0s autopkgtest [17:20:12]: starting date and time: 2024-03-24 17:20:12+0000 0s autopkgtest [17:20:12]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [17:20:12]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9u_bd3fu/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:python-pysam,src:curl,src:gnutls28,src:htslib,src:libpsl,src:nettle,src:openssl --apt-upgrade pychopper --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python-pysam/0.22.0+ds-1build1 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 htslib/1.19+ds-1.1build2 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-arm64-28.secgroup --name adt-noble-arm64-pychopper-20240324-170352-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 192s autopkgtest [17:23:24]: testbed dpkg architecture: arm64 192s autopkgtest [17:23:24]: testbed apt version: 2.7.12 192s autopkgtest [17:23:24]: @@@@@@@@@@@@@@@@@@@@ test bed setup 194s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 194s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [57.3 kB] 195s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3986 kB] 195s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB] 195s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 195s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [708 kB] 195s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 195s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.7 kB] 195s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 196s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4364 kB] 196s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 196s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [70.1 kB] 196s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 207s Fetched 9850 kB in 6s (1714 kB/s) 208s Reading package lists... 216s Reading package lists... 217s Building dependency tree... 217s Reading state information... 219s Calculating upgrade... 220s The following packages will be REMOVED: 220s libssl3 220s The following NEW packages will be installed: 220s libssl3t64 220s The following packages have been kept back: 220s curl 220s The following packages will be upgraded: 220s openssl 221s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 221s Need to get 2777 kB of archives. 221s After this operation, 139 kB of additional disk space will be used. 221s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu2 [985 kB] 221s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu2 [1793 kB] 223s Fetched 2777 kB in 1s (2784 kB/s) 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75911 files and directories currently installed.) 224s Preparing to unpack .../openssl_3.0.13-0ubuntu2_arm64.deb ... 224s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 225s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 225s wget depends on libssl3 (>= 3.0.0). 225s u-boot-tools depends on libssl3 (>= 3.0.0). 225s tnftp depends on libssl3 (>= 3.0.0). 225s tcpdump depends on libssl3 (>= 3.0.0). 225s systemd-resolved depends on libssl3 (>= 3.0.0). 225s systemd depends on libssl3 (>= 3.0.0). 225s sudo depends on libssl3 (>= 3.0.0). 225s sbsigntool depends on libssl3 (>= 3.0.0). 225s rsync depends on libssl3 (>= 3.0.0). 225s python3-cryptography depends on libssl3 (>= 3.0.0). 225s openssh-server depends on libssl3 (>= 3.0.10). 225s openssh-client depends on libssl3 (>= 3.0.10). 225s mtd-utils depends on libssl3 (>= 3.0.0). 225s mokutil depends on libssl3 (>= 3.0.0). 225s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 225s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 225s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 225s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 225s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 225s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 225s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 225s libnvme1 depends on libssl3 (>= 3.0.0). 225s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 225s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 225s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 225s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 225s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 225s kmod depends on libssl3 (>= 3.0.0). 225s dhcpcd-base depends on libssl3 (>= 3.0.0). 225s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 225s 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75911 files and directories currently installed.) 225s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 225s Selecting previously unselected package libssl3t64:arm64. 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75900 files and directories currently installed.) 225s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_arm64.deb ... 225s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu2) ... 226s Setting up libssl3t64:arm64 (3.0.13-0ubuntu2) ... 226s Setting up openssl (3.0.13-0ubuntu2) ... 226s Processing triggers for man-db (2.12.0-3) ... 228s Processing triggers for libc-bin (2.39-0ubuntu6) ... 229s Reading package lists... 230s Building dependency tree... 230s Reading state information... 233s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 235s sh: Attempting to set up Debian/Ubuntu apt sources automatically 235s sh: Distribution appears to be Ubuntu 238s Reading package lists... 239s Building dependency tree... 239s Reading state information... 241s eatmydata is already the newest version (131-1). 241s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 241s Reading package lists... 242s Building dependency tree... 242s Reading state information... 244s dbus is already the newest version (1.14.10-4ubuntu1). 244s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 244s Reading package lists... 244s Building dependency tree... 244s Reading state information... 246s rng-tools-debian is already the newest version (2.4). 246s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 247s Reading package lists... 247s Building dependency tree... 247s Reading state information... 249s The following packages will be REMOVED: 249s cloud-init* python3-configobj* python3-debconf* 250s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 250s After this operation, 3256 kB disk space will be freed. 251s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75913 files and directories currently installed.) 251s Removing cloud-init (24.1.2-0ubuntu1) ... 253s Removing python3-configobj (5.0.8-3) ... 253s Removing python3-debconf (1.5.86) ... 254s Processing triggers for man-db (2.12.0-3) ... 255s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75524 files and directories currently installed.) 255s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 258s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 258s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 258s invoke-rc.d: policy-rc.d denied execution of try-restart. 258s Reading package lists... 259s Building dependency tree... 259s Reading state information... 261s linux-generic is already the newest version (6.8.0-11.11+1). 261s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 262s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 262s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 262s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 274s Reading package lists... 274s Reading package lists... 275s Building dependency tree... 275s Reading state information... 277s Calculating upgrade... 278s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 278s Reading package lists... 279s Building dependency tree... 279s Reading state information... 282s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 282s autopkgtest [17:24:54]: rebooting testbed after setup commands that affected boot 465s autopkgtest [17:27:57]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 470s autopkgtest [17:28:02]: @@@@@@@@@@@@@@@@@@@@ apt-source pychopper 478s Get:1 http://ftpmaster.internal/ubuntu noble/universe pychopper 2.7.9-1 (dsc) [2807 B] 478s Get:2 http://ftpmaster.internal/ubuntu noble/universe pychopper 2.7.9-1 (tar) [62.5 MB] 478s Get:3 http://ftpmaster.internal/ubuntu noble/universe pychopper 2.7.9-1 (diff) [4724 B] 479s gpgv: Signature made Tue Dec 5 19:00:23 2023 UTC 479s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 479s gpgv: issuer "tille@debian.org" 479s gpgv: Can't check signature: No public key 479s dpkg-source: warning: cannot verify inline signature for ./pychopper_2.7.9-1.dsc: no acceptable signature found 485s autopkgtest [17:28:17]: testing package pychopper version 2.7.9-1 486s autopkgtest [17:28:18]: build not needed 500s autopkgtest [17:28:32]: test run-unit-test: preparing testbed 510s Reading package lists... 511s Building dependency tree... 511s Reading state information... 513s Starting pkgProblemResolver with broken count: 0 513s Starting 2 pkgProblemResolver with broken count: 0 513s Done 515s The following additional packages will be installed: 515s blt fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono 515s fonts-lyx fonts-urw-base35 libblas3 libcairo2 libdeflate0 libfontconfig1 515s libfontenc1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhts3 515s libhtscodecs2 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 515s libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libopenjp2-7 515s libparasail-dev libparasail8 libpixman-1-0 libqhull-r8.0 libraqm0 515s libsharpyuv0 libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 515s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 515s python-matplotlib-data python3-all python3-appdirs python3-biopython 515s python3-brotli python3-cairo python3-contourpy python3-cycler 515s python3-dateutil python3-decorator python3-edlib python3-fonttools 515s python3-freetype python3-fs python3-iniconfig python3-kiwisolver 515s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-numpy 515s python3-packaging python3-pandas python3-pandas-lib python3-parasail 515s python3-pil python3-pil.imagetk python3-pluggy python3-pychopper 515s python3-pysam python3-pytest python3-reportlab python3-rlpycairo 515s python3-scipy python3-sympy python3-tk python3-tqdm python3-ufolib2 515s python3-unicodedata2 python3-wheel sgml-base tk8.6-blt2.5 unicode-data 515s w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core 515s Suggested packages: 515s blt-demo fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 515s libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 bwa clustalo clustalw 515s dialign dssp emboss fasttree mafft muscle3 phylip phyml prank probcons 515s python3-mysqldb python3-mmtf python3-rdflib python3-psycopg2 raxml samtools 515s t-coffee wise python-cycler-doc python-lxml-doc cm-super-minimal dvipng 515s ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 515s librsvg2-common python3-cairocffi python3-gi-cairo python3-gobject 515s python3-pyqt5 python3-sip python3-tornado texlive-extra-utils 515s texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc gfortran python3-dev 515s python-pandas-doc python3-statsmodels python-pil-doc pdf-viewer 515s python3-egenix-mxtexttools python-reportlab-doc rl-accel rl-renderpm 515s python-scipy-doc texlive-fonts-extra python-sympy-doc tix python3-tk-dbg 515s sgml-base-doc debhelper 515s Recommended packages: 515s javascript-common python-biopython-doc ncbi-blast+ python3-bs4 515s python3-cssselect python3-html5lib python3-bottleneck python3-numexpr 515s python3-odf python3-openpyxl python3-tables python3-olefile g++ 515s | c++-compiler isympy-common 516s The following NEW packages will be installed: 516s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core 516s fonts-dejavu-extra fonts-dejavu-mono fonts-lyx fonts-urw-base35 libblas3 516s libcairo2 libdeflate0 libfontconfig1 libfontenc1 libgfortran5 libgomp1 516s libgraphite2-3 libharfbuzz0b libhts3 libhtscodecs2 libimagequant0 libjbig0 516s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 516s liblcms2-2 liblerc4 libopenjp2-7 libparasail-dev libparasail8 libpixman-1-0 516s libqhull-r8.0 libraqm0 libsharpyuv0 libtcl8.6 libtiff6 libtk8.6 libwebp7 516s libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 libxft2 libxrender1 516s libxslt1.1 libxss1 python-matplotlib-data python3-all python3-appdirs 516s python3-biopython python3-brotli python3-cairo python3-contourpy 516s python3-cycler python3-dateutil python3-decorator python3-edlib 516s python3-fonttools python3-freetype python3-fs python3-iniconfig 516s python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib 516s python3-mpmath python3-numpy python3-packaging python3-pandas 516s python3-pandas-lib python3-parasail python3-pil python3-pil.imagetk 516s python3-pluggy python3-pychopper python3-pysam python3-pytest 516s python3-reportlab python3-rlpycairo python3-scipy python3-sympy python3-tk 516s python3-tqdm python3-ufolib2 python3-unicodedata2 python3-wheel sgml-base 516s tk8.6-blt2.5 unicode-data w3c-sgml-lib x11-common xfonts-encodings 516s xfonts-utils xml-core 516s 0 upgraded, 96 newly installed, 0 to remove and 0 not upgraded. 516s Need to get 96.4 MB/96.4 MB of archives. 516s After this operation, 456 MB of additional disk space will be used. 516s Get:1 /tmp/autopkgtest.7Igcyq/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [724 B] 516s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 sgml-base all 1.31 [11.4 kB] 516s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 517s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 518s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 518s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libfontenc1 arm64 1:1.1.8-1 [13.9 kB] 518s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 518s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 518s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-utils arm64 1:7.7+6build2 [93.6 kB] 518s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-urw-base35 all 20200910-8 [11.0 MB] 521s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 521s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 521s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 521s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 521s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 521s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.14-1 [767 kB] 521s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7 [618 kB] 521s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 blt arm64 2.5.3+dfsg-7 [4826 B] 521s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-extra all 2.37-8 [1947 kB] 521s Get:20 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lyx all 2.4.0~RC3-1 [170 kB] 521s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 521s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 521s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 521s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 521s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 521s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 521s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 521s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 521s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 521s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 521s Get:31 http://ftpmaster.internal/ubuntu noble/universe arm64 libhtscodecs2 arm64 1.6.0-1 [78.1 kB] 521s Get:32 http://ftpmaster.internal/ubuntu noble/universe arm64 libhts3 arm64 1.18+ds-1 [422 kB] 521s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libimagequant0 arm64 2.18.0-1 [37.0 kB] 521s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 521s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 521s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 521s Get:37 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 521s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 522s Get:39 http://ftpmaster.internal/ubuntu noble/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1 [27.7 kB] 522s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 liblcms2-2 arm64 2.14-2 [159 kB] 522s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 522s Get:42 http://ftpmaster.internal/ubuntu noble/universe arm64 libparasail8 arm64 2.6.2+dfsg-1 [511 kB] 522s Get:43 http://ftpmaster.internal/ubuntu noble/universe arm64 libparasail-dev arm64 2.6.2+dfsg-1 [185 kB] 522s Get:44 http://ftpmaster.internal/ubuntu noble/universe arm64 libqhull-r8.0 arm64 2020.2-6 [188 kB] 522s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libraqm0 arm64 0.10.1-1 [14.4 kB] 522s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 522s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 522s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 522s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 522s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpdemux2 arm64 1.3.2-0.4 [12.3 kB] 522s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpmux3 arm64 1.3.2-0.4 [25.0 kB] 522s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libxslt1.1 arm64 1.1.39-0exp1 [166 kB] 522s Get:53 http://ftpmaster.internal/ubuntu noble/universe arm64 python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] 522s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 python3-all arm64 3.12.1-0ubuntu2 [906 B] 522s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB] 522s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 python3-numpy arm64 1:1.24.2-2 [4525 kB] 522s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 python3-tk arm64 3.11.5-1 [112 kB] 522s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pil.imagetk arm64 10.2.0-1 [9708 B] 522s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libopenjp2-7 arm64 2.5.0-2 [170 kB] 522s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 python3-pil arm64 10.2.0-1 [477 kB] 522s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 python3-cairo arm64 1.25.1-2 [153 kB] 522s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-freetype all 2.4.0-1 [83.1 kB] 522s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-rlpycairo all 0.3.0-3 [9130 B] 522s Get:64 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-reportlab all 4.1.0-1 [683 kB] 522s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 xml-core all 0.19 [20.3 kB] 522s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 w3c-sgml-lib all 1.3-3 [280 kB] 522s Get:67 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-biopython arm64 1.81+dfsg-3 [1664 kB] 522s Get:68 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-brotli arm64 1.1.0-2 [345 kB] 522s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-contourpy arm64 1.0.7-1build2 [244 kB] 522s Get:70 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-cycler all 0.11.0-2 [8202 B] 522s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 python3-dateutil all 2.8.2-3 [79.2 kB] 523s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 523s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-edlib arm64 1.2.7-5 [99.2 kB] 523s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-scipy arm64 1.11.4-6 [18.6 MB] 524s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 524s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-mpmath all 1.2.1-3 [421 kB] 524s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-sympy all 1.12-7 [3966 kB] 524s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fs all 2.4.16-3 [91.1 kB] 524s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 python3-lxml arm64 5.1.0-1 [2042 kB] 524s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build2 [28.4 kB] 524s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-unicodedata2 arm64 15.1.0+ds-1 [362 kB] 524s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 unicode-data all 15.1.0-1 [8878 kB] 525s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fonttools arm64 4.46.0-1 [1625 kB] 525s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 525s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-kiwisolver arm64 1.4.4-2 [48.5 kB] 525s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 python3-packaging all 23.2-1 [40.6 kB] 525s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-matplotlib arm64 3.6.3-1ubuntu3 [7291 kB] 525s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pandas-lib arm64 2.1.4+dfsg-4ubuntu2 [7669 kB] 526s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pandas all 2.1.4+dfsg-4ubuntu2 [3042 kB] 526s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-wheel all 0.42.0-1 [53.1 kB] 526s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-parasail all 1.3.3-1 [40.5 kB] 526s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pluggy all 1.4.0-1 [20.4 kB] 526s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pysam arm64 0.22.0+ds-1 [4399 kB] 527s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pytest all 7.4.4-1 [305 kB] 527s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-tqdm all 4.64.1-2 [95.2 kB] 527s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pychopper all 2.7.9-1 [150 kB] 529s Fetched 96.4 MB in 11s (8966 kB/s) 529s Selecting previously unselected package sgml-base. 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75469 files and directories currently installed.) 529s Preparing to unpack .../00-sgml-base_1.31_all.deb ... 529s Unpacking sgml-base (1.31) ... 529s Selecting previously unselected package libtcl8.6:arm64. 529s Preparing to unpack .../01-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 529s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 530s Selecting previously unselected package fonts-dejavu-mono. 530s Preparing to unpack .../02-fonts-dejavu-mono_2.37-8_all.deb ... 530s Unpacking fonts-dejavu-mono (2.37-8) ... 530s Selecting previously unselected package fonts-dejavu-core. 530s Preparing to unpack .../03-fonts-dejavu-core_2.37-8_all.deb ... 530s Unpacking fonts-dejavu-core (2.37-8) ... 530s Selecting previously unselected package libfontenc1:arm64. 530s Preparing to unpack .../04-libfontenc1_1%3a1.1.8-1_arm64.deb ... 530s Unpacking libfontenc1:arm64 (1:1.1.8-1) ... 530s Selecting previously unselected package x11-common. 530s Preparing to unpack .../05-x11-common_1%3a7.7+23ubuntu2_all.deb ... 530s Unpacking x11-common (1:7.7+23ubuntu2) ... 530s Selecting previously unselected package xfonts-encodings. 530s Preparing to unpack .../06-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 530s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 531s Selecting previously unselected package xfonts-utils. 531s Preparing to unpack .../07-xfonts-utils_1%3a7.7+6build2_arm64.deb ... 531s Unpacking xfonts-utils (1:7.7+6build2) ... 531s Selecting previously unselected package fonts-urw-base35. 531s Preparing to unpack .../08-fonts-urw-base35_20200910-8_all.deb ... 531s Unpacking fonts-urw-base35 (20200910-8) ... 532s Selecting previously unselected package fontconfig-config. 532s Preparing to unpack .../09-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 533s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 533s Selecting previously unselected package libfontconfig1:arm64. 533s Preparing to unpack .../10-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 533s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 533s Selecting previously unselected package libxrender1:arm64. 533s Preparing to unpack .../11-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 533s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 533s Selecting previously unselected package libxft2:arm64. 533s Preparing to unpack .../12-libxft2_2.3.6-1_arm64.deb ... 533s Unpacking libxft2:arm64 (2.3.6-1) ... 534s Selecting previously unselected package libxss1:arm64. 534s Preparing to unpack .../13-libxss1_1%3a1.2.3-1build2_arm64.deb ... 534s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 534s Selecting previously unselected package libtk8.6:arm64. 534s Preparing to unpack .../14-libtk8.6_8.6.14-1_arm64.deb ... 534s Unpacking libtk8.6:arm64 (8.6.14-1) ... 534s Selecting previously unselected package tk8.6-blt2.5. 534s Preparing to unpack .../15-tk8.6-blt2.5_2.5.3+dfsg-7_arm64.deb ... 534s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... 534s Selecting previously unselected package blt. 534s Preparing to unpack .../16-blt_2.5.3+dfsg-7_arm64.deb ... 534s Unpacking blt (2.5.3+dfsg-7) ... 534s Selecting previously unselected package fonts-dejavu-extra. 534s Preparing to unpack .../17-fonts-dejavu-extra_2.37-8_all.deb ... 534s Unpacking fonts-dejavu-extra (2.37-8) ... 535s Selecting previously unselected package fonts-lyx. 535s Preparing to unpack .../18-fonts-lyx_2.4.0~RC3-1_all.deb ... 535s Unpacking fonts-lyx (2.4.0~RC3-1) ... 535s Selecting previously unselected package libblas3:arm64. 535s Preparing to unpack .../19-libblas3_3.12.0-3_arm64.deb ... 535s Unpacking libblas3:arm64 (3.12.0-3) ... 535s Selecting previously unselected package libpixman-1-0:arm64. 535s Preparing to unpack .../20-libpixman-1-0_0.42.2-1_arm64.deb ... 535s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 535s Selecting previously unselected package libxcb-render0:arm64. 535s Preparing to unpack .../21-libxcb-render0_1.15-1_arm64.deb ... 535s Unpacking libxcb-render0:arm64 (1.15-1) ... 535s Selecting previously unselected package libxcb-shm0:arm64. 535s Preparing to unpack .../22-libxcb-shm0_1.15-1_arm64.deb ... 535s Unpacking libxcb-shm0:arm64 (1.15-1) ... 535s Selecting previously unselected package libcairo2:arm64. 535s Preparing to unpack .../23-libcairo2_1.18.0-1_arm64.deb ... 536s Unpacking libcairo2:arm64 (1.18.0-1) ... 536s Selecting previously unselected package libdeflate0:arm64. 536s Preparing to unpack .../24-libdeflate0_1.19-1_arm64.deb ... 536s Unpacking libdeflate0:arm64 (1.19-1) ... 536s Selecting previously unselected package libgfortran5:arm64. 536s Preparing to unpack .../25-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 536s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 536s Selecting previously unselected package libgomp1:arm64. 536s Preparing to unpack .../26-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 536s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 536s Selecting previously unselected package libgraphite2-3:arm64. 536s Preparing to unpack .../27-libgraphite2-3_1.3.14-2_arm64.deb ... 536s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 536s Selecting previously unselected package libharfbuzz0b:arm64. 537s Preparing to unpack .../28-libharfbuzz0b_8.3.0-2_arm64.deb ... 537s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 537s Selecting previously unselected package libhtscodecs2:arm64. 537s Preparing to unpack .../29-libhtscodecs2_1.6.0-1_arm64.deb ... 537s Unpacking libhtscodecs2:arm64 (1.6.0-1) ... 537s Selecting previously unselected package libhts3:arm64. 537s Preparing to unpack .../30-libhts3_1.18+ds-1_arm64.deb ... 537s Unpacking libhts3:arm64 (1.18+ds-1) ... 537s Selecting previously unselected package libimagequant0:arm64. 537s Preparing to unpack .../31-libimagequant0_2.18.0-1_arm64.deb ... 537s Unpacking libimagequant0:arm64 (2.18.0-1) ... 537s Selecting previously unselected package libjpeg-turbo8:arm64. 537s Preparing to unpack .../32-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 537s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 538s Selecting previously unselected package libjpeg8:arm64. 538s Preparing to unpack .../33-libjpeg8_8c-2ubuntu11_arm64.deb ... 538s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 538s Selecting previously unselected package libjs-jquery. 538s Preparing to unpack .../34-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 539s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 539s Selecting previously unselected package libjs-jquery-ui. 539s Preparing to unpack .../35-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 539s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 539s Selecting previously unselected package liblapack3:arm64. 539s Preparing to unpack .../36-liblapack3_3.12.0-3_arm64.deb ... 539s Unpacking liblapack3:arm64 (3.12.0-3) ... 539s Selecting previously unselected package liblbfgsb0:arm64. 539s Preparing to unpack .../37-liblbfgsb0_3.0+dfsg.4-1_arm64.deb ... 539s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1) ... 539s Selecting previously unselected package liblcms2-2:arm64. 539s Preparing to unpack .../38-liblcms2-2_2.14-2_arm64.deb ... 539s Unpacking liblcms2-2:arm64 (2.14-2) ... 539s Selecting previously unselected package liblerc4:arm64. 539s Preparing to unpack .../39-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 539s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 539s Selecting previously unselected package libparasail8:arm64. 539s Preparing to unpack .../40-libparasail8_2.6.2+dfsg-1_arm64.deb ... 539s Unpacking libparasail8:arm64 (2.6.2+dfsg-1) ... 540s Selecting previously unselected package libparasail-dev:arm64. 540s Preparing to unpack .../41-libparasail-dev_2.6.2+dfsg-1_arm64.deb ... 540s Unpacking libparasail-dev:arm64 (2.6.2+dfsg-1) ... 540s Selecting previously unselected package libqhull-r8.0:arm64. 540s Preparing to unpack .../42-libqhull-r8.0_2020.2-6_arm64.deb ... 540s Unpacking libqhull-r8.0:arm64 (2020.2-6) ... 540s Selecting previously unselected package libraqm0:arm64. 540s Preparing to unpack .../43-libraqm0_0.10.1-1_arm64.deb ... 540s Unpacking libraqm0:arm64 (0.10.1-1) ... 540s Selecting previously unselected package libsharpyuv0:arm64. 540s Preparing to unpack .../44-libsharpyuv0_1.3.2-0.4_arm64.deb ... 540s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 540s Selecting previously unselected package libjbig0:arm64. 540s Preparing to unpack .../45-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 540s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 540s Selecting previously unselected package libwebp7:arm64. 541s Preparing to unpack .../46-libwebp7_1.3.2-0.4_arm64.deb ... 541s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 541s Selecting previously unselected package libtiff6:arm64. 541s Preparing to unpack .../47-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 541s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 541s Selecting previously unselected package libwebpdemux2:arm64. 541s Preparing to unpack .../48-libwebpdemux2_1.3.2-0.4_arm64.deb ... 541s Unpacking libwebpdemux2:arm64 (1.3.2-0.4) ... 541s Selecting previously unselected package libwebpmux3:arm64. 541s Preparing to unpack .../49-libwebpmux3_1.3.2-0.4_arm64.deb ... 541s Unpacking libwebpmux3:arm64 (1.3.2-0.4) ... 541s Selecting previously unselected package libxslt1.1:arm64. 541s Preparing to unpack .../50-libxslt1.1_1.1.39-0exp1_arm64.deb ... 541s Unpacking libxslt1.1:arm64 (1.1.39-0exp1) ... 541s Selecting previously unselected package python-matplotlib-data. 541s Preparing to unpack .../51-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ... 541s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ... 542s Selecting previously unselected package python3-all. 542s Preparing to unpack .../52-python3-all_3.12.1-0ubuntu2_arm64.deb ... 542s Unpacking python3-all (3.12.1-0ubuntu2) ... 542s Selecting previously unselected package python3-appdirs. 543s Preparing to unpack .../53-python3-appdirs_1.4.4-4_all.deb ... 543s Unpacking python3-appdirs (1.4.4-4) ... 543s Selecting previously unselected package python3-numpy. 543s Preparing to unpack .../54-python3-numpy_1%3a1.24.2-2_arm64.deb ... 543s Unpacking python3-numpy (1:1.24.2-2) ... 545s Selecting previously unselected package python3-tk:arm64. 545s Preparing to unpack .../55-python3-tk_3.11.5-1_arm64.deb ... 545s Unpacking python3-tk:arm64 (3.11.5-1) ... 545s Selecting previously unselected package python3-pil.imagetk:arm64. 545s Preparing to unpack .../56-python3-pil.imagetk_10.2.0-1_arm64.deb ... 545s Unpacking python3-pil.imagetk:arm64 (10.2.0-1) ... 545s Selecting previously unselected package libopenjp2-7:arm64. 545s Preparing to unpack .../57-libopenjp2-7_2.5.0-2_arm64.deb ... 545s Unpacking libopenjp2-7:arm64 (2.5.0-2) ... 545s Selecting previously unselected package python3-pil:arm64. 545s Preparing to unpack .../58-python3-pil_10.2.0-1_arm64.deb ... 545s Unpacking python3-pil:arm64 (10.2.0-1) ... 545s Selecting previously unselected package python3-cairo. 545s Preparing to unpack .../59-python3-cairo_1.25.1-2_arm64.deb ... 545s Unpacking python3-cairo (1.25.1-2) ... 546s Selecting previously unselected package python3-freetype. 546s Preparing to unpack .../60-python3-freetype_2.4.0-1_all.deb ... 546s Unpacking python3-freetype (2.4.0-1) ... 546s Selecting previously unselected package python3-rlpycairo. 546s Preparing to unpack .../61-python3-rlpycairo_0.3.0-3_all.deb ... 546s Unpacking python3-rlpycairo (0.3.0-3) ... 546s Selecting previously unselected package python3-reportlab. 546s Preparing to unpack .../62-python3-reportlab_4.1.0-1_all.deb ... 546s Unpacking python3-reportlab (4.1.0-1) ... 547s Selecting previously unselected package xml-core. 547s Preparing to unpack .../63-xml-core_0.19_all.deb ... 547s Unpacking xml-core (0.19) ... 547s Selecting previously unselected package w3c-sgml-lib. 547s Preparing to unpack .../64-w3c-sgml-lib_1.3-3_all.deb ... 547s Unpacking w3c-sgml-lib (1.3-3) ... 548s Selecting previously unselected package python3-biopython. 548s Preparing to unpack .../65-python3-biopython_1.81+dfsg-3_arm64.deb ... 548s Unpacking python3-biopython (1.81+dfsg-3) ... 550s Selecting previously unselected package python3-brotli. 550s Preparing to unpack .../66-python3-brotli_1.1.0-2_arm64.deb ... 550s Unpacking python3-brotli (1.1.0-2) ... 550s Selecting previously unselected package python3-contourpy. 550s Preparing to unpack .../67-python3-contourpy_1.0.7-1build2_arm64.deb ... 550s Unpacking python3-contourpy (1.0.7-1build2) ... 550s Selecting previously unselected package python3-cycler. 551s Preparing to unpack .../68-python3-cycler_0.11.0-2_all.deb ... 551s Unpacking python3-cycler (0.11.0-2) ... 551s Selecting previously unselected package python3-dateutil. 551s Preparing to unpack .../69-python3-dateutil_2.8.2-3_all.deb ... 551s Unpacking python3-dateutil (2.8.2-3) ... 551s Selecting previously unselected package python3-decorator. 551s Preparing to unpack .../70-python3-decorator_5.1.1-5_all.deb ... 551s Unpacking python3-decorator (5.1.1-5) ... 551s Selecting previously unselected package python3-edlib:arm64. 551s Preparing to unpack .../71-python3-edlib_1.2.7-5_arm64.deb ... 551s Unpacking python3-edlib:arm64 (1.2.7-5) ... 552s Selecting previously unselected package python3-scipy. 552s Preparing to unpack .../72-python3-scipy_1.11.4-6_arm64.deb ... 552s Unpacking python3-scipy (1.11.4-6) ... 559s Selecting previously unselected package python3-ufolib2. 559s Preparing to unpack .../73-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 559s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 559s Selecting previously unselected package python3-mpmath. 560s Preparing to unpack .../74-python3-mpmath_1.2.1-3_all.deb ... 560s Unpacking python3-mpmath (1.2.1-3) ... 560s Selecting previously unselected package python3-sympy. 560s Preparing to unpack .../75-python3-sympy_1.12-7_all.deb ... 560s Unpacking python3-sympy (1.12-7) ... 563s Selecting previously unselected package python3-fs. 563s Preparing to unpack .../76-python3-fs_2.4.16-3_all.deb ... 563s Unpacking python3-fs (2.4.16-3) ... 563s Selecting previously unselected package python3-lxml:arm64. 563s Preparing to unpack .../77-python3-lxml_5.1.0-1_arm64.deb ... 563s Unpacking python3-lxml:arm64 (5.1.0-1) ... 564s Selecting previously unselected package python3-lz4. 564s Preparing to unpack .../78-python3-lz4_4.0.2+dfsg-1build2_arm64.deb ... 564s Unpacking python3-lz4 (4.0.2+dfsg-1build2) ... 564s Selecting previously 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598s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 598s Setting up python3-sympy (1.12-7) ... 630s Setting up liblapack3:arm64 (3.12.0-3) ... 630s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 630s Setting up libhts3:arm64 (1.18+ds-1) ... 630s Setting up python3-pysam (0.22.0+ds-1) ... 631s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 632s Setting up python3-pytest (7.4.4-1) ... 634s Setting up libwebpdemux2:arm64 (1.3.2-0.4) ... 634s Setting up xfonts-utils (1:7.7+6build2) ... 634s Setting up python3-fs (2.4.16-3) ... 635s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 635s Setting up libraqm0:arm64 (0.10.1-1) ... 635s Setting up python3-numpy (1:1.24.2-2) ... 645s Setting up python3-lxml:arm64 (5.1.0-1) ... 647s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 647s Setting up xml-core (0.19) ... 649s Setting up python3-contourpy 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(0.16.0+dfsg1-1) ... 703s Setting up python3-matplotlib (3.6.3-1ubuntu3) ... 710s Processing triggers for libc-bin (2.39-0ubuntu6) ... 710s Processing triggers for man-db (2.12.0-3) ... 714s Processing triggers for sgml-base (1.31) ... 714s Setting up w3c-sgml-lib (1.3-3) ... 899s Setting up python3-biopython (1.81+dfsg-3) ... 905s Setting up python3-pychopper (2.7.9-1) ... 906s Setting up autopkgtest-satdep (0) ... 921s (Reading database ... 86855 files and directories currently installed.) 921s Removing autopkgtest-satdep (0) ... 923s autopkgtest [17:35:35]: test run-unit-test: [----------------------- 925s ============================= test session starts ============================== 925s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 -- /usr/bin/python3.12 925s cachedir: .pytest_cache 925s rootdir: /tmp/autopkgtest.7Igcyq/build.GVA/src 925s configfile: pytest.ini 925s testpaths: pychopper 925s collecting ... collected 4 items 925s 925s pychopper/tests/test_detector.py::TestDetector::testPairAlign PASSED [ 25%] 925s pychopper/tests/test_detector.py::TestDetector::testScoreCutoff PASSED [ 50%] 948s pychopper/tests/test_regression_simple.py::TestIntegration::testIntegration FAILED [ 75%] 967s pychopper/tests/test_regression_simple.py::TestIntegration::testIntegration_umi FAILED [100%] 967s 967s =================================== FAILURES =================================== 967s _______________________ TestIntegration.testIntegration ________________________ 967s 967s self = 967s 967s def testIntegration(self): 967s """ Integration test. """ 967s base = path.dirname(__file__) 967s test_base = path.join(base, 'data') 967s 967s barcodes = path.join(test_base, 'barcodes.fas') 967s input_fasta = path.join(test_base, 'ref.fq.gz') 967s output_fasta = path.join(test_base, 'test_output.fq.gz') 967s expected_output = path.join(test_base, 'expected_output.fas') 967s 967s subprocess.call("{} {} {} {} {}".format('pychopper', "-Y 0 -B 3 -q 0.5 -m edlib -b", barcodes, input_fasta, output_fasta), shell=True) 967s retval = subprocess.call(['cmp', output_fasta, expected_output]) 967s > self.assertEqual(retval, 0) 967s E AssertionError: 1 != 0 967s 967s pychopper/tests/test_regression_simple.py:21: AssertionError 967s ----------------------------- Captured stderr call ----------------------------- 967s Using kit: /tmp/autopkgtest.7Igcyq/build.GVA/src/pychopper/tests/data/barcodes.fas 967s Configurations to consider: "+:SSP,-VNP|-:VNP,-SSP" 967s Processing the whole dataset using a batch size of 3: 967s 0%| | 0/1665 [00:00 967s sys.exit(load_entry_point('pychopper==2.7.9', 'console_scripts', 'pychopper')()) 967s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 967s File "/usr/lib/python3/dist-packages/pychopper/scripts/pychopper.py", line 494, in main 967s for read, (segments, hits, usable_len) in backend(batch, executor, 967s File "/usr/lib/python3/dist-packages/pychopper/chopper.py", line 150, in chopper_edlib 967s for i, hits in enumerate(batch_hits): 967s File "/usr/lib/python3/dist-packages/pychopper/edlib_backend.py", line 14, in find_locations 967s for res in pool.map(_find_locations_single, zip(batch, [(all_primers, max_ed)] * len(batch))): 967s File "/usr/lib/python3.12/concurrent/futures/process.py", line 642, in _chain_from_iterable_of_lists 967s for element in iterable: 967s File "/usr/lib/python3.12/concurrent/futures/_base.py", line 619, in result_iterator 967s yield _result_or_cancel(fs.pop()) 967s ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 967s File "/usr/lib/python3.12/concurrent/futures/_base.py", line 317, in _result_or_cancel 967s return fut.result(timeout) 967s ^^^^^^^^^^^^^^^^^^^ 967s File "/usr/lib/python3.12/concurrent/futures/_base.py", line 456, in result 967s return self.__get_result() 967s ^^^^^^^^^^^^^^^^^^^ 967s File "/usr/lib/python3.12/concurrent/futures/_base.py", line 401, in __get_result 967s raise self._exception 967s AttributeError: 'Result' object has no traceback 967s 0%| | 0/1665 [00:14 967s 967s def testIntegration_umi(self): 967s """ Integration test. """ 967s base = path.dirname(__file__) 967s test_base = path.join(base, 'data') 967s 967s input_fasta = path.join(test_base, 'PCS111_umi_test_reads.fastq.gz') 967s output_fasta = path.join(test_base, 'test_output_umi.fq.gz') 967s expected_output = path.join(test_base, 'PCS111_umi_test_reads_expected.fastq') 967s 967s subprocess.call("{} {} {} {}".format('pychopper', "-U -m edlib -k PCS111", input_fasta, output_fasta), shell=True) 967s retval = subprocess.call(['cmp', output_fasta, expected_output]) 967s > self.assertEqual(retval, 0) 967s E AssertionError: 1 != 0 967s 967s pychopper/tests/test_regression_simple.py:35: AssertionError 967s ----------------------------- Captured stderr call ----------------------------- 967s Using kit: /usr/lib/python3/dist-packages/pychopper/primer_data/PCS111_primers.fas 967s Configurations to consider: "+:SSP,-VNP|-:VNP,-SSP" 967s Counting fastq records in input file: /tmp/autopkgtest.7Igcyq/build.GVA/src/pychopper/tests/data/PCS111_umi_test_reads.fastq.gz 967s Total fastq records in input file: 4 967s Tuning the cutoff parameter (q) on 4 sampled reads (100.0%) passing quality filters (Q >= 7.0). 967s Optimizing over 30 cutoff values. 967s 0%| | 0/30 [00:00 967s sys.exit(load_entry_point('pychopper==2.7.9', 'console_scripts', 'pychopper')()) 967s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 967s File "/usr/lib/python3/dist-packages/pychopper/scripts/pychopper.py", line 452, in main 967s for read, (segments, hits, usable_len) \ 967s File "/usr/lib/python3/dist-packages/pychopper/chopper.py", line 150, in chopper_edlib 967s for i, hits in enumerate(batch_hits): 967s File "/usr/lib/python3/dist-packages/pychopper/edlib_backend.py", line 14, in find_locations 967s for res in pool.map(_find_locations_single, zip(batch, [(all_primers, max_ed)] * len(batch))): 967s File "/usr/lib/python3.12/concurrent/futures/process.py", line 642, in _chain_from_iterable_of_lists 967s for element in iterable: 967s File "/usr/lib/python3.12/concurrent/futures/_base.py", line 619, in result_iterator 967s yield _result_or_cancel(fs.pop()) 967s ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 967s File "/usr/lib/python3.12/concurrent/futures/_base.py", line 317, in _result_or_cancel 967s return fut.result(timeout) 967s ^^^^^^^^^^^^^^^^^^^ 967s File "/usr/lib/python3.12/concurrent/futures/_base.py", line 456, in result 967s return self.__get_result() 967s ^^^^^^^^^^^^^^^^^^^ 967s File "/usr/lib/python3.12/concurrent/futures/_base.py", line 401, in __get_result 967s raise self._exception 967s AttributeError: 'Result' object has no traceback 967s cmp: EOF on /tmp/autopkgtest.7Igcyq/build.GVA/src/pychopper/tests/data/test_output_umi.fq.gz which is empty 967s =========================== short test summary info ============================ 967s FAILED pychopper/tests/test_regression_simple.py::TestIntegration::testIntegration 967s FAILED pychopper/tests/test_regression_simple.py::TestIntegration::testIntegration_umi 967s ========================= 2 failed, 2 passed in 42.24s ========================= 967s autopkgtest [17:36:19]: test run-unit-test: -----------------------] 968s autopkgtest [17:36:20]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 968s run-unit-test FAIL non-zero exit status 1 969s autopkgtest [17:36:21]: test autodep8-python3: preparing testbed 2192s autopkgtest [17:56:44]: testbed dpkg architecture: arm64 2195s autopkgtest [17:56:47]: testbed apt version: 2.7.12 2195s autopkgtest [17:56:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup 2206s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 2215s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 2216s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB] 2217s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [57.3 kB] 2218s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3986 kB] 2229s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [710 kB] 2231s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 2231s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.7 kB] 2231s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 2232s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4364 kB] 2243s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 2243s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [70.1 kB] 2244s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 2418s Fetched 9851 kB in 1min 31s (108 kB/s) 2427s Reading package lists... 2495s Reading package lists... 2502s Building dependency tree... 2502s Reading state information... 2511s Calculating upgrade... 2519s The following packages will be REMOVED: 2519s libssl3 2519s The following NEW packages will be installed: 2519s libssl3t64 2519s The following packages have been kept back: 2519s curl 2519s The following packages will be upgraded: 2519s openssl 2520s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 2520s Need to get 2777 kB of archives. 2520s After this operation, 139 kB of additional disk space will be used. 2520s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu2 [985 kB] 2524s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu2 [1793 kB] 2542s Fetched 2777 kB in 7s (402 kB/s) 2550s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75911 files and directories currently installed.) 2550s Preparing to unpack .../openssl_3.0.13-0ubuntu2_arm64.deb ... 2550s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 2561s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 2561s wget depends on libssl3 (>= 3.0.0). 2561s u-boot-tools depends on libssl3 (>= 3.0.0). 2561s tnftp depends on libssl3 (>= 3.0.0). 2561s tcpdump depends on libssl3 (>= 3.0.0). 2561s systemd-resolved depends on libssl3 (>= 3.0.0). 2561s systemd depends on libssl3 (>= 3.0.0). 2561s sudo depends on libssl3 (>= 3.0.0). 2561s sbsigntool depends on libssl3 (>= 3.0.0). 2561s rsync depends on libssl3 (>= 3.0.0). 2561s python3-cryptography depends on libssl3 (>= 3.0.0). 2561s openssh-server depends on libssl3 (>= 3.0.10). 2561s openssh-client depends on libssl3 (>= 3.0.10). 2561s mtd-utils depends on libssl3 (>= 3.0.0). 2561s mokutil depends on libssl3 (>= 3.0.0). 2561s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 2561s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 2561s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 2561s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 2561s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 2561s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 2561s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 2561s libnvme1 depends on libssl3 (>= 3.0.0). 2561s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 2561s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 2561s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 2561s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 2561s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 2561s kmod depends on libssl3 (>= 3.0.0). 2561s dhcpcd-base depends on libssl3 (>= 3.0.0). 2561s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 2561s 2563s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75911 files and directories currently installed.) 2566s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 2566s Selecting previously unselected package libssl3t64:arm64. 2567s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75900 files and directories currently installed.) 2568s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_arm64.deb ... 2568s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu2) ... 2571s Setting up libssl3t64:arm64 (3.0.13-0ubuntu2) ... 2571s Setting up openssl (3.0.13-0ubuntu2) ... 2571s Processing triggers for man-db (2.12.0-3) ... 2598s Processing triggers for libc-bin (2.39-0ubuntu6) ... 2612s Reading package lists... 2619s Building dependency tree... 2619s Reading state information... 2637s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 2663s sh: Attempting to set up Debian/Ubuntu apt sources automatically 2664s sh: Distribution appears to be Ubuntu 2720s Reading package lists... 2722s Building dependency tree... 2722s Reading state information... 2743s eatmydata is already the newest version (131-1). 2743s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2743s Reading package lists... 2743s Building dependency tree... 2743s Reading state information... 2751s dbus is already the newest version (1.14.10-4ubuntu1). 2751s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2753s Reading package lists... 2757s Building dependency tree... 2757s Reading state information... 2771s rng-tools-debian is already the newest version (2.4). 2771s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2772s Reading package lists... 2777s Building dependency tree... 2777s Reading state information... 2787s The following packages will be REMOVED: 2787s cloud-init* python3-configobj* python3-debconf* 2797s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 2797s After this operation, 3256 kB disk space will be freed. 2797s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75913 files and directories currently installed.) 2797s Removing cloud-init (24.1.2-0ubuntu1) ... 2822s Removing python3-configobj (5.0.8-3) ... 2825s Removing python3-debconf (1.5.86) ... 2835s Processing triggers for man-db (2.12.0-3) ... 2837s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75524 files and directories currently installed.) 2837s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 2875s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 2875s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 2875s invoke-rc.d: policy-rc.d denied execution of try-restart. 2885s Reading package lists... 2886s Building dependency tree... 2886s Reading state information... 2902s linux-generic is already the newest version (6.8.0-11.11+1). 2902s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2903s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 2903s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 2903s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 3025s Reading package lists... 3025s Reading package lists... 3031s Building dependency tree... 3031s Reading state information... 3053s Calculating upgrade... 3053s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 3053s Reading package lists... 3053s Building dependency tree... 3053s Reading state information... 3059s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 3061s autopkgtest [18:11:13]: rebooting testbed after setup commands that affected boot 3304s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 3337s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 3370s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 3403s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 3436s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 3469s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 3502s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 3535s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 3657s Reading package lists... 3662s Building dependency tree... 3662s Reading state information... 3669s Starting pkgProblemResolver with broken count: 0 3672s Starting 2 pkgProblemResolver with broken count: 0 3672s Done 3685s The following additional packages will be installed: 3685s blt fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono 3685s fonts-lyx fonts-urw-base35 libblas3 libcairo2 libdeflate0 libfontconfig1 3685s libfontenc1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhts3 3685s libhtscodecs2 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 3685s libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libopenjp2-7 3685s libparasail-dev libparasail8 libpixman-1-0 libqhull-r8.0 libraqm0 3685s libsharpyuv0 libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 3685s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 3685s python-matplotlib-data python3-all python3-appdirs python3-biopython 3685s python3-brotli python3-cairo python3-contourpy python3-cycler 3685s python3-dateutil python3-decorator python3-fonttools python3-freetype 3685s python3-fs python3-iniconfig python3-kiwisolver python3-lxml python3-lz4 3685s python3-matplotlib python3-mpmath python3-numpy python3-packaging 3685s python3-pandas python3-pandas-lib python3-parasail python3-pil 3685s python3-pil.imagetk python3-pluggy python3-pychopper python3-pysam 3685s python3-pytest python3-reportlab python3-rlpycairo python3-scipy 3685s python3-sympy python3-tk python3-tqdm python3-ufolib2 python3-wheel 3685s sgml-base tk8.6-blt2.5 unicode-data w3c-sgml-lib x11-common xfonts-encodings 3685s xfonts-utils xml-core 3686s Suggested packages: 3686s blt-demo fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 3686s libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 bwa clustalo clustalw 3686s dialign dssp emboss fasttree mafft muscle3 phylip phyml prank probcons 3686s python3-mysqldb python3-mmtf python3-rdflib python3-psycopg2 raxml samtools 3686s t-coffee wise python-cycler-doc python-lxml-doc cm-super-minimal dvipng 3686s ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 3686s librsvg2-common python3-cairocffi python3-gi-cairo python3-gobject 3686s python3-pyqt5 python3-sip python3-tornado texlive-extra-utils 3686s texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc gfortran python3-dev 3686s python-pandas-doc python3-statsmodels python-pil-doc pdf-viewer 3686s python3-egenix-mxtexttools python-reportlab-doc rl-accel rl-renderpm 3686s python-scipy-doc texlive-fonts-extra python-sympy-doc tix python3-tk-dbg 3686s sgml-base-doc debhelper 3686s Recommended packages: 3686s javascript-common python-biopython-doc ncbi-blast+ python3-bs4 3686s python3-cssselect python3-html5lib python3-bottleneck python3-numexpr 3686s python3-odf python3-openpyxl python3-tables python3-olefile g++ 3686s | c++-compiler isympy-common 3688s The following NEW packages will be installed: 3688s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core 3688s fonts-dejavu-extra fonts-dejavu-mono fonts-lyx fonts-urw-base35 libblas3 3688s libcairo2 libdeflate0 libfontconfig1 libfontenc1 libgfortran5 libgomp1 3688s libgraphite2-3 libharfbuzz0b libhts3 libhtscodecs2 libimagequant0 libjbig0 3688s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 3688s liblcms2-2 liblerc4 libopenjp2-7 libparasail-dev libparasail8 libpixman-1-0 3688s libqhull-r8.0 libraqm0 libsharpyuv0 libtcl8.6 libtiff6 libtk8.6 libwebp7 3688s libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 libxft2 libxrender1 3688s libxslt1.1 libxss1 python-matplotlib-data python3-all python3-appdirs 3688s python3-biopython python3-brotli python3-cairo python3-contourpy 3688s python3-cycler python3-dateutil python3-decorator python3-fonttools 3688s python3-freetype python3-fs python3-iniconfig python3-kiwisolver 3688s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-numpy 3688s python3-packaging python3-pandas python3-pandas-lib python3-parasail 3688s python3-pil python3-pil.imagetk python3-pluggy python3-pychopper 3688s python3-pysam python3-pytest python3-reportlab python3-rlpycairo 3688s python3-scipy python3-sympy python3-tk python3-tqdm python3-ufolib2 3689s python3-wheel sgml-base tk8.6-blt2.5 unicode-data w3c-sgml-lib x11-common 3689s xfonts-encodings xfonts-utils xml-core 3690s 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. 3690s Need to get 95.9 MB/95.9 MB of archives. 3690s After this operation, 453 MB of additional disk space will be used. 3690s Get:1 /tmp/autopkgtest.7Igcyq/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [716 B] 3690s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 sgml-base all 1.31 [11.4 kB] 3691s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 3694s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 3695s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 3696s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libfontenc1 arm64 1:1.1.8-1 [13.9 kB] 3696s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 3696s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 3697s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-utils arm64 1:7.7+6build2 [93.6 kB] 3697s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-urw-base35 all 20200910-8 [11.0 MB] 3705s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 3705s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 3705s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 3705s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 3706s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 3706s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.14-1 [767 kB] 3707s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7 [618 kB] 3707s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 blt arm64 2.5.3+dfsg-7 [4826 B] 3707s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-extra all 2.37-8 [1947 kB] 3709s Get:20 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lyx all 2.4.0~RC3-1 [170 kB] 3709s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 3710s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 3710s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 3710s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 3710s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 3710s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 3710s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 3711s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 3711s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 3712s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 3712s Get:31 http://ftpmaster.internal/ubuntu noble/universe arm64 libhtscodecs2 arm64 1.6.0-1 [78.1 kB] 3712s Get:32 http://ftpmaster.internal/ubuntu noble/universe arm64 libhts3 arm64 1.18+ds-1 [422 kB] 3713s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libimagequant0 arm64 2.18.0-1 [37.0 kB] 3713s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 3713s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 3713s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 3713s Get:37 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 3713s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 3715s Get:39 http://ftpmaster.internal/ubuntu noble/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1 [27.7 kB] 3715s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 liblcms2-2 arm64 2.14-2 [159 kB] 3715s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 3715s Get:42 http://ftpmaster.internal/ubuntu noble/universe arm64 libparasail8 arm64 2.6.2+dfsg-1 [511 kB] 3716s Get:43 http://ftpmaster.internal/ubuntu noble/universe arm64 libparasail-dev arm64 2.6.2+dfsg-1 [185 kB] 3716s Get:44 http://ftpmaster.internal/ubuntu noble/universe arm64 libqhull-r8.0 arm64 2020.2-6 [188 kB] 3716s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libraqm0 arm64 0.10.1-1 [14.4 kB] 3716s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 3716s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 3716s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 3716s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 3716s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpdemux2 arm64 1.3.2-0.4 [12.3 kB] 3716s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpmux3 arm64 1.3.2-0.4 [25.0 kB] 3717s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libxslt1.1 arm64 1.1.39-0exp1 [166 kB] 3717s Get:53 http://ftpmaster.internal/ubuntu noble/universe arm64 python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] 3720s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 python3-all arm64 3.12.1-0ubuntu2 [906 B] 3720s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB] 3720s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 python3-numpy arm64 1:1.24.2-2 [4525 kB] 3726s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 python3-tk arm64 3.11.5-1 [112 kB] 3726s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pil.imagetk arm64 10.2.0-1 [9708 B] 3726s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libopenjp2-7 arm64 2.5.0-2 [170 kB] 3726s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 python3-pil arm64 10.2.0-1 [477 kB] 3727s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 python3-cairo arm64 1.25.1-2 [153 kB] 3727s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-freetype all 2.4.0-1 [83.1 kB] 3727s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-rlpycairo all 0.3.0-3 [9130 B] 3727s Get:64 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-reportlab all 4.1.0-1 [683 kB] 3728s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 xml-core all 0.19 [20.3 kB] 3729s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 w3c-sgml-lib all 1.3-3 [280 kB] 3729s Get:67 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-biopython arm64 1.81+dfsg-3 [1664 kB] 3731s Get:68 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-brotli arm64 1.1.0-2 [345 kB] 3731s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-contourpy arm64 1.0.7-1build2 [244 kB] 3731s Get:70 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-cycler all 0.11.0-2 [8202 B] 3731s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 python3-dateutil all 2.8.2-3 [79.2 kB] 3731s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 3731s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-scipy arm64 1.11.4-6 [18.6 MB] 3752s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 3752s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-mpmath all 1.2.1-3 [421 kB] 3753s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-sympy all 1.12-7 [3966 kB] 3757s Get:77 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fs all 2.4.16-3 [91.1 kB] 3757s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 python3-lxml arm64 5.1.0-1 [2042 kB] 3759s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build2 [28.4 kB] 3759s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 unicode-data all 15.1.0-1 [8878 kB] 3767s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fonttools arm64 4.46.0-1 [1625 kB] 3769s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 3770s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-kiwisolver arm64 1.4.4-2 [48.5 kB] 3770s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 python3-packaging all 23.2-1 [40.6 kB] 3770s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-matplotlib arm64 3.6.3-1ubuntu3 [7291 kB] 3778s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pandas-lib arm64 2.1.4+dfsg-4ubuntu2 [7669 kB] 3786s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pandas all 2.1.4+dfsg-4ubuntu2 [3042 kB] 3788s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-wheel all 0.42.0-1 [53.1 kB] 3788s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-parasail all 1.3.3-1 [40.5 kB] 3788s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pluggy all 1.4.0-1 [20.4 kB] 3788s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pysam arm64 0.22.0+ds-1 [4399 kB] 3791s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pytest all 7.4.4-1 [305 kB] 3791s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-tqdm all 4.64.1-2 [95.2 kB] 3791s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pychopper all 2.7.9-1 [150 kB] 3824s Fetched 95.9 MB in 1min 42s (940 kB/s) 3826s Selecting previously unselected package sgml-base. 3833s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75469 files and directories currently installed.) 3833s Preparing to unpack .../00-sgml-base_1.31_all.deb ... 3833s Unpacking sgml-base (1.31) ... 3834s Selecting previously unselected package libtcl8.6:arm64. 3835s Preparing to unpack .../01-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 3835s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 3841s Selecting previously unselected package fonts-dejavu-mono. 3841s Preparing to unpack .../02-fonts-dejavu-mono_2.37-8_all.deb ... 3841s Unpacking fonts-dejavu-mono (2.37-8) ... 3844s Selecting previously unselected package fonts-dejavu-core. 3845s Preparing to unpack .../03-fonts-dejavu-core_2.37-8_all.deb ... 3846s Unpacking fonts-dejavu-core (2.37-8) ... 3849s Selecting previously unselected package libfontenc1:arm64. 3849s Preparing to unpack .../04-libfontenc1_1%3a1.1.8-1_arm64.deb ... 3849s Unpacking libfontenc1:arm64 (1:1.1.8-1) ... 3851s Selecting previously unselected package x11-common. 3852s Preparing to unpack .../05-x11-common_1%3a7.7+23ubuntu2_all.deb ... 3852s Unpacking x11-common (1:7.7+23ubuntu2) ... 3854s Selecting previously unselected package xfonts-encodings. 3855s Preparing to unpack .../06-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 3855s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 3857s Selecting previously unselected package xfonts-utils. 3858s Preparing to unpack .../07-xfonts-utils_1%3a7.7+6build2_arm64.deb ... 3858s Unpacking xfonts-utils (1:7.7+6build2) ... 3860s Selecting previously unselected package fonts-urw-base35. 3861s Preparing to unpack .../08-fonts-urw-base35_20200910-8_all.deb ... 3870s Unpacking fonts-urw-base35 (20200910-8) ... 3901s Selecting previously unselected package fontconfig-config. 3902s Preparing to unpack .../09-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 3923s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 3927s Selecting previously unselected package libfontconfig1:arm64. 3928s Preparing to unpack .../10-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 3928s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 3931s Selecting previously unselected package libxrender1:arm64. 3931s Preparing to unpack .../11-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 3931s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 3933s Selecting previously unselected package libxft2:arm64. 3933s Preparing to unpack .../12-libxft2_2.3.6-1_arm64.deb ... 3934s Unpacking libxft2:arm64 (2.3.6-1) ... 3935s Selecting previously unselected package libxss1:arm64. 3935s Preparing to unpack .../13-libxss1_1%3a1.2.3-1build2_arm64.deb ... 3936s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 3936s Selecting previously unselected package libtk8.6:arm64. 3937s Preparing to unpack .../14-libtk8.6_8.6.14-1_arm64.deb ... 3937s Unpacking libtk8.6:arm64 (8.6.14-1) ... 3941s Selecting previously unselected package tk8.6-blt2.5. 3941s Preparing to unpack .../15-tk8.6-blt2.5_2.5.3+dfsg-7_arm64.deb ... 3941s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... 3943s Selecting previously unselected package blt. 3943s Preparing to unpack .../16-blt_2.5.3+dfsg-7_arm64.deb ... 3943s Unpacking blt (2.5.3+dfsg-7) ... 3944s Selecting previously unselected package fonts-dejavu-extra. 3944s Preparing to unpack .../17-fonts-dejavu-extra_2.37-8_all.deb ... 3944s Unpacking fonts-dejavu-extra (2.37-8) ... 3947s Selecting previously unselected package fonts-lyx. 3947s Preparing to unpack .../18-fonts-lyx_2.4.0~RC3-1_all.deb ... 3947s Unpacking fonts-lyx (2.4.0~RC3-1) ... 3948s Selecting previously unselected package libblas3:arm64. 3949s Preparing to unpack .../19-libblas3_3.12.0-3_arm64.deb ... 3949s Unpacking libblas3:arm64 (3.12.0-3) ... 3950s Selecting previously unselected package libpixman-1-0:arm64. 3950s Preparing to unpack .../20-libpixman-1-0_0.42.2-1_arm64.deb ... 3950s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 3950s Selecting previously unselected package libxcb-render0:arm64. 3950s Preparing to unpack .../21-libxcb-render0_1.15-1_arm64.deb ... 3950s Unpacking libxcb-render0:arm64 (1.15-1) ... 3952s Selecting previously unselected package libxcb-shm0:arm64. 3952s Preparing to unpack .../22-libxcb-shm0_1.15-1_arm64.deb ... 3952s Unpacking libxcb-shm0:arm64 (1.15-1) ... 3953s Selecting previously unselected package libcairo2:arm64. 3953s Preparing to unpack .../23-libcairo2_1.18.0-1_arm64.deb ... 3953s Unpacking libcairo2:arm64 (1.18.0-1) ... 3955s Selecting previously unselected package libdeflate0:arm64. 3956s Preparing to unpack .../24-libdeflate0_1.19-1_arm64.deb ... 3956s Unpacking libdeflate0:arm64 (1.19-1) ... 3957s Selecting previously unselected package libgfortran5:arm64. 3958s Preparing to unpack .../25-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 3958s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 3959s Selecting previously unselected package libgomp1:arm64. 3959s Preparing to unpack .../26-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 3959s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 3960s Selecting previously unselected package libgraphite2-3:arm64. 3961s Preparing to unpack .../27-libgraphite2-3_1.3.14-2_arm64.deb ... 3961s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 3962s Selecting previously unselected package libharfbuzz0b:arm64. 3962s Preparing to unpack .../28-libharfbuzz0b_8.3.0-2_arm64.deb ... 3962s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 3964s Selecting previously unselected package libhtscodecs2:arm64. 3964s Preparing to unpack .../29-libhtscodecs2_1.6.0-1_arm64.deb ... 3964s Unpacking libhtscodecs2:arm64 (1.6.0-1) ... 3966s Selecting previously unselected package libhts3:arm64. 3966s Preparing to unpack .../30-libhts3_1.18+ds-1_arm64.deb ... 3966s Unpacking libhts3:arm64 (1.18+ds-1) ... 3967s Selecting previously unselected package libimagequant0:arm64. 3968s Preparing to unpack .../31-libimagequant0_2.18.0-1_arm64.deb ... 3968s Unpacking libimagequant0:arm64 (2.18.0-1) ... 3969s Selecting previously unselected package libjpeg-turbo8:arm64. 3969s Preparing to unpack .../32-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 3969s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 3971s Selecting previously unselected package libjpeg8:arm64. 3971s Preparing to unpack .../33-libjpeg8_8c-2ubuntu11_arm64.deb ... 3971s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 3972s Selecting previously unselected package libjs-jquery. 3972s Preparing to unpack .../34-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 3973s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 3974s Selecting previously unselected package libjs-jquery-ui. 3974s Preparing to unpack .../35-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 3974s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 3981s Selecting previously unselected package liblapack3:arm64. 3981s Preparing to unpack .../36-liblapack3_3.12.0-3_arm64.deb ... 3982s Unpacking liblapack3:arm64 (3.12.0-3) ... 3985s Selecting previously unselected package liblbfgsb0:arm64. 3985s Preparing to unpack .../37-liblbfgsb0_3.0+dfsg.4-1_arm64.deb ... 3985s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1) ... 3986s Selecting previously unselected package liblcms2-2:arm64. 3986s Preparing to unpack .../38-liblcms2-2_2.14-2_arm64.deb ... 3986s Unpacking liblcms2-2:arm64 (2.14-2) ... 3987s Selecting previously unselected package liblerc4:arm64. 3988s Preparing to unpack .../39-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 3988s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 3989s Selecting previously unselected package libparasail8:arm64. 3989s Preparing to unpack .../40-libparasail8_2.6.2+dfsg-1_arm64.deb ... 3989s Unpacking libparasail8:arm64 (2.6.2+dfsg-1) ... 3992s Selecting previously unselected package libparasail-dev:arm64. 3993s Preparing to unpack .../41-libparasail-dev_2.6.2+dfsg-1_arm64.deb ... 3993s Unpacking libparasail-dev:arm64 (2.6.2+dfsg-1) ... 3998s Selecting previously unselected package libqhull-r8.0:arm64. 3998s Preparing to unpack .../42-libqhull-r8.0_2020.2-6_arm64.deb ... 3998s Unpacking libqhull-r8.0:arm64 (2020.2-6) ... 4001s Selecting previously unselected package libraqm0:arm64. 4001s Preparing to unpack .../43-libraqm0_0.10.1-1_arm64.deb ... 4001s Unpacking libraqm0:arm64 (0.10.1-1) ... 4004s Selecting previously unselected package libsharpyuv0:arm64. 4004s Preparing to unpack .../44-libsharpyuv0_1.3.2-0.4_arm64.deb ... 4004s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 4005s Selecting previously unselected package libjbig0:arm64. 4006s Preparing to unpack .../45-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 4006s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 4006s Selecting previously unselected package libwebp7:arm64. 4006s Preparing to unpack .../46-libwebp7_1.3.2-0.4_arm64.deb ... 4006s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 4008s Selecting previously unselected package libtiff6:arm64. 4008s Preparing to unpack .../47-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 4008s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 4010s Selecting previously unselected package libwebpdemux2:arm64. 4011s Preparing to unpack .../48-libwebpdemux2_1.3.2-0.4_arm64.deb ... 4011s Unpacking libwebpdemux2:arm64 (1.3.2-0.4) ... 4012s Selecting previously unselected package libwebpmux3:arm64. 4013s Preparing to unpack .../49-libwebpmux3_1.3.2-0.4_arm64.deb ... 4013s Unpacking libwebpmux3:arm64 (1.3.2-0.4) ... 4014s Selecting previously unselected package libxslt1.1:arm64. 4014s Preparing to unpack .../50-libxslt1.1_1.1.39-0exp1_arm64.deb ... 4014s Unpacking libxslt1.1:arm64 (1.1.39-0exp1) ... 4016s Selecting previously unselected package python-matplotlib-data. 4017s Preparing to unpack .../51-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ... 4017s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ... 4025s Selecting previously unselected package python3-all. 4026s Preparing to unpack .../52-python3-all_3.12.1-0ubuntu2_arm64.deb ... 4026s Unpacking python3-all (3.12.1-0ubuntu2) ... 4027s Selecting previously unselected package python3-appdirs. 4029s Preparing to unpack .../53-python3-appdirs_1.4.4-4_all.deb ... 4029s Unpacking python3-appdirs (1.4.4-4) ... 4031s Selecting previously unselected package python3-numpy. 4031s Preparing to unpack .../54-python3-numpy_1%3a1.24.2-2_arm64.deb ... 4031s Unpacking python3-numpy (1:1.24.2-2) ... 4054s Selecting previously unselected package python3-tk:arm64. 4054s Preparing to unpack .../55-python3-tk_3.11.5-1_arm64.deb ... 4054s Unpacking python3-tk:arm64 (3.11.5-1) ... 4056s Selecting previously unselected package python3-pil.imagetk:arm64. 4057s Preparing to unpack .../56-python3-pil.imagetk_10.2.0-1_arm64.deb ... 4057s Unpacking python3-pil.imagetk:arm64 (10.2.0-1) ... 4058s Selecting previously unselected package libopenjp2-7:arm64. 4059s Preparing to unpack .../57-libopenjp2-7_2.5.0-2_arm64.deb ... 4059s Unpacking libopenjp2-7:arm64 (2.5.0-2) ... 4061s Selecting previously unselected package python3-pil:arm64. 4062s Preparing to unpack .../58-python3-pil_10.2.0-1_arm64.deb ... 4062s Unpacking python3-pil:arm64 (10.2.0-1) ... 4066s Selecting previously unselected package python3-cairo. 4067s Preparing to unpack .../59-python3-cairo_1.25.1-2_arm64.deb ... 4067s Unpacking python3-cairo (1.25.1-2) ... 4071s Selecting previously unselected package python3-freetype. 4072s Preparing to unpack .../60-python3-freetype_2.4.0-1_all.deb ... 4072s Unpacking python3-freetype (2.4.0-1) ... 4073s Selecting previously unselected package python3-rlpycairo. 4074s Preparing to unpack .../61-python3-rlpycairo_0.3.0-3_all.deb ... 4074s Unpacking python3-rlpycairo (0.3.0-3) ... 4074s Selecting previously unselected package python3-reportlab. 4074s Preparing to unpack .../62-python3-reportlab_4.1.0-1_all.deb ... 4075s Unpacking python3-reportlab (4.1.0-1) ... 4082s Selecting previously unselected package xml-core. 4083s Preparing to unpack .../63-xml-core_0.19_all.deb ... 4083s Unpacking xml-core (0.19) ... 4086s Selecting previously unselected package w3c-sgml-lib. 4086s Preparing to unpack .../64-w3c-sgml-lib_1.3-3_all.deb ... 4086s Unpacking w3c-sgml-lib (1.3-3) ... 4092s Selecting previously unselected package python3-biopython. 4092s Preparing to unpack .../65-python3-biopython_1.81+dfsg-3_arm64.deb ... 4092s Unpacking python3-biopython (1.81+dfsg-3) ... 4110s Selecting previously unselected package python3-brotli. 4111s Preparing to unpack .../66-python3-brotli_1.1.0-2_arm64.deb ... 4111s Unpacking python3-brotli (1.1.0-2) ... 4113s Selecting previously unselected package python3-contourpy. 4113s Preparing to unpack .../67-python3-contourpy_1.0.7-1build2_arm64.deb ... 4113s Unpacking python3-contourpy (1.0.7-1build2) ... 4116s Selecting previously unselected package python3-cycler. 4116s Preparing to unpack .../68-python3-cycler_0.11.0-2_all.deb ... 4116s Unpacking python3-cycler (0.11.0-2) ... 4117s Selecting previously unselected package python3-dateutil. 4118s Preparing to unpack .../69-python3-dateutil_2.8.2-3_all.deb ... 4118s Unpacking python3-dateutil (2.8.2-3) ... 4120s Selecting previously unselected package python3-decorator. 4120s Preparing to unpack .../70-python3-decorator_5.1.1-5_all.deb ... 4120s Unpacking python3-decorator (5.1.1-5) ... 4121s Selecting previously unselected package python3-scipy. 4121s Preparing to unpack .../71-python3-scipy_1.11.4-6_arm64.deb ... 4121s Unpacking python3-scipy (1.11.4-6) ... 4183s Selecting previously unselected package python3-ufolib2. 4184s Preparing to unpack .../72-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 4184s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 4186s Selecting previously unselected package python3-mpmath. 4186s Preparing to unpack .../73-python3-mpmath_1.2.1-3_all.deb ... 4186s Unpacking python3-mpmath (1.2.1-3) ... 4190s Selecting previously unselected package python3-sympy. 4191s Preparing to unpack .../74-python3-sympy_1.12-7_all.deb ... 4191s Unpacking python3-sympy (1.12-7) ... 4221s Selecting previously unselected package python3-fs. 4222s Preparing to unpack .../75-python3-fs_2.4.16-3_all.deb ... 4223s Unpacking python3-fs (2.4.16-3) ... 4224s Selecting previously unselected package python3-lxml:arm64. 4225s Preparing to unpack .../76-python3-lxml_5.1.0-1_arm64.deb ... 4225s Unpacking python3-lxml:arm64 (5.1.0-1) ... 4234s Selecting previously unselected package python3-lz4. 4234s Preparing to unpack .../77-python3-lz4_4.0.2+dfsg-1build2_arm64.deb ... 4235s Unpacking python3-lz4 (4.0.2+dfsg-1build2) ... 4238s Selecting previously unselected package unicode-data. 4238s Preparing to unpack .../78-unicode-data_15.1.0-1_all.deb ... 4238s Unpacking unicode-data (15.1.0-1) ... 4253s Selecting previously unselected package python3-fonttools. 4254s Preparing to unpack .../79-python3-fonttools_4.46.0-1_arm64.deb ... 4254s Unpacking python3-fonttools (4.46.0-1) ... 4264s Selecting previously unselected package python3-iniconfig. 4264s Preparing to unpack .../80-python3-iniconfig_1.1.1-2_all.deb ... 4264s Unpacking python3-iniconfig (1.1.1-2) ... 4265s Selecting previously unselected package python3-kiwisolver. 4266s Preparing to unpack .../81-python3-kiwisolver_1.4.4-2_arm64.deb ... 4266s Unpacking python3-kiwisolver (1.4.4-2) ... 4267s Selecting previously unselected package python3-packaging. 4268s Preparing to unpack .../82-python3-packaging_23.2-1_all.deb ... 4268s Unpacking python3-packaging (23.2-1) ... 4270s Selecting previously unselected package python3-matplotlib. 4270s Preparing to unpack .../83-python3-matplotlib_3.6.3-1ubuntu3_arm64.deb ... 4270s Unpacking python3-matplotlib (3.6.3-1ubuntu3) ... 4295s Selecting previously unselected package python3-pandas-lib:arm64. 4295s Preparing to unpack .../84-python3-pandas-lib_2.1.4+dfsg-4ubuntu2_arm64.deb ... 4295s Unpacking python3-pandas-lib:arm64 (2.1.4+dfsg-4ubuntu2) ... 4309s Selecting previously unselected package python3-pandas. 4309s Preparing to unpack .../85-python3-pandas_2.1.4+dfsg-4ubuntu2_all.deb ... 4309s Unpacking python3-pandas (2.1.4+dfsg-4ubuntu2) ... 4333s Selecting previously unselected package python3-wheel. 4333s Preparing to unpack .../86-python3-wheel_0.42.0-1_all.deb ... 4333s Unpacking python3-wheel (0.42.0-1) ... 4334s Selecting previously unselected package python3-parasail. 4335s Preparing to unpack .../87-python3-parasail_1.3.3-1_all.deb ... 4335s Unpacking python3-parasail (1.3.3-1) ... 4338s Selecting previously unselected package python3-pluggy. 4338s Preparing to unpack .../88-python3-pluggy_1.4.0-1_all.deb ... 4338s Unpacking python3-pluggy (1.4.0-1) ... 4339s Selecting previously unselected package python3-pysam. 4339s Preparing to unpack .../89-python3-pysam_0.22.0+ds-1_arm64.deb ... 4339s Unpacking python3-pysam (0.22.0+ds-1) ... 4358s Selecting previously unselected package python3-pytest. 4358s Preparing to unpack .../90-python3-pytest_7.4.4-1_all.deb ... 4358s Unpacking python3-pytest (7.4.4-1) ... 4360s Selecting previously unselected package python3-tqdm. 4361s Preparing to unpack .../91-python3-tqdm_4.64.1-2_all.deb ... 4361s Unpacking python3-tqdm (4.64.1-2) ... 4363s Selecting previously unselected package python3-pychopper. 4363s Preparing to unpack .../92-python3-pychopper_2.7.9-1_all.deb ... 4363s Unpacking python3-pychopper (2.7.9-1) ... 4363s Selecting previously unselected package autopkgtest-satdep. 4364s Preparing to unpack .../93-2-autopkgtest-satdep.deb ... 4364s Unpacking autopkgtest-satdep (0) ... 4364s Setting up libhtscodecs2:arm64 (1.6.0-1) ... 4364s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 4364s Setting up liblcms2-2:arm64 (2.14-2) ... 4364s Setting up python3-iniconfig (1.1.1-2) ... 4370s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 4370s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 4370s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 4370s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 4370s Setting up libparasail8:arm64 (2.6.2+dfsg-1) ... 4370s Setting up python3-lz4 (4.0.2+dfsg-1build2) ... 4377s Setting up libxcb-render0:arm64 (1.15-1) ... 4377s Setting up fonts-lyx (2.4.0~RC3-1) ... 4377s Setting up python3-tqdm (4.64.1-2) ... 4384s Setting up x11-common (1:7.7+23ubuntu2) ... 4411s Setting up libdeflate0:arm64 (1.19-1) ... 4411s Setting up libqhull-r8.0:arm64 (2020.2-6) ... 4411s Setting up python3-all (3.12.1-0ubuntu2) ... 4412s Setting up libxcb-shm0:arm64 (1.15-1) ... 4412s Setting up libparasail-dev:arm64 (2.6.2+dfsg-1) ... 4412s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 4412s Setting up python3-freetype (2.4.0-1) ... 4427s Setting up python3-wheel (0.42.0-1) ... 4439s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 4439s Setting up unicode-data (15.1.0-1) ... 4439s Setting up python3-decorator (5.1.1-5) ... 4447s Setting up libfontenc1:arm64 (1:1.1.8-1) ... 4447s Setting up libblas3:arm64 (3.12.0-3) ... 4447s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 4447s Setting up python3-packaging (23.2-1) ... 4459s Setting up python3-brotli (1.1.0-2) ... 4468s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 4468s Setting up python3-cycler (0.11.0-2) ... 4479s Setting up libimagequant0:arm64 (2.18.0-1) ... 4479s Setting up fonts-dejavu-mono (2.37-8) ... 4479s Setting up python3-kiwisolver (1.4.4-2) ... 4487s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 4487s Setting up fonts-dejavu-core (2.37-8) ... 4488s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 4488s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 4488s Setting up python3-pluggy (1.4.0-1) ... 4498s Setting up libwebp7:arm64 (1.3.2-0.4) ... 4498s Setting up fonts-dejavu-extra (2.37-8) ... 4498s Setting up libxslt1.1:arm64 (1.1.39-0exp1) ... 4498s Setting up libopenjp2-7:arm64 (2.5.0-2) ... 4498s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 4498s Setting up python3-dateutil (2.8.2-3) ... 4509s Setting up sgml-base (1.31) ... 4512s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 4512s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 4512s Setting up python3-mpmath (1.2.1-3) ... 4544s Setting up python-matplotlib-data (3.6.3-1ubuntu3) ... 4544s Setting up libwebpmux3:arm64 (1.3.2-0.4) ... 4544s Setting up python3-appdirs (1.4.4-4) ... 4551s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 4552s Setting up python3-sympy (1.12-7) ... 4870s Setting up liblapack3:arm64 (3.12.0-3) ... 4870s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 4870s Setting up libhts3:arm64 (1.18+ds-1) ... 4870s Setting up python3-pysam (0.22.0+ds-1) ... 4879s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 4891s Setting up python3-pytest (7.4.4-1) ... 4910s Setting up libwebpdemux2:arm64 (1.3.2-0.4) ... 4910s Setting up xfonts-utils (1:7.7+6build2) ... 4910s Setting up python3-fs (2.4.16-3) ... 4923s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 4923s Setting up libraqm0:arm64 (0.10.1-1) ... 4923s Setting up python3-numpy (1:1.24.2-2) ... 5035s Setting up python3-lxml:arm64 (5.1.0-1) ... 5046s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 5046s Setting up xml-core (0.19) ... 5057s Setting up python3-contourpy (1.0.7-1build2) ... 5064s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 5064s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1) ... 5064s Setting up libxft2:arm64 (2.3.6-1) ... 5064s Setting up python3-scipy (1.11.4-6) ... 5201s Setting up libtk8.6:arm64 (8.6.14-1) ... 5201s Setting up python3-pandas-lib:arm64 (2.1.4+dfsg-4ubuntu2) ... 5201s Setting up fonts-urw-base35 (20200910-8) ... 5210s Setting up python3-parasail (1.3.3-1) ... 5230s Setting up libcairo2:arm64 (1.18.0-1) ... 5230s Setting up python3-pil:arm64 (10.2.0-1) ... 5245s Setting up python3-pandas (2.1.4+dfsg-4ubuntu2) ... 5460s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... 5460s Setting up python3-cairo (1.25.1-2) ... 5470s Setting up blt (2.5.3+dfsg-7) ... 5470s Setting up python3-tk:arm64 (3.11.5-1) ... 5486s Setting up python3-pil.imagetk:arm64 (10.2.0-1) ... 5494s Setting up python3-rlpycairo (0.3.0-3) ... 5502s Setting up python3-reportlab (4.1.0-1) ... 5542s Setting up python3-fonttools (4.46.0-1) ... 5596s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 5606s Setting up python3-matplotlib (3.6.3-1ubuntu3) ... 5672s Processing triggers for libc-bin (2.39-0ubuntu6) ... 5673s Processing triggers for man-db (2.12.0-3) ... 5711s Processing triggers for sgml-base (1.31) ... 5711s Setting up w3c-sgml-lib (1.3-3) ... 6656s autopkgtest-virt-ssh [19:11:08]: ------- nova console-log 12507a09-43ad-4f24-9c88-96dfad2387ba (adt-noble-arm64-pychopper-20240324-170352-juju-7f2275-prod-proposed-migration-environment-2) ------ 6656s [2J[01;01H[=3h[2J[01;01H[2J[01;01H[=3h[2J[01;01H[2J[01;01H[=3h[2J[01;01H[2J[01;01H[=3h[2J[01;01H[2J[01;01H[=3h[2J[01;01H[2J[01;01H[=3h[2J[01;01H[0m[35m[40m[2J[01;01H[0m[37m[40mEFI stub: Booting Linux Kernel... 6656s EFI stub: EFI_RNG_PROTOCOL unavailable 6656s EFI stub: Loaded initrd from LINUX_EFI_INITRD_MEDIA_GUID device path 6656s EFI stub: Using DTB from configuration table 6656s EFI stub: Exiting boot services... 6656s [ 0.000000] Booting Linux on physical CPU 0x0000000000 [0x500f0001] 6656s [ 0.000000] Linux version 6.8.0-11-generic (buildd@bos01-arm64-028) (aarch64-linux-gnu-gcc-13 (Ubuntu 13.2.0-13ubuntu1) 13.2.0, GNU ld (GNU Binutils for Ubuntu) 2.42) #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 (Ubuntu 6.8.0-11.11-generic 6.8.0-rc4) 6656s [ 0.000000] KASLR disabled due to lack of seed 6656s [ 0.000000] Machine model: linux,dummy-virt 6656s [ 0.000000] efi: EFI v2.6 by EDK II 6656s [ 0.000000] efi: SMBIOS 3.0=0x9bdb0000 ACPI 2.0=0x986d0000 MEMATTR=0x9af0e898 MOKvar=0x985d0000 INITRD=0x985ebad8 MEMRESERVE=0x985eb718 6656s [ 0.000000] secureboot: Secure boot disabled 6656s [ 0.000000] NUMA: No NUMA configuration found 6656s [ 0.000000] NUMA: Faking a node at [mem 0x0000000040000000-0x000000009fffffff] 6656s [ 0.000000] NUMA: NODE_DATA [mem 0x9fcf55c0-0x9fcfafff] 6656s [ 0.000000] Zone ranges: 6656s [ 0.000000] DMA [mem 0x0000000040000000-0x000000009fffffff] 6656s [ 0.000000] DMA32 empty 6656s [ 0.000000] Normal empty 6656s [ 0.000000] Device empty 6656s [ 0.000000] Movable zone start for each node 6656s [ 0.000000] Early memory node ranges 6656s [ 0.000000] node 0: [mem 0x0000000040000000-0x00000000985cffff] 6656s [ 0.000000] node 0: [mem 0x00000000985d0000-0x00000000985dffff] 6656s [ 0.000000] node 0: [mem 0x00000000985e0000-0x00000000985ebfff] 6656s [ 0.000000] node 0: [mem 0x00000000985ec000-0x00000000986bffff] 6656s [ 0.000000] node 0: [mem 0x00000000986c0000-0x00000000986dffff] 6656s [ 0.000000] node 0: [mem 0x00000000986e0000-0x000000009874ffff] 6656s [ 0.000000] node 0: [mem 0x0000000098750000-0x000000009bc1ffff] 6656s [ 0.000000] node 0: [mem 0x000000009bc20000-0x000000009bffffff] 6656s [ 0.000000] node 0: [mem 0x000000009c000000-0x000000009fffffff] 6656s [ 0.000000] Initmem setup node 0 [mem 0x0000000040000000-0x000000009fffffff] 6656s [ 0.000000] cma: Reserved 32 MiB at 0x000000009c400000 on node -1 6656s [ 0.000000] psci: probing for conduit method from DT. 6656s [ 0.000000] psci: PSCIv0.2 detected in firmware. 6656s [ 0.000000] psci: Using standard PSCI v0.2 function IDs 6656s [ 0.000000] psci: Trusted OS migration not required 6656s [ 0.000000] percpu: Embedded 54 pages/cpu s95336 r8192 d117656 u221184 6656s [ 0.000000] Detected PIPT I-cache on CPU0 6656s [ 0.000000] CPU features: detected: Spectre-v2 6656s [ 0.000000] CPU features: detected: Spectre-v4 6656s [ 0.000000] CPU features: detected: Kernel page table isolation (KPTI) 6656s [ 0.000000] alternatives: applying boot alternatives 6656s [ 0.000000] Kernel command line: BOOT_IMAGE=/vmlinuz-6.8.0-11-generic root=UUID=d6a9ac11-aabc-4133-bcca-2073e97f7a95 ro console=tty1 console=ttyAMA0 6656s [ 0.000000] Unknown kernel command line parameters "BOOT_IMAGE=/vmlinuz-6.8.0-11-generic", will be passed to user space. 6656s [ 0.000000] Dentry cache hash table entries: 262144 (order: 9, 2097152 bytes, linear) 6656s [ 0.000000] Inode-cache hash table entries: 131072 (order: 8, 1048576 bytes, linear) 6656s [ 0.000000] Fallback order for Node 0: 0 6656s [ 0.000000] Built 1 zonelists, mobility grouping on. Total pages: 387072 6656s [ 0.000000] Policy zone: DMA 6656s [ 0.000000] mem auto-init: stack:all(zero), heap alloc:on, heap free:off 6656s [ 0.000000] software IO TLB: SWIOTLB bounce buffer size adjusted to 1MB 6656s [ 0.000000] software IO TLB: area num 1. 6656s [ 0.000000] software IO TLB: SWIOTLB bounce buffer size roundup to 2MB 6656s [ 0.000000] software IO TLB: mapped [mem 0x000000009ba20000-0x000000009bc20000] (2MB) 6656s [ 0.000000] Memory: 1382236K/1572864K available (22912K kernel code, 5164K rwdata, 15944K rodata, 12224K init, 1218K bss, 157860K reserved, 32768K cma-reserved) 6656s [ 0.000000] SLUB: HWalign=64, Order=0-3, MinObjects=0, CPUs=1, Nodes=1 6656s [ 0.000000] ftrace: allocating 62323 entries in 244 pages 6656s [ 0.000000] ftrace: allocated 244 pages with 5 groups 6656s [ 0.000000] trace event string verifier disabled 6656s [ 0.000000] Dynamic Preempt: voluntary 6656s [ 0.000000] rcu: Preemptible hierarchical RCU implementation. 6656s [ 0.000000] rcu: RCU restricting CPUs from NR_CPUS=512 to nr_cpu_ids=1. 6656s [ 0.000000] Trampoline variant of Tasks RCU enabled. 6656s [ 0.000000] Rude variant of Tasks RCU enabled. 6656s [ 0.000000] Tracing variant of Tasks RCU enabled. 6656s [ 0.000000] rcu: RCU calculated value of scheduler-enlistment delay is 25 jiffies. 6656s [ 0.000000] rcu: Adjusting geometry for rcu_fanout_leaf=16, nr_cpu_ids=1 6656s [ 0.000000] NR_IRQS: 64, nr_irqs: 64, preallocated irqs: 0 6656s [ 0.000000] Root IRQ handler: gic_handle_irq 6656s [ 0.000000] GICv2m: range[mem 0x08020000-0x08020fff], SPI[80:143] 6656s [ 0.000000] rcu: srcu_init: Setting srcu_struct sizes based on contention. 6656s [ 0.000000] GIC: PPI11 is secure or misconfigured 6656s [ 0.000000] arch_timer: Broken CNTx_CVAL_EL1, using 31 bit TVAL instead. 6656s [ 0.000000] arch_timer: WARNING: Invalid trigger for IRQ11, assuming level low 6656s [ 0.000000] arch_timer: WARNING: Please fix your firmware 6656s [ 0.000000] arch_timer: cp15 timer(s) running at 50.00MHz (virt). 6656s [ 0.000000] clocksource: arch_sys_counter: mask: 0xffffffffffffff max_cycles: 0xb8812736b, max_idle_ns: 440795202655 ns 6656s [ 0.000004] sched_clock: 56 bits at 50MHz, resolution 20ns, wraps every 4398046511100ns 6656s [ 0.001838] Console: colour dummy device 80x25 6656s [ 0.001887] printk: legacy console [tty1] enabled 6656s [ 0.008754] Calibrating delay loop (skipped), value calculated using timer frequency.. 100.00 BogoMIPS (lpj=200000) 6656s [ 0.008873] pid_max: default: 32768 minimum: 301 6656s [ 0.017866] LSM: initializing lsm=lockdown,capability,landlock,yama,apparmor,integrity 6656s [ 0.018454] landlock: Up and running. 6656s [ 0.018522] Yama: becoming mindful. 6656s [ 0.020294] AppArmor: AppArmor initialized 6656s [ 0.024599] Mount-cache hash table entries: 4096 (order: 3, 32768 bytes, linear) 6656s [ 0.024939] Mountpoint-cache hash table entries: 4096 (order: 3, 32768 bytes, linear) 6656s [ 0.041520] cacheinfo: Unable to detect cache hierarchy for CPU 0 6656s [ 0.049061] RCU Tasks: Setting shift to 0 and lim to 1 rcu_task_cb_adjust=1. 6656s [ 0.050087] RCU Tasks Rude: Setting shift to 0 and lim to 1 rcu_task_cb_adjust=1. 6656s [ 0.050958] RCU Tasks Trace: Setting shift to 0 and lim to 1 rcu_task_cb_adjust=1. 6656s [ 0.053464] rcu: Hierarchical SRCU implementation. 6656s [ 0.053537] rcu: Max phase no-delay instances is 1000. 6656s [ 0.060370] Remapping and enabling EFI services. 6656s [ 0.064080] smp: Bringing up secondary CPUs ... 6656s [ 0.064217] smp: Brought up 1 node, 1 CPU 6656s [ 0.064270] SMP: Total of 1 processors activated. 6656s [ 0.064309] CPU: All CPU(s) started at EL1 6656s [ 0.064416] CPU features: detected: 32-bit EL0 Support 6656s [ 0.064462] CPU features: detected: 32-bit EL1 Support 6656s [ 0.064719] alternatives: applying system-wide alternatives 6656s [ 0.067415] CPU features: emulated: Privileged Access Never (PAN) using TTBR0_EL1 switching 6656s [ 0.082602] devtmpfs: initialized 6656s [ 0.102402] clocksource: jiffies: mask: 0xffffffff max_cycles: 0xffffffff, max_idle_ns: 7645041785100000 ns 6656s [ 0.102546] futex hash table entries: 256 (order: 2, 16384 bytes, linear) 6656s [ 0.124924] pinctrl core: initialized pinctrl subsystem 6656s [ 0.152849] SMBIOS 3.0.0 present. 6656s [ 0.152961] DMI: QEMU KVM Virtual Machine, BIOS 0.0.0 02/06/2015 6656s [ 0.166380] NET: Registered PF_NETLINK/PF_ROUTE protocol family 6656s [ 0.170662] DMA: preallocated 256 KiB GFP_KERNEL pool for atomic allocations 6656s [ 0.171576] DMA: preallocated 256 KiB GFP_KERNEL|GFP_DMA pool for atomic allocations 6656s [ 0.172652] DMA: preallocated 256 KiB GFP_KERNEL|GFP_DMA32 pool for atomic allocations 6656s [ 0.172938] audit: initializing netlink subsys (disabled) 6656s [ 0.174120] audit: type=2000 audit(0.124:1): state=initialized audit_enabled=0 res=1 6656s [ 0.180121] thermal_sys: Registered thermal governor 'fair_share' 6656s [ 0.180162] thermal_sys: Registered thermal governor 'bang_bang' 6656s [ 0.180224] thermal_sys: Registered thermal governor 'step_wise' 6656s [ 0.180270] thermal_sys: Registered thermal governor 'user_space' 6656s [ 0.180313] thermal_sys: Registered thermal governor 'power_allocator' 6656s [ 0.180576] cpuidle: using governor ladder 6656s [ 0.180755] cpuidle: using governor menu 6656s [ 0.181585] hw-breakpoint: found 4 breakpoint and 4 watchpoint registers. 6656s [ 0.181832] ASID allocator initialised with 32768 entries 6656s [ 0.190939] Serial: AMBA PL011 UART driver 6656s [ 0.232273] 9000000.pl011: ttyAMA0 at MMIO 0x9000000 (irq = 13, base_baud = 0) is a PL011 rev1 6656s [ 0.232971] printk: legacy console [ttyAMA0] enabled 6656s [ 1.308635] Modules: 18336 pages in range for non-PLT usage 6656s [ 1.308683] Modules: 509856 pages in range for PLT usage 6656s [ 1.324865] HugeTLB: registered 1.00 GiB page size, pre-allocated 0 pages 6656s [ 1.339658] HugeTLB: 0 KiB vmemmap can be freed for a 1.00 GiB page 6656s [ 1.347240] HugeTLB: registered 32.0 MiB page size, pre-allocated 0 pages 6656s [ 1.356035] HugeTLB: 0 KiB vmemmap can be freed for a 32.0 MiB page 6656s [ 1.363503] HugeTLB: registered 2.00 MiB page size, pre-allocated 0 pages 6656s [ 1.379834] HugeTLB: 0 KiB vmemmap can be freed for a 2.00 MiB page 6656s [ 1.387414] HugeTLB: registered 64.0 KiB page size, pre-allocated 0 pages 6656s [ 1.406962] HugeTLB: 0 KiB vmemmap can be freed for a 64.0 KiB page 6656s [ 1.654600] fbcon: Taking over console 6656s [ 1.660626] ACPI: Interpreter disabled. 6656s [ 1.688403] iommu: Default domain type: Translated 6656s [ 1.688435] iommu: DMA domain TLB invalidation policy: strict mode 6656s [ 1.765812] SCSI subsystem initialized 6656s [ 1.802058] usbcore: registered new interface driver usbfs 6656s [ 1.802208] usbcore: registered new interface driver hub 6656s [ 1.802471] usbcore: registered new device driver usb 6656s [ 1.803634] pps_core: LinuxPPS API ver. 1 registered 6656s [ 1.803659] pps_core: Software ver. 5.3.6 - Copyright 2005-2007 Rodolfo Giometti 6656s [ 1.803848] PTP clock support registered 6656s [ 1.806037] EDAC MC: Ver: 3.0.0 6656s [ 1.827576] scmi_core: SCMI protocol bus registered 6656s [ 1.828845] efivars: Registered efivars operations 6656s [ 1.852041] NetLabel: Initializing 6656s [ 1.852068] NetLabel: domain hash size = 128 6656s [ 1.852084] NetLabel: protocols = UNLABELED CIPSOv4 CALIPSO 6656s [ 1.852741] NetLabel: unlabeled traffic allowed by default 6656s [ 1.853828] mctp: management component transport protocol core 6656s [ 1.853851] NET: Registered PF_MCTP protocol family 6656s [ 1.880540] vgaarb: loaded 6656s [ 1.904654] clocksource: Switched to clocksource arch_sys_counter 6656s [ 1.966841] VFS: Disk quotas dquot_6.6.0 6656s [ 1.967444] VFS: Dquot-cache hash table entries: 512 (order 0, 4096 bytes) 6656s [ 1.987445] AppArmor: AppArmor Filesystem Enabled 6656s [ 1.987757] pnp: PnP ACPI: disabled 6656s [ 2.249612] NET: Registered PF_INET protocol family 6656s [ 2.258394] IP idents hash table entries: 32768 (order: 6, 262144 bytes, linear) 6656s [ 2.849140] tcp_listen_portaddr_hash hash table entries: 1024 (order: 2, 16384 bytes, linear) 6656s [ 2.892352] Table-perturb hash table entries: 65536 (order: 6, 262144 bytes, linear) 6656s [ 2.901890] TCP established hash table entries: 16384 (order: 5, 131072 bytes, linear) 6656s [ 2.911729] TCP bind hash table entries: 16384 (order: 7, 524288 bytes, linear) 6656s [ 2.921777] TCP: Hash tables configured (established 16384 bind 16384) 6656s [ 2.931108] MPTCP token hash table entries: 2048 (order: 3, 49152 bytes, linear) 6656s [ 2.940413] UDP hash table entries: 1024 (order: 3, 32768 bytes, linear) 6656s [ 2.949132] UDP-Lite hash table entries: 1024 (order: 3, 32768 bytes, linear) 6656s [ 2.958899] NET: Registered PF_UNIX/PF_LOCAL protocol family 6656s [ 2.965844] NET: Registered PF_XDP protocol family 6656s [ 2.971775] PCI: CLS 0 bytes, default 64 6656s [ 2.977690] Trying to unpack rootfs image as initramfs... 6656s [ 2.985127] kvm [1]: HYP mode not available 6656s [ 3.007417] Initialise system trusted keyrings 6656s [ 3.021317] Key type blacklist registered 6656s [ 3.035414] workingset: timestamp_bits=40 max_order=19 bucket_order=0 6656s [ 3.053191] zbud: loaded 6656s [ 3.137005] squashfs: version 4.0 (2009/01/31) Phillip Lougher 6656s [ 3.189019] fuse: init (API version 7.39) 6656s [ 3.197023] integrity: Platform Keyring initialized 6656s [ 3.208982] integrity: Machine keyring initialized 6656s [ 3.517130] Key type asymmetric registered 6656s [ 3.525296] Asymmetric key parser 'x509' registered 6656s [ 3.537279] Block layer SCSI generic (bsg) driver version 0.4 loaded (major 242) 6656s [ 3.557820] io scheduler mq-deadline registered 6656s [ 3.623931] shpchp: Standard Hot Plug PCI Controller Driver version: 0.4 6656s [ 3.648357] pci-host-generic 3f000000.pcie: host bridge /pcie@10000000 ranges: 6656s [ 3.668944] pci-host-generic 3f000000.pcie: IO 0x003eff0000..0x003effffff -> 0x0000000000 6656s [ 3.693112] pci-host-generic 3f000000.pcie: MEM 0x0010000000..0x003efeffff -> 0x0010000000 6656s [ 3.712949] pci-host-generic 3f000000.pcie: MEM 0x8000000000..0xffffffffff -> 0x8000000000 6656s [ 3.733040] pci-host-generic 3f000000.pcie: Memory resource size exceeds max for 32 bits 6656s [ 3.742818] PCI: OF: PROBE_ONLY enabled 6656s [ 3.766805] pci-host-generic 3f000000.pcie: ECAM at [mem 0x3f000000-0x3fffffff] for [bus 00-0f] 6656s [ 3.794030] pci-host-generic 3f000000.pcie: PCI host bridge to bus 0000:00 6656s [ 3.809111] pci_bus 0000:00: root bus resource [bus 00-0f] 6656s [ 3.824878] pci_bus 0000:00: root bus resource [io 0x0000-0xffff] 6656s [ 3.846874] pci_bus 0000:00: root bus resource [mem 0x10000000-0x3efeffff] 6656s [ 3.894772] pci_bus 0000:00: root bus resource [mem 0x8000000000-0xffffffffff] 6656s [ 3.921204] pci 0000:00:00.0: [1b36:0008] type 00 class 0x060000 conventional PCI endpoint 6656s [ 3.942390] pci 0000:00:01.0: [8086:244e] type 01 class 0x060401 conventional PCI bridge 6656s [ 3.999438] pci 0000:00:01.0: PCI bridge to [bus 01-02] (subtractive decode) 6656s [ 4.013205] pci 0000:00:01.0: bridge window [mem 0x3ee00000-0x3eefffff] 6656s [ 4.177534] pci_bus 0000:01: extended config space not accessible 6656s [ 4.194018] pci 0000:01:01.0: [1b36:0001] type 01 class 0x060400 conventional PCI bridge 6656s [ 4.239086] pci 0000:01:01.0: BAR 0 [mem 0x3ee00000-0x3ee000ff 64bit] 6656s [ 4.270173] pci 0000:01:01.0: PCI bridge to [bus 02] 6656s [ 4.549374] pci_bus 0000:02: extended config space not accessible 6656s [ 4.601312] pci 0000:00:01.0: PCI bridge to [bus 01-02] (subtractive decode) 6656s [ 4.665071] pci 0000:00:01.0: bridge window [io 0x0000-0xffff] (subtractive decode) 6656s [ 4.684999] pci 0000:00:01.0: bridge window [mem 0x10000000-0x3efeffff] (subtractive decode) 6656s [ 4.709068] pci 0000:00:01.0: bridge window [mem 0x8000000000-0xffffffffff] (subtractive decode) 6656s [ 4.719742] pci 0000:01:01.0: PCI bridge to [bus 02] 6656s [ 4.747073] shpchp 0000:01:01.0: HPC vendor_id 1b36 device_id 1 ss_vid 0 ss_did 0 6656s [ 5.037805] Serial: 8250/16550 driver, 32 ports, IRQ sharing enabled 6656s [ 5.190830] msm_serial: driver initialized 6656s [ 5.216119] SuperH (H)SCI(F) driver initialized 6656s [ 5.390826] loop: module loaded 6656s [ 5.418407] virtio_scsi virtio2: 1/0/0 default/read/poll queues 6656s [ 5.439857] scsi host0: Virtio SCSI HBA 6656s [ 5.478763] scsi 0:0:0:0: Direct-Access QEMU QEMU HARDDISK 2.5+ PQ: 0 ANSI: 5 6656s [ 5.498894] tun: Universal TUN/TAP device driver, 1.6 6656s [ 5.679517] PPP generic driver version 2.4.2 6656s [ 5.757950] mousedev: PS/2 mouse device common for all mice 6656s [ 5.910123] rtc-efi rtc-efi.0: registered as rtc0 6656s [ 6.041222] rtc-efi rtc-efi.0: setting system clock to 2024-03-24T18:16:09 UTC (1711304169) 6656s [ 6.189374] i2c_dev: i2c /dev entries driver 6656s [ 6.433390] device-mapper: core: CONFIG_IMA_DISABLE_HTABLE is disabled. Duplicate IMA measurements will not be recorded in the IMA log. 6656s [ 6.543512] device-mapper: uevent: version 1.0.3 6656s [ 6.550945] device-mapper: ioctl: 4.48.0-ioctl (2023-03-01) initialised: dm-devel@redhat.com 6656s [ 6.669007] ledtrig-cpu: registered to indicate activity on CPUs 6656s [ 6.732563] watchdog: Delayed init of the lockup detector failed: -19 6656s [ 6.744505] watchdog: Hard watchdog permanently disabled 6656s [ 6.784082] drop_monitor: Initializing network drop monitor service 6656s [ 6.889934] NET: Registered PF_INET6 protocol family 6656s [ 7.468306] sd 0:0:0:0: Power-on or device reset occurred 6656s [ 7.481030] sd 0:0:0:0: Attached scsi generic sg0 type 0 6656s [ 7.494390] sd 0:0:0:0: [sda] 41943040 512-byte logical blocks: (21.5 GB/20.0 GiB) 6656s [ 7.517939] sd 0:0:0:0: [sda] Write Protect is off 6656s [ 7.534519] sd 0:0:0:0: [sda] Write cache: enabled, read cache: enabled, doesn't support DPO or FUA 6656s [ 7.701143] sda: sda1 sda15 sda16 6656s [ 7.716489] sd 0:0:0:0: [sda] Attached SCSI disk 6656s [ 9.681821] Freeing initrd memory: 61152K 6656s [ 9.840912] Segment Routing with IPv6 6656s [ 9.846149] In-situ OAM (IOAM) with IPv6 6656s [ 9.852109] NET: Registered PF_PACKET protocol family 6656s [ 9.859623] Key type dns_resolver registered 6656s [ 9.933954] registered taskstats version 1 6656s [ 9.945826] Loading compiled-in X.509 certificates 6656s [ 9.966865] Loaded X.509 cert 'Build time autogenerated kernel key: 8828c162fbc3a8a7d2749a4f584fbba0ab685aca' 6656s [ 9.997393] Loaded X.509 cert 'Canonical Ltd. Live Patch Signing: 14df34d1a87cf37625abec039ef2bf521249b969' 6656s [ 10.036055] Loaded X.509 cert 'Canonical Ltd. Kernel Module Signing: 88f752e560a1e0737e31163a466ad7b70a850c19' 6656s [ 10.061360] blacklist: Loading compiled-in revocation X.509 certificates 6656s [ 10.078860] Loaded X.509 cert 'Canonical Ltd. Secure Boot Signing: 61482aa2830d0ab2ad5af10b7250da9033ddcef0' 6656s [ 10.104140] Loaded X.509 cert 'Canonical Ltd. Secure Boot Signing (2017): 242ade75ac4a15e50d50c84b0d45ff3eae707a03' 6656s [ 10.134732] Loaded X.509 cert 'Canonical Ltd. Secure Boot Signing (ESM 2018): 365188c1d374d6b07c3c8f240f8ef722433d6a8b' 6656s [ 10.157198] Loaded X.509 cert 'Canonical Ltd. Secure Boot Signing (2019): c0746fd6c5da3ae827864651ad66ae47fe24b3e8' 6656s [ 10.187492] Loaded X.509 cert 'Canonical Ltd. Secure Boot Signing (2021 v1): a8d54bbb3825cfb94fa13c9f8a594a195c107b8d' 6656s [ 10.221294] Loaded X.509 cert 'Canonical Ltd. Secure Boot Signing (2021 v2): 4cf046892d6fd3c9a5b03f98d845f90851dc6a8c' 6656s [ 10.247400] Loaded X.509 cert 'Canonical Ltd. Secure Boot Signing (2021 v3): 100437bb6de6e469b581e61cd66bce3ef4ed53af' 6656s [ 10.273429] Loaded X.509 cert 'Canonical Ltd. Secure Boot Signing (Ubuntu Core 2019): c1d57b8f6b743f23ee41f4f7ee292f06eecadfb9' 6656s [ 10.428498] Key type .fscrypt registered 6656s [ 10.436363] Key type fscrypt-provisioning registered 6656s [ 10.836991] Key type encrypted registered 6656s [ 10.843089] AppArmor: AppArmor sha256 policy hashing enabled 6656s [ 10.851149] ima: secureboot mode disabled 6656s [ 10.856451] ima: No TPM chip found, activating TPM-bypass! 6656s [ 10.863996] Loading compiled-in module X.509 certificates 6656s [ 10.880752] Loaded X.509 cert 'Build time autogenerated kernel key: 8828c162fbc3a8a7d2749a4f584fbba0ab685aca' 6656s [ 10.893654] ima: Allocated hash algorithm: sha256 6656s [ 10.899929] ima: No architecture policies found 6656s [ 10.910545] evm: Initialising EVM extended attributes: 6656s [ 10.921225] evm: security.selinux 6656s [ 10.933739] evm: security.SMACK64 6656s [ 10.950490] evm: security.SMACK64EXEC 6656s [ 10.959279] evm: security.SMACK64TRANSMUTE 6656s [ 10.966371] evm: security.SMACK64MMAP 6656s [ 10.971199] evm: security.apparmor 6656s [ 10.975591] evm: security.ima 6656s [ 10.979543] evm: security.capability 6656s [ 10.984123] evm: HMAC attrs: 0x1 6656s [ 11.047522] clk: Disabling unused clocks 6656s [ 11.085987] Freeing unused kernel memory: 12224K 6656s [ 11.252540] Checked W+X mappings: passed, no W+X pages found 6656s [ 11.276734] Run /init as init process 6656s Loading, please wait... 6656s Starting systemd-udevd version 255.2-3ubuntu2 6656s Begin: Loading essential drivers ... done. 6656s Begin: Running /scripts/init-premount ... done. 6656s Begin: Mounting root file system ... Begin: Running /scripts/local-top ... done. 6656s Begin: Running /scripts/local-premount ... [ 32.140718] raid6: neonx8 gen() 476 MB/s 6656s [ 32.212703] raid6: neonx4 gen() 520 MB/s 6656s [ 32.284703] raid6: neonx2 gen() 532 MB/s 6656s [ 32.356688] raid6: neonx1 gen() 530 MB/s 6656s [ 32.428694] raid6: int64x8 gen() 398 MB/s 6656s [ 32.500728] raid6: int64x4 gen() 495 MB/s 6656s [ 32.576702] raid6: int64x2 gen() 319 MB/s 6656s [ 32.648698] raid6: int64x1 gen() 278 MB/s 6656s [ 32.653394] raid6: using algorithm neonx2 gen() 532 MB/s 6656s [ 32.724685] raid6: .... xor() 419 MB/s, rmw enabled 6656s [ 32.730089] raid6: using neon recovery algorithm 6656s [ 32.772572] xor: measuring software checksum speed 6656s [ 32.784906] 8regs : 1484 MB/sec 6656s [ 32.796376] 32regs : 1510 MB/sec 6656s [ 32.811420] arm64_neon : 1054 MB/sec 6656s [ 32.816387] xor: using function: 32regs (1510 MB/sec) 6656s [ 33.636898] Btrfs loaded, zoned=yes, fsverity=yes 6656s Scanning for Btrfs filesystems 6656s done. 6656s Begin: Will now check root file system ... fsck from util-linux 2.39.3 6656s [/usr/sbin/fsck.ext4 (1) -- /dev/sda1] fsck.ext4 -a -C0 /dev/sda1 6656s cloudimg-rootfs: recovering journal 6656s cloudimg-rootfs: clean, 83296/2490368 files, 664223/4980475 blocks 6656s done. 6656s [ 34.985623] EXT4-fs (sda1): mounted filesystem d6a9ac11-aabc-4133-bcca-2073e97f7a95 ro with ordered data mode. Quota mode: none. 6656s done. 6656s Begin: Running /scripts/local-bottom ... done. 6656s Begin: Running /scripts/init-bottom ... done. 6656s [ 38.689918] systemd[1]: Inserted module 'autofs4' 6656s [ 39.027327] systemd[1]: systemd 255.2-3ubuntu2 running in system mode (+PAM +AUDIT +SELINUX +APPARMOR +IMA +SMACK +SECCOMP +GCRYPT -GNUTLS +OPENSSL +ACL +BLKID +CURL +ELFUTILS +FIDO2 +IDN2 -IDN +IPTC +KMOD +LIBCRYPTSETUP +LIBFDISK +PCRE2 -PWQUALITY +P11KIT +QRENCODE +TPM2 +BZIP2 +LZ4 +XZ +ZLIB +ZSTD -BPF_FRAMEWORK -XKBCOMMON +UTMP +SYSVINIT default-hierarchy=unified) 6656s [ 39.082634] systemd[1]: Detected virtualization kvm. 6656s [ 39.090864] systemd[1]: Detected architecture arm64. 6656s 6656s Welcome to [1mUbuntu Noble Numbat (development branch)[0m! 6656s 6656s [ 39.126598] systemd[1]: Hostname set to . 6656s [ 39.528854] random: crng init done 6656s [ 44.400499] systemd[1]: Queued start job for default target graphical.target. 6656s [ 44.570572] systemd[1]: Created slice system-autopkgtest.slice - Slice /system/autopkgtest. 6656s [[0;32m OK [0m] Created slice [0;1;39msystem-autopkgtest.slice[0m - Slice /system/autopkgtest. 6656s [ 44.674515] systemd[1]: Created slice system-modprobe.slice - Slice /system/modprobe. 6656s [[0;32m OK [0m] Created slice [0;1;39msystem-modprobe.slice[0m - Slice /system/modprobe. 6656s [ 44.771788] systemd[1]: Created slice system-serial\x2dgetty.slice - Slice /system/serial-getty. 6656s [[0;32m OK [0m] Created slice [0;1;39msystem-serial\x2dget?slice[0m - Slice /system/serial-getty. 6656s [ 44.871746] systemd[1]: Created slice system-systemd\x2dfsck.slice - Slice /system/systemd-fsck. 6656s [[0;32m OK [0m] Created slice [0;1;39msystem-systemd\x2dfs?slice[0m - Slice /system/systemd-fsck. 6656s [ 44.968985] systemd[1]: Created slice user.slice - User and Session Slice. 6656s [[0;32m OK [0m] Created slice [0;1;39muser.slice[0m - User and Session Slice. 6656s [ 45.006196] systemd[1]: Started systemd-ask-password-wall.path - Forward Password Requests to Wall Directory Watch. 6656s [[0;32m OK [0m] Started [0;1;39msystemd-ask-password-wall.?[0md Requests to Wall Directory Watch. 6656s [ 45.036010] systemd[1]: Set up automount proc-sys-fs-binfmt_misc.automount - Arbitrary Executable File Formats File System Automount Point. 6656s [[0;32m OK [0m] Set up automount [0;1;39mproc-sys-fs-binfm?[0mormats File System Automount Point. 6656s [ 45.064510] systemd[1]: Expecting device dev-disk-by\x2dlabel-BOOT.device - /dev/disk/by-label/BOOT... 6656s Expecting device [0;1;39mdev-disk-by\x2dla?device[0m - /dev/disk/by-label/BOOT... 6656s [ 45.088154] systemd[1]: Expecting device dev-disk-by\x2dlabel-UEFI.device - /dev/disk/by-label/UEFI... 6656s Expecting device [0;1;39mdev-disk-by\x2dla?device[0m - /dev/disk/by-label/UEFI... 6656s [ 45.110949] systemd[1]: Expecting device dev-ttyAMA0.device - /dev/ttyAMA0... 6656s Expecting device [0;1;39mdev-ttyAMA0.device[0m - /dev/ttyAMA0... 6656s [ 45.129934] systemd[1]: Reached target integritysetup.target - Local Integrity Protected Volumes. 6656s [[0;32m OK [0m] Reached target [0;1;39mintegritysetup.targ?[0m Local Integrity Protected Volumes. 6656s [ 45.153513] systemd[1]: Reached target remote-fs.target - Remote File Systems. 6656s [[0;32m OK [0m] Reached target [0;1;39mremote-fs.target[0m - Remote File Systems. 6656s [ 45.173217] systemd[1]: Reached target slices.target - Slice Units. 6656s [[0;32m OK [0m] Reached target [0;1;39mslices.target[0m - Slice Units. 6656s [ 45.190521] systemd[1]: Reached target swap.target - Swaps. 6656s [[0;32m OK [0m] Reached target [0;1;39mswap.target[0m - Swaps. 6656s [ 45.206330] systemd[1]: Reached target veritysetup.target - Local Verity Protected Volumes. 6656s [[0;32m OK [0m] Reached target [0;1;39mveritysetup.target[0m - Local Verity Protected Volumes. 6656s [ 45.231954] systemd[1]: Listening on multipathd.socket - multipathd control socket. 6656s [[0;32m OK [0m] Listening on [0;1;39mmultipathd.socket[0m - multipathd control socket. 6656s [ 45.255685] systemd[1]: Listening on syslog.socket - Syslog Socket. 6656s [[0;32m OK [0m] Listening on [0;1;39msyslog.socket[0m - Syslog Socket. 6656s [ 45.275877] systemd[1]: Listening on systemd-fsckd.socket - fsck to fsckd communication Socket. 6656s [[0;32m OK [0m] Listening on [0;1;39msystemd-fsckd.socket[0m ?fsck to fsckd communication Socket. 6656s [ 45.300459] systemd[1]: Listening on systemd-initctl.socket - initctl Compatibility Named Pipe. 6656s [[0;32m OK [0m] Listening on [0;1;39msystemd-initctl.socke?[0m- initctl Compatibility Named Pipe. 6656s [ 45.327261] systemd[1]: Listening on systemd-journald-dev-log.socket - Journal Socket (/dev/log). 6656s [[0;32m OK [0m] Listening on [0;1;39msystemd-journald-dev-?socket[0m - Journal Socket (/dev/log). 6656s [ 45.354494] systemd[1]: Listening on systemd-journald.socket - Journal Socket. 6656s [[0;32m OK [0m] Listening on [0;1;39msystemd-journald.socket[0m - Journal Socket. 6656s [ 45.376952] systemd[1]: Listening on systemd-networkd.socket - Network Service Netlink Socket. 6656s [[0;32m OK [0m] Listening on [0;1;39msystemd-networkd.socket[0m - Network Service Netlink Socket. 6656s [ 45.399266] systemd[1]: systemd-pcrextend.socket - TPM2 PCR Extension (Varlink) was skipped because of an unmet condition check (ConditionSecurity=measured-uki). 6656s [ 45.420261] systemd[1]: Listening on systemd-udevd-control.socket - udev Control Socket. 6656s [[0;32m OK [0m] Listening on [0;1;39msystemd-udevd-control.socket[0m - udev Control Socket. 6656s [ 45.443991] systemd[1]: Listening on systemd-udevd-kernel.socket - udev Kernel Socket. 6656s [[0;32m OK [0m] Listening on [0;1;39msystemd-udevd-kernel.socket[0m - udev Kernel Socket. 6656s [ 45.497860] systemd[1]: Mounting dev-hugepages.mount - Huge Pages File System... 6656s Mounting [0;1;39mdev-hugepages.mount[0m - Huge Pages File System... 6656s [ 45.585760] systemd[1]: Mounting dev-mqueue.mount - POSIX Message Queue File System... 6656s Mounting [0;1;39mdev-mqueue.mount[0m - POSIX Message Queue File System... 6656s [ 45.706065] systemd[1]: Mounting sys-kernel-debug.mount - Kernel Debug File System... 6656s Mounting [0;1;39msys-kernel-debug.mount[0m - Kernel Debug File System... 6656s [ 45.881890] systemd[1]: Mounting sys-kernel-tracing.mount - Kernel Trace File System... 6656s Mounting [0;1;39msys-kernel-tracing.mount[0m - Kernel Trace File System... 6656s [ 46.047040] systemd[1]: Starting keyboard-setup.service - Set the console keyboard layout... 6656s Starting [0;1;39mkeyboard-setup.service[0m - Set the console keyboard layout... 6656s [ 46.190288] systemd[1]: Starting kmod-static-nodes.service - Create List of Static Device Nodes... 6656s Starting [0;1;39mkmod-static-nodes.service[0m?eate List of Static Device Nodes... 6656s [ 46.705097] systemd[1]: Starting modprobe@configfs.service - Load Kernel Module configfs... 6656s Starting [0;1;39mmodprobe@configfs.service[0m - Load Kernel Module configfs... 6656s [ 47.378396] systemd[1]: Starting modprobe@dm_mod.service - Load Kernel Module dm_mod... 6656s Starting [0;1;39mmodprobe@dm_mod.service[0m - Load Kernel Module dm_mod... 6656s [ 47.838878] systemd[1]: Starting modprobe@drm.service - Load Kernel Module drm... 6656s Starting [0;1;39mmodprobe@drm.service[0m - Load Kernel Module drm... 6656s [ 48.636166] systemd[1]: Starting modprobe@efi_pstore.service - Load Kernel Module efi_pstore... 6656s Starting [0;1;39mmodprobe@efi_pstore.servi?[0m - Load Kernel Module efi_pstore... 6656s [ 48.962900] systemd[1]: Starting modprobe@fuse.service - Load Kernel Module fuse... 6656s Starting [0;1;39mmodprobe@fuse.service[0m - Load Kernel Module fuse... 6656s [ 49.219308] systemd[1]: Starting modprobe@loop.service - Load Kernel Module loop... 6656s Starting [0;1;39mmodprobe@loop.service[0m - Load Kernel Module loop...[ 49.391134] pstore: Using crash dump compression: deflate 6656s [ 49.436128] pstore: Registered efi_pstore as persistent store backend 6656s 6656s [ 49.447514] systemd[1]: netplan-ovs-cleanup.service - OpenVSwitch configuration for cleanup was skipped because of an unmet condition check (ConditionFileIsExecutable=/usr/bin/ovs-vsctl). 6656s [ 49.582481] systemd[1]: systemd-fsck-root.service - File System Check on Root Device was skipped because of an unmet condition check (ConditionPathExists=!/run/initramfs/fsck-root). 6656s [ 49.959162] systemd[1]: Starting systemd-journald.service - Journal Service... 6656s Starting [0;1;39msystemd-journald.service[0m - Journal Service... 6656s [ 50.170867] systemd[1]: Starting systemd-modules-load.service - Load Kernel Modules... 6656s Starting [0;1;39msystemd-modules-load.service[0m - Load Kernel Modules... 6656s [ 50.386247] systemd[1]: systemd-pcrmachine.service - TPM2 PCR Machine ID Measurement was skipped because of an unmet condition check (ConditionSecurity=measured-uki). 6656s [ 50.567135] systemd[1]: Starting systemd-remount-fs.service - Remount Root and Kernel File Systems... 6656s Starting [0;1;39msystemd-remount-fs.servic?[0munt Root and Kernel File Systems... 6656s [ 50.714103] systemd[1]: systemd-tpm2-setup-early.service - TPM2 SRK Setup (Early) was skipped because of an unmet condition check (ConditionSecurity=measured-uki). 6656s [ 51.274875] systemd[1]: Starting systemd-udev-trigger.service - Coldplug All udev Devices... 6656s Starting [0;1;39msystemd-udev-trigger.service[0m - Coldplug All udev Devices... 6656s [ 51.587284] systemd-journald[221]: Collecting audit messages is disabled. 6656s [ 51.802650] systemd[1]: Mounted dev-hugepages.mount - Huge Pages File System. 6656s [[0;32m OK [0m] Mounted [0;1;39mdev-hugepages.mount[0m - Huge Pages File System. 6656s [ 51.945755] systemd[1]: Mounted dev-mqueue.mount - POSIX Message Queue File System. 6656s [[0;32m OK [0m] Mounted [0;1;39mdev-mqueue.mount[0m - POSIX Message Queue File System. 6656s [ 52.055942] systemd[1]: Mounted sys-kernel-debug.mount - Kernel Debug File System. 6656s [[0;32m OK [0m] Mounted [0;1;39msys-kernel-debug.mount[0m - Kernel Debug File System.[ 52.124919] EXT4-fs (sda1): re-mounted d6a9ac11-aabc-4133-bcca-2073e97f7a95 r/w. Quota mode: none. 6656s 6656s [ 52.225483] systemd[1]: Mounted sys-kernel-tracing.mount - Kernel Trace File System. 6656s [[0;32m OK [0m] Mounted [0;1;39msys-kernel-tracing.mount[0m - Kernel Trace File System. 6656s [ 52.480428] systemd[1]: Finished keyboard-setup.service - Set the console keyboard layout. 6656s [[0;32m OK [0m] Finished [0;1;39mkeyboard-setup.service[0m - Set the console keyboard layout. 6656s [ 52.637759] systemd[1]: Finished kmod-static-nodes.service - Create List of Static Device Nodes. 6656s [[0;32m OK [0m] Finished [0;1;39mkmod-static-nodes.service[0m?Create List of Static Device Nodes. 6656s [ 52.791833] systemd[1]: modprobe@configfs.service: Deactivated successfully. 6656s [ 52.846733] systemd[1]: Finished modprobe@configfs.service - Load Kernel Module configfs. 6656s [[0;32m OK [0m] Finished [0;1;39mmodprobe@configfs.service[0m - Load Kernel Module configfs. 6656s [ 52.968436] systemd[1]: modprobe@dm_mod.service: Deactivated successfully. 6656s [ 53.053014] systemd[1]: Finished modprobe@dm_mod.service - Load Kernel Module dm_mod. 6656s [[0;32m OK [0m] Finished [0;1;39mmodprobe@dm_mod.service[0m - Load Kernel Module dm_mod. 6656s [ 53.180951] systemd[1]: modprobe@drm.service: Deactivated successfully. 6656s [ 53.277323] systemd[1]: Finished modprobe@drm.service - Load Kernel Module drm. 6656s [[0;32m OK [0m] Finished [0;1;39mmodprobe@drm.service[0m - Load Kernel Module drm. 6656s [ 53.440450] systemd[1]: Started systemd-journald.service - Journal Service. 6656s [[0;32m OK [0m] Started [0;1;39msystemd-journald.service[0m - Journal Service. 6656s [[0;32m OK [0m] Finished [0;1;39mmodprobe@efi_pstore.service[0m - Load Kernel Module efi_pstore. 6656s [[0;32m OK [0m] Finished [0;1;39mmodprobe@fuse.service[0m - Load Kernel Module fuse. 6656s [[0;32m OK [0m] Finished [0;1;39mmodprobe@loop.service[0m - Load Kernel Module loop. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-modules-load.service[0m - Load Kernel Modules. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-remount-fs.servic?[0mmount Root and Kernel File Systems. 6656s Mounting [0;1;39msys-fs-fuse-connections.mount[0m - FUSE Control File System... 6656s Mounting [0;1;39msys-kernel-config.mount[0m - Kernel Configuration File System... 6656s Starting [0;1;39mmultipathd.service[0m - Devi?pper Multipath Device Controller... 6656s Starting [0;1;39msystemd-journal-flush.ser?[0msh Journal to Persistent Storage... 6656s Starting [0;1;39msystemd-random-seed.service[0m - Load/Save OS Random Seed... 6656s Starting [0;1;39msystemd-sysctl.service[0m - Apply Kernel Variables... 6656s Starting [0;1;39msystemd-tmpfiles-setup-de?[0m Device Nodes in /dev gracefully... 6656s [ 58.158714] systemd-journald[221]: Received client request to flush runtime journal. 6656s [ 58.313178] systemd-journald[221]: File /var/log/journal/cae7275c5b494709895988aa2f7493b6/system.journal corrupted or uncleanly shut down, renaming and replacing. 6656s [[0;32m OK [0m] Mounted [0;1;39msys-fs-fuse-connections.mount[0m - FUSE Control File System. 6656s [[0;32m OK [0m] Mounted [0;1;39msys-kernel-config.mount[0m - Kernel Configuration File System. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-sysctl.service[0m - Apply Kernel Variables. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-journal-flush.ser?[0mlush Journal to Persistent Storage. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-tmpfiles-setup-de?[0mic Device Nodes in /dev gracefully. 6656s Starting [0;1;39msystemd-tmpfiles-setup-de?[0meate Static Device Nodes in /dev... 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-random-seed.service[0m - Load/Save OS Random Seed. 6656s [[0;32m OK [0m] Started [0;1;39mmultipathd.service[0m - Devic?Mapper Multipath Device Controller. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-tmpfiles-setup-de?[0mCreate Static Device Nodes in /dev. 6656s [[0;32m OK [0m] Reached target [0;1;39mlocal-fs-pre.target[0m?Preparation for Local File Systems. 6656s Starting [0;1;39msystemd-udevd.service[0m - R?ager for Device Events and Files... 6656s [[0m[0;31m* [0m] (1 of 5) Job dev-disk-by\x2dlabel-B?ice/start running (22s / 1min 30s) 6656s M[K[[0;32m OK [0m] Started [0;1;39msystemd-udevd.service[0m - Ru?anager for Device Events and Files. 6656s [K[[0;1;31m*[0m[0;31m* [0m] (1 of 4) Job dev-disk-by\x2dlabel-B?ice/start running (24s / 1min 30s) 6656s M[K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 4) Job dev-disk-by\x2dlabel-B?ice/start running (25s / 1min 30s) 6656s M[K[[0;32m OK [0m] Finished [0;1;39msystemd-udev-trigger.service[0m - Coldplug All udev Devices. 6656s [K[[0;32m OK [0m] Started [0;1;39msystemd-ask-password-conso?[0mequests to Console Directory Watch. 6656s [[0;32m OK [0m] Reached target [0;1;39mcryptsetup.target[0m - Local Encrypted Volumes. 6656s [ [0;31m*[0;1;31m*[0m[0;31m* [0m] (2 of 3) Job dev-disk-by\x2dlabel-U?ice/start running (28s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (2 of 3) Job dev-disk-by\x2dlabel-U?ice/start running (28s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m*[0m] (2 of 3) Job dev-disk-by\x2dlabel-U?ice/start running (29s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m] (3 of 3) Job dev-ttyAMA0.device/start running (29s / 1min 30s) 6656s M[K[ [0;31m*[0m] (3 of 3) Job dev-ttyAMA0.device/start running (30s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m] (3 of 3) Job dev-ttyAMA0.device/start running (30s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m*[0m] (1 of 3) Job dev-disk-by\x2dlabel-B?ice/start running (31s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 3) Job dev-disk-by\x2dlabel-B?ice/start running (31s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 3) Job dev-disk-by\x2dlabel-B?ice/start running (31s / 1min 30s) 6656s M[K[[0;32m OK [0m] Found device [0;1;39mdev-ttyAMA0.device[0m - /dev/ttyAMA0. 6656s [K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (34s / 1min 30s) 6656s M[K[[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (35s / 1min 30s) 6656s M[K[[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (35s / 1min 30s) 6656s M[K[[0;1;31m*[0m[0;31m* [0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (36s / 1min 30s) 6656s M[K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (36s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (37s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (37s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m*[0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (37s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (38s / 1min 30s) 6656s M[K[ [0;31m*[0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (38s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (39s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m*[0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (39s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (40s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (40s / 1min 30s) 6656s M[K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (41s / 1min 30s) 6656s M[K[[0;1;31m*[0m[0;31m* [0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (41s / 1min 30s) 6656s M[K[[0m[0;31m* [0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (42s / 1min 30s) 6656s M[K[[0;1;31m*[0m[0;31m* [0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (42s / 1min 30s) 6656s M[K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (43s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (43s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (44s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m*[0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (44s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (45s / 1min 30s) 6656s M[K[ [0;31m*[0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (45s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (46s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m*[0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (46s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (47s / 1min 30s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (47s / 1min 30s) 6656s M[K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (48s / 1min 30s) 6656s M[K[[0;1;31m*[0m[0;31m* [0m] (2 of 2) Job dev-disk-by\x2dlabel-U?ice/start running (48s / 1min 30s) 6656s M[K[[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (49s / 1min 30s) 6656s M[K[[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (50s / 1min 30s) 6656s M[K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job dev-disk-by\x2dlabel-B?ice/start running (50s / 1min 30s) 6656s M[K[[0;32m OK [0m] Found device [0;1;39mdev-disk-by\x2dlabel-UEFI.device[0m - QEMU_HARDDISK UEFI. 6656s [K[[0;32m OK [0m] Found device [0;1;39mdev-disk-by\x2dlabel-BOOT.device[0m - QEMU_HARDDISK BOOT. 6656s Starting [0;1;39msystemd-fsck@dev-disk-by\?[0mCheck on /dev/disk/by-label/BOOT... 6656s Starting [0;1;39msystemd-fsck@dev-disk-by\?[0mCheck on /dev/disk/by-label/UEFI... 6656s [[0;32m OK [0m] Started [0;1;39msystemd-fsckd.service[0m - Fi?stem Check Daemon to report status. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-fsck@dev-disk-by\?[0mm Check on /dev/disk/by-label/BOOT. 6656s Checking in progress on 1 disk (0.0% complete) Mounting [0;1;39mboot.mount[0m - /boot... 6656s Checking in progress on 0 disks (100.0% complete)[[0;32m OK [0m] Mounted [0;1;39mboot.mount[0m - /boot. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-fsck@dev-disk-by\?[0mm Check on /dev/disk/by-label/UEFI. 6656s Mounting [0;1;39mboot-efi.mount[0m - /boot/efi... 6656s [[0;32m OK [0m] Mounted [0;1;39mboot-efi.mount[0m - /boot/efi. 6656s [[0;32m OK [0m] Reached target [0;1;39mlocal-fs.target[0m - Local File Systems. 6656s [[0;32m OK [0m] Listening on [0;1;39msystemd-sysext.socket[0m?tension Image Management (Varlink). 6656s Starting [0;1;39mapparmor.service[0m - Load AppArmor profiles... 6656s Starting [0;1;39mconsole-setup.service[0m - Set console font and keymap... 6656s Starting [0;1;39mplymouth-read-write.servi?[0mymouth To Write Out Runtime Data... 6656s Starting [0;1;39msystemd-binfmt.service[0m - Set Up Additional Binary Formats... 6656s Starting [0;1;39msystemd-tmpfiles-setup.se?[0me Volatile Files and Directories... 6656s Starting [0;1;39mufw.service[0m - Uncomplicated firewall... 6656s [[0;32m OK [0m] Finished [0;1;39mconsole-setup.service[0m - Set console font and keymap. 6656s [[0;32m OK [0m] Finished [0;1;39mplymouth-read-write.servi?[0mPlymouth To Write Out Runtime Data. 6656s Mounting [0;1;39mproc-sys-fs-binfmt_misc.m?[0mcutable File Formats File System... 6656s [[0;32m OK [0m] Finished [0;1;39mufw.service[0m - Uncomplicated firewall. 6656s [[0;32m OK [0m] Reached target [0;1;39mnetwork-pre.target[0m - Preparation for Network. 6656s Starting [0;1;39msystemd-networkd.service[0m - Network Configuration... 6656s [[0;32m OK [0m] Mounted [0;1;39mproc-sys-fs-binfmt_misc.mo?[0mxecutable File Formats File System. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-binfmt.service[0m - Set Up Additional Binary Formats. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-tmpfiles-setup.se?[0mate Volatile Files and Directories. 6656s Starting [0;1;39msystemd-resolved.service[0m - Network Name Resolution... 6656s Starting [0;1;39msystemd-timesyncd.service[0m - Network Time Synchronization... 6656s Starting [0;1;39msystemd-update-utmp.servi?[0mord System Boot/Shutdown in UTMP... 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-update-utmp.servi?[0mecord System Boot/Shutdown in UTMP. 6656s [[0;32m OK [0m] Started [0;1;39msystemd-networkd.service[0m - Network Configuration. 6656s [[0;1;31m*[0m[0;31m* [0m] (2 of 3) Job systemd-resolved.servi?tart running (1min 26s / 2min 41s) 6656s M[K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (2 of 3) Job systemd-resolved.servi?tart running (1min 26s / 2min 41s) 6656s M[K[[0;32m OK [0m] Started [0;1;39msystemd-timesyncd.service[0m - Network Time Synchronization. 6656s [K[[0;32m OK [0m] Reached target [0;1;39mtime-set.target[0m - System Time Set. 6656s [ [0;31m*[0;1;31m*[0m[0;31m* [0m] (2 of 2) Job systemd-resolved.servi?tart running (1min 29s / 2min 41s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job apparmor.service/start running (1min 30s / no limit) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m*[0m] (1 of 2) Job apparmor.service/start running (1min 30s / no limit) 6656s M[K[ [0;31m*[0;1;31m*[0m] (1 of 2) Job apparmor.service/start running (1min 31s / no limit) 6656s M[K[ [0;31m*[0m] (2 of 2) Job systemd-resolved.servi?tart running (1min 31s / 2min 41s) 6656s M[K[ [0;31m*[0;1;31m*[0m] (2 of 2) Job systemd-resolved.servi?tart running (1min 32s / 2min 41s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m*[0m] (2 of 2) Job systemd-resolved.servi?tart running (1min 32s / 2min 41s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job apparmor.service/start running (1min 33s / no limit) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job apparmor.service/start running (1min 33s / no limit) 6656s M[K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (1 of 2) Job apparmor.service/start running (1min 34s / no limit) 6656s M[K[[0;32m OK [0m] Started [0;1;39msystemd-resolved.service[0m - Network Name Resolution. 6656s [K[[0;32m OK [0m] Reached target [0;1;39mnetwork.target[0m - Network. 6656s [[0;32m OK [0m] Reached target [0;1;39mnss-lookup.target[0m - Host and Network Name Lookups. 6656s [[0;32m OK [0m] Finished [0;1;39mapparmor.service[0m - Load AppArmor profiles. 6656s [[0;32m OK [0m] Reached target [0;1;39msysinit.target[0m - System Initialization. 6656s [[0;32m OK [0m] Started [0;1;39mapt-daily.timer[0m - Daily apt download activities. 6656s [[0;32m OK [0m] Started [0;1;39mapt-daily-upgrade.timer[0m - ?y apt upgrade and clean activities. 6656s [[0;32m OK [0m] Started [0;1;39mdpkg-db-backup.timer[0m - Daily dpkg database backup timer. 6656s [[0;32m OK [0m] Started [0;1;39me2scrub_all.timer[0m - Period?Metadata Check for All Filesystems. 6656s [[0;32m OK [0m] Started [0;1;39mfstrim.timer[0m - Discard unused filesystem blocks once a week. 6656s [[0;32m OK [0m] Started [0;1;39mfwupd-refresh.timer[0m - Refresh fwupd metadata regularly. 6656s [[0;32m OK [0m] Started [0;1;39mlogrotate.timer[0m - Daily rotation of log files. 6656s [[0;32m OK [0m] Started [0;1;39mman-db.timer[0m - Daily man-db regeneration. 6656s [[0;32m OK [0m] Started [0;1;39mmotd-news.timer[0m - Message of the Day. 6656s [[0;32m OK [0m] Started [0;1;39msysstat-collect.timer[0m - Ru?y accounting tool every 10 minutes. 6656s [[0;32m OK [0m] Started [0;1;39msysstat-summary.timer[0m - Ge? of yesterday's process accounting. 6656s [[0;32m OK [0m] Started [0;1;39msystemd-tmpfiles-clean.tim?[0my Cleanup of Temporary Directories. 6656s [[0;32m OK [0m] Reached target [0;1;39mpaths.target[0m - Path Units. 6656s [[0;32m OK [0m] Reached target [0;1;39mtimers.target[0m - Timer Units. 6656s [[0;32m OK [0m] Listening on [0;1;39mdbus.socket[0m - D-Bus System Message Bus Socket. 6656s Starting [0;1;39mlxd-installer.socket[0m - He?er to install lxd snap on demand... 6656s [[0;32m OK [0m] Listening on [0;1;39mssh.socket[0m - OpenBSD Secure Shell server socket. 6656s [[0;32m OK [0m] Listening on [0;1;39muuidd.socket[0m - UUID daemon activation socket. 6656s [[0;32m OK [0m] Listening on [0;1;39mlxd-installer.socket[0m ?lper to install lxd snap on demand. 6656s [[0;32m OK [0m] Reached target [0;1;39msockets.target[0m - Socket Units. 6656s [[0;32m OK [0m] Reached target [0;1;39mbasic.target[0m - Basic System. 6656s Starting [0;1;39msystemd-logind.service[0m - User Login Management... 6656s Starting [0;1;39mapport.service[0m - automatic crash report generation... 6656s [[0;32m OK [0m] Started [0;1;39mautopkgtest@ttyS1.service[0m - autopkgtest root shell on ttyS1. 6656s [[0;32m OK [0m] Started [0;1;39mcron.service[0m - Regular background program processing daemon. 6656s Starting [0;1;39mdbus.service[0m - D-Bus System Message Bus... 6656s [[0;32m OK [0m] Started [0;1;39mdmesg.service[0m - Save initial kernel messages after boot. 6656s Starting [0;1;39me2scrub_reap.service[0m - Re?ne ext4 Metadata Check Snapshots... 6656s Starting [0;1;39mgrub-common.service[0m - Record successful boot for GRUB... 6656s Starting [0;1;39mrc-local.service[0m - /etc/rc.local Compatibility... 6656s Starting [0;1;39mrng-tools-debian.service[0m - LSB: rng-tools (Debian variant)... 6656s Starting [0;1;39mrsyslog.service[0m - System Logging Service... 6656s Starting [0;1;39msysstat.service[0m - Resets System Activity Logs... 6656s Starting [0;1;39msystemd-user-sessions.service[0m - Permit User Sessions... 6656s Starting [0;1;39mudisks2.service[0m - Disk Manager... 6656s [[0;32m OK [0m] Started [0;1;39msystemd-logind.service[0m - User Login Management. 6656s [[0;32m OK [0m] Started [0;1;39mdbus.service[0m - D-Bus System Message Bus. 6656s [[0;32m OK [0m] Finished [0;1;39me2scrub_reap.service[0m - Re?line ext4 Metadata Check Snapshots. 6656s [[0;32m OK [0m] Started [0;1;39mrc-local.service[0m - /etc/rc.local Compatibility. 6656s [[0;32m OK [0m] Finished [0;1;39msysstat.service[0m - Resets System Activity Logs. 6656s [[0;32m OK [0m] Finished [0;1;39msystemd-user-sessions.service[0m - Permit User Sessions. 6656s [[0;1;31m*[0m[0;31m* [0m] (4 of 5) Job udisks2.service/start running (2min 5s / 3min 7s) 6656s M[K[[0m[0;31m* [0m] (4 of 5) Job udisks2.service/start running (2min 7s / 3min 7s) 6656s M[K[[0;1;31m*[0m[0;31m* [0m] (4 of 5) Job udisks2.service/start running (2min 7s / 3min 7s) 6656s M[K[[0;31m*[0;1;31m*[0m[0;31m* [0m] (5 of 5) Job rsyslog.service/start running (2min 8s / 3min 7s) 6656s M[K[ [0;31m*[0;1;31m*[0m[0;31m* [0m] (5 of 5) Job rsyslog.service/start running (2min 9s / 3min 7s) 6656s M[K Starting [0;1;39mplymouth-quit-wait.servic?[0md until boot process finishes up... 6656s [K Starting [0;1;39mplymouth-quit.service[0m - Terminate Plymouth Boot Screen... 6656s Starting [0;1;39mssh.service[0m - OpenBSD Secure Shell server... 6656s Starting [0;1;39msystemd-hostnamed.service[0m - Hostname Service... 6656s [[0;32m OK [0m] Started [0;1;39mrng-tools-debian.service[0m - LSB: rng-tools (Debian variant). 6656s [[0;32m OK [0m] Finished [0;1;39mgrub-common.service[0m - Record successful boot for GRUB. 6656s [[0;32m OK [0m] Finished [0;1;39mplymouth-quit-wait.servic?[0mold until boot process finishes up. 6656s [[0;32m OK [0m] Finished [0;1;39mplymouth-quit.service[0m - Terminate Plymouth Boot Screen. 6656s [[0;32m OK [0m] Started [0;1;39mudisks2.service[0m - Disk Manager. 6656s Starting [0;1;39mgrub-initrd-fallback.service[0m - GRUB failed boot detection... 6656s [[0;32m OK [0m] Started [0;1;39mserial-getty@ttyAMA0.service[0m - Serial Getty on ttyAMA0. 6656s Starting [0;1;39msetvtrgb.service[0m - Set console scheme... 6656s 6656s Ubuntu Noble Numbat (development branch) autopkgtest ttyAMA0 6656s 6656s autopkgtest login: 6656s --------------------------------------------------- 6656s ------- nova show 12507a09-43ad-4f24-9c88-96dfad2387ba (adt-noble-arm64-pychopper-20240324-170352-juju-7f2275-prod-proposed-migration-environment-2) ------ 6656s +--------------------------------------+---------------------------------------------------------------------------------------------+ 6656s | Property | Value | 6656s +--------------------------------------+---------------------------------------------------------------------------------------------+ 6656s | OS-DCF:diskConfig | MANUAL | 6656s | OS-EXT-AZ:availability_zone | nova | 6656s | OS-EXT-SRV-ATTR:host | swirlix07 | 6656s | OS-EXT-SRV-ATTR:hypervisor_hostname | swirlix07.bos02.scalingstack | 6656s | OS-EXT-SRV-ATTR:instance_name | instance-0365d4aa | 6656s | OS-EXT-STS:power_state | 1 | 6656s | OS-EXT-STS:task_state | - | 6656s | OS-EXT-STS:vm_state | active | 6656s | OS-SRV-USG:launched_at | 2024-03-24T17:43:18.000000 | 6656s | OS-SRV-USG:terminated_at | - | 6656s | accessIPv4 | | 6656s | accessIPv6 | | 6656s | config_drive | | 6656s | created | 2024-03-24T17:37:19Z | 6656s | flavor | autopkgtest (aea8bb59-2c51-4a96-9fea-89fe8bfe1807) | 6656s | hostId | 73d0fec20f398c434739bcacc94dbc88ec765215f8702f9b4af8abb3 | 6656s | id | 12507a09-43ad-4f24-9c88-96dfad2387ba | 6656s | image | adt/ubuntu-noble-arm64-server-20240324.img (86f9118c-691d-4fd3-ac71-bf5396ee0d8a) | 6656s | key_name | testbed-juju-7f2275-prod-proposed-migration-environment-2 | 6656s | metadata | {} | 6656s | name | adt-noble-arm64-pychopper-20240324-170352-juju-7f2275-prod-proposed-migration-environment-2 | 6656s | net_prod-proposed-migration network | 10.44.124.120 | 6656s | os-extended-volumes:volumes_attached | [] | 6656s | progress | 0 | 6656s | security_groups | autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-arm64-28.secgroup | 6656s | status | ACTIVE | 6656s | tenant_id | d3e6dd4ab017451f9860efb1b8e773cb | 6656s | updated | 2024-03-24T18:14:42Z | 6656s | user_id | a3b9eba5678e46e8a626d2e0a3669331 | 6656s +--------------------------------------+---------------------------------------------------------------------------------------------+ 6656s --------------------------------------------------- 6656s 6758s Creating nova instance adt-noble-arm64-pychopper-20240324-170352-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240324.img (UUID 86f9118c-691d-4fd3-ac71-bf5396ee0d8a)... 6758s Creating nova instance adt-noble-arm64-pychopper-20240324-170352-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240324.img (UUID 86f9118c-691d-4fd3-ac71-bf5396ee0d8a)... 6760s autopkgtest [19:12:52]: ERROR: testbed failure: timed out on command "env DEBIAN_FRONTEND=noninteractive APT_LISTBUGS_FRONTEND=none APT_LISTCHANGES_FRONTEND=none /bin/sh -ec /usr/bin/eatmydata apt-get install --assume-yes /tmp/autopkgtest.7Igcyq/2-autopkgtest-satdep.deb -o APT::Status-Fd=3 -o APT::Install-Recommends=false -o Dpkg::Options::=--force-confnew -o Debug::pkgProblemResolver=true 3>&2 2>&1" (kind: install)