0s autopkgtest [11:31:39]: starting date and time: 2024-03-19 11:31:39+0000 0s autopkgtest [11:31:39]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [11:31:39]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.iau4orlw/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3.11,src:db5.3,src:openssl,src:readline --apt-upgrade python-deeptoolsintervals --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3.11/3.11.8-1build4 db5.3/5.3.28+dfsg2-5build1 openssl/3.0.13-0ubuntu2 readline/8.2-3.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-arm64-18.secgroup --name adt-noble-arm64-python-deeptoolsintervals-20240319-111755-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 154s autopkgtest [11:34:13]: testbed dpkg architecture: arm64 154s autopkgtest [11:34:13]: testbed apt version: 2.7.12 154s autopkgtest [11:34:13]: @@@@@@@@@@@@@@@@@@@@ test bed setup 155s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 156s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3768 kB] 156s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [486 kB] 156s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.7 kB] 156s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 157s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [659 kB] 157s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 157s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 157s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 157s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4142 kB] 157s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 157s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [56.7 kB] 157s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 159s Fetched 9334 kB in 2s (3816 kB/s) 159s Reading package lists... 162s Reading package lists... 162s Building dependency tree... 162s Reading state information... 162s Calculating upgrade... 162s The following packages will be REMOVED: 162s libdb5.3 libreadline8 libssl3 162s The following NEW packages will be installed: 162s libdb5.3t64 libreadline8t64 libssl3t64 162s The following packages will be upgraded: 162s libpython3.11-minimal libpython3.11-stdlib openssl python3.11 162s python3.11-minimal readline-common 163s 6 upgraded, 3 newly installed, 3 to remove and 0 not upgraded. 163s Need to get 9085 kB of archives. 163s After this operation, 333 kB of additional disk space will be used. 163s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu2 [985 kB] 163s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu2 [1793 kB] 163s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3.11 arm64 3.11.8-1build4 [589 kB] 163s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3.11-minimal arm64 3.11.8-1build4 [2049 kB] 163s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpython3.11-minimal arm64 3.11.8-1build4 [838 kB] 163s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 163s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpython3.11-stdlib arm64 3.11.8-1build4 [1902 kB] 164s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-5build1 [719 kB] 164s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 164s Fetched 9085 kB in 1s (8346 kB/s) 164s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 164s Preparing to unpack .../openssl_3.0.13-0ubuntu2_arm64.deb ... 164s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 164s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 164s wget depends on libssl3 (>= 3.0.0). 164s u-boot-tools depends on libssl3 (>= 3.0.0). 164s tnftp depends on libssl3 (>= 3.0.0). 164s tcpdump depends on libssl3 (>= 3.0.0). 164s systemd-resolved depends on libssl3 (>= 3.0.0). 164s systemd depends on libssl3 (>= 3.0.0). 164s sudo depends on libssl3 (>= 3.0.0). 164s sbsigntool depends on libssl3 (>= 3.0.0). 164s rsync depends on libssl3 (>= 3.0.0). 164s python3-cryptography depends on libssl3 (>= 3.0.0). 164s openssh-server depends on libssl3 (>= 3.0.10). 164s openssh-client depends on libssl3 (>= 3.0.10). 164s mtd-utils depends on libssl3 (>= 3.0.0). 164s mokutil depends on libssl3 (>= 3.0.0). 164s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 164s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 164s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 164s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 164s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 164s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 164s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 164s libnvme1 depends on libssl3 (>= 3.0.0). 164s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 164s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 164s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 164s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 164s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 164s kmod depends on libssl3 (>= 3.0.0). 164s dhcpcd-base depends on libssl3 (>= 3.0.0). 164s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 164s 164s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 164s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 164s Selecting previously unselected package libssl3t64:arm64. 164s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75839 files and directories currently installed.) 164s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_arm64.deb ... 164s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu2) ... 164s Preparing to unpack .../python3.11_3.11.8-1build4_arm64.deb ... 164s Unpacking python3.11 (3.11.8-1build4) over (3.11.8-1) ... 164s Preparing to unpack .../python3.11-minimal_3.11.8-1build4_arm64.deb ... 164s Unpacking python3.11-minimal (3.11.8-1build4) over (3.11.8-1) ... 164s Preparing to unpack .../libpython3.11-minimal_3.11.8-1build4_arm64.deb ... 164s Unpacking libpython3.11-minimal:arm64 (3.11.8-1build4) over (3.11.8-1) ... 165s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 165s parted depends on libreadline8 (>= 6.0). 165s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 165s libpython3.11-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 165s gpgsm depends on libreadline8 (>= 6.0). 165s gpgconf depends on libreadline8 (>= 6.0). 165s gpg depends on libreadline8 (>= 6.0). 165s gawk depends on libreadline8 (>= 6.0). 165s fdisk depends on libreadline8 (>= 6.0). 165s 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75852 files and directories currently installed.) 165s Removing libreadline8:arm64 (8.2-3) ... 165s Selecting previously unselected package libreadline8t64:arm64. 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75840 files and directories currently installed.) 165s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 165s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 165s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 165s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 165s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 165s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 165s Preparing to unpack .../libpython3.11-stdlib_3.11.8-1build4_arm64.deb ... 165s Unpacking libpython3.11-stdlib:arm64 (3.11.8-1build4) over (3.11.8-1) ... 165s dpkg: libdb5.3:arm64: dependency problems, but removing anyway as you requested: 165s libsasl2-modules-db:arm64 depends on libdb5.3. 165s libpython3.12-stdlib:arm64 depends on libdb5.3. 165s libperl5.38:arm64 depends on libdb5.3. 165s libpam-modules:arm64 depends on libdb5.3. 165s iproute2 depends on libdb5.3. 165s apt-utils depends on libdb5.3. 165s 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 165s Removing libdb5.3:arm64 (5.3.28+dfsg2-4) ... 165s Selecting previously unselected package libdb5.3t64:arm64. 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75852 files and directories currently installed.) 165s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-5build1_arm64.deb ... 165s Unpacking libdb5.3t64:arm64 (5.3.28+dfsg2-5build1) ... 165s Setting up libdb5.3t64:arm64 (5.3.28+dfsg2-5build1) ... 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 165s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 165s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 165s Setting up libssl3t64:arm64 (3.0.13-0ubuntu2) ... 165s Setting up libpython3.11-minimal:arm64 (3.11.8-1build4) ... 165s Setting up openssl (3.0.13-0ubuntu2) ... 165s Setting up readline-common (8.2-3.1) ... 165s Setting up python3.11-minimal (3.11.8-1build4) ... 166s Setting up libreadline8t64:arm64 (8.2-3.1) ... 166s Setting up libpython3.11-stdlib:arm64 (3.11.8-1build4) ... 166s Setting up python3.11 (3.11.8-1build4) ... 167s Processing triggers for systemd (255.2-3ubuntu2) ... 167s Processing triggers for man-db (2.12.0-3) ... 167s Processing triggers for install-info (7.1-3) ... 167s Processing triggers for libc-bin (2.39-0ubuntu2) ... 168s Reading package lists... 168s Building dependency tree... 168s Reading state information... 168s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 169s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 169s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 169s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 169s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 170s Reading package lists... 170s Reading package lists... 170s Building dependency tree... 170s Reading state information... 171s Calculating upgrade... 171s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 171s Reading package lists... 171s Building dependency tree... 171s Reading state information... 172s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 174s autopkgtest [11:34:33]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 175s autopkgtest [11:34:34]: @@@@@@@@@@@@@@@@@@@@ apt-source python-deeptoolsintervals 176s Get:1 http://ftpmaster.internal/ubuntu noble/universe python-deeptoolsintervals 0.1.9-3build7 (dsc) [2294 B] 176s Get:2 http://ftpmaster.internal/ubuntu noble/universe python-deeptoolsintervals 0.1.9-3build7 (tar) [40.8 kB] 176s Get:3 http://ftpmaster.internal/ubuntu noble/universe python-deeptoolsintervals 0.1.9-3build7 (diff) [3576 B] 176s gpgv: Signature made Tue Oct 31 17:40:37 2023 UTC 176s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 176s gpgv: Can't check signature: No public key 176s dpkg-source: warning: cannot verify inline signature for ./python-deeptoolsintervals_0.1.9-3build7.dsc: no acceptable signature found 176s autopkgtest [11:34:35]: testing package python-deeptoolsintervals version 0.1.9-3build7 177s autopkgtest [11:34:36]: build not needed 178s autopkgtest [11:34:37]: test run-unit-test: preparing testbed 180s Reading package lists... 181s Building dependency tree... 181s Reading state information... 181s Starting pkgProblemResolver with broken count: 0 181s Starting 2 pkgProblemResolver with broken count: 0 181s Done 182s The following additional packages will be installed: 182s libpython3.11 libpython3.12 python3-all python3-deeptoolsintervals 182s python3-iniconfig python3-packaging python3-pluggy python3-pytest 182s Suggested packages: 182s python-python-deeptoolsintervals-doc 182s The following NEW packages will be installed: 182s autopkgtest-satdep libpython3.11 libpython3.12 python3-all 182s python3-deeptoolsintervals python3-iniconfig python3-packaging 182s python3-pluggy python3-pytest 182s 0 upgraded, 9 newly installed, 0 to remove and 0 not upgraded. 182s Need to get 4853 kB/4854 kB of archives. 182s After this operation, 18.8 MB of additional disk space will be used. 182s Get:1 /tmp/autopkgtest.gjas4c/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [728 B] 182s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpython3.11 arm64 3.11.8-1build4 [2134 kB] 182s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12 arm64 3.12.2-1 [2291 kB] 183s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 python3-all arm64 3.12.1-0ubuntu2 [906 B] 183s Get:5 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-deeptoolsintervals arm64 0.1.9-3build7 [55.7 kB] 183s Get:6 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 183s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 python3-packaging all 23.2-1 [40.6 kB] 183s Get:8 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pluggy all 1.4.0-1 [20.4 kB] 183s Get:9 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pytest all 7.4.4-1 [305 kB] 183s Fetched 4853 kB in 1s (5366 kB/s) 183s Selecting previously unselected package libpython3.11:arm64. 183s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 183s Preparing to unpack .../0-libpython3.11_3.11.8-1build4_arm64.deb ... 183s Unpacking libpython3.11:arm64 (3.11.8-1build4) ... 183s Selecting previously unselected package libpython3.12:arm64. 183s Preparing to unpack .../1-libpython3.12_3.12.2-1_arm64.deb ... 183s Unpacking libpython3.12:arm64 (3.12.2-1) ... 183s Selecting previously unselected package python3-all. 183s Preparing to unpack .../2-python3-all_3.12.1-0ubuntu2_arm64.deb ... 183s Unpacking python3-all (3.12.1-0ubuntu2) ... 183s Selecting previously unselected package python3-deeptoolsintervals. 183s Preparing to unpack .../3-python3-deeptoolsintervals_0.1.9-3build7_arm64.deb ... 183s Unpacking python3-deeptoolsintervals (0.1.9-3build7) ... 183s Selecting previously unselected package python3-iniconfig. 183s Preparing to unpack .../4-python3-iniconfig_1.1.1-2_all.deb ... 183s Unpacking python3-iniconfig (1.1.1-2) ... 183s Selecting previously unselected package python3-packaging. 183s Preparing to unpack .../5-python3-packaging_23.2-1_all.deb ... 183s Unpacking python3-packaging (23.2-1) ... 183s Selecting previously unselected package python3-pluggy. 183s Preparing to unpack .../6-python3-pluggy_1.4.0-1_all.deb ... 183s Unpacking python3-pluggy (1.4.0-1) ... 183s Selecting previously unselected package python3-pytest. 183s Preparing to unpack .../7-python3-pytest_7.4.4-1_all.deb ... 183s Unpacking python3-pytest (7.4.4-1) ... 183s Selecting previously unselected package autopkgtest-satdep. 183s Preparing to unpack .../8-1-autopkgtest-satdep.deb ... 183s Unpacking autopkgtest-satdep (0) ... 183s Setting up python3-iniconfig (1.1.1-2) ... 183s Setting up libpython3.11:arm64 (3.11.8-1build4) ... 183s Setting up python3-all (3.12.1-0ubuntu2) ... 183s Setting up python3-packaging (23.2-1) ... 183s Setting up python3-pluggy (1.4.0-1) ... 184s Setting up libpython3.12:arm64 (3.12.2-1) ... 184s Setting up python3-deeptoolsintervals (0.1.9-3build7) ... 184s Setting up python3-pytest (7.4.4-1) ... 184s Setting up autopkgtest-satdep (0) ... 184s Processing triggers for man-db (2.12.0-3) ... 184s Processing triggers for libc-bin (2.39-0ubuntu2) ... 187s (Reading database ... 76072 files and directories currently installed.) 187s Removing autopkgtest-satdep (0) ... 188s autopkgtest [11:34:47]: test run-unit-test: [----------------------- 188s GRCh38.84.2.gtf.gz 188s GRCh38.84.bed 188s GRCh38.84.bed12.bz2 188s GRCh38.84.bed2 188s GRCh38.84.bed6 188s GRCh38.84.gtf.gz 188s GRCh38.84.labels.bed 188s noOverlaps.bed 188s sample_test.py 188s strands.bed 188s Run sample test .... 188s ============================= test session starts ============================== 188s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 -- /usr/bin/python3 188s cachedir: .pytest_cache 188s rootdir: /tmp/autopkgtest.gjas4c/autopkgtest_tmp 188s collecting ... collected 1 item 188s 188s sample_test.py::test_functionality PASSED [100%] 188s 188s ============================== 1 passed in 0.02s =============================== 189s autopkgtest [11:34:48]: test run-unit-test: -----------------------] 189s autopkgtest [11:34:48]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 189s run-unit-test PASS 190s autopkgtest [11:34:49]: test autodep8-python3: preparing testbed 428s autopkgtest [11:38:47]: testbed dpkg architecture: arm64 428s autopkgtest [11:38:47]: testbed apt version: 2.7.12 428s autopkgtest [11:38:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup 429s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 430s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.7 kB] 430s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3768 kB] 431s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 431s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [486 kB] 431s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [659 kB] 431s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 431s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 431s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 431s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4142 kB] 431s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 431s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [56.7 kB] 431s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 437s Fetched 9334 kB in 3s (2991 kB/s) 437s Reading package lists... 441s Reading package lists... 442s Building dependency tree... 442s Reading state information... 443s Calculating upgrade... 444s The following packages will be REMOVED: 444s libdb5.3 libreadline8 libssl3 444s The following NEW packages will be installed: 444s libdb5.3t64 libreadline8t64 libssl3t64 444s The following packages will be upgraded: 444s libpython3.11-minimal libpython3.11-stdlib openssl python3.11 444s python3.11-minimal readline-common 444s 6 upgraded, 3 newly installed, 3 to remove and 0 not upgraded. 444s Need to get 9085 kB of archives. 444s After this operation, 333 kB of additional disk space will be used. 444s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu2 [985 kB] 445s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu2 [1793 kB] 445s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3.11 arm64 3.11.8-1build4 [589 kB] 445s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3.11-minimal arm64 3.11.8-1build4 [2049 kB] 445s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpython3.11-minimal arm64 3.11.8-1build4 [838 kB] 445s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 445s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpython3.11-stdlib arm64 3.11.8-1build4 [1902 kB] 445s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-5build1 [719 kB] 445s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 446s Fetched 9085 kB in 1s (9051 kB/s) 446s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 446s Preparing to unpack .../openssl_3.0.13-0ubuntu2_arm64.deb ... 446s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 446s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 446s wget depends on libssl3 (>= 3.0.0). 446s u-boot-tools depends on libssl3 (>= 3.0.0). 446s tnftp depends on libssl3 (>= 3.0.0). 446s tcpdump depends on libssl3 (>= 3.0.0). 446s systemd-resolved depends on libssl3 (>= 3.0.0). 446s systemd depends on libssl3 (>= 3.0.0). 446s sudo depends on libssl3 (>= 3.0.0). 446s sbsigntool depends on libssl3 (>= 3.0.0). 446s rsync depends on libssl3 (>= 3.0.0). 447s python3-cryptography depends on libssl3 (>= 3.0.0). 447s openssh-server depends on libssl3 (>= 3.0.10). 447s openssh-client depends on libssl3 (>= 3.0.10). 447s mtd-utils depends on libssl3 (>= 3.0.0). 447s mokutil depends on libssl3 (>= 3.0.0). 447s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 447s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 447s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 447s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 447s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 447s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 447s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 447s libnvme1 depends on libssl3 (>= 3.0.0). 447s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 447s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 447s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 447s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 447s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 447s kmod depends on libssl3 (>= 3.0.0). 447s dhcpcd-base depends on libssl3 (>= 3.0.0). 447s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 447s 447s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 447s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 447s Selecting previously unselected package libssl3t64:arm64. 447s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75839 files and directories currently installed.) 447s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_arm64.deb ... 447s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu2) ... 447s Preparing to unpack .../python3.11_3.11.8-1build4_arm64.deb ... 447s Unpacking python3.11 (3.11.8-1build4) over (3.11.8-1) ... 447s Preparing to unpack .../python3.11-minimal_3.11.8-1build4_arm64.deb ... 447s Unpacking python3.11-minimal (3.11.8-1build4) over (3.11.8-1) ... 447s Preparing to unpack .../libpython3.11-minimal_3.11.8-1build4_arm64.deb ... 447s Unpacking libpython3.11-minimal:arm64 (3.11.8-1build4) over (3.11.8-1) ... 448s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 448s parted depends on libreadline8 (>= 6.0). 448s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 448s libpython3.11-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 448s gpgsm depends on libreadline8 (>= 6.0). 448s gpgconf depends on libreadline8 (>= 6.0). 448s gpg depends on libreadline8 (>= 6.0). 448s gawk depends on libreadline8 (>= 6.0). 448s fdisk depends on libreadline8 (>= 6.0). 448s 448s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75852 files and directories currently installed.) 448s Removing libreadline8:arm64 (8.2-3) ... 448s Selecting previously unselected package libreadline8t64:arm64. 448s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75840 files and directories currently installed.) 448s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 448s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 448s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 448s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 448s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 448s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 448s Preparing to unpack .../libpython3.11-stdlib_3.11.8-1build4_arm64.deb ... 448s Unpacking libpython3.11-stdlib:arm64 (3.11.8-1build4) over (3.11.8-1) ... 448s dpkg: libdb5.3:arm64: dependency problems, but removing anyway as you requested: 448s libsasl2-modules-db:arm64 depends on libdb5.3. 448s libpython3.12-stdlib:arm64 depends on libdb5.3. 448s libperl5.38:arm64 depends on libdb5.3. 448s libpam-modules:arm64 depends on libdb5.3. 448s iproute2 depends on libdb5.3. 448s apt-utils depends on libdb5.3. 448s 448s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 448s Removing libdb5.3:arm64 (5.3.28+dfsg2-4) ... 448s Selecting previously unselected package libdb5.3t64:arm64. 448s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75852 files and directories currently installed.) 448s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-5build1_arm64.deb ... 448s Unpacking libdb5.3t64:arm64 (5.3.28+dfsg2-5build1) ... 449s Setting up libdb5.3t64:arm64 (5.3.28+dfsg2-5build1) ... 449s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 449s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 449s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 449s Setting up libssl3t64:arm64 (3.0.13-0ubuntu2) ... 449s Setting up libpython3.11-minimal:arm64 (3.11.8-1build4) ... 449s Setting up openssl (3.0.13-0ubuntu2) ... 449s Setting up readline-common (8.2-3.1) ... 449s Setting up python3.11-minimal (3.11.8-1build4) ... 451s Setting up libreadline8t64:arm64 (8.2-3.1) ... 451s Setting up libpython3.11-stdlib:arm64 (3.11.8-1build4) ... 451s Setting up python3.11 (3.11.8-1build4) ... 453s Processing triggers for systemd (255.2-3ubuntu2) ... 453s Processing triggers for man-db (2.12.0-3) ... 454s Processing triggers for install-info (7.1-3) ... 454s Processing triggers for libc-bin (2.39-0ubuntu2) ... 455s Reading package lists... 455s Building dependency tree... 455s Reading state information... 457s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 457s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 458s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 458s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 458s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 461s Reading package lists... 461s Reading package lists... 462s Building dependency tree... 462s Reading state information... 463s Calculating upgrade... 464s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 464s Reading package lists... 464s Building dependency tree... 464s Reading state information... 466s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 473s Reading package lists... 473s Building dependency tree... 473s Reading state information... 474s Starting pkgProblemResolver with broken count: 0 474s Starting 2 pkgProblemResolver with broken count: 0 474s Done 476s The following additional packages will be installed: 476s libpython3.11 libpython3.12 python3-all python3-deeptoolsintervals 476s Suggested packages: 476s python-python-deeptoolsintervals-doc 476s The following NEW packages will be installed: 476s autopkgtest-satdep libpython3.11 libpython3.12 python3-all 476s python3-deeptoolsintervals 476s 0 upgraded, 5 newly installed, 0 to remove and 0 not upgraded. 476s Need to get 4481 kB/4482 kB of archives. 476s After this operation, 17.2 MB of additional disk space will be used. 476s Get:1 /tmp/autopkgtest.gjas4c/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [728 B] 476s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpython3.11 arm64 3.11.8-1build4 [2134 kB] 477s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12 arm64 3.12.2-1 [2291 kB] 478s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 python3-all arm64 3.12.1-0ubuntu2 [906 B] 478s Get:5 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-deeptoolsintervals arm64 0.1.9-3build7 [55.7 kB] 479s Fetched 4481 kB in 2s (1927 kB/s) 479s Selecting previously unselected package libpython3.11:arm64. 479s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 479s Preparing to unpack .../libpython3.11_3.11.8-1build4_arm64.deb ... 479s Unpacking libpython3.11:arm64 (3.11.8-1build4) ... 479s Selecting previously unselected package libpython3.12:arm64. 479s Preparing to unpack .../libpython3.12_3.12.2-1_arm64.deb ... 479s Unpacking libpython3.12:arm64 (3.12.2-1) ... 479s Selecting previously unselected package python3-all. 479s Preparing to unpack .../python3-all_3.12.1-0ubuntu2_arm64.deb ... 479s Unpacking python3-all (3.12.1-0ubuntu2) ... 479s Selecting previously unselected package python3-deeptoolsintervals. 479s Preparing to unpack .../python3-deeptoolsintervals_0.1.9-3build7_arm64.deb ... 479s Unpacking python3-deeptoolsintervals (0.1.9-3build7) ... 479s Selecting previously unselected package autopkgtest-satdep. 479s Preparing to unpack .../2-autopkgtest-satdep.deb ... 479s Unpacking autopkgtest-satdep (0) ... 479s Setting up libpython3.11:arm64 (3.11.8-1build4) ... 479s Setting up python3-all (3.12.1-0ubuntu2) ... 479s Setting up libpython3.12:arm64 (3.12.2-1) ... 479s Setting up python3-deeptoolsintervals (0.1.9-3build7) ... 480s Setting up autopkgtest-satdep (0) ... 480s Processing triggers for libc-bin (2.39-0ubuntu2) ... 485s (Reading database ... 75908 files and directories currently installed.) 485s Removing autopkgtest-satdep (0) ... 488s autopkgtest [11:39:47]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import deeptoolsintervals; print(deeptoolsintervals)" ; done 488s autopkgtest [11:39:47]: test autodep8-python3: [----------------------- 489s Testing with python3.12: 489s 489s autopkgtest [11:39:48]: test autodep8-python3: -----------------------] 490s autopkgtest [11:39:49]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 490s autodep8-python3 PASS (superficial) 490s autopkgtest [11:39:49]: @@@@@@@@@@@@@@@@@@@@ summary 490s run-unit-test PASS 490s autodep8-python3 PASS (superficial) 530s Creating nova instance adt-noble-arm64-python-deeptoolsintervals-20240319-111755-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240319.img (UUID bd25b89b-8264-4402-95d9-d9c88f21f275)... 530s Creating nova instance adt-noble-arm64-python-deeptoolsintervals-20240319-111755-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240319.img (UUID bd25b89b-8264-4402-95d9-d9c88f21f275)...