0s autopkgtest [17:20:05]: starting date and time: 2024-03-16 17:20:05+0000 0s autopkgtest [17:20:05]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:20:05]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.21j7p5dp/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:curl,src:glib2.0,src:libpng1.6,src:libpsl,src:libtirpc,src:libxt,src:openssl,src:orthanc-python,src:readline,src:wp2latex --apt-upgrade r-bioc-annotationdbi --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 curl/8.5.0-2ubuntu7 glib2.0/2.79.3-3ubuntu5 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 libtirpc/1.3.4+ds-1.1 libxt/1:1.2.1-1.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 readline/8.2-3.1 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-arm64-4.secgroup --name adt-noble-arm64-r-bioc-annotationdbi-20240316-172004-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 188s autopkgtest [17:23:13]: testbed dpkg architecture: arm64 188s autopkgtest [17:23:13]: testbed apt version: 2.7.12 188s autopkgtest [17:23:13]: @@@@@@@@@@@@@@@@@@@@ test bed setup 189s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 190s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 190s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 190s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3673 kB] 191s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 191s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [646 kB] 191s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 191s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 191s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 191s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3994 kB] 191s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 191s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.6 kB] 192s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 202s Fetched 9063 kB in 5s (1766 kB/s) 203s Reading package lists... 209s Reading package lists... 210s Building dependency tree... 210s Reading state information... 211s Calculating upgrade... 213s The following packages will be REMOVED: 213s libglib2.0-0 libssl3 213s The following NEW packages will be installed: 213s libglib2.0-0t64 libssl3t64 xdg-user-dirs 213s The following packages have been kept back: 213s curl 213s The following packages will be upgraded: 213s gir1.2-glib-2.0 libglib2.0-data libtirpc-common openssl readline-common 213s 5 upgraded, 3 newly installed, 2 to remove and 1 not upgraded. 213s Need to get 4592 kB of archives. 213s After this operation, 211 kB of additional disk space will be used. 213s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 gir1.2-glib-2.0 arm64 2.79.3-3ubuntu5 [182 kB] 213s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-0t64 arm64 2.79.3-3ubuntu5 [1527 kB] 214s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 214s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 214s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 214s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 214s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 214s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-user-dirs arm64 0.18-1 [18.1 kB] 215s Fetched 4592 kB in 1s (5562 kB/s) 215s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 215s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_arm64.deb ... 215s Unpacking gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 216s dpkg: libglib2.0-0:arm64: dependency problems, but removing anyway as you requested: 216s udisks2 depends on libglib2.0-0 (>= 2.77.0). 216s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 216s python3-gi depends on libglib2.0-0 (>= 2.77.0). 216s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 216s netplan.io depends on libglib2.0-0 (>= 2.70.0). 216s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 216s libxmlb2:arm64 depends on libglib2.0-0 (>= 2.54.0). 216s libvolume-key1:arm64 depends on libglib2.0-0 (>= 2.18.0). 216s libudisks2-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 216s libqrtr-glib0:arm64 depends on libglib2.0-0 (>= 2.56). 216s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 216s libqmi-glib5:arm64 depends on libglib2.0-0 (>= 2.54.0). 216s libpolkit-gobject-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 216s libpolkit-agent-1-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 216s libnetplan0:arm64 depends on libglib2.0-0 (>= 2.75.3). 216s libmm-glib0:arm64 depends on libglib2.0-0 (>= 2.62.0). 216s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 216s libmbim-glib4:arm64 depends on libglib2.0-0 (>= 2.56). 216s libjson-glib-1.0-0:arm64 depends on libglib2.0-0 (>= 2.75.3). 216s libjcat1:arm64 depends on libglib2.0-0 (>= 2.75.3). 216s libgusb2:arm64 depends on libglib2.0-0 (>= 2.75.3). 216s libgudev-1.0-0:arm64 depends on libglib2.0-0 (>= 2.38.0). 216s libgirepository-1.0-1:arm64 depends on libglib2.0-0 (>= 2.79.0). 216s libfwupd2:arm64 depends on libglib2.0-0 (>= 2.79.0). 216s libblockdev3:arm64 depends on libglib2.0-0 (>= 2.42.2). 216s libblockdev-utils3:arm64 depends on libglib2.0-0 (>= 2.75.3). 216s libblockdev-swap3:arm64 depends on libglib2.0-0 (>= 2.42.2). 216s libblockdev-part3:arm64 depends on libglib2.0-0 (>= 2.42.2). 216s libblockdev-nvme3:arm64 depends on libglib2.0-0 (>= 2.42.2). 216s libblockdev-mdraid3:arm64 depends on libglib2.0-0 (>= 2.42.2). 216s libblockdev-loop3:arm64 depends on libglib2.0-0 (>= 2.42.2). 216s libblockdev-fs3:arm64 depends on libglib2.0-0 (>= 2.42.2). 216s libblockdev-crypto3:arm64 depends on libglib2.0-0 (>= 2.42.2). 216s fwupd depends on libglib2.0-0 (>= 2.79.0). 216s bolt depends on libglib2.0-0 (>= 2.56.0). 216s 216s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 216s Removing libglib2.0-0:arm64 (2.79.2-1~ubuntu1) ... 216s Selecting previously unselected package libglib2.0-0t64:arm64. 216s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75825 files and directories currently installed.) 216s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_arm64.deb ... 216s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:arm64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 216s removed '/var/lib/dpkg/info/libglib2.0-0:arm64.postrm' 216s Unpacking libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 216s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 216s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 217s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 217s wget depends on libssl3 (>= 3.0.0). 217s u-boot-tools depends on libssl3 (>= 3.0.0). 217s tnftp depends on libssl3 (>= 3.0.0). 217s tcpdump depends on libssl3 (>= 3.0.0). 217s systemd-resolved depends on libssl3 (>= 3.0.0). 217s systemd depends on libssl3 (>= 3.0.0). 217s sudo depends on libssl3 (>= 3.0.0). 217s sbsigntool depends on libssl3 (>= 3.0.0). 217s rsync depends on libssl3 (>= 3.0.0). 217s python3-cryptography depends on libssl3 (>= 3.0.0). 217s openssh-server depends on libssl3 (>= 3.0.10). 217s openssh-client depends on libssl3 (>= 3.0.10). 217s mtd-utils depends on libssl3 (>= 3.0.0). 217s mokutil depends on libssl3 (>= 3.0.0). 217s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 217s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 217s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 217s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 217s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 217s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 217s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 217s libnvme1 depends on libssl3 (>= 3.0.0). 217s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 217s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 217s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 217s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 217s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 217s kmod depends on libssl3 (>= 3.0.0). 217s dhcpcd-base depends on libssl3 (>= 3.0.0). 217s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 217s 217s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 217s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 217s Selecting previously unselected package libssl3t64:arm64. 217s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75839 files and directories currently installed.) 217s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 217s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 217s Preparing to unpack .../libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 217s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 218s Preparing to unpack .../libtirpc-common_1.3.4+ds-1.1_all.deb ... 218s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 218s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 218s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 218s Selecting previously unselected package xdg-user-dirs. 218s Preparing to unpack .../xdg-user-dirs_0.18-1_arm64.deb ... 218s Unpacking xdg-user-dirs (0.18-1) ... 218s Setting up xdg-user-dirs (0.18-1) ... 218s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 218s Setting up libtirpc-common (1.3.4+ds-1.1) ... 218s Setting up libglib2.0-0t64:arm64 (2.79.3-3ubuntu5) ... 218s No schema files found: doing nothing. 218s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 218s Setting up gir1.2-glib-2.0:arm64 (2.79.3-3ubuntu5) ... 218s Setting up openssl (3.0.13-0ubuntu1) ... 218s Setting up readline-common (8.2-3.1) ... 218s Processing triggers for man-db (2.12.0-3) ... 219s Processing triggers for install-info (7.1-3) ... 220s Processing triggers for libc-bin (2.39-0ubuntu2) ... 221s Reading package lists... 221s Building dependency tree... 221s Reading state information... 223s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 224s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 224s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 224s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 224s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 229s Reading package lists... 229s Reading package lists... 230s Building dependency tree... 230s Reading state information... 232s Calculating upgrade... 233s The following packages have been kept back: 233s curl 233s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 233s Reading package lists... 233s Building dependency tree... 233s Reading state information... 235s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 239s autopkgtest [17:24:04]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 239s autopkgtest [17:24:04]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-annotationdbi 243s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-annotationdbi 1.64.1-1 (dsc) [2254 B] 243s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-annotationdbi 1.64.1-1 (tar) [4360 kB] 243s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-annotationdbi 1.64.1-1 (diff) [11.9 kB] 244s gpgv: Signature made Thu Nov 30 13:02:58 2023 UTC 244s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 244s gpgv: issuer "tille@debian.org" 244s gpgv: Can't check signature: No public key 244s dpkg-source: warning: cannot verify inline signature for ./r-bioc-annotationdbi_1.64.1-1.dsc: no acceptable signature found 244s autopkgtest [17:24:09]: testing package r-bioc-annotationdbi version 1.64.1-1 245s autopkgtest [17:24:10]: build not needed 250s autopkgtest [17:24:15]: test pkg-r-autopkgtest: preparing testbed 255s Reading package lists... 255s Building dependency tree... 255s Reading state information... 256s Starting pkgProblemResolver with broken count: 0 257s Starting 2 pkgProblemResolver with broken count: 0 257s Done 259s The following additional packages will be installed: 259s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 259s curl dctrl-tools fontconfig fontconfig-config fonts-dejavu-core 259s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 259s fonts-lmodern fonts-mathjax g++ g++-13 g++-13-aarch64-linux-gnu 259s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 259s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 259s gfortran-aarch64-linux-gnu icu-devtools javascript-common libasan8 259s libatomic1 libbibtex-parser-perl libblas-dev libblas3 libbz2-dev 259s libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 259s libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev 259s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 259s libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 259s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 259s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 259s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 259s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 259s libjs-popper.js libjs-prettify libjs-sifter.js 259s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 259s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 259s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 259s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 259s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 259s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 259s libreadline8t64 libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 259s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 259s libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 259s libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 259s libzzip-0-13 linux-libc-dev littler node-bootstrap-sass node-html5shiv 259s node-normalize.css pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf 259s pkgconf-bin r-base-core r-base-dev r-bioc-annotationdbi r-bioc-biobase 259s r-bioc-biocgenerics r-bioc-biocstyle r-bioc-biostrings r-bioc-genomeinfodb 259s r-bioc-genomeinfodbdata r-bioc-go.db r-bioc-graph r-bioc-iranges 259s r-bioc-keggrest r-bioc-org.hs.eg.db r-bioc-s4vectors r-bioc-xvector 259s r-bioc-zlibbioc r-cran-askpass r-cran-base64enc r-cran-biocmanager 259s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown 259s r-cran-bslib r-cran-cachem r-cran-cli r-cran-commonmark r-cran-cpp11 259s r-cran-crayon r-cran-curl r-cran-dbi r-cran-digest r-cran-ellipsis 259s r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-glue 259s r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib 259s r-cran-jsonlite r-cran-knitr r-cran-later r-cran-lifecycle r-cran-littler 259s r-cran-magrittr r-cran-memoise r-cran-mime r-cran-openssl r-cran-pkgconfig 259s r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-promises r-cran-r6 259s r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-rmarkdown 259s r-cran-rsqlite r-cran-runit r-cran-sass r-cran-shiny r-cran-sourcetools 259s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tinytex r-cran-vctrs 259s r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml rpcsvc-proto t1utils 259s tex-common texlive-base texlive-bibtex-extra texlive-binaries 259s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 259s Suggested packages: 259s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 259s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 259s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev apache2 259s | lighttpd | httpd liblapack-doc glibc-doc icu-doc libjs-jquery-ui-docs 259s fonts-mathjax-extras fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc 259s readline-doc libstdc++-13-doc tcl8.6 tk8.6 nodejs texlive-latex-recommended 259s texlive-xetex texlive-luatex pandoc-citeproc texlive-latex-extra context 259s wkhtmltopdf librsvg2-bin groff ghc php python ruby libjs-katex 259s citation-style-language-styles elpa-ess r-doc-info | r-doc-pdf r-mathlib 259s r-base-html texlive-plain-generic texlive-fonts-recommended 259s texlive-fonts-extra texlive-extra-utils texinfo r-bioc-all 259s r-bioc-genomicranges r-bioc-delayedarray r-bioc-rsamtools r-bioc-affy 259s r-bioc-deseq2 r-bioc-annotate r-bioc-bsgenome r-bioc-genomicfeatures 259s r-cran-r.utils r-cran-data.table r-bioc-genomicalignments r-cran-sparsem 259s r-cran-xml r-bioc-rbgl r-cran-cluster r-cran-markdown 259s r-bioc-summarizedexperiment r-cran-matrix r-bioc-shortread r-cran-testthat 259s r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-pillar r-cran-rstudioapi 259s r-cran-rmysql r-cran-getopt r-cran-inline r-cran-spelling r-cran-callr 259s r-cran-plm r-cran-zoo r-cran-survival debhelper ghostscript gv 259s | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-binaries-sse2 259s hintview texlive-latex-base-doc wp2latex 259s Recommended packages: 259s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 259s r-recommended r-doc-html r-cran-testthat r-bioc-biocversion r-cran-remotes 259s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 259s r-cran-rsconnect r-cran-tibble r-cran-testit r-cran-tufte r-cran-xml2 259s r-cran-webshot r-cran-ggplot2 r-cran-thematic r-cran-callr r-cran-covr 259s r-cran-mockery r-cran-processx r-cran-ps r-cran-rprojroot r-cran-whoami 259s r-cran-bench r-cran-brio r-cran-decor r-cran-desc r-cran-lobstr 259s r-cran-progress r-cran-scales r-cran-spelling r-cran-webutils r-cran-lattice 259s r-cran-dplyr r-cran-rsvg r-cran-pillar r-cran-waldo r-cran-cairo 259s r-cran-markdown r-cran-ragg r-cran-jpeg r-cran-readr r-cran-r.rsp r-cran-sf 259s r-cran-codetools r-cran-formatr r-cran-gridsvg r-cran-magick 259s r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-svglite 259s node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-sodium r-cran-future 259s r-cran-purrr r-cran-xml r-cran-usethis r-cran-dygraphs r-cran-dbitest 259s r-cran-gert r-cran-gh r-cran-hms r-cran-rvest r-cran-generics r-cran-pkgdown 259s r-cran-zeallot r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl 259s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 259s The following packages will be REMOVED: 259s libcurl4 libpng16-16 libpsl5 libreadline8 libtirpc3 259s The following NEW packages will be installed: 259s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 259s cpp-aarch64-linux-gnu dctrl-tools fontconfig fontconfig-config 259s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 259s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 259s g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 259s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 259s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 259s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 259s libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 259s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 259s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 259s libhwasan0 libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 259s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 259s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 259s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 259s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 259s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 259s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 259s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 259s libncurses-dev libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 259s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 259s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 259s libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev 259s libreadline8t64 libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 259s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 259s libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 259s libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 259s libzzip-0-13 linux-libc-dev littler node-bootstrap-sass node-html5shiv 259s node-normalize.css pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf 259s pkgconf-bin r-base-core r-base-dev r-bioc-annotationdbi r-bioc-biobase 259s r-bioc-biocgenerics r-bioc-biocstyle r-bioc-biostrings r-bioc-genomeinfodb 259s r-bioc-genomeinfodbdata r-bioc-go.db r-bioc-graph r-bioc-iranges 259s r-bioc-keggrest r-bioc-org.hs.eg.db r-bioc-s4vectors r-bioc-xvector 259s r-bioc-zlibbioc r-cran-askpass r-cran-base64enc r-cran-biocmanager 259s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown 259s r-cran-bslib r-cran-cachem r-cran-cli r-cran-commonmark r-cran-cpp11 259s r-cran-crayon r-cran-curl r-cran-dbi r-cran-digest r-cran-ellipsis 259s r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-glue 259s r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib 259s r-cran-jsonlite r-cran-knitr r-cran-later r-cran-lifecycle r-cran-littler 259s r-cran-magrittr r-cran-memoise r-cran-mime r-cran-openssl r-cran-pkgconfig 259s r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-promises r-cran-r6 259s r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-rmarkdown 259s r-cran-rsqlite r-cran-runit r-cran-sass r-cran-shiny r-cran-sourcetools 259s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tinytex r-cran-vctrs 259s r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml rpcsvc-proto t1utils 259s tex-common texlive-base texlive-bibtex-extra texlive-binaries 259s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 259s The following packages will be upgraded: 259s curl 259s 1 upgraded, 238 newly installed, 5 to remove and 0 not upgraded. 259s Need to get 446 MB/446 MB of archives. 259s After this operation, 1574 MB of additional disk space will be used. 259s Get:1 /tmp/autopkgtest.1XwbGw/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [772 B] 259s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpsl5t64 arm64 0.21.2-1.1 [57.4 kB] 260s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 curl arm64 8.5.0-2ubuntu7 [222 kB] 260s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libcurl4t64 arm64 8.5.0-2ubuntu7 [332 kB] 260s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng16-16t64 arm64 1.6.43-3 [185 kB] 260s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 260s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.1 [83.5 kB] 260s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 260s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 261s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 261s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libtirpc-dev arm64 1.3.4+ds-1.1 [201 kB] 261s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 261s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 261s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 261s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 261s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 261s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB] 263s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B] 263s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 263s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 263s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 263s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 263s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 263s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 263s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 263s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 263s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 263s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 263s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 263s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB] 264s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB] 265s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB] 265s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 265s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 265s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB] 265s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB] 265s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB] 265s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 265s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 265s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 265s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB] 265s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 265s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 265s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 265s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 266s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB] 266s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 266s Get:48 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 266s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 266s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 266s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 266s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran-13-dev arm64 13.2.0-17ubuntu2 [478 kB] 266s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.8 MB] 267s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-13 arm64 13.2.0-17ubuntu2 [10.3 kB] 267s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 267s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 267s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 icu-devtools arm64 74.2-1ubuntu1 [209 kB] 267s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B] 267s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 267s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 liblatex-tounicode-perl all 0.54-2 [29.0 kB] 267s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 267s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 267s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libblas-dev arm64 3.12.0-3 [111 kB] 267s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libbz2-dev arm64 1.0.8-5ubuntu1 [35.8 kB] 267s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 267s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 267s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 267s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 267s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 267s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB] 267s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 267s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 267s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 267s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 267s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 267s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 libicu-dev arm64 74.2-1ubuntu1 [11.9 MB] 268s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 268s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu1 [304 kB] 268s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 268s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 268s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 268s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 268s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 268s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 268s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 268s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 268s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 268s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 268s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 268s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 268s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 268s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 268s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 268s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 268s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 268s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 268s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libkpathsea6 arm64 2023.20230311.66589-9 [62.7 kB] 268s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 268s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack-dev arm64 3.12.0-3 [4293 kB] 268s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 268s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB] 268s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libncurses-dev arm64 6.4+20240113-1ubuntu1 [385 kB] 268s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB] 269s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB] 269s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB] 269s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB] 269s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB] 269s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB] 269s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B] 269s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB] 269s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB] 269s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B] 269s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB] 269s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB] 269s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 270s Get:116 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpng-dev arm64 1.6.43-3 [267 kB] 270s Get:117 http://ftpmaster.internal/ubuntu noble/universe arm64 libpotrace0 arm64 1.16-2 [15.2 kB] 270s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libptexenc1 arm64 2023.20230311.66589-9 [40.0 kB] 270s Get:119 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline-dev arm64 8.2-3.1 [177 kB] 270s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 270s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 270s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libsynctex2 arm64 2023.20230311.66589-9 [59.1 kB] 270s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 270s Get:124 http://ftpmaster.internal/ubuntu noble/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 270s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libtexlua53-5 arm64 2023.20230311.66589-9 [120 kB] 270s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 270s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 270s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 270s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 270s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 270s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 270s Get:132 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [168 kB] 270s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB] 270s Get:134 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB] 270s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB] 270s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libxi6 arm64 2:1.8.1-1 [31.9 kB] 270s Get:137 http://ftpmaster.internal/ubuntu noble/universe arm64 libzzip-0-13 arm64 0.13.72+dfsg.1-1.1 [26.6 kB] 270s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB] 270s Get:139 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB] 270s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 270s Get:141 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-core arm64 4.3.3-2build1 [26.8 MB] 273s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-littler arm64 0.3.19-1 [93.4 kB] 273s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 littler all 0.3.19-1 [2472 B] 273s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 273s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 273s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 273s Get:147 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc-data all 3.1.3-1 [92.4 kB] 273s Get:148 http://ftpmaster.internal/ubuntu noble/universe arm64 pandoc arm64 3.1.3+ds-2 [27.7 MB] 274s Get:149 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB] 274s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB] 274s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B] 274s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 liblzma-dev arm64 5.4.5-0.3 [209 kB] 274s Get:153 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 r-base-dev all 4.3.3-2build1 [4334 B] 274s Get:154 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 274s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 274s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biobase arm64 2.62.0-1 [2136 kB] 274s Get:157 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-s4vectors arm64 0.40.2+dfsg-1 [2055 kB] 274s Get:158 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-iranges arm64 2.36.0-1 [2250 kB] 274s Get:159 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-dbi all 1.2.2-1 [823 kB] 274s Get:160 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit arm64 4.0.5-1 [1057 kB] 274s Get:161 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bit64 arm64 4.0.5-1 [467 kB] 274s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rlang arm64 1.1.3-1 [1663 kB] 274s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 274s Get:164 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 274s Get:165 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 275s Get:166 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 275s Get:167 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 275s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fastmap arm64 1.1.1-1 [69.6 kB] 275s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cachem arm64 1.0.8-1 [72.3 kB] 275s Get:170 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 275s Get:171 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 275s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 275s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-cpp11 all 0.4.7-1 [266 kB] 275s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rsqlite arm64 2.3.4-1 [1371 kB] 275s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-curl arm64 5.2.0+dfsg-1 [189 kB] 275s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 275s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-mime arm64 0.12-1 [35.8 kB] 275s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 275s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 275s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2 [402 kB] 275s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 275s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 275s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-png arm64 0.1-8-1 [39.9 kB] 275s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 275s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-xvector arm64 0.42.0-1 [620 kB] 275s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bitops arm64 1.0-7-1 [29.5 kB] 275s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcurl arm64 1.98-1.14+dfsg-1 [793 kB] 275s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 275s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 276s Get:190 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 276s Get:191 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biostrings arm64 2.70.2+dfsg-1 [13.6 MB] 276s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 276s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 276s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 276s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-digest arm64 0.6.34-1 [182 kB] 276s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB] 276s Get:197 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-htmltools arm64 0.5.7-1 [369 kB] 276s Get:198 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 276s Get:199 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xfun arm64 0.41+dfsg-1 [415 kB] 277s Get:200 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-highr all 0.10+dfsg-1 [38.3 kB] 277s Get:201 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-yaml arm64 2.3.8-1 [107 kB] 277s Get:202 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 277s Get:203 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-knitr all 1.45+dfsg-1 [917 kB] 277s Get:204 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 277s Get:205 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fs arm64 1.6.3+dfsg-1 [227 kB] 277s Get:206 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 277s Get:207 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sass arm64 0.4.8+dfsg-1 [952 kB] 277s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 278s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 278s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 278s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringi arm64 1.8.3-1 [869 kB] 278s Get:212 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 278s Get:213 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-tinytex all 0.49-1 [141 kB] 278s Get:214 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 278s Get:215 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 278s Get:216 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rcpp arm64 1.0.12-1 [1971 kB] 278s Get:217 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-later arm64 1.3.2+dfsg-1 [120 kB] 278s Get:218 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-promises arm64 1.2.1+dfsg-1 [282 kB] 278s Get:219 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-httpuv arm64 1.6.14+dfsg-1 [496 kB] 278s Get:220 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 278s Get:221 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 278s Get:222 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 278s Get:223 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-commonmark arm64 1.9.1-1 [127 kB] 278s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 278s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 278s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 278s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 278s Get:228 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 278s Get:229 http://ftpmaster.internal/ubuntu noble/universe arm64 tex-common all 6.18 [32.8 kB] 278s Get:230 http://ftpmaster.internal/ubuntu noble/main arm64 t1utils arm64 1.41-4build2 [61.5 kB] 278s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-binaries arm64 2023.20230311.66589-9 [8364 kB] 279s Get:232 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-base all 2023.20240207-1 [21.7 MB] 280s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-latex-base all 2023.20240207-1 [1238 kB] 280s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 284s Get:235 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 284s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-go.db all 3.18.0-1 [18.7 MB] 285s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-graph arm64 1.80.0-1 [1289 kB] 285s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 r-bioc-org.hs.eg.db all 3.18.0-1 [64.1 MB] 288s Get:239 http://ftpmaster.internal/ubuntu noble/universe arm64 r-cran-runit all 0.4.32-3 [283 kB] 290s Preconfiguring packages ... 290s Fetched 446 MB in 29s (15.6 MB/s) 290s dpkg: libpsl5:arm64: dependency problems, but removing anyway as you requested: 290s wget depends on libpsl5 (>= 0.16.0). 290s libcurl4:arm64 depends on libpsl5 (>= 0.16.0). 290s libcurl3-gnutls:arm64 depends on libpsl5 (>= 0.16.0). 290s 291s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75866 files and directories currently installed.) 291s Removing libpsl5:arm64 (0.21.2-1build1) ... 291s Selecting previously unselected package libpsl5t64:arm64. 291s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75861 files and directories currently installed.) 291s Preparing to unpack .../libpsl5t64_0.21.2-1.1_arm64.deb ... 291s Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... 291s Preparing to unpack .../curl_8.5.0-2ubuntu7_arm64.deb ... 291s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 291s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75867 files and directories currently installed.) 291s Removing libcurl4:arm64 (8.5.0-2ubuntu2) ... 291s Selecting previously unselected package libcurl4t64:arm64. 292s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75862 files and directories currently installed.) 292s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_arm64.deb ... 292s Unpacking libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 292s dpkg: libpng16-16:arm64: dependency problems, but removing anyway as you requested: 292s libplymouth5:arm64 depends on libpng16-16 (>= 1.6.2). 292s libfreetype6:arm64 depends on libpng16-16 (>= 1.6.2-1). 292s 292s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75868 files and directories currently installed.) 292s Removing libpng16-16:arm64 (1.6.43-1) ... 292s Selecting previously unselected package libpng16-16t64:arm64. 292s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 292s Preparing to unpack .../libpng16-16t64_1.6.43-3_arm64.deb ... 292s Unpacking libpng16-16t64:arm64 (1.6.43-3) ... 292s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 292s parted depends on libreadline8 (>= 6.0). 292s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 292s libpython3.11-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 292s gpgsm depends on libreadline8 (>= 6.0). 292s gpgconf depends on libreadline8 (>= 6.0). 292s gpg depends on libreadline8 (>= 6.0). 292s gawk depends on libreadline8 (>= 6.0). 292s fdisk depends on libreadline8 (>= 6.0). 292s 292s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75869 files and directories currently installed.) 292s Removing libreadline8:arm64 (8.2-3) ... 293s Selecting previously unselected package libreadline8t64:arm64. 293s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75857 files and directories currently installed.) 293s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 293s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 293s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 293s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 293s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 293s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 293s dpkg: libtirpc3:arm64: dependency problems, but removing anyway as you requested: 293s lsof depends on libtirpc3 (>= 1.0.2). 293s libpython3.12-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 293s libpython3.11-stdlib:arm64 depends on libtirpc3 (>= 1.0.2). 293s libnsl2:arm64 depends on libtirpc3 (>= 1.0.2). 293s iproute2 depends on libtirpc3 (>= 1.0.2). 293s 293s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75877 files and directories currently installed.) 293s Removing libtirpc3:arm64 (1.3.4+ds-1build1) ... 293s Selecting previously unselected package libtirpc3t64:arm64. 294s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75871 files and directories currently installed.) 294s Preparing to unpack .../000-libtirpc3t64_1.3.4+ds-1.1_arm64.deb ... 294s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 294s Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 294s Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 294s Selecting previously unselected package libc-dev-bin. 294s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 294s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 294s Selecting previously unselected package linux-libc-dev:arm64. 294s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_arm64.deb ... 294s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 295s Selecting previously unselected package libcrypt-dev:arm64. 295s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 295s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 295s Selecting previously unselected package libtirpc-dev:arm64. 295s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1.1_arm64.deb ... 295s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 295s Selecting previously unselected package libnsl-dev:arm64. 295s Preparing to unpack .../005-libnsl-dev_1.3.0-3_arm64.deb ... 295s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 295s Selecting previously unselected package rpcsvc-proto. 295s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 295s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 295s Selecting previously unselected package libc6-dev:arm64. 295s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_arm64.deb ... 295s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 296s Selecting previously unselected package libisl23:arm64. 296s Preparing to unpack .../008-libisl23_0.26-3_arm64.deb ... 296s Unpacking libisl23:arm64 (0.26-3) ... 296s Selecting previously unselected package libmpc3:arm64. 296s Preparing to unpack .../009-libmpc3_1.3.1-1_arm64.deb ... 296s Unpacking libmpc3:arm64 (1.3.1-1) ... 296s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 296s Preparing to unpack .../010-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 296s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 297s Selecting previously unselected package cpp-13. 297s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_arm64.deb ... 297s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 297s Selecting previously unselected package cpp-aarch64-linux-gnu. 297s Preparing to unpack .../012-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 297s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 297s Selecting previously unselected package cpp. 297s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 297s Unpacking cpp (4:13.2.0-7ubuntu1) ... 297s Selecting previously unselected package libcc1-0:arm64. 297s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 297s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 298s Selecting previously unselected package libgomp1:arm64. 298s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 298s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 298s Selecting previously unselected package libitm1:arm64. 298s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_arm64.deb ... 298s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 298s Selecting previously unselected package libatomic1:arm64. 298s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 298s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 298s Selecting previously unselected package libasan8:arm64. 298s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_arm64.deb ... 298s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 298s Selecting previously unselected package liblsan0:arm64. 298s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 298s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 298s Selecting previously unselected package libtsan2:arm64. 298s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 298s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 299s Selecting previously unselected package libubsan1:arm64. 299s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 299s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 299s Selecting previously unselected package libhwasan0:arm64. 299s Preparing to unpack .../022-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 299s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 299s Selecting previously unselected package libgcc-13-dev:arm64. 299s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ... 299s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 300s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 300s Preparing to unpack .../024-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 300s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 301s Selecting previously unselected package gcc-13. 301s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_arm64.deb ... 301s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 301s Selecting previously unselected package gcc-aarch64-linux-gnu. 301s Preparing to unpack .../026-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 301s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 302s Selecting previously unselected package gcc. 302s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 302s Unpacking gcc (4:13.2.0-7ubuntu1) ... 302s Selecting previously unselected package libstdc++-13-dev:arm64. 302s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ... 302s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 303s Selecting previously unselected package g++-13-aarch64-linux-gnu. 303s Preparing to unpack .../029-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 303s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 304s Selecting previously unselected package g++-13. 304s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_arm64.deb ... 304s Unpacking g++-13 (13.2.0-17ubuntu2) ... 304s Selecting previously unselected package g++-aarch64-linux-gnu. 304s Preparing to unpack .../031-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 304s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 304s Selecting previously unselected package g++. 304s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 304s Unpacking g++ (4:13.2.0-7ubuntu1) ... 304s Selecting previously unselected package build-essential. 304s Preparing to unpack .../033-build-essential_12.10ubuntu1_arm64.deb ... 304s Unpacking build-essential (12.10ubuntu1) ... 304s Selecting previously unselected package dctrl-tools. 304s Preparing to unpack .../034-dctrl-tools_2.24-3build2_arm64.deb ... 304s Unpacking dctrl-tools (2.24-3build2) ... 304s Selecting previously unselected package fonts-dejavu-mono. 304s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 304s Unpacking fonts-dejavu-mono (2.37-8) ... 304s Selecting previously unselected package fonts-dejavu-core. 304s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 304s Unpacking fonts-dejavu-core (2.37-8) ... 305s Selecting previously unselected package fontconfig-config. 305s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 305s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 305s Selecting previously unselected package libfontconfig1:arm64. 305s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 305s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 305s Selecting previously unselected package fontconfig. 306s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_arm64.deb ... 306s Unpacking fontconfig (2.15.0-1ubuntu1) ... 306s Selecting previously unselected package fonts-font-awesome. 306s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 306s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 306s Selecting previously unselected package fonts-glyphicons-halflings. 306s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 306s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 306s Selecting previously unselected package fonts-lmodern. 306s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 306s Unpacking fonts-lmodern (2.005-1) ... 306s Selecting previously unselected package fonts-mathjax. 306s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 306s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 307s Selecting previously unselected package libgfortran5:arm64. 307s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 307s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 307s Selecting previously unselected package libgfortran-13-dev:arm64. 307s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_arm64.deb ... 307s Unpacking libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 307s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 307s Preparing to unpack .../046-gfortran-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ... 307s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 308s Selecting previously unselected package gfortran-13. 308s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_arm64.deb ... 308s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 308s Selecting previously unselected package gfortran-aarch64-linux-gnu. 308s Preparing to unpack .../048-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 308s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 308s Selecting previously unselected package gfortran. 309s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 309s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 309s Selecting previously unselected package icu-devtools. 309s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_arm64.deb ... 309s Unpacking icu-devtools (74.2-1ubuntu1) ... 309s Selecting previously unselected package javascript-common. 309s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 309s Unpacking javascript-common (11+nmu1) ... 309s Selecting previously unselected package libio-string-perl. 309s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 309s Unpacking libio-string-perl (1.08-4) ... 309s Selecting previously unselected package liblatex-tounicode-perl. 309s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 309s Unpacking liblatex-tounicode-perl (0.54-2) ... 309s Selecting previously unselected package libbibtex-parser-perl. 309s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 309s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 309s Selecting previously unselected package libblas3:arm64. 309s Preparing to unpack .../055-libblas3_3.12.0-3_arm64.deb ... 309s Unpacking libblas3:arm64 (3.12.0-3) ... 309s Selecting previously unselected package libblas-dev:arm64. 310s Preparing to unpack .../056-libblas-dev_3.12.0-3_arm64.deb ... 310s Unpacking libblas-dev:arm64 (3.12.0-3) ... 310s Selecting previously unselected package libbz2-dev:arm64. 310s Preparing to unpack .../057-libbz2-dev_1.0.8-5ubuntu1_arm64.deb ... 310s Unpacking libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 310s Selecting previously unselected package libpixman-1-0:arm64. 310s Preparing to unpack .../058-libpixman-1-0_0.42.2-1_arm64.deb ... 310s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 310s Selecting previously unselected package libxcb-render0:arm64. 310s Preparing to unpack .../059-libxcb-render0_1.15-1_arm64.deb ... 310s Unpacking libxcb-render0:arm64 (1.15-1) ... 310s Selecting previously unselected package libxcb-shm0:arm64. 310s Preparing to unpack .../060-libxcb-shm0_1.15-1_arm64.deb ... 310s Unpacking libxcb-shm0:arm64 (1.15-1) ... 310s Selecting previously unselected package libxrender1:arm64. 310s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 310s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 310s Selecting previously unselected package libcairo2:arm64. 310s Preparing to unpack .../062-libcairo2_1.18.0-1_arm64.deb ... 310s Unpacking libcairo2:arm64 (1.18.0-1) ... 310s Selecting previously unselected package libdatrie1:arm64. 310s Preparing to unpack .../063-libdatrie1_0.2.13-3_arm64.deb ... 310s Unpacking libdatrie1:arm64 (0.2.13-3) ... 310s Selecting previously unselected package libdeflate0:arm64. 310s Preparing to unpack .../064-libdeflate0_1.19-1_arm64.deb ... 310s Unpacking libdeflate0:arm64 (1.19-1) ... 310s Selecting previously unselected package libgraphite2-3:arm64. 310s Preparing to unpack .../065-libgraphite2-3_1.3.14-2_arm64.deb ... 310s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 311s Selecting previously unselected package libharfbuzz0b:arm64. 311s Preparing to unpack .../066-libharfbuzz0b_8.3.0-2_arm64.deb ... 311s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 311s Selecting previously unselected package x11-common. 311s Preparing to unpack .../067-x11-common_1%3a7.7+23ubuntu2_all.deb ... 311s Unpacking x11-common (1:7.7+23ubuntu2) ... 311s Selecting previously unselected package libice6:arm64. 311s Preparing to unpack .../068-libice6_2%3a1.0.10-1build2_arm64.deb ... 311s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 311s Selecting previously unselected package libicu-dev:arm64. 311s Preparing to unpack .../069-libicu-dev_74.2-1ubuntu1_arm64.deb ... 311s Unpacking libicu-dev:arm64 (74.2-1ubuntu1) ... 312s Selecting previously unselected package libjpeg-turbo8:arm64. 312s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 312s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 312s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 312s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-2ubuntu1_arm64.deb ... 312s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 312s Selecting previously unselected package libjpeg8:arm64. 312s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_arm64.deb ... 312s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 312s Selecting previously unselected package libjpeg8-dev:arm64. 312s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 312s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 313s Selecting previously unselected package libjpeg-dev:arm64. 313s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 313s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 313s Selecting previously unselected package libjs-bootstrap. 313s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 313s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 313s Selecting previously unselected package libjs-popper.js. 313s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6_all.deb ... 313s Unpacking libjs-popper.js (1.16.1+ds-6) ... 313s Selecting previously unselected package libjs-bootstrap4. 313s Preparing to unpack .../077-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 313s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 313s Selecting previously unselected package libjs-d3. 313s Preparing to unpack .../078-libjs-d3_3.5.17-4_all.deb ... 313s Unpacking libjs-d3 (3.5.17-4) ... 313s Selecting previously unselected package libjs-es5-shim. 313s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ... 313s Unpacking libjs-es5-shim (4.6.7-2) ... 313s Selecting previously unselected package libjs-highlight.js. 314s Preparing to unpack .../080-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 314s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 314s Selecting previously unselected package libjs-jquery. 314s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 314s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 314s Selecting previously unselected package libjs-jquery-datatables. 314s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 314s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 314s Selecting previously unselected package libjs-sifter.js. 314s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 314s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 314s Selecting previously unselected package libjs-microplugin.js. 314s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 314s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 314s Selecting previously unselected package libjs-jquery-selectize.js. 314s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 314s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 314s Selecting previously unselected package libjs-jquery-ui. 314s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 314s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 315s Selecting previously unselected package libjs-json. 315s Preparing to unpack .../087-libjs-json_0~20221030+~1.0.8-1_all.deb ... 315s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 315s Selecting previously unselected package libjs-lunr. 315s Preparing to unpack .../088-libjs-lunr_2.3.9~dfsg-2_all.deb ... 315s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 315s Selecting previously unselected package libjs-prettify. 315s Preparing to unpack .../089-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 315s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 315s Selecting previously unselected package libkpathsea6:arm64. 315s Preparing to unpack .../090-libkpathsea6_2023.20230311.66589-9_arm64.deb ... 315s Unpacking libkpathsea6:arm64 (2023.20230311.66589-9) ... 315s Selecting previously unselected package liblapack3:arm64. 315s Preparing to unpack .../091-liblapack3_3.12.0-3_arm64.deb ... 315s Unpacking liblapack3:arm64 (3.12.0-3) ... 315s Selecting previously unselected package liblapack-dev:arm64. 315s Preparing to unpack .../092-liblapack-dev_3.12.0-3_arm64.deb ... 315s Unpacking liblapack-dev:arm64 (3.12.0-3) ... 316s Selecting previously unselected package liblerc4:arm64. 316s Preparing to unpack .../093-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 316s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 316s Selecting previously unselected package liblua5.4-0:arm64. 316s Preparing to unpack .../094-liblua5.4-0_5.4.6-3_arm64.deb ... 316s Unpacking liblua5.4-0:arm64 (5.4.6-3) ... 316s Selecting previously unselected package libncurses-dev:arm64. 316s Preparing to unpack .../095-libncurses-dev_6.4+20240113-1ubuntu1_arm64.deb ... 316s Unpacking libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 316s Selecting previously unselected package libthai-data. 316s Preparing to unpack .../096-libthai-data_0.1.29-2_all.deb ... 316s Unpacking libthai-data (0.1.29-2) ... 316s Selecting previously unselected package libthai0:arm64. 316s Preparing to unpack .../097-libthai0_0.1.29-2_arm64.deb ... 316s Unpacking libthai0:arm64 (0.1.29-2) ... 316s Selecting previously unselected package libpango-1.0-0:arm64. 316s Preparing to unpack .../098-libpango-1.0-0_1.51.0+ds-4_arm64.deb ... 316s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ... 316s Selecting previously unselected package libpangoft2-1.0-0:arm64. 316s Preparing to unpack .../099-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ... 316s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 317s Selecting previously unselected package libpangocairo-1.0-0:arm64. 317s Preparing to unpack .../100-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ... 317s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 317s Selecting previously unselected package libpaper1:arm64. 317s Preparing to unpack .../101-libpaper1_1.1.29_arm64.deb ... 317s Unpacking libpaper1:arm64 (1.1.29) ... 317s Selecting previously unselected package libpaper-utils. 317s Preparing to unpack .../102-libpaper-utils_1.1.29_arm64.deb ... 317s Unpacking libpaper-utils (1.1.29) ... 317s Selecting previously unselected package libpcre2-16-0:arm64. 317s Preparing to unpack .../103-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ... 317s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 317s Selecting previously unselected package libpcre2-32-0:arm64. 317s Preparing to unpack .../104-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ... 317s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 317s Selecting previously unselected package libpcre2-posix3:arm64. 317s Preparing to unpack .../105-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ... 317s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 317s Selecting previously unselected package libpcre2-dev:arm64. 317s Preparing to unpack .../106-libpcre2-dev_10.42-4ubuntu1_arm64.deb ... 317s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ... 317s Selecting previously unselected package libpkgconf3:arm64. 317s Preparing to unpack .../107-libpkgconf3_1.8.1-2_arm64.deb ... 317s Unpacking libpkgconf3:arm64 (1.8.1-2) ... 317s Selecting previously unselected package zlib1g-dev:arm64. 317s Preparing to unpack .../108-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_arm64.deb ... 317s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 318s Selecting previously unselected package libpng-dev:arm64. 318s Preparing to unpack .../109-libpng-dev_1.6.43-3_arm64.deb ... 318s Unpacking libpng-dev:arm64 (1.6.43-3) ... 318s Selecting previously unselected package libpotrace0:arm64. 318s Preparing to unpack .../110-libpotrace0_1.16-2_arm64.deb ... 318s Unpacking libpotrace0:arm64 (1.16-2) ... 318s Selecting previously unselected package libptexenc1:arm64. 318s Preparing to unpack .../111-libptexenc1_2023.20230311.66589-9_arm64.deb ... 318s Unpacking libptexenc1:arm64 (2023.20230311.66589-9) ... 318s Selecting previously unselected package libreadline-dev:arm64. 318s Preparing to unpack .../112-libreadline-dev_8.2-3.1_arm64.deb ... 318s Unpacking libreadline-dev:arm64 (8.2-3.1) ... 318s Selecting previously unselected package libsharpyuv0:arm64. 318s Preparing to unpack .../113-libsharpyuv0_1.3.2-0.4_arm64.deb ... 318s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 318s Selecting previously unselected package libsm6:arm64. 318s Preparing to unpack .../114-libsm6_2%3a1.2.3-1build2_arm64.deb ... 318s Unpacking libsm6:arm64 (2:1.2.3-1build2) ... 318s Selecting previously unselected package libsynctex2:arm64. 318s Preparing to unpack .../115-libsynctex2_2023.20230311.66589-9_arm64.deb ... 318s Unpacking libsynctex2:arm64 (2023.20230311.66589-9) ... 318s Selecting previously unselected package libtcl8.6:arm64. 318s Preparing to unpack .../116-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 318s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 319s Selecting previously unselected package libteckit0:arm64. 319s Preparing to unpack .../117-libteckit0_2.5.12+ds1-1_arm64.deb ... 319s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 319s Selecting previously unselected package libtexlua53-5:arm64. 319s Preparing to unpack .../118-libtexlua53-5_2023.20230311.66589-9_arm64.deb ... 319s Unpacking libtexlua53-5:arm64 (2023.20230311.66589-9) ... 319s Selecting previously unselected package libjbig0:arm64. 319s Preparing to unpack .../119-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 319s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 319s Selecting previously unselected package libwebp7:arm64. 319s Preparing to unpack .../120-libwebp7_1.3.2-0.4_arm64.deb ... 319s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 319s Selecting previously unselected package libtiff6:arm64. 319s Preparing to unpack .../121-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 319s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 319s Selecting previously unselected package libxft2:arm64. 319s Preparing to unpack .../122-libxft2_2.3.6-1_arm64.deb ... 319s Unpacking libxft2:arm64 (2.3.6-1) ... 319s Selecting previously unselected package libxss1:arm64. 319s Preparing to unpack .../123-libxss1_1%3a1.2.3-1build2_arm64.deb ... 319s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 319s Selecting previously unselected package libtk8.6:arm64. 319s Preparing to unpack .../124-libtk8.6_8.6.13-2_arm64.deb ... 319s Unpacking libtk8.6:arm64 (8.6.13-2) ... 320s Selecting previously unselected package libxt6t64:arm64. 320s Preparing to unpack .../125-libxt6t64_1%3a1.2.1-1.2_arm64.deb ... 320s Unpacking libxt6t64:arm64 (1:1.2.1-1.2) ... 320s Selecting previously unselected package libxmu6:arm64. 320s Preparing to unpack .../126-libxmu6_2%3a1.1.3-3_arm64.deb ... 320s Unpacking libxmu6:arm64 (2:1.1.3-3) ... 320s Selecting previously unselected package libxpm4:arm64. 320s Preparing to unpack .../127-libxpm4_1%3a3.5.17-1_arm64.deb ... 320s Unpacking libxpm4:arm64 (1:3.5.17-1) ... 320s Selecting previously unselected package libxaw7:arm64. 320s Preparing to unpack .../128-libxaw7_2%3a1.0.14-1_arm64.deb ... 320s Unpacking libxaw7:arm64 (2:1.0.14-1) ... 320s Selecting previously unselected package libxi6:arm64. 320s Preparing to unpack .../129-libxi6_2%3a1.8.1-1_arm64.deb ... 320s Unpacking libxi6:arm64 (2:1.8.1-1) ... 320s Selecting previously unselected package libzzip-0-13:arm64. 320s Preparing to unpack .../130-libzzip-0-13_0.13.72+dfsg.1-1.1_arm64.deb ... 320s Unpacking libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 320s Selecting previously unselected package zip. 320s Preparing to unpack .../131-zip_3.0-13_arm64.deb ... 320s Unpacking zip (3.0-13) ... 320s Selecting previously unselected package unzip. 320s Preparing to unpack .../132-unzip_6.0-28ubuntu3_arm64.deb ... 320s Unpacking unzip (6.0-28ubuntu3) ... 320s Selecting previously unselected package xdg-utils. 320s Preparing to unpack .../133-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 320s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 320s Selecting previously unselected package r-base-core. 321s Preparing to unpack .../134-r-base-core_4.3.3-2build1_arm64.deb ... 321s Unpacking r-base-core (4.3.3-2build1) ... 322s Selecting previously unselected package r-cran-littler. 322s Preparing to unpack .../135-r-cran-littler_0.3.19-1_arm64.deb ... 322s Unpacking r-cran-littler (0.3.19-1) ... 322s Selecting previously unselected package littler. 322s Preparing to unpack .../136-littler_0.3.19-1_all.deb ... 322s Unpacking littler (0.3.19-1) ... 322s Selecting previously unselected package node-bootstrap-sass. 322s Preparing to unpack .../137-node-bootstrap-sass_3.4.3-2_all.deb ... 322s Unpacking node-bootstrap-sass (3.4.3-2) ... 323s Selecting previously unselected package node-html5shiv. 323s Preparing to unpack .../138-node-html5shiv_3.7.3+dfsg-5_all.deb ... 323s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 323s Selecting previously unselected package node-normalize.css. 323s Preparing to unpack .../139-node-normalize.css_8.0.1-5_all.deb ... 323s Unpacking node-normalize.css (8.0.1-5) ... 323s Selecting previously unselected package pandoc-data. 323s Preparing to unpack .../140-pandoc-data_3.1.3-1_all.deb ... 323s Unpacking pandoc-data (3.1.3-1) ... 323s Selecting previously unselected package pandoc. 323s Preparing to unpack .../141-pandoc_3.1.3+ds-2_arm64.deb ... 323s Unpacking pandoc (3.1.3+ds-2) ... 327s Selecting previously unselected package pkgconf-bin. 327s Preparing to unpack .../142-pkgconf-bin_1.8.1-2_arm64.deb ... 327s Unpacking pkgconf-bin (1.8.1-2) ... 327s Selecting previously unselected package pkgconf:arm64. 327s Preparing to unpack .../143-pkgconf_1.8.1-2_arm64.deb ... 327s Unpacking pkgconf:arm64 (1.8.1-2) ... 327s Selecting previously unselected package pkg-config:arm64. 327s Preparing to unpack .../144-pkg-config_1.8.1-2_arm64.deb ... 327s Unpacking pkg-config:arm64 (1.8.1-2) ... 327s Selecting previously unselected package liblzma-dev:arm64. 327s Preparing to unpack .../145-liblzma-dev_5.4.5-0.3_arm64.deb ... 327s Unpacking liblzma-dev:arm64 (5.4.5-0.3) ... 327s Selecting previously unselected package r-base-dev. 327s Preparing to unpack .../146-r-base-dev_4.3.3-2build1_all.deb ... 327s Unpacking r-base-dev (4.3.3-2build1) ... 327s Selecting previously unselected package pkg-r-autopkgtest. 327s Preparing to unpack .../147-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 327s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 327s Selecting previously unselected package r-bioc-biocgenerics. 327s Preparing to unpack .../148-r-bioc-biocgenerics_0.48.1-2_all.deb ... 327s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 328s Selecting previously unselected package r-bioc-biobase. 328s Preparing to unpack .../149-r-bioc-biobase_2.62.0-1_arm64.deb ... 328s Unpacking r-bioc-biobase (2.62.0-1) ... 328s Selecting previously unselected package r-bioc-s4vectors. 328s Preparing to unpack .../150-r-bioc-s4vectors_0.40.2+dfsg-1_arm64.deb ... 328s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 328s Selecting previously unselected package r-bioc-iranges. 328s Preparing to unpack .../151-r-bioc-iranges_2.36.0-1_arm64.deb ... 328s Unpacking r-bioc-iranges (2.36.0-1) ... 328s Selecting previously unselected package r-cran-dbi. 328s Preparing to unpack .../152-r-cran-dbi_1.2.2-1_all.deb ... 328s Unpacking r-cran-dbi (1.2.2-1) ... 328s Selecting previously unselected package r-cran-bit. 328s Preparing to unpack .../153-r-cran-bit_4.0.5-1_arm64.deb ... 328s Unpacking r-cran-bit (4.0.5-1) ... 328s Selecting previously unselected package r-cran-bit64. 328s Preparing to unpack .../154-r-cran-bit64_4.0.5-1_arm64.deb ... 328s Unpacking r-cran-bit64 (4.0.5-1) ... 329s Selecting previously unselected package r-cran-rlang. 329s Preparing to unpack .../155-r-cran-rlang_1.1.3-1_arm64.deb ... 329s Unpacking r-cran-rlang (1.1.3-1) ... 329s Selecting previously unselected package r-cran-cli. 329s Preparing to unpack .../156-r-cran-cli_3.6.2-1_arm64.deb ... 329s Unpacking r-cran-cli (3.6.2-1) ... 329s Selecting previously unselected package r-cran-glue. 329s Preparing to unpack .../157-r-cran-glue_1.7.0-1_arm64.deb ... 329s Unpacking r-cran-glue (1.7.0-1) ... 329s Selecting previously unselected package r-cran-lifecycle. 329s Preparing to unpack .../158-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 329s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 329s Selecting previously unselected package r-cran-vctrs. 330s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_arm64.deb ... 330s Unpacking r-cran-vctrs (0.6.5-1) ... 330s Selecting previously unselected package r-cran-blob. 330s Preparing to unpack .../160-r-cran-blob_1.2.4-1_all.deb ... 330s Unpacking r-cran-blob (1.2.4-1) ... 330s Selecting previously unselected package r-cran-fastmap. 330s Preparing to unpack .../161-r-cran-fastmap_1.1.1-1_arm64.deb ... 330s Unpacking r-cran-fastmap (1.1.1-1) ... 330s Selecting previously unselected package r-cran-cachem. 330s Preparing to unpack .../162-r-cran-cachem_1.0.8-1_arm64.deb ... 330s Unpacking r-cran-cachem (1.0.8-1) ... 330s Selecting previously unselected package r-cran-memoise. 330s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 330s Unpacking r-cran-memoise (2.0.1-1) ... 330s Selecting previously unselected package r-cran-pkgconfig. 330s Preparing to unpack .../164-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 330s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 330s Selecting previously unselected package r-cran-plogr. 330s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build1_all.deb ... 330s Unpacking r-cran-plogr (0.2.0-3build1) ... 330s Selecting previously unselected package r-cran-cpp11. 330s Preparing to unpack .../166-r-cran-cpp11_0.4.7-1_all.deb ... 330s Unpacking r-cran-cpp11 (0.4.7-1) ... 331s Selecting previously unselected package r-cran-rsqlite. 331s Preparing to unpack .../167-r-cran-rsqlite_2.3.4-1_arm64.deb ... 331s Unpacking r-cran-rsqlite (2.3.4-1) ... 331s Selecting previously unselected package r-cran-curl. 331s Preparing to unpack .../168-r-cran-curl_5.2.0+dfsg-1_arm64.deb ... 331s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 331s Selecting previously unselected package r-cran-jsonlite. 331s Preparing to unpack .../169-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 331s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 331s Selecting previously unselected package r-cran-mime. 331s Preparing to unpack .../170-r-cran-mime_0.12-1_arm64.deb ... 331s Unpacking r-cran-mime (0.12-1) ... 331s Selecting previously unselected package r-cran-sys. 331s Preparing to unpack .../171-r-cran-sys_3.4.2-1_arm64.deb ... 331s Unpacking r-cran-sys (3.4.2-1) ... 331s Selecting previously unselected package r-cran-askpass. 331s Preparing to unpack .../172-r-cran-askpass_1.2.0-1_arm64.deb ... 331s Unpacking r-cran-askpass (1.2.0-1) ... 331s Selecting previously unselected package r-cran-openssl. 331s Preparing to unpack .../173-r-cran-openssl_2.1.1+dfsg-2_arm64.deb ... 331s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 332s Selecting previously unselected package r-cran-r6. 332s Preparing to unpack .../174-r-cran-r6_2.5.1-1_all.deb ... 332s Unpacking r-cran-r6 (2.5.1-1) ... 332s Selecting previously unselected package r-cran-httr. 332s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ... 332s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 332s Selecting previously unselected package r-cran-png. 332s Preparing to unpack .../176-r-cran-png_0.1-8-1_arm64.deb ... 332s Unpacking r-cran-png (0.1-8-1) ... 332s Selecting previously unselected package r-bioc-zlibbioc. 332s Preparing to unpack .../177-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 332s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 332s Selecting previously unselected package r-bioc-xvector. 332s Preparing to unpack .../178-r-bioc-xvector_0.42.0-1_arm64.deb ... 332s Unpacking r-bioc-xvector (0.42.0-1) ... 332s Selecting previously unselected package r-cran-bitops. 332s Preparing to unpack .../179-r-cran-bitops_1.0-7-1_arm64.deb ... 332s Unpacking r-cran-bitops (1.0-7-1) ... 332s Selecting previously unselected package r-cran-rcurl. 332s Preparing to unpack .../180-r-cran-rcurl_1.98-1.14+dfsg-1_arm64.deb ... 332s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 333s Selecting previously unselected package r-bioc-genomeinfodbdata. 333s Preparing to unpack .../181-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 333s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 333s Selecting previously unselected package r-bioc-genomeinfodb. 333s Preparing to unpack .../182-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 333s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 333s Selecting previously unselected package r-cran-crayon. 333s Preparing to unpack .../183-r-cran-crayon_1.5.2-1_all.deb ... 333s Unpacking r-cran-crayon (1.5.2-1) ... 333s Selecting previously unselected package r-bioc-biostrings. 333s Preparing to unpack .../184-r-bioc-biostrings_2.70.2+dfsg-1_arm64.deb ... 333s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 334s Selecting previously unselected package r-bioc-keggrest. 334s Preparing to unpack .../185-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 334s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 334s Selecting previously unselected package r-bioc-annotationdbi. 334s Preparing to unpack .../186-r-bioc-annotationdbi_1.64.1-1_all.deb ... 334s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 334s Selecting previously unselected package r-cran-base64enc. 334s Preparing to unpack .../187-r-cran-base64enc_0.1-3-3_arm64.deb ... 334s Unpacking r-cran-base64enc (0.1-3-3) ... 335s Selecting previously unselected package r-cran-digest. 335s Preparing to unpack .../188-r-cran-digest_0.6.34-1_arm64.deb ... 335s Unpacking r-cran-digest (0.6.34-1) ... 335s Selecting previously unselected package r-cran-ellipsis. 335s Preparing to unpack .../189-r-cran-ellipsis_0.3.2-2_arm64.deb ... 335s Unpacking r-cran-ellipsis (0.3.2-2) ... 335s Selecting previously unselected package r-cran-htmltools. 335s Preparing to unpack .../190-r-cran-htmltools_0.5.7-1_arm64.deb ... 335s Unpacking r-cran-htmltools (0.5.7-1) ... 335s Selecting previously unselected package r-cran-evaluate. 335s Preparing to unpack .../191-r-cran-evaluate_0.23-1_all.deb ... 335s Unpacking r-cran-evaluate (0.23-1) ... 335s Selecting previously unselected package r-cran-xfun. 335s Preparing to unpack .../192-r-cran-xfun_0.41+dfsg-1_arm64.deb ... 335s Unpacking r-cran-xfun (0.41+dfsg-1) ... 335s Selecting previously unselected package r-cran-highr. 335s Preparing to unpack .../193-r-cran-highr_0.10+dfsg-1_all.deb ... 335s Unpacking r-cran-highr (0.10+dfsg-1) ... 335s Selecting previously unselected package r-cran-yaml. 335s Preparing to unpack .../194-r-cran-yaml_2.3.8-1_arm64.deb ... 335s Unpacking r-cran-yaml (2.3.8-1) ... 336s Selecting previously unselected package libjs-mathjax. 336s Preparing to unpack .../195-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 336s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 340s Selecting previously unselected package r-cran-knitr. 340s Preparing to unpack .../196-r-cran-knitr_1.45+dfsg-1_all.deb ... 340s Unpacking r-cran-knitr (1.45+dfsg-1) ... 341s Selecting previously unselected package r-cran-jquerylib. 341s Preparing to unpack .../197-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 341s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 341s Selecting previously unselected package r-cran-fs. 341s Preparing to unpack .../198-r-cran-fs_1.6.3+dfsg-1_arm64.deb ... 341s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 341s Selecting previously unselected package r-cran-rappdirs. 341s Preparing to unpack .../199-r-cran-rappdirs_0.3.3-1_arm64.deb ... 341s Unpacking r-cran-rappdirs (0.3.3-1) ... 341s Selecting previously unselected package r-cran-sass. 341s Preparing to unpack .../200-r-cran-sass_0.4.8+dfsg-1_arm64.deb ... 341s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 341s Selecting previously unselected package r-cran-bslib. 341s Preparing to unpack .../201-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 341s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 342s Selecting previously unselected package r-cran-fontawesome. 342s Preparing to unpack .../202-r-cran-fontawesome_0.5.2-1_all.deb ... 342s Unpacking r-cran-fontawesome (0.5.2-1) ... 342s Selecting previously unselected package r-cran-magrittr. 342s Preparing to unpack .../203-r-cran-magrittr_2.0.3-1_arm64.deb ... 342s Unpacking r-cran-magrittr (2.0.3-1) ... 342s Selecting previously unselected package r-cran-stringi. 342s Preparing to unpack .../204-r-cran-stringi_1.8.3-1_arm64.deb ... 342s Unpacking r-cran-stringi (1.8.3-1) ... 342s Selecting previously unselected package r-cran-stringr. 342s Preparing to unpack .../205-r-cran-stringr_1.5.1-1_all.deb ... 342s Unpacking r-cran-stringr (1.5.1-1) ... 343s Selecting previously unselected package r-cran-tinytex. 343s Preparing to unpack .../206-r-cran-tinytex_0.49-1_all.deb ... 343s Unpacking r-cran-tinytex (0.49-1) ... 343s Selecting previously unselected package libjs-modernizr. 343s Preparing to unpack .../207-libjs-modernizr_2.6.2+ds1-5_all.deb ... 343s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 343s Selecting previously unselected package r-cran-pkgkitten. 343s Preparing to unpack .../208-r-cran-pkgkitten_0.2.3-1_all.deb ... 343s Unpacking r-cran-pkgkitten (0.2.3-1) ... 343s Selecting previously unselected package r-cran-rcpp. 343s Preparing to unpack .../209-r-cran-rcpp_1.0.12-1_arm64.deb ... 343s Unpacking r-cran-rcpp (1.0.12-1) ... 344s Selecting previously unselected package r-cran-later. 344s Preparing to unpack .../210-r-cran-later_1.3.2+dfsg-1_arm64.deb ... 344s Unpacking r-cran-later (1.3.2+dfsg-1) ... 344s Selecting previously unselected package r-cran-promises. 344s Preparing to unpack .../211-r-cran-promises_1.2.1+dfsg-1_arm64.deb ... 344s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 344s Selecting previously unselected package r-cran-httpuv. 344s Preparing to unpack .../212-r-cran-httpuv_1.6.14+dfsg-1_arm64.deb ... 344s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 344s Selecting previously unselected package r-cran-xtable. 344s Preparing to unpack .../213-r-cran-xtable_1%3a1.8-4-2_all.deb ... 344s Unpacking r-cran-xtable (1:1.8-4-2) ... 344s Selecting previously unselected package r-cran-sourcetools. 344s Preparing to unpack .../214-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 344s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 344s Selecting previously unselected package r-cran-withr. 344s Preparing to unpack .../215-r-cran-withr_2.5.0-1_all.deb ... 344s Unpacking r-cran-withr (2.5.0-1) ... 345s Selecting previously unselected package r-cran-commonmark. 345s Preparing to unpack .../216-r-cran-commonmark_1.9.1-1_arm64.deb ... 345s Unpacking r-cran-commonmark (1.9.1-1) ... 345s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 345s Preparing to unpack .../217-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 345s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 345s Selecting previously unselected package r-cran-shiny. 345s Preparing to unpack .../218-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 345s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 345s Selecting previously unselected package r-cran-rmarkdown. 345s Preparing to unpack .../219-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 345s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 346s Selecting previously unselected package r-cran-bookdown. 346s Preparing to unpack .../220-r-cran-bookdown_0.37+dfsg-1_all.deb ... 346s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 346s Selecting previously unselected package r-cran-biocmanager. 346s Preparing to unpack .../221-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 346s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 346s Selecting previously unselected package tex-common. 346s Preparing to unpack .../222-tex-common_6.18_all.deb ... 346s Unpacking tex-common (6.18) ... 346s Selecting previously unselected package t1utils. 346s Preparing to unpack .../223-t1utils_1.41-4build2_arm64.deb ... 346s Unpacking t1utils (1.41-4build2) ... 347s Selecting previously unselected package texlive-binaries. 347s Preparing to unpack .../224-texlive-binaries_2023.20230311.66589-9_arm64.deb ... 347s Unpacking texlive-binaries (2023.20230311.66589-9) ... 348s Selecting previously unselected package texlive-base. 348s Preparing to unpack .../225-texlive-base_2023.20240207-1_all.deb ... 348s Unpacking texlive-base (2023.20240207-1) ... 353s Selecting previously unselected package texlive-latex-base. 353s Preparing to unpack .../226-texlive-latex-base_2023.20240207-1_all.deb ... 353s Unpacking texlive-latex-base (2023.20240207-1) ... 355s Selecting previously unselected package texlive-bibtex-extra. 355s Preparing to unpack .../227-texlive-bibtex-extra_2023.20240207-1_all.deb ... 355s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 368s Selecting previously unselected package r-bioc-biocstyle. 368s Preparing to unpack .../228-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 368s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 368s Selecting previously unselected package r-bioc-go.db. 369s Preparing to unpack .../229-r-bioc-go.db_3.18.0-1_all.deb ... 369s Unpacking r-bioc-go.db (3.18.0-1) ... 370s Selecting previously unselected package r-bioc-graph. 370s Preparing to unpack .../230-r-bioc-graph_1.80.0-1_arm64.deb ... 370s Unpacking r-bioc-graph (1.80.0-1) ... 371s Selecting previously unselected package r-bioc-org.hs.eg.db. 371s Preparing to unpack .../231-r-bioc-org.hs.eg.db_3.18.0-1_all.deb ... 371s Unpacking r-bioc-org.hs.eg.db (3.18.0-1) ... 379s Selecting previously unselected package r-cran-runit. 379s Preparing to unpack .../232-r-cran-runit_0.4.32-3_all.deb ... 379s Unpacking r-cran-runit (0.4.32-3) ... 379s Selecting previously unselected package autopkgtest-satdep. 379s Preparing to unpack .../233-1-autopkgtest-satdep.deb ... 379s Unpacking autopkgtest-satdep (0) ... 379s Setting up libjs-json (0~20221030+~1.0.8-1) ... 379s Setting up javascript-common (11+nmu1) ... 379s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 379s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 379s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 379s Setting up libpaper1:arm64 (1.1.29) ... 380s 380s Creating config file /etc/papersize with new version 380s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 380s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 380s Setting up libxpm4:arm64 (1:3.5.17-1) ... 380s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 380s Setting up libxi6:arm64 (2:1.8.1-1) ... 380s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 380s Setting up libdatrie1:arm64 (0.2.13-3) ... 380s Setting up libjs-popper.js (1.16.1+ds-6) ... 380s Setting up libtirpc3t64:arm64 (1.3.4+ds-1.1) ... 380s Setting up libxcb-render0:arm64 (1.15-1) ... 380s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 380s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 380s Setting up libjs-lunr (2.3.9~dfsg-2) ... 380s Setting up unzip (6.0-28ubuntu3) ... 380s Setting up liblatex-tounicode-perl (0.54-2) ... 380s Setting up x11-common (1:7.7+23ubuntu2) ... 382s Setting up node-html5shiv (3.7.3+dfsg-5) ... 382s Setting up libpsl5t64:arm64 (0.21.2-1.1) ... 382s Setting up libdeflate0:arm64 (1.19-1) ... 382s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 382s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 382s Setting up libxcb-shm0:arm64 (1.15-1) ... 382s Setting up libzzip-0-13:arm64 (0.13.72+dfsg.1-1.1) ... 382s Setting up libpaper-utils (1.1.29) ... 382s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 382s Setting up libjs-modernizr (2.6.2+ds1-5) ... 382s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 382s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ... 382s Setting up libjs-es5-shim (4.6.7-2) ... 382s Setting up tex-common (6.18) ... 384s update-language: texlive-base not installed and configured, doing nothing! 384s Setting up libio-string-perl (1.08-4) ... 384s Setting up zip (3.0-13) ... 384s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ... 384s Setting up libblas3:arm64 (3.12.0-3) ... 384s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 384s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.1) ... 384s Setting up libpkgconf3:arm64 (1.8.1-2) ... 384s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 384s Setting up libteckit0:arm64 (2.5.12+ds1-1) ... 384s Setting up t1utils (1.41-4build2) ... 384s Setting up libtexlua53-5:arm64 (2023.20230311.66589-9) ... 384s Setting up libjs-d3 (3.5.17-4) ... 384s Setting up fonts-dejavu-mono (2.37-8) ... 384s Setting up libpng16-16t64:arm64 (1.6.43-3) ... 384s Setting up libmpc3:arm64 (1.3.1-1) ... 384s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 384s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 384s Setting up icu-devtools (74.2-1ubuntu1) ... 384s Setting up fonts-dejavu-core (2.37-8) ... 384s Setting up pkgconf-bin (1.8.1-2) ... 384s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 384s Setting up libkpathsea6:arm64 (2023.20230311.66589-9) ... 384s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 384s Setting up libwebp7:arm64 (1.3.2-0.4) ... 384s Setting up libreadline8t64:arm64 (8.2-3.1) ... 384s Setting up liblzma-dev:arm64 (5.4.5-0.3) ... 384s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 384s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ... 384s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 384s Setting up libnsl-dev:arm64 (1.3.0-3) ... 384s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 384s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 385s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 385s Setting up fonts-lmodern (2.005-1) ... 385s Setting up liblua5.4-0:arm64 (5.4.6-3) ... 385s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 385s Setting up libthai-data (0.1.29-2) ... 385s Setting up node-bootstrap-sass (3.4.3-2) ... 385s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 385s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 385s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 385s Setting up pandoc-data (3.1.3-1) ... 385s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 385s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 385s Setting up libisl23:arm64 (0.26-3) ... 385s Setting up libc-dev-bin (2.39-0ubuntu2) ... 385s Setting up node-normalize.css (8.0.1-5) ... 385s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 385s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 385s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 385s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 385s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 385s Setting up libblas-dev:arm64 (3.12.0-3) ... 385s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 385s Setting up dctrl-tools (2.24-3build2) ... 385s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 385s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 385s Setting up libsynctex2:arm64 (2023.20230311.66589-9) ... 385s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 385s Setting up libpotrace0:arm64 (1.16-2) ... 385s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 385s Setting up libice6:arm64 (2:1.0.10-1build2) ... 385s Setting up liblapack3:arm64 (3.12.0-3) ... 385s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 385s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 385s Setting up libcurl4t64:arm64 (8.5.0-2ubuntu7) ... 385s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 387s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 387s Setting up libbibtex-parser-perl (1.04+dfsg-1) ... 387s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 387s Setting up pkgconf:arm64 (1.8.1-2) ... 387s Setting up libthai0:arm64 (0.1.29-2) ... 387s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 387s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 387s Setting up libptexenc1:arm64 (2023.20230311.66589-9) ... 387s Setting up pandoc (3.1.3+ds-2) ... 387s Setting up liblapack-dev:arm64 (3.12.0-3) ... 387s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 387s Setting up pkg-config:arm64 (1.8.1-2) ... 387s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ... 387s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 387s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 387s Setting up curl (8.5.0-2ubuntu7) ... 387s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 387s Setting up libgfortran-13-dev:arm64 (13.2.0-17ubuntu2) ... 387s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 387s Setting up libicu-dev:arm64 (74.2-1ubuntu1) ... 387s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ... 387s Setting up libbz2-dev:arm64 (1.0.8-5ubuntu1) ... 387s Setting up fontconfig (2.15.0-1ubuntu1) ... 389s Regenerating fonts cache... done. 389s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu1) ... 389s Setting up libxft2:arm64 (2.3.6-1) ... 389s Setting up libncurses-dev:arm64 (6.4+20240113-1ubuntu1) ... 389s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ... 389s Setting up cpp-13 (13.2.0-17ubuntu2) ... 389s Setting up libtk8.6:arm64 (8.6.13-2) ... 389s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ... 389s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 389s Setting up libreadline-dev:arm64 (8.2-3.1) ... 389s Setting up libcairo2:arm64 (1.18.0-1) ... 389s Setting up libxt6t64:arm64 (1:1.2.1-1.2) ... 389s Setting up gcc-13 (13.2.0-17ubuntu2) ... 389s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 389s Setting up cpp (4:13.2.0-7ubuntu1) ... 389s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ... 389s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 389s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ... 389s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 389s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 389s Setting up g++-13 (13.2.0-17ubuntu2) ... 389s Setting up libxmu6:arm64 (2:1.1.3-3) ... 389s Setting up libpng-dev:arm64 (1.6.43-3) ... 389s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 389s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ... 389s Setting up libxaw7:arm64 (2:1.0.14-1) ... 389s Setting 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size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 395s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 396s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 398s Setting up r-cran-magrittr (2.0.3-1) ... 398s Setting up r-cran-rappdirs (0.3.3-1) ... 398s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 398s Setting up r-cran-littler (0.3.19-1) ... 398s Setting up r-cran-fs (1.6.3+dfsg-1) ... 398s Setting up r-cran-rcpp (1.0.12-1) ... 398s Setting up r-cran-curl (5.2.0+dfsg-1) ... 398s Setting up r-bioc-biocgenerics (0.48.1-2) ... 398s Setting up r-cran-rlang (1.1.3-1) ... 398s Setting up littler (0.3.19-1) ... 398s Setting up r-cran-xfun (0.41+dfsg-1) ... 398s Setting up r-cran-sys (3.4.2-1) ... 398s Setting up r-cran-plogr (0.2.0-3build1) ... 398s Setting up r-cran-withr (2.5.0-1) ... 398s Setting up r-cran-mime (0.12-1) ... 398s Setting up r-cran-base64enc (0.1-3-3) ... 398s Setting 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auto mode 398s Setting up r-cran-cachem (1.0.8-1) ... 398s Setting up build-essential (12.10ubuntu1) ... 398s Setting up r-bioc-iranges (2.36.0-1) ... 398s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 398s Setting up r-cran-vctrs (0.6.5-1) ... 398s Setting up r-bioc-graph (1.80.0-1) ... 398s Setting up r-cran-ellipsis (0.3.2-2) ... 398s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 398s Setting up r-base-dev (4.3.3-2build1) ... 398s Setting up r-cran-stringr (1.5.1-1) ... 398s Setting up texlive-bibtex-extra (2023.20240207-1) ... 398s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 398s Setting up r-cran-httr (1.4.7+dfsg-1) ... 398s Setting up r-cran-memoise (2.0.1-1) ... 398s Setting up r-cran-promises (1.2.1+dfsg-1) ... 398s Setting up r-cran-blob (1.2.4-1) ... 398s Setting up r-cran-htmltools (0.5.7-1) ... 398s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 398s Setting up r-bioc-xvector (0.42.0-1) ... 398s Setting up r-cran-sass (0.4.8+dfsg-1) ... 398s Setting up r-cran-rsqlite (2.3.4-1) ... 398s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 398s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 398s Setting up r-cran-fontawesome (0.5.2-1) ... 398s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 398s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 398s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 398s Setting up r-bioc-annotationdbi (1.64.1-1) ... 398s Setting up r-bioc-go.db (3.18.0-1) ... 398s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 398s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 398s Setting up r-cran-bookdown (0.37+dfsg-1) ... 398s Setting up r-bioc-org.hs.eg.db (3.18.0-1) ... 398s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 398s Setting up autopkgtest-satdep (0) ... 398s Processing triggers for man-db (2.12.0-3) ... 401s Processing triggers for install-info (7.1-3) ... 401s Processing triggers for libc-bin (2.39-0ubuntu2) ... 402s Processing triggers for tex-common (6.18) ... 403s Running updmap-sys. This may take some time... done. 403s Running mktexlsr /var/lib/texmf ... done. 404s Building format(s) --all. 520s This may take some time... done. 548s (Reading database ... 104519 files and directories currently installed.) 548s Removing autopkgtest-satdep (0) ... 549s autopkgtest [17:29:14]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 549s autopkgtest [17:29:14]: test pkg-r-autopkgtest: [----------------------- 550s Test: Try to load the R library AnnotationDbi 550s 550s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 550s Copyright (C) 2024 The R Foundation for Statistical Computing 550s Platform: aarch64-unknown-linux-gnu (64-bit) 550s 550s R is free software and comes with ABSOLUTELY NO WARRANTY. 550s You are welcome to redistribute it under certain conditions. 550s Type 'license()' or 'licence()' for distribution details. 550s 550s R is a collaborative project with many contributors. 550s Type 'contributors()' for more information and 550s 'citation()' on how to cite R or R packages in publications. 550s 550s Type 'demo()' for some demos, 'help()' for on-line help, or 550s 'help.start()' for an HTML browser interface to help. 550s Type 'q()' to quit R. 550s 550s > library('AnnotationDbi') 550s Loading required package: stats4 551s Loading required package: BiocGenerics 551s 551s Attaching package: ‘BiocGenerics’ 551s 551s The following objects are masked from ‘package:stats’: 551s 551s IQR, mad, sd, var, xtabs 551s 551s The following objects are masked from ‘package:base’: 551s 551s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 551s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 551s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 551s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 551s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 551s table, tapply, union, unique, unsplit, which.max, which.min 551s 551s Loading required package: Biobase 552s Welcome to Bioconductor 552s 552s Vignettes contain introductory material; view with 552s 'browseVignettes()'. To cite Bioconductor, see 552s 'citation("Biobase")', and for packages 'citation("pkgname")'. 552s 552s Loading required package: IRanges 552s Loading required package: S4Vectors 554s 554s Attaching package: ‘S4Vectors’ 554s 554s The following object is masked from ‘package:utils’: 554s 554s findMatches 554s 554s The following objects are masked from ‘package:base’: 554s 554s expand.grid, I, unname 554s 563s > 563s > 563s Other tests are currently unsupported! 563s They will be progressively added. 563s autopkgtest [17:29:28]: test pkg-r-autopkgtest: -----------------------] 564s autopkgtest [17:29:29]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 564s pkg-r-autopkgtest PASS 565s autopkgtest [17:29:30]: @@@@@@@@@@@@@@@@@@@@ summary 565s pkg-r-autopkgtest PASS 577s Creating nova instance adt-noble-arm64-r-bioc-annotationdbi-20240316-172004-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240316.img (UUID 9d2e92bf-2787-45c2-ae22-99fb4bcc175e)...