillar. 148s Preparing to unpack .../197-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 148s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 148s Selecting previously unselected package r-cran-tibble. 148s Preparing to unpack .../198-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 148s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 148s Selecting previously unselected package r-cran-withr. 148s Preparing to unpack .../199-r-cran-withr_2.5.0-1_all.deb ... 148s Unpacking r-cran-withr (2.5.0-1) ... 148s Selecting previously unselected package r-cran-tidyselect. 148s Preparing to unpack .../200-r-cran-tidyselect_1.2.0+dfsg-1_arm64.deb ... 148s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 148s Selecting previously unselected package r-cran-dplyr. 148s Preparing to unpack .../201-r-cran-dplyr_1.1.4-1_arm64.deb ... 148s Unpacking r-cran-dplyr (1.1.4-1) ... 148s Selecting previously unselected package r-cran-purrr. 148s Preparing to unpack .../202-r-cran-purrr_1.0.2-1_arm64.deb ... 148s Unpacking r-cran-purrr (1.0.2-1) ... 148s Selecting previously unselected package r-cran-stringi. 148s Preparing to unpack .../203-r-cran-stringi_1.8.3-1_arm64.deb ... 148s Unpacking r-cran-stringi (1.8.3-1) ... 148s Selecting previously unselected package r-cran-stringr. 148s Preparing to unpack .../204-r-cran-stringr_1.5.1-1_all.deb ... 148s Unpacking r-cran-stringr (1.5.1-1) ... 149s Selecting previously unselected package r-cran-tidyr. 149s Preparing to unpack .../205-r-cran-tidyr_1.3.1-1_arm64.deb ... 149s Unpacking r-cran-tidyr (1.3.1-1) ... 149s Selecting previously unselected package r-cran-dbplyr. 149s Preparing to unpack .../206-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 149s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 149s Selecting previously unselected package r-cran-filelock. 149s Preparing to unpack .../207-r-cran-filelock_1.0.3-1_arm64.deb ... 149s Unpacking r-cran-filelock (1.0.3-1) ... 149s Selecting previously unselected package r-bioc-biocfilecache. 149s Preparing to unpack .../208-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 149s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 149s Selecting previously unselected package r-cran-biocmanager. 149s Preparing to unpack .../209-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 149s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 149s Selecting previously unselected package r-bioc-biocversion. 149s Preparing to unpack .../210-r-bioc-biocversion_3.18.1-1_all.deb ... 149s Unpacking r-bioc-biocversion (3.18.1-1) ... 149s Selecting previously unselected package r-cran-rappdirs. 149s Preparing to unpack .../211-r-cran-rappdirs_0.3.3-1_arm64.deb ... 149s Unpacking r-cran-rappdirs (0.3.3-1) ... 149s Selecting previously unselected package r-cran-yaml. 149s Preparing to unpack .../212-r-cran-yaml_2.3.8-1_arm64.deb ... 149s Unpacking r-cran-yaml (2.3.8-1) ... 149s Selecting previously unselected package r-cran-pkgkitten. 149s Preparing to unpack .../213-r-cran-pkgkitten_0.2.3-1_all.deb ... 149s Unpacking r-cran-pkgkitten (0.2.3-1) ... 149s Selecting previously unselected package r-cran-rcpp. 149s Preparing to unpack .../214-r-cran-rcpp_1.0.12-1_arm64.deb ... 149s Unpacking r-cran-rcpp (1.0.12-1) ... 149s Selecting previously unselected package r-cran-later. 149s Preparing to unpack .../215-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 149s Unpacking r-cran-later (1.3.2+dfsg-1) ... 149s Selecting previously unselected package r-cran-promises. 149s Preparing to unpack .../216-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 149s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 149s Selecting previously unselected package r-cran-httpuv. 149s Preparing to unpack .../217-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 149s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 149s Selecting previously unselected package r-cran-xtable. 149s Preparing to unpack .../218-r-cran-xtable_1%3a1.8-4-2_all.deb ... 149s Unpacking r-cran-xtable (1:1.8-4-2) ... 149s Selecting previously unselected package r-cran-base64enc. 149s Preparing to unpack .../219-r-cran-base64enc_0.1-3-3_arm64.deb ... 149s Unpacking r-cran-base64enc (0.1-3-3) ... 149s Selecting previously unselected package r-cran-digest. 149s Preparing to unpack .../220-r-cran-digest_0.6.34-1_arm64.deb ... 149s Unpacking r-cran-digest (0.6.34-1) ... 149s Selecting previously unselected package r-cran-ellipsis. 149s Preparing to unpack .../221-r-cran-ellipsis_0.3.2-2_arm64.deb ... 149s Unpacking r-cran-ellipsis (0.3.2-2) ... 149s Selecting previously unselected package r-cran-htmltools. 149s Preparing to unpack .../222-r-cran-htmltools_0.5.7-1_arm64.deb ... 149s Unpacking r-cran-htmltools (0.5.7-1) ... 149s Selecting previously unselected package r-cran-fontawesome. 149s Preparing to unpack .../223-r-cran-fontawesome_0.5.2-1_all.deb ... 149s Unpacking r-cran-fontawesome (0.5.2-1) ... 149s Selecting previously unselected package r-cran-sourcetools. 149s Preparing to unpack .../224-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 149s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 149s Selecting previously unselected package r-cran-commonmark. 149s Preparing to unpack .../225-r-cran-commonmark_1.9.1-1_arm64.deb ... 149s Unpacking r-cran-commonmark (1.9.1-1) ... 149s Selecting previously unselected package r-cran-jquerylib. 150s Preparing to unpack .../226-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 150s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 150s Selecting previously unselected package r-cran-fs. 150s Preparing to unpack .../227-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 150s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 150s Selecting previously unselected package r-cran-sass. 150s Preparing to unpack .../228-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 150s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 150s Selecting previously unselected package r-cran-bslib. 150s Preparing to unpack .../229-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 150s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 150s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 150s Preparing to unpack .../230-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 150s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 150s Selecting previously unselected package r-cran-shiny. 150s Preparing to unpack .../231-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 150s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 150s Selecting previously unselected package r-cran-evaluate. 150s Preparing to unpack .../232-r-cran-evaluate_0.23-1_all.deb ... 150s Unpacking r-cran-evaluate (0.23-1) ... 150s Selecting previously unselected package r-cran-xfun. 150s Preparing to unpack .../233-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 150s Unpacking r-cran-xfun (0.41+dfsg-1) ... 150s Selecting previously unselected package r-cran-highr. 150s Preparing to unpack .../234-r-cran-highr_0.10+dfsg-1_all.deb ... 150s Unpacking r-cran-highr (0.10+dfsg-1) ... 150s Selecting previously unselected package libjs-mathjax. 150s Preparing to unpack .../235-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 150s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 151s Selecting previously unselected package r-cran-knitr. 151s Preparing to unpack .../236-r-cran-knitr_1.45+dfsg-1_all.deb ... 151s Unpacking r-cran-knitr (1.45+dfsg-1) ... 151s Selecting previously unselected package r-cran-tinytex. 151s Preparing to unpack .../237-r-cran-tinytex_0.49-1_all.deb ... 151s Unpacking r-cran-tinytex (0.49-1) ... 151s Selecting previously unselected package libjs-modernizr. 151s Preparing to unpack .../238-libjs-modernizr_2.6.2+ds1-5_all.deb ... 151s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 151s Selecting previously unselected package r-cran-rmarkdown. 151s Preparing to unpack .../239-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 151s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 151s Selecting previously unselected package r-cran-htmlwidgets. 151s Preparing to unpack .../240-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 151s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 151s Selecting previously unselected package r-cran-crosstalk. 151s Preparing to unpack .../241-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 151s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 151s Selecting previously unselected package r-cran-dt. 151s Preparing to unpack .../242-r-cran-dt_0.31+dfsg-1_all.deb ... 151s Unpacking r-cran-dt (0.31+dfsg-1) ... 151s Selecting previously unselected package r-bioc-interactivedisplaybase. 151s Preparing to unpack .../243-r-bioc-interactivedisplaybase_1.40.0+dfsg-1_all.deb ... 151s Unpacking r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 151s Selecting previously unselected package r-bioc-annotationhub. 151s Preparing to unpack .../244-r-bioc-annotationhub_3.10.0+dfsg-1_all.deb ... 151s Unpacking r-bioc-annotationhub (3.10.0+dfsg-1) ... 151s Selecting previously unselected package r-bioc-biocio. 151s Preparing to unpack .../245-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 151s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 151s Selecting previously unselected package r-cran-formatr. 151s Preparing to unpack .../246-r-cran-formatr_1.14-1_all.deb ... 151s Unpacking r-cran-formatr (1.14-1) ... 151s Selecting previously unselected package r-cran-lambda.r. 151s Preparing to unpack .../247-r-cran-lambda.r_1.2.4-2build1_all.deb ... 151s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 151s Selecting previously unselected package r-cran-futile.options. 151s Preparing to unpack .../248-r-cran-futile.options_1.0.1-3build1_all.deb ... 151s Unpacking r-cran-futile.options (1.0.1-3build1) ... 151s Selecting previously unselected package r-cran-futile.logger. 151s Preparing to unpack .../249-r-cran-futile.logger_1.4.3-4build1_all.deb ... 151s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 151s Selecting previously unselected package r-cran-snow. 151s Preparing to unpack .../250-r-cran-snow_1%3a0.4.4-2_all.deb ... 151s Unpacking r-cran-snow (1:0.4.4-2) ... 151s Selecting previously unselected package r-cran-codetools. 151s Preparing to unpack .../251-r-cran-codetools_0.2-19-1_all.deb ... 151s Unpacking r-cran-codetools (0.2-19-1) ... 151s Selecting previously unselected package r-cran-bh. 151s Preparing to unpack .../252-r-cran-bh_1.84.0-1_all.deb ... 151s Unpacking r-cran-bh (1.84.0-1) ... 151s Selecting previously unselected package r-bioc-biocparallel. 151s Preparing to unpack .../253-r-bioc-biocparallel_1.36.0-1_arm64.deb ... 151s Unpacking r-bioc-biocparallel (1.36.0-1) ... 151s Selecting previously unselected package r-cran-bookdown. 151s Preparing to unpack .../254-r-cran-bookdown_0.37+dfsg-1_all.deb ... 151s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 152s Selecting previously unselected package tex-common. 152s Preparing to unpack .../255-tex-common_6.18_all.deb ... 152s Unpacking tex-common (6.18) ... 152s Selecting previously unselected package t1utils. 152s Preparing to unpack .../256-t1utils_1.41-4build2_arm64.deb ... 152s Unpacking t1utils (1.41-4build2) ... 152s Selecting previously unselected package texlive-binaries. 152s Preparing to unpack .../257-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 152s Unpacking texlive-binaries (2023.20230311.66589-9) ... 152s Selecting previously unselected package texlive-base. 152s Preparing to unpack .../258-texlive-base_2023.20240207-1_all.deb ... 152s Unpacking texlive-base (2023.20240207-1) ... 153s Selecting previously unselected package texlive-latex-base. 153s Preparing to unpack .../259-texlive-latex-base_2023.20240207-1_all.deb ... 153s Unpacking texlive-latex-base (2023.20240207-1) ... 153s Selecting previously unselected package texlive-bibtex-extra. 153s Preparing to unpack .../260-texlive-bibtex-extra_2023.20240207-1_all.deb ... 153s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 156s Selecting previously unselected package r-bioc-biocstyle. 156s Preparing to unpack .../261-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 156s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 156s Selecting previously unselected package r-cran-xml. 156s Preparing to unpack .../262-r-cran-xml_3.99-0.16.1-1_arm64.deb ... 156s Unpacking r-cran-xml (3.99-0.16.1-1) ... 156s Selecting previously unselected package r-cran-hms. 156s Preparing to unpack .../263-r-cran-hms_1.1.3-1_all.deb ... 156s Unpacking r-cran-hms (1.1.3-1) ... 156s Selecting previously unselected package r-cran-prettyunits. 156s Preparing to unpack .../264-r-cran-prettyunits_1.2.0-1_all.deb ... 156s Unpacking r-cran-prettyunits (1.2.0-1) ... 156s Selecting previously unselected package r-cran-progress. 156s Preparing to unpack .../265-r-cran-progress_1.2.3-1_all.deb ... 156s Unpacking r-cran-progress (1.2.3-1) ... 156s Selecting previously unselected package r-cran-xml2. 156s Preparing to unpack .../266-r-cran-xml2_1.3.6-1_arm64.deb ... 156s Unpacking r-cran-xml2 (1.3.6-1) ... 156s Selecting previously unselected package r-bioc-biomart. 156s Preparing to unpack .../267-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 156s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 156s Selecting previously unselected package r-bioc-rhtslib. 156s Preparing to unpack .../268-r-bioc-rhtslib_2.4.1+dfsg-1_arm64.deb ... 156s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 156s Selecting previously unselected package r-bioc-rsamtools. 156s Preparing to unpack .../269-r-bioc-rsamtools_2.18.0+dfsg-1_arm64.deb ... 156s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 156s Selecting previously unselected package r-cran-matrixstats. 156s Preparing to unpack .../270-r-cran-matrixstats_1.2.0-1_arm64.deb ... 156s Unpacking r-cran-matrixstats (1.2.0-1) ... 156s Selecting previously unselected package r-bioc-matrixgenerics. 156s Preparing to unpack .../271-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 156s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 156s Selecting previously unselected package r-cran-lattice. 156s Preparing to unpack .../272-r-cran-lattice_0.22-5-1_arm64.deb ... 156s Unpacking r-cran-lattice (0.22-5-1) ... 156s Selecting previously unselected package r-cran-matrix. 156s Preparing to unpack .../273-r-cran-matrix_1.6-5-1_arm64.deb ... 156s Unpacking r-cran-matrix (1.6-5-1) ... 156s Selecting previously unselected package r-cran-abind. 157s Preparing to unpack .../274-r-cran-abind_1.4-5-2_all.deb ... 157s Unpacking r-cran-abind (1.4-5-2) ... 157s Selecting previously unselected package r-bioc-s4arrays. 157s Preparing to unpack .../275-r-bioc-s4arrays_1.2.0+dfsg-1_arm64.deb ... 157s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 157s Selecting previously unselected package r-bioc-sparsearray. 157s Preparing to unpack .../276-r-bioc-sparsearray_1.2.4+dfsg-1_arm64.deb ... 157s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 157s Selecting previously unselected package r-bioc-delayedarray. 157s Preparing to unpack .../277-r-bioc-delayedarray_0.28.0+dfsg-1_arm64.deb ... 157s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 157s Selecting previously unselected package r-bioc-summarizedexperiment. 157s Preparing to unpack .../278-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 157s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 157s Selecting previously unselected package r-bioc-genomicalignments. 157s Preparing to unpack .../279-r-bioc-genomicalignments_1.38.2-1_arm64.deb ... 157s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 157s Selecting previously unselected package r-cran-rjson. 157s Preparing to unpack .../280-r-cran-rjson_0.2.21-1_arm64.deb ... 157s Unpacking r-cran-rjson (0.2.21-1) ... 157s Selecting previously unselected package r-cran-restfulr. 157s Preparing to unpack .../281-r-cran-restfulr_0.0.15-1_arm64.deb ... 157s Unpacking r-cran-restfulr (0.0.15-1) ... 157s Selecting previously unselected package r-bioc-rtracklayer. 157s Preparing to unpack .../282-r-bioc-rtracklayer_1.62.0-1_arm64.deb ... 157s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 157s Selecting previously unselected package r-bioc-bsgenome. 157s Preparing to unpack .../283-r-bioc-bsgenome_1.70.2-1_all.deb ... 157s Unpacking r-bioc-bsgenome (1.70.2-1) ... 157s Selecting previously unselected package r-bioc-genomicfeatures. 157s Preparing to unpack .../284-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 157s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 157s Selecting previously unselected package r-bioc-protgenerics. 157s Preparing to unpack .../285-r-bioc-protgenerics_1.34.0-1_all.deb ... 157s Unpacking r-bioc-protgenerics (1.34.0-1) ... 157s Selecting previously unselected package r-bioc-ensembldb. 157s Preparing to unpack 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(2.10.1+dfsg-1) ... 163s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 163s Setting up r-bioc-annotationdbi (1.64.1-1) ... 163s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 163s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 163s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 163s Setting up r-bioc-genomicalignments (1.38.2-1) ... 163s Setting up r-cran-bookdown (0.37+dfsg-1) ... 163s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 163s Setting up r-bioc-rtracklayer (1.62.0-1) ... 163s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 163s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 163s Setting up r-bioc-bsgenome (1.70.2-1) ... 163s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 163s Setting up r-bioc-ensembldb (2.26.0+dfsg-1) ... 163s Setting up r-cran-dt (0.31+dfsg-1) ... 163s Setting up r-bioc-variantannotation (1.48.1-1) ... 163s Setting up r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 163s Setting up r-bioc-annotationhub (3.10.0+dfsg-1) ... 163s Setting up r-bioc-experimenthub (2.10.0+ds-1) ... 163s Setting up autopkgtest-satdep (0) ... 163s Processing triggers for man-db (2.12.0-3) ... 164s Processing triggers for install-info (7.1-3) ... 164s Processing triggers for libc-bin (2.39-0ubuntu2) ... 164s Processing triggers for tex-common (6.18) ... 165s Running updmap-sys. This may take some time... done. 165s Running mktexlsr /var/lib/texmf ... done. 165s Building format(s) --all. 200s This may take some time... done. 211s (Reading database ... 125065 files and directories currently installed.) 211s Removing autopkgtest-satdep (0) ... 212s autopkgtest [21:45:39]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 212s autopkgtest [21:45:39]: test pkg-r-autopkgtest: [----------------------- 212s Test: Try to load the R library AnnotationHub 212s 212s R version 4.3.2 (2023-10-31) -- "Eye Holes" 212s Copyright (C) 2023 The R Foundation for Statistical Computing 212s Platform: aarch64-unknown-linux-gnu (64-bit) 212s 212s R is free software and comes with ABSOLUTELY NO WARRANTY. 212s You are welcome to redistribute it under certain conditions. 212s Type 'license()' or 'licence()' for distribution details. 212s 212s R is a collaborative project with many contributors. 212s Type 'contributors()' for more information and 212s 'citation()' on how to cite R or R packages in publications. 212s 212s Type 'demo()' for some demos, 'help()' for on-line help, or 212s 'help.start()' for an HTML browser interface to help. 212s Type 'q()' to quit R. 212s 212s > library('AnnotationHub') 212s Loading required package: BiocGenerics 212s 212s Attaching package: ‘BiocGenerics’ 212s 212s The following objects are masked from ‘package:stats’: 212s 212s IQR, mad, sd, var, xtabs 212s 212s The following objects are masked from ‘package:base’: 212s 212s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 212s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 212s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 212s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 212s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 212s table, tapply, union, unique, unsplit, which.max, which.min 212s 212s Loading required package: BiocFileCache 212s Loading required package: dbplyr 216s > 216s > 217s Other tests are currently unsupported! 217s They will be progressively added. 217s autopkgtest [21:45:44]: test pkg-r-autopkgtest: -----------------------] 218s pkg-r-autopkgtest PASS 218s autopkgtest [21:45:45]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 218s autopkgtest [21:45:45]: @@@@@@@@@@@@@@@@@@@@ summary 218s pkg-r-autopkgtest PASS 229s Creating nova instance adt-noble-arm64-r-bioc-annotationhub-20240316-214207-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240314.img (UUID 7faf5f09-d335-4346-a441-4eab2f9c04fe)...