0s autopkgtest [21:41:21]: starting date and time: 2024-03-13 21:41:21+0000 0s autopkgtest [21:41:21]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:41:21]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.8c2bbd1g/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:h5py,src:hdf5,src:openmpi,src:openssl,src:pmix --apt-upgrade mcaller --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=h5py/3.10.0-1ubuntu2 hdf5/1.10.10+repack-3.1ubuntu2 openmpi/4.1.6-5.1ubuntu3 openssl/3.0.13-0ubuntu1 pmix/5.0.1-4.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-arm64-16.secgroup --name adt-noble-arm64-mcaller-20240313-214121-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 138s autopkgtest [21:43:39]: testbed dpkg architecture: arm64 138s autopkgtest [21:43:39]: testbed apt version: 2.7.12 138s autopkgtest [21:43:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup 139s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 140s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [42.3 kB] 140s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [2818 kB] 140s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [450 kB] 140s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [4812 B] 140s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [603 kB] 141s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 141s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [20.3 kB] 141s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 141s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [3218 kB] 141s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 141s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [42.3 kB] 141s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 150s Fetched 7327 kB in 5s (1591 kB/s) 151s Reading package lists... 152s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 154s Reading package lists... 169s Reading package lists... 169s Building dependency tree... 169s Reading state information... 171s Calculating upgrade... 172s The following packages will be REMOVED: 172s libssl3 172s The following NEW packages will be installed: 172s libssl3t64 172s The following packages will be upgraded: 172s console-setup console-setup-linux keyboard-configuration openssl 172s 4 upgraded, 1 newly installed, 1 to remove and 0 not upgraded. 172s Need to get 4955 kB of archives. 172s After this operation, 74.8 kB of additional disk space will be used. 172s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu1 [983 kB] 173s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu1 [1770 kB] 173s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 console-setup-linux all 1.226ubuntu1 [1880 kB] 173s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 console-setup all 1.226ubuntu1 [110 kB] 173s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 keyboard-configuration all 1.226ubuntu1 [212 kB] 174s Preconfiguring packages ... 175s Fetched 4955 kB in 1s (5368 kB/s) 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75867 files and directories currently installed.) 176s Preparing to unpack .../openssl_3.0.13-0ubuntu1_arm64.deb ... 176s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 176s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 176s wget depends on libssl3 (>= 3.0.0). 176s u-boot-tools depends on libssl3 (>= 3.0.0). 176s tnftp depends on libssl3 (>= 3.0.0). 176s tcpdump depends on libssl3 (>= 3.0.0). 176s systemd-resolved depends on libssl3 (>= 3.0.0). 176s systemd depends on libssl3 (>= 3.0.0). 176s sudo depends on libssl3 (>= 3.0.0). 176s sbsigntool depends on libssl3 (>= 3.0.0). 176s rsync depends on libssl3 (>= 3.0.0). 176s python3-cryptography depends on libssl3 (>= 3.0.0). 176s openssh-server depends on libssl3 (>= 3.0.10). 176s openssh-client depends on libssl3 (>= 3.0.10). 176s mtd-utils depends on libssl3 (>= 3.0.0). 176s mokutil depends on libssl3 (>= 3.0.0). 176s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 176s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 176s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 176s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 176s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 176s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 176s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 176s libnvme1 depends on libssl3 (>= 3.0.0). 176s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 176s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 176s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 176s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 176s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 176s kmod depends on libssl3 (>= 3.0.0). 176s dhcpcd-base depends on libssl3 (>= 3.0.0). 176s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 176s 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75867 files and directories currently installed.) 177s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 177s Selecting previously unselected package libssl3t64:arm64. 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75856 files and directories currently installed.) 177s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_arm64.deb ... 177s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu1) ... 177s Preparing to unpack .../console-setup-linux_1.226ubuntu1_all.deb ... 177s Unpacking console-setup-linux (1.226ubuntu1) over (1.223ubuntu2) ... 178s Preparing to unpack .../console-setup_1.226ubuntu1_all.deb ... 178s Unpacking console-setup (1.226ubuntu1) over (1.223ubuntu2) ... 178s Preparing to unpack .../keyboard-configuration_1.226ubuntu1_all.deb ... 178s Unpacking keyboard-configuration (1.226ubuntu1) over (1.223ubuntu2) ... 178s Setting up libssl3t64:arm64 (3.0.13-0ubuntu1) ... 178s Setting up keyboard-configuration (1.226ubuntu1) ... 182s Your console font configuration will be updated the next time your system 182s boots. If you want to update it now, run 'setupcon' from a virtual console. 182s update-initramfs: deferring update (trigger activated) 182s Setting up openssl (3.0.13-0ubuntu1) ... 182s Setting up console-setup-linux (1.226ubuntu1) ... 188s Setting up console-setup (1.226ubuntu1) ... 191s update-initramfs: deferring update (trigger activated) 191s Processing triggers for man-db (2.12.0-3) ... 192s Processing triggers for libc-bin (2.39-0ubuntu2) ... 192s Processing triggers for initramfs-tools (0.142ubuntu20) ... 192s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 192s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 259s System running in EFI mode, skipping. 259s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 259s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 260s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 260s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 260s Reading package lists... 261s Building dependency tree... 261s Reading state information... 262s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 263s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 263s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 263s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 264s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 264s Hit:5 http://ftpmaster.internal/ubuntu noble-backports InRelease 277s Reading package lists... 277s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 277s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 277s W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (main/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (universe/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (restricted/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (multiverse/cnf/Commands-arm64) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 277s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list.d/proposed.list:1 and /etc/apt/sources.list.d/proposed.sources:1 278s Reading package lists... 278s Building dependency tree... 278s Reading state information... 280s Calculating upgrade... 281s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 281s Reading package lists... 282s Building dependency tree... 282s Reading state information... 283s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 283s autopkgtest [21:46:04]: rebooting testbed after setup commands that affected boot 451s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 459s autopkgtest [21:49:00]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 463s autopkgtest [21:49:04]: @@@@@@@@@@@@@@@@@@@@ apt-source mcaller 468s Get:1 http://ftpmaster.internal/ubuntu noble/universe mcaller 1.0.3+git20210624.b415090-3 (dsc) [2372 B] 468s Get:2 http://ftpmaster.internal/ubuntu noble/universe mcaller 1.0.3+git20210624.b415090-3 (tar) [6613 kB] 468s Get:3 http://ftpmaster.internal/ubuntu noble/universe mcaller 1.0.3+git20210624.b415090-3 (diff) [7488 B] 469s gpgv: Signature made Wed Apr 27 22:26:52 2022 UTC 469s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 469s gpgv: issuer "emollier@debian.org" 469s gpgv: Can't check signature: No public key 469s dpkg-source: warning: cannot verify inline signature for ./mcaller_1.0.3+git20210624.b415090-3.dsc: no acceptable signature found 470s autopkgtest [21:49:11]: testing package mcaller version 1.0.3+git20210624.b415090-3 470s autopkgtest [21:49:11]: build not needed 482s autopkgtest [21:49:23]: test run-unit-test: preparing testbed 490s Reading package lists... 490s Building dependency tree... 490s Reading state information... 491s Starting pkgProblemResolver with broken count: 0 492s Starting 2 pkgProblemResolver with broken count: 0 492s Done 493s The following additional packages will be installed: 493s blt fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono 493s fonts-lyx fonts-urw-base35 libaec0 libblas3 libcairo2 libdeflate0 493s libfontconfig1 libfontenc1 libgfortran5 libgomp1 libgraphite2-3 493s libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libhts3 libhtscodecs2 493s libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui 493s liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblzf1 libopenjp2-7 libpixman-1-0 493s libqhull-r8.0 libraqm0 libsharpyuv0 libsz2 libtcl8.6 libtiff6 libtk8.6 493s libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 libxft2 493s libxrender1 libxslt1.1 libxss1 mcaller python-matplotlib-data 493s python3-appdirs python3-biopython python3-brotli python3-cairo 493s python3-contourpy python3-cycler python3-dateutil python3-decorator 493s python3-fonttools python3-freetype python3-fs python3-h5py 493s python3-h5py-serial python3-joblib python3-kiwisolver python3-lxml 493s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 493s python3-packaging python3-pandas python3-pandas-lib python3-pil 493s python3-pil.imagetk python3-pysam python3-reportlab python3-rlpycairo 493s python3-scipy python3-seaborn python3-sklearn python3-sklearn-lib 493s python3-sympy python3-threadpoolctl python3-tk python3-ufolib2 493s python3-unicodedata2 sgml-base tk8.6-blt2.5 unicode-data w3c-sgml-lib 493s x11-common xfonts-encodings xfonts-utils xml-core 493s Suggested packages: 493s blt-demo fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 493s libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 graphmap bwa clustalo 493s clustalw dialign dssp emboss fasttree mafft muscle3 phylip phyml prank 493s probcons python3-mysqldb python3-mmtf python3-rdflib python3-psycopg2 raxml 493s samtools t-coffee wise python-cycler-doc python-h5py-doc python-lxml-doc 493s cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 493s inkscape ipython3 librsvg2-common python3-cairocffi python3-gi-cairo 493s python3-gobject python3-pyqt5 python3-sip python3-tornado 493s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc 493s gfortran python3-dev python3-pytest python-pandas-doc python3-statsmodels 493s python-pil-doc pdf-viewer python3-egenix-mxtexttools python-reportlab-doc 493s rl-accel rl-renderpm python-scipy-doc python3-dap python-sklearn-doc 493s texlive-fonts-extra python-sympy-doc tix python3-tk-dbg sgml-base-doc 493s debhelper 493s Recommended packages: 493s javascript-common nanopolish | poretools python-biopython-doc ncbi-blast+ 493s python3-pytest python3-simplejson python3-psutil python3-bs4 493s python3-cssselect python3-html5lib python3-bottleneck python3-numexpr 493s python3-odf python3-openpyxl python3-tables python3-olefile g++ 493s | c++-compiler python3-patsy isympy-common 494s The following NEW packages will be installed: 494s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core 494s fonts-dejavu-extra fonts-dejavu-mono fonts-lyx fonts-urw-base35 libaec0 494s libblas3 libcairo2 libdeflate0 libfontconfig1 libfontenc1 libgfortran5 494s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 494s libhts3 libhtscodecs2 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 494s libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 liblerc4 494s liblzf1 libopenjp2-7 libpixman-1-0 libqhull-r8.0 libraqm0 libsharpyuv0 494s libsz2 libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 494s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 mcaller 494s python-matplotlib-data python3-appdirs python3-biopython python3-brotli 494s python3-cairo python3-contourpy python3-cycler python3-dateutil 494s python3-decorator python3-fonttools python3-freetype python3-fs python3-h5py 494s python3-h5py-serial python3-joblib python3-kiwisolver python3-lxml 494s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 494s python3-packaging python3-pandas python3-pandas-lib python3-pil 494s python3-pil.imagetk python3-pysam python3-reportlab python3-rlpycairo 494s python3-scipy python3-seaborn python3-sklearn python3-sklearn-lib 494s python3-sympy python3-threadpoolctl python3-tk python3-ufolib2 494s python3-unicodedata2 sgml-base tk8.6-blt2.5 unicode-data w3c-sgml-lib 494s x11-common xfonts-encodings xfonts-utils xml-core 494s 0 upgraded, 98 newly installed, 0 to remove and 0 not upgraded. 494s Need to get 106 MB/106 MB of archives. 494s After this operation, 507 MB of additional disk space will be used. 494s Get:1 /tmp/autopkgtest.sPht3u/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B] 494s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 sgml-base all 1.31 [11.4 kB] 494s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 494s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 495s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 495s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 libfontenc1 arm64 1:1.1.4-1build3 [14.1 kB] 495s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 495s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 495s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-utils arm64 1:7.7+6build2 [93.6 kB] 495s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-urw-base35 all 20200910-8 [11.0 MB] 495s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 495s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 495s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 495s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 495s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 495s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 495s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7 [618 kB] 495s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 blt arm64 2.5.3+dfsg-7 [4826 B] 495s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-extra all 2.37-8 [1947 kB] 496s Get:20 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lyx all 2.4.0~RC3-1 [170 kB] 496s Get:21 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 496s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 496s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 496s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 496s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 496s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 496s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 496s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 496s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 496s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB] 496s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB] 496s Get:32 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 496s Get:33 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-3.1ubuntu2 [1192 kB] 496s Get:34 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-3.1ubuntu2 [55.8 kB] 496s Get:35 http://ftpmaster.internal/ubuntu noble/universe arm64 libhtscodecs2 arm64 1.6.0-1 [78.1 kB] 496s Get:36 http://ftpmaster.internal/ubuntu noble/universe arm64 libhts3 arm64 1.18+ds-1 [422 kB] 496s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libimagequant0 arm64 2.18.0-1 [37.0 kB] 496s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 496s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 496s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 496s Get:41 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 496s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 496s Get:43 http://ftpmaster.internal/ubuntu noble/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1 [27.7 kB] 496s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 liblcms2-2 arm64 2.14-2 [159 kB] 496s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 496s Get:46 http://ftpmaster.internal/ubuntu noble/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 496s Get:47 http://ftpmaster.internal/ubuntu noble/universe arm64 libqhull-r8.0 arm64 2020.2-6 [188 kB] 496s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libraqm0 arm64 0.10.1-1 [14.4 kB] 496s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 496s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 496s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 496s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 496s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpdemux2 arm64 1.3.2-0.4 [12.3 kB] 496s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpmux3 arm64 1.3.2-0.4 [25.0 kB] 496s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libxslt1.1 arm64 1.1.35-1 [161 kB] 496s Get:56 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-joblib all 1.3.2-1 [207 kB] 496s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 python3-numpy arm64 1:1.24.2-2 [4525 kB] 497s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 497s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-scipy arm64 1.11.4-6 [18.6 MB] 498s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-threadpoolctl all 3.1.0-1 [21.3 kB] 498s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-sklearn-lib arm64 1.4.1.post1+dfsg-1 [6663 kB] 498s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-sklearn all 1.4.1.post1+dfsg-1 [2261 kB] 498s Get:63 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 python3-h5py-serial arm64 3.10.0-1ubuntu2 [887 kB] 498s Get:64 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 python3-h5py all 3.10.0-1ubuntu2 [7980 B] 498s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 python3-tk arm64 3.11.5-1 [112 kB] 498s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pil.imagetk arm64 10.2.0-1 [9708 B] 498s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libopenjp2-7 arm64 2.5.0-2 [170 kB] 498s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 python3-pil arm64 10.2.0-1 [477 kB] 498s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 python3-cairo arm64 1.25.1-2 [153 kB] 498s Get:70 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-freetype all 2.4.0-1 [83.1 kB] 499s Get:71 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-rlpycairo all 0.3.0-3 [9130 B] 499s Get:72 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-reportlab all 4.1.0-1 [683 kB] 499s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 xml-core all 0.19 [20.3 kB] 499s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 w3c-sgml-lib all 1.3-3 [280 kB] 499s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-biopython arm64 1.81+dfsg-3 [1664 kB] 499s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] 499s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 python3-dateutil all 2.8.2-3 [79.2 kB] 499s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-contourpy arm64 1.0.7-1build2 [244 kB] 499s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-cycler all 0.11.0-2 [8202 B] 499s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-brotli arm64 1.1.0-2 [345 kB] 499s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 499s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-mpmath all 1.2.1-3 [421 kB] 499s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-sympy all 1.12-7 [3966 kB] 499s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB] 499s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fs all 2.4.16-3 [91.1 kB] 499s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 python3-lxml arm64 5.1.0-1 [2042 kB] 499s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build2 [28.4 kB] 499s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-unicodedata2 arm64 15.1.0+ds-1 [362 kB] 499s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 unicode-data all 15.1.0-1 [8878 kB] 500s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fonttools arm64 4.46.0-1 [1625 kB] 500s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-kiwisolver arm64 1.4.4-1build2 [65.4 kB] 500s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 python3-packaging all 23.2-1 [40.6 kB] 500s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-matplotlib arm64 3.6.3-1ubuntu3 [7291 kB] 500s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pandas-lib arm64 2.1.4+dfsg-4ubuntu2 [7669 kB] 501s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pandas all 2.1.4+dfsg-4ubuntu2 [3042 kB] 501s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-seaborn all 0.13.2-2 [225 kB] 501s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pysam arm64 0.22.0+ds-1 [4399 kB] 501s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 mcaller all 1.0.3+git20210624.b415090-3 [19.3 kB] 503s Fetched 106 MB in 7s (14.8 MB/s) 503s Selecting previously unselected package sgml-base. 504s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75869 files and directories currently installed.) 504s Preparing to unpack .../00-sgml-base_1.31_all.deb ... 504s Unpacking sgml-base (1.31) ... 506s Selecting previously unselected package libtcl8.6:arm64. 506s Preparing to unpack .../01-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 506s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 506s Selecting previously unselected package fonts-dejavu-mono. 506s Preparing to unpack .../02-fonts-dejavu-mono_2.37-8_all.deb ... 506s Unpacking fonts-dejavu-mono (2.37-8) ... 506s Selecting previously unselected package fonts-dejavu-core. 506s Preparing to unpack .../03-fonts-dejavu-core_2.37-8_all.deb ... 506s Unpacking fonts-dejavu-core (2.37-8) ... 506s Selecting previously unselected package libfontenc1:arm64. 506s Preparing to unpack .../04-libfontenc1_1%3a1.1.4-1build3_arm64.deb ... 506s Unpacking libfontenc1:arm64 (1:1.1.4-1build3) ... 506s Selecting previously unselected package x11-common. 506s Preparing to unpack .../05-x11-common_1%3a7.7+23ubuntu2_all.deb ... 506s Unpacking x11-common (1:7.7+23ubuntu2) ... 506s Selecting previously unselected package xfonts-encodings. 506s Preparing to unpack .../06-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 506s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 506s Selecting previously unselected package xfonts-utils. 506s Preparing to unpack .../07-xfonts-utils_1%3a7.7+6build2_arm64.deb ... 506s Unpacking xfonts-utils (1:7.7+6build2) ... 506s Selecting previously unselected package fonts-urw-base35. 506s Preparing to unpack .../08-fonts-urw-base35_20200910-8_all.deb ... 506s Unpacking fonts-urw-base35 (20200910-8) ... 506s Selecting previously unselected package fontconfig-config. 506s Preparing to unpack .../09-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 506s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 506s Selecting previously unselected package libfontconfig1:arm64. 506s Preparing to unpack .../10-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 506s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 507s Selecting previously unselected package libxrender1:arm64. 507s Preparing to unpack .../11-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 507s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 507s Selecting previously unselected package libxft2:arm64. 507s Preparing to unpack .../12-libxft2_2.3.6-1_arm64.deb ... 507s Unpacking libxft2:arm64 (2.3.6-1) ... 507s Selecting previously unselected package libxss1:arm64. 507s Preparing to unpack .../13-libxss1_1%3a1.2.3-1build2_arm64.deb ... 507s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 507s Selecting previously unselected package libtk8.6:arm64. 507s Preparing to unpack .../14-libtk8.6_8.6.13-2_arm64.deb ... 507s Unpacking libtk8.6:arm64 (8.6.13-2) ... 507s Selecting previously unselected package tk8.6-blt2.5. 507s Preparing to unpack .../15-tk8.6-blt2.5_2.5.3+dfsg-7_arm64.deb ... 507s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... 507s Selecting previously unselected package blt. 507s Preparing to unpack .../16-blt_2.5.3+dfsg-7_arm64.deb ... 507s Unpacking blt (2.5.3+dfsg-7) ... 507s Selecting previously unselected package fonts-dejavu-extra. 507s Preparing to unpack .../17-fonts-dejavu-extra_2.37-8_all.deb ... 507s Unpacking fonts-dejavu-extra (2.37-8) ... 507s Selecting previously unselected package fonts-lyx. 507s Preparing to unpack .../18-fonts-lyx_2.4.0~RC3-1_all.deb ... 507s Unpacking fonts-lyx (2.4.0~RC3-1) ... 508s Selecting previously unselected package libaec0:arm64. 508s Preparing to unpack .../19-libaec0_1.1.2-1_arm64.deb ... 508s Unpacking libaec0:arm64 (1.1.2-1) ... 508s Selecting previously unselected package libblas3:arm64. 508s Preparing to unpack .../20-libblas3_3.12.0-3_arm64.deb ... 508s Unpacking libblas3:arm64 (3.12.0-3) ... 508s Selecting previously unselected package libpixman-1-0:arm64. 508s Preparing to unpack .../21-libpixman-1-0_0.42.2-1_arm64.deb ... 508s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 508s Selecting previously unselected package libxcb-render0:arm64. 508s Preparing to unpack .../22-libxcb-render0_1.15-1_arm64.deb ... 508s Unpacking libxcb-render0:arm64 (1.15-1) ... 508s Selecting previously unselected package libxcb-shm0:arm64. 508s Preparing to unpack .../23-libxcb-shm0_1.15-1_arm64.deb ... 508s Unpacking libxcb-shm0:arm64 (1.15-1) ... 508s Selecting previously unselected package libcairo2:arm64. 508s Preparing to unpack .../24-libcairo2_1.18.0-1_arm64.deb ... 508s Unpacking libcairo2:arm64 (1.18.0-1) ... 508s Selecting previously unselected package libdeflate0:arm64. 508s Preparing to unpack .../25-libdeflate0_1.19-1_arm64.deb ... 508s Unpacking libdeflate0:arm64 (1.19-1) ... 508s Selecting previously unselected package libgfortran5:arm64. 508s Preparing to unpack .../26-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 508s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 508s Selecting previously unselected package libgomp1:arm64. 508s Preparing to unpack .../27-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 508s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 508s Selecting previously unselected package libgraphite2-3:arm64. 508s Preparing to unpack .../28-libgraphite2-3_1.3.14-2_arm64.deb ... 508s Unpacking libgraphite2-3:arm64 (1.3.14-2) ... 509s Selecting previously unselected package libharfbuzz0b:arm64. 509s Preparing to unpack .../29-libharfbuzz0b_8.3.0-2_arm64.deb ... 509s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ... 509s Selecting previously unselected package libsz2:arm64. 509s Preparing to unpack .../30-libsz2_1.1.2-1_arm64.deb ... 509s Unpacking libsz2:arm64 (1.1.2-1) ... 509s Selecting previously unselected package libhdf5-103-1t64:arm64. 509s Preparing to unpack .../31-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu2_arm64.deb ... 509s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-3.1ubuntu2) ... 509s Selecting previously unselected package libhdf5-hl-100t64:arm64. 509s Preparing to unpack .../32-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu2_arm64.deb ... 509s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-3.1ubuntu2) ... 509s Selecting previously unselected package libhtscodecs2:arm64. 509s Preparing to unpack .../33-libhtscodecs2_1.6.0-1_arm64.deb ... 509s Unpacking libhtscodecs2:arm64 (1.6.0-1) ... 509s Selecting previously unselected package libhts3:arm64. 509s Preparing to unpack .../34-libhts3_1.18+ds-1_arm64.deb ... 509s Unpacking libhts3:arm64 (1.18+ds-1) ... 509s Selecting previously unselected package libimagequant0:arm64. 509s Preparing to unpack .../35-libimagequant0_2.18.0-1_arm64.deb ... 509s Unpacking libimagequant0:arm64 (2.18.0-1) ... 509s Selecting previously unselected package libjpeg-turbo8:arm64. 509s Preparing to unpack .../36-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 509s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 509s Selecting previously unselected package libjpeg8:arm64. 509s Preparing to unpack .../37-libjpeg8_8c-2ubuntu11_arm64.deb ... 509s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 510s Selecting previously unselected package libjs-jquery. 510s Preparing to unpack .../38-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 510s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 510s Selecting previously unselected package libjs-jquery-ui. 510s Preparing to unpack .../39-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 510s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 510s Selecting previously unselected package liblapack3:arm64. 510s Preparing to unpack .../40-liblapack3_3.12.0-3_arm64.deb ... 510s Unpacking liblapack3:arm64 (3.12.0-3) ... 510s Selecting previously unselected package liblbfgsb0:arm64. 510s Preparing to unpack .../41-liblbfgsb0_3.0+dfsg.4-1_arm64.deb ... 510s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1) ... 510s Selecting previously unselected package liblcms2-2:arm64. 510s Preparing to unpack .../42-liblcms2-2_2.14-2_arm64.deb ... 510s Unpacking liblcms2-2:arm64 (2.14-2) ... 510s Selecting previously unselected package liblerc4:arm64. 510s Preparing to unpack .../43-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 510s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 511s Selecting previously unselected package liblzf1:arm64. 511s Preparing to unpack .../44-liblzf1_3.6-4_arm64.deb ... 511s Unpacking liblzf1:arm64 (3.6-4) ... 511s Selecting previously unselected package libqhull-r8.0:arm64. 511s Preparing to unpack .../45-libqhull-r8.0_2020.2-6_arm64.deb ... 511s Unpacking libqhull-r8.0:arm64 (2020.2-6) ... 511s Selecting previously unselected package libraqm0:arm64. 511s Preparing to unpack .../46-libraqm0_0.10.1-1_arm64.deb ... 511s Unpacking libraqm0:arm64 (0.10.1-1) ... 511s Selecting previously unselected package libsharpyuv0:arm64. 511s Preparing to unpack .../47-libsharpyuv0_1.3.2-0.4_arm64.deb ... 511s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 511s Selecting previously unselected package libjbig0:arm64. 511s Preparing to unpack .../48-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 511s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 511s Selecting previously unselected package libwebp7:arm64. 511s Preparing to unpack .../49-libwebp7_1.3.2-0.4_arm64.deb ... 511s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 511s Selecting previously unselected package libtiff6:arm64. 511s Preparing to unpack .../50-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 511s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 511s Selecting previously unselected package libwebpdemux2:arm64. 511s Preparing to unpack .../51-libwebpdemux2_1.3.2-0.4_arm64.deb ... 511s Unpacking libwebpdemux2:arm64 (1.3.2-0.4) ... 511s Selecting previously unselected package libwebpmux3:arm64. 511s Preparing to unpack .../52-libwebpmux3_1.3.2-0.4_arm64.deb ... 511s Unpacking libwebpmux3:arm64 (1.3.2-0.4) ... 511s Selecting previously unselected package libxslt1.1:arm64. 511s Preparing to unpack .../53-libxslt1.1_1.1.35-1_arm64.deb ... 511s Unpacking libxslt1.1:arm64 (1.1.35-1) ... 511s Selecting previously unselected package python3-joblib. 511s Preparing to unpack .../54-python3-joblib_1.3.2-1_all.deb ... 511s Unpacking python3-joblib (1.3.2-1) ... 512s Selecting previously unselected package python3-numpy. 512s Preparing to unpack .../55-python3-numpy_1%3a1.24.2-2_arm64.deb ... 512s Unpacking python3-numpy (1:1.24.2-2) ... 513s Selecting previously unselected package python3-decorator. 513s Preparing to unpack .../56-python3-decorator_5.1.1-5_all.deb ... 513s Unpacking python3-decorator (5.1.1-5) ... 513s Selecting previously unselected package python3-scipy. 513s Preparing to unpack .../57-python3-scipy_1.11.4-6_arm64.deb ... 513s Unpacking python3-scipy (1.11.4-6) ... 516s Selecting previously unselected package python3-threadpoolctl. 516s Preparing to unpack .../58-python3-threadpoolctl_3.1.0-1_all.deb ... 516s Unpacking python3-threadpoolctl (3.1.0-1) ... 516s Selecting previously unselected package python3-sklearn-lib:arm64. 516s Preparing to unpack .../59-python3-sklearn-lib_1.4.1.post1+dfsg-1_arm64.deb ... 516s Unpacking python3-sklearn-lib:arm64 (1.4.1.post1+dfsg-1) ... 517s Selecting previously unselected package python3-sklearn. 517s Preparing to unpack .../60-python3-sklearn_1.4.1.post1+dfsg-1_all.deb ... 517s Unpacking python3-sklearn (1.4.1.post1+dfsg-1) ... 518s Selecting previously unselected package python3-h5py-serial. 518s Preparing to unpack .../61-python3-h5py-serial_3.10.0-1ubuntu2_arm64.deb ... 518s Unpacking python3-h5py-serial (3.10.0-1ubuntu2) ... 518s Selecting previously unselected package python3-h5py. 518s Preparing to unpack .../62-python3-h5py_3.10.0-1ubuntu2_all.deb ... 518s Unpacking python3-h5py (3.10.0-1ubuntu2) ... 518s Selecting previously unselected package python3-tk:arm64. 518s Preparing to unpack .../63-python3-tk_3.11.5-1_arm64.deb ... 518s Unpacking python3-tk:arm64 (3.11.5-1) ... 518s Selecting previously unselected package python3-pil.imagetk:arm64. 518s Preparing to unpack .../64-python3-pil.imagetk_10.2.0-1_arm64.deb ... 518s Unpacking python3-pil.imagetk:arm64 (10.2.0-1) ... 518s Selecting previously unselected package libopenjp2-7:arm64. 518s Preparing to unpack .../65-libopenjp2-7_2.5.0-2_arm64.deb ... 518s Unpacking libopenjp2-7:arm64 (2.5.0-2) ... 518s Selecting previously unselected package python3-pil:arm64. 518s Preparing to unpack .../66-python3-pil_10.2.0-1_arm64.deb ... 518s Unpacking python3-pil:arm64 (10.2.0-1) ... 519s Selecting previously unselected package python3-cairo. 519s Preparing to unpack .../67-python3-cairo_1.25.1-2_arm64.deb ... 519s Unpacking python3-cairo (1.25.1-2) ... 519s Selecting previously unselected package python3-freetype. 519s Preparing to unpack .../68-python3-freetype_2.4.0-1_all.deb ... 519s Unpacking python3-freetype (2.4.0-1) ... 519s Selecting previously unselected package python3-rlpycairo. 519s Preparing to unpack .../69-python3-rlpycairo_0.3.0-3_all.deb ... 519s Unpacking python3-rlpycairo (0.3.0-3) ... 519s Selecting previously unselected package python3-reportlab. 519s Preparing to unpack .../70-python3-reportlab_4.1.0-1_all.deb ... 519s Unpacking python3-reportlab (4.1.0-1) ... 519s Selecting previously unselected package xml-core. 519s Preparing to unpack .../71-xml-core_0.19_all.deb ... 519s Unpacking xml-core (0.19) ... 519s Selecting previously unselected package w3c-sgml-lib. 519s Preparing to unpack .../72-w3c-sgml-lib_1.3-3_all.deb ... 519s Unpacking w3c-sgml-lib (1.3-3) ... 520s Selecting previously unselected package python3-biopython. 520s Preparing to unpack .../73-python3-biopython_1.81+dfsg-3_arm64.deb ... 520s Unpacking python3-biopython (1.81+dfsg-3) ... 522s Selecting previously unselected package python-matplotlib-data. 522s Preparing to unpack .../74-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ... 522s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ... 522s Selecting previously unselected package python3-dateutil. 522s Preparing to unpack .../75-python3-dateutil_2.8.2-3_all.deb ... 522s Unpacking python3-dateutil (2.8.2-3) ... 522s Selecting previously unselected package python3-contourpy. 522s Preparing to unpack .../76-python3-contourpy_1.0.7-1build2_arm64.deb ... 522s Unpacking python3-contourpy (1.0.7-1build2) ... 522s Selecting previously unselected package python3-cycler. 522s Preparing to unpack .../77-python3-cycler_0.11.0-2_all.deb ... 522s Unpacking python3-cycler (0.11.0-2) ... 522s Selecting previously unselected package python3-brotli. 522s Preparing to unpack .../78-python3-brotli_1.1.0-2_arm64.deb ... 522s Unpacking python3-brotli (1.1.0-2) ... 522s Selecting previously unselected package python3-ufolib2. 522s Preparing to unpack .../79-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 522s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 522s Selecting previously unselected package python3-mpmath. 522s Preparing to unpack .../80-python3-mpmath_1.2.1-3_all.deb ... 522s Unpacking python3-mpmath (1.2.1-3) ... 522s Selecting previously unselected package python3-sympy. 522s Preparing to unpack .../81-python3-sympy_1.12-7_all.deb ... 522s Unpacking python3-sympy (1.12-7) ... 523s Selecting previously unselected package python3-appdirs. 523s Preparing to unpack .../82-python3-appdirs_1.4.4-4_all.deb ... 523s Unpacking python3-appdirs (1.4.4-4) ... 523s Selecting previously unselected package python3-fs. 523s Preparing to unpack .../83-python3-fs_2.4.16-3_all.deb ... 523s Unpacking python3-fs (2.4.16-3) ... 523s Selecting previously unselected package python3-lxml:arm64. 523s Preparing to unpack .../84-python3-lxml_5.1.0-1_arm64.deb ... 523s Unpacking python3-lxml:arm64 (5.1.0-1) ... 524s Selecting previously unselected package python3-lz4. 524s Preparing to unpack .../85-python3-lz4_4.0.2+dfsg-1build2_arm64.deb ... 524s Unpacking python3-lz4 (4.0.2+dfsg-1build2) ... 524s Selecting previously unselected package python3-unicodedata2. 524s Preparing to unpack .../86-python3-unicodedata2_15.1.0+ds-1_arm64.deb ... 524s Unpacking python3-unicodedata2 (15.1.0+ds-1) ... 524s Selecting previously unselected package unicode-data. 524s Preparing to unpack .../87-unicode-data_15.1.0-1_all.deb ... 524s Unpacking unicode-data (15.1.0-1) ... 525s Selecting previously unselected package python3-fonttools. 525s Preparing to unpack .../88-python3-fonttools_4.46.0-1_arm64.deb ... 525s Unpacking python3-fonttools (4.46.0-1) ... 526s Selecting previously unselected package python3-kiwisolver. 526s Preparing to unpack .../89-python3-kiwisolver_1.4.4-1build2_arm64.deb ... 526s Unpacking python3-kiwisolver (1.4.4-1build2) ... 526s Selecting previously unselected package python3-packaging. 526s Preparing to unpack .../90-python3-packaging_23.2-1_all.deb ... 526s Unpacking python3-packaging (23.2-1) ... 526s Selecting previously unselected package python3-matplotlib. 526s Preparing to unpack .../91-python3-matplotlib_3.6.3-1ubuntu3_arm64.deb ... 526s Unpacking python3-matplotlib (3.6.3-1ubuntu3) ... 527s Selecting previously unselected package python3-pandas-lib:arm64. 527s Preparing to unpack .../92-python3-pandas-lib_2.1.4+dfsg-4ubuntu2_arm64.deb ... 527s Unpacking python3-pandas-lib:arm64 (2.1.4+dfsg-4ubuntu2) ... 528s Selecting previously unselected package python3-pandas. 528s Preparing to unpack .../93-python3-pandas_2.1.4+dfsg-4ubuntu2_all.deb ... 528s Unpacking python3-pandas (2.1.4+dfsg-4ubuntu2) ... 529s Selecting previously unselected package python3-seaborn. 529s Preparing to unpack .../94-python3-seaborn_0.13.2-2_all.deb ... 529s Unpacking python3-seaborn (0.13.2-2) ... 529s Selecting previously unselected package python3-pysam. 529s Preparing to unpack .../95-python3-pysam_0.22.0+ds-1_arm64.deb ... 529s Unpacking python3-pysam (0.22.0+ds-1) ... 530s Selecting previously unselected package mcaller. 530s Preparing to unpack .../96-mcaller_1.0.3+git20210624.b415090-3_all.deb ... 531s Unpacking mcaller (1.0.3+git20210624.b415090-3) ... 531s Selecting previously unselected package autopkgtest-satdep. 531s Preparing to unpack .../97-1-autopkgtest-satdep.deb ... 531s Unpacking autopkgtest-satdep (0) ... 531s Setting up libhtscodecs2:arm64 (1.6.0-1) ... 531s Setting up libgraphite2-3:arm64 (1.3.14-2) ... 531s Setting up liblcms2-2:arm64 (2.14-2) ... 531s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 531s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 531s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 531s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 531s Setting up python3-joblib (1.3.2-1) ... 532s Setting up python3-lz4 (4.0.2+dfsg-1build2) ... 532s Setting up libxcb-render0:arm64 (1.15-1) ... 532s Setting up python3-unicodedata2 (15.1.0+ds-1) ... 532s Setting up fonts-lyx (2.4.0~RC3-1) ... 532s Setting up python3-threadpoolctl (3.1.0-1) ... 533s Setting up x11-common (1:7.7+23ubuntu2) ... 534s Setting up libdeflate0:arm64 (1.19-1) ... 534s Setting up libqhull-r8.0:arm64 (2020.2-6) ... 535s Setting up libxcb-shm0:arm64 (1.15-1) ... 535s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 535s Setting up python3-freetype (2.4.0-1) ... 535s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 535s Setting up libaec0:arm64 (1.1.2-1) ... 535s Setting up unicode-data (15.1.0-1) ... 535s Setting up python3-decorator (5.1.1-5) ... 536s Setting up libfontenc1:arm64 (1:1.1.4-1build3) ... 536s Setting up libblas3:arm64 (3.12.0-3) ... 536s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 536s Setting up python3-packaging (23.2-1) ... 536s Setting up python3-brotli (1.1.0-2) ... 537s Setting up liblzf1:arm64 (3.6-4) ... 537s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 537s Setting up python3-cycler (0.11.0-2) ... 537s Setting up libimagequant0:arm64 (2.18.0-1) ... 537s Setting up fonts-dejavu-mono (2.37-8) ... 537s Setting up python3-kiwisolver (1.4.4-1build2) ... 538s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 538s Setting up fonts-dejavu-core (2.37-8) ... 538s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 538s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 538s Setting up libwebp7:arm64 (1.3.2-0.4) ... 538s Setting up fonts-dejavu-extra (2.37-8) ... 538s Setting up libxslt1.1:arm64 (1.1.35-1) ... 538s Setting up libopenjp2-7:arm64 (2.5.0-2) ... 538s Setting up libharfbuzz0b:arm64 (8.3.0-2) ... 538s Setting up python3-dateutil (2.8.2-3) ... 539s Setting up sgml-base (1.31) ... 539s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 539s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 539s Setting up python3-mpmath (1.2.1-3) ... 540s Setting up python-matplotlib-data (3.6.3-1ubuntu3) ... 540s Setting up libwebpmux3:arm64 (1.3.2-0.4) ... 541s Setting up python3-appdirs (1.4.4-4) ... 541s Setting up libsz2:arm64 (1.1.2-1) ... 541s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 541s Setting up python3-sympy (1.12-7) ... 560s Setting up liblapack3:arm64 (3.12.0-3) ... 560s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 561s Setting up libhts3:arm64 (1.18+ds-1) ... 561s Setting up python3-pysam (0.22.0+ds-1) ... 561s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 562s Setting up libwebpdemux2:arm64 (1.3.2-0.4) ... 562s Setting up xfonts-utils (1:7.7+6build2) ... 562s Setting up python3-fs (2.4.16-3) ... 563s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 563s Setting up libraqm0:arm64 (0.10.1-1) ... 563s Setting up python3-numpy (1:1.24.2-2) ... 570s Setting up python3-lxml:arm64 (5.1.0-1) ... 571s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 571s Setting up xml-core (0.19) ... 572s Setting up python3-contourpy (1.0.7-1build2) ... 572s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 572s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-3.1ubuntu2) ... 572s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1) ... 572s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-3.1ubuntu2) ... 572s Setting up libxft2:arm64 (2.3.6-1) ... 572s Setting up python3-scipy (1.11.4-6) ... 583s Setting up libtk8.6:arm64 (8.6.13-2) ... 583s Setting up python3-pandas-lib:arm64 (2.1.4+dfsg-4ubuntu2) ... 583s Setting up python3-sklearn-lib:arm64 (1.4.1.post1+dfsg-1) ... 583s Setting up python3-h5py-serial (3.10.0-1ubuntu2) ... 584s Setting up fonts-urw-base35 (20200910-8) ... 585s Setting up libcairo2:arm64 (1.18.0-1) ... 585s Setting up python3-pil:arm64 (10.2.0-1) ... 586s Setting up python3-pandas (2.1.4+dfsg-4ubuntu2) ... 602s Setting up python3-h5py (3.10.0-1ubuntu2) ... 603s Setting up python3-sklearn (1.4.1.post1+dfsg-1) ... 610s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... 610s Setting up python3-cairo (1.25.1-2) ... 611s Setting up blt (2.5.3+dfsg-7) ... 611s Setting up python3-tk:arm64 (3.11.5-1) ... 612s Setting up python3-pil.imagetk:arm64 (10.2.0-1) ... 612s Setting up python3-rlpycairo (0.3.0-3) ... 613s Setting up python3-reportlab (4.1.0-1) ... 615s Setting up python3-fonttools (4.46.0-1) ... 618s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 619s Setting up python3-matplotlib (3.6.3-1ubuntu3) ... 624s Setting up python3-seaborn (0.13.2-2) ... 626s Processing triggers for man-db (2.12.0-3) ... 627s Processing triggers for libc-bin (2.39-0ubuntu2) ... 627s Processing triggers for sgml-base (1.31) ... 627s Setting up w3c-sgml-lib (1.3-3) ... 725s Setting up python3-biopython (1.81+dfsg-3) ... 729s Setting up mcaller (1.0.3+git20210624.b415090-3) ... 729s Setting up autopkgtest-satdep (0) ... 741s (Reading database ... 88163 files and directories currently installed.) 741s Removing autopkgtest-satdep (0) ... 742s autopkgtest [21:53:43]: test run-unit-test: [----------------------- 747s testdata/ 747s 1 contigs 747s 1 threads 747s thread finished processing...: 747s 35 observations 747s 35 positions 747s 0 regions with multiple methylated bases 747s 0 observations with skips included 747s 8 observations with too many skips 747s Finished extracting signals 751s testdata/ 751s 1 contigs 751s 1 threads 751s thread finished processing...: 751s 9 observations 751s 9 positions 751s 0 regions with multiple methylated bases 751s 0 observations with skips included 751s 2 observations with too many skips 751s Finished extracting signals 753s testdata/ 753s 1 contigs 753s 4 threads 757s thread finished processing...: 757s 9 observations 757s 9 positions 757s 0 regions with multiple methylated bases 757s 0 observations with skips included 757s 4 observations with too many skips 758s thread finished processing...: 758s 28 observations 758s 28 positions 758s 0 regions with multiple methylated bases 758s 0 observations with skips included 758s 6 observations with too many skips 758s Error: could not find sequence for reference contig li 758s thread finished processing...: 758s 16 observations 758s 16 positions 758s 0 regions with multiple methylated bases 758s 0 observations with skips included 758s 6 observations with too many skips 758s thread finished processing...: 758s 44 observations 758s 44 positions 758s 1 regions with multiple methylated bases 758s 0 observations with skips included 758s 10 observations with too many skips 760s Finished extracting signals 760s Merging files... 760s Training... 760s ['A', 'A', 'A', 'A', 'A', 'A', 'A', 'A', 'A', 'A'] 760s [[-0.18999999999999992, -1.6799999999999997, -2.3, 0.56, -1.41, 1.48, 7.055265349382997], [-1.1300000000000001, -1.67, -1.1, -0.5774999999999999, 0.42, 1.0225, 7.055265349382997], [0.0050000000000000044, -0.29500000000000004, -0.54, 3.96, 1.47, 0.06499999999999995, 7.055265349382997], [3.255, 3.925, 0.03999999999999998, -0.15599999999999997, -1.01, 1.3533333333333333, 7.055265349382997], [-0.07999999999999996, -1.3666666666666665, 0.84, -0.5449999999999999, -3.22, -1.53, 7.055265349382997], [-1.74, -2.56, -2.0774999999999997, 1.84, -0.09999999999999998, -0.3, 7.055265349382997], [1.92, 2.75, 1.59, 1.6433333333333333, 1.59, 1.27, 7.055265349382997], [-1.44, -5.03, 1.4449999999999998, 0.4000000000000001, -0.588, -0.55, 7.055265349382997], [-1.4433333333333334, -0.020000000000000018, -0.0366666666666667, -0.5499999999999999, 0.64, -2.71, 7.055265349382997], [-1.23, -1.635, -0.24, 1.1033333333333333, -2.215, -2.93, 7.055265349382997]] 760s ['GGATTMTTTCA', 'CTGGAMAAAGC', 'GGGCCMTTACC', 'GGTGGMTGAAT', 'GGTTAMCGCGT', 'TGTGGMGAAAC', 'AGAACMCTTTC', 'AAATGMGATTT', 'AGTAGMTTGAT', 'ACTTAMCCGGT'] 760s NN general model scores: 0.875,0.5,0.5,1.0,0.5 760s Cross validation accuracy: 0.68 (+/- 0.44) 760s Finished training 761s PASS 761s autopkgtest [21:54:02]: test run-unit-test: -----------------------] 762s run-unit-test PASS 762s autopkgtest [21:54:03]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 763s autopkgtest [21:54:04]: @@@@@@@@@@@@@@@@@@@@ summary 763s run-unit-test PASS 786s Creating nova instance adt-noble-arm64-mcaller-20240313-214121-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-arm64-server-20240313.img (UUID 20618c62-409e-4a2f-a5b9-d20441a97bde)...