0s autopkgtest [11:34:46]: starting date and time: 2024-03-19 11:34:46+0000 0s autopkgtest [11:34:46]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [11:34:46]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.0a64kaob/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3.12,src:db5.3,src:openssl,src:readline --apt-upgrade libsbml --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3.12/3.12.2-4build3 db5.3/5.3.28+dfsg2-5build1 openssl/3.0.13-0ubuntu2 readline/8.2-3.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-arm64-15.secgroup --name adt-noble-arm64-libsbml-20240319-113446-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 160s autopkgtest [11:37:26]: testbed dpkg architecture: arm64 161s autopkgtest [11:37:27]: testbed apt version: 2.7.12 161s autopkgtest [11:37:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup 162s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 163s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [486 kB] 163s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.7 kB] 163s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 163s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3768 kB] 167s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [659 kB] 167s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 167s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 167s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 167s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4142 kB] 170s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 170s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [56.7 kB] 170s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 176s Fetched 9334 kB in 9s (1098 kB/s) 177s Reading package lists... 182s Reading package lists... 182s Building dependency tree... 182s Reading state information... 184s Calculating upgrade... 185s The following packages will be REMOVED: 185s libreadline8 libssl3 185s The following NEW packages will be installed: 185s libreadline8t64 libssl3t64 185s The following packages have been kept back: 185s libpython3.12-minimal libpython3.12-stdlib python3.12 python3.12-minimal 185s The following packages will be upgraded: 185s openssl readline-common 185s 2 upgraded, 2 newly installed, 2 to remove and 4 not upgraded. 185s Need to get 2987 kB of archives. 185s After this operation, 207 kB of additional disk space will be used. 185s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 185s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 185s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu2 [985 kB] 186s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu2 [1793 kB] 188s Fetched 2987 kB in 2s (1399 kB/s) 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 188s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 188s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 188s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 188s parted depends on libreadline8 (>= 6.0). 188s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 188s libpython3.11-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 188s gpgsm depends on libreadline8 (>= 6.0). 188s gpgconf depends on libreadline8 (>= 6.0). 188s gpg depends on libreadline8 (>= 6.0). 188s gawk depends on libreadline8 (>= 6.0). 188s fdisk depends on libreadline8 (>= 6.0). 188s 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75850 files and directories currently installed.) 188s Removing libreadline8:arm64 (8.2-3) ... 189s Selecting previously unselected package libreadline8t64:arm64. 189s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75838 files and directories currently installed.) 189s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 189s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 189s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 189s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 189s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 189s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 189s Preparing to unpack .../openssl_3.0.13-0ubuntu2_arm64.deb ... 189s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 189s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 189s wget depends on libssl3 (>= 3.0.0). 189s u-boot-tools depends on libssl3 (>= 3.0.0). 189s tnftp depends on libssl3 (>= 3.0.0). 189s tcpdump depends on libssl3 (>= 3.0.0). 189s systemd-resolved depends on libssl3 (>= 3.0.0). 189s systemd depends on libssl3 (>= 3.0.0). 189s sudo depends on libssl3 (>= 3.0.0). 189s sbsigntool depends on libssl3 (>= 3.0.0). 189s rsync depends on libssl3 (>= 3.0.0). 189s python3-cryptography depends on libssl3 (>= 3.0.0). 189s openssh-server depends on libssl3 (>= 3.0.10). 189s openssh-client depends on libssl3 (>= 3.0.10). 189s mtd-utils depends on libssl3 (>= 3.0.0). 189s mokutil depends on libssl3 (>= 3.0.0). 189s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 189s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 189s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 189s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 189s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 189s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 189s libpython3.11-minimal:arm64 depends on libssl3 (>= 3.0.0). 189s libnvme1 depends on libssl3 (>= 3.0.0). 189s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 189s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 189s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 189s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 189s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 189s kmod depends on libssl3 (>= 3.0.0). 189s dhcpcd-base depends on libssl3 (>= 3.0.0). 189s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 189s 189s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75858 files and directories currently installed.) 189s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 189s Selecting previously unselected package libssl3t64:arm64. 189s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75847 files and directories currently installed.) 189s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_arm64.deb ... 189s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu2) ... 190s Setting up libssl3t64:arm64 (3.0.13-0ubuntu2) ... 190s Setting up openssl (3.0.13-0ubuntu2) ... 190s Setting up readline-common (8.2-3.1) ... 190s Setting up libreadline8t64:arm64 (8.2-3.1) ... 190s Processing triggers for libc-bin (2.39-0ubuntu2) ... 190s Processing triggers for man-db (2.12.0-3) ... 191s Processing triggers for install-info (7.1-3) ... 191s Reading package lists... 192s Building dependency tree... 192s Reading state information... 194s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 194s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 194s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 195s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 195s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 199s Reading package lists... 199s Reading package lists... 200s Building dependency tree... 200s Reading state information... 201s Calculating upgrade... 202s The following packages have been kept back: 202s libpython3.12-minimal libpython3.12-stdlib python3.12 python3.12-minimal 202s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 202s Reading package lists... 203s Building dependency tree... 203s Reading state information... 204s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 208s autopkgtest [11:38:14]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 208s autopkgtest [11:38:14]: @@@@@@@@@@@@@@@@@@@@ apt-source libsbml 224s Get:1 http://ftpmaster.internal/ubuntu noble/universe libsbml 5.20.2+dfsg-2build2 (dsc) [3800 B] 224s Get:2 http://ftpmaster.internal/ubuntu noble/universe libsbml 5.20.2+dfsg-2build2 (tar) [15.8 MB] 224s Get:3 http://ftpmaster.internal/ubuntu noble/universe libsbml 5.20.2+dfsg-2build2 (diff) [23.9 kB] 225s gpgv: Signature made Sat Jan 20 08:51:18 2024 UTC 225s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 225s gpgv: Can't check signature: No public key 225s dpkg-source: warning: cannot verify inline signature for ./libsbml_5.20.2+dfsg-2build2.dsc: no acceptable signature found 229s autopkgtest [11:38:35]: testing package libsbml version 5.20.2+dfsg-2build2 230s autopkgtest [11:38:36]: build not needed 239s autopkgtest [11:38:45]: test autodep8-python3: preparing testbed 243s Reading package lists... 244s Building dependency tree... 244s Reading state information... 244s Starting pkgProblemResolver with broken count: 0 245s Starting 2 pkgProblemResolver with broken count: 0 245s Done 246s The following additional packages will be installed: 246s libpython3.12 python3-all python3-sbml5 swig 246s Suggested packages: 246s swig-doc swig-examples 246s The following NEW packages will be installed: 246s autopkgtest-satdep libpython3.12 python3-all python3-sbml5 swig 247s 0 upgraded, 5 newly installed, 0 to remove and 4 not upgraded. 247s Need to get 6983 kB/6984 kB of archives. 247s After this operation, 40.8 MB of additional disk space will be used. 247s Get:1 /tmp/autopkgtest.PN0GC1/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [720 B] 247s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12 arm64 3.12.2-1 [2291 kB] 248s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 python3-all arm64 3.12.1-0ubuntu2 [906 B] 248s Get:4 http://ftpmaster.internal/ubuntu noble/universe arm64 swig arm64 4.2.0-2ubuntu1 [1152 kB] 248s Get:5 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-sbml5 arm64 5.20.2+dfsg-2build2 [3540 kB] 251s Fetched 6983 kB in 3s (2088 kB/s) 251s Selecting previously unselected package libpython3.12:arm64. 251s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75860 files and directories currently installed.) 251s Preparing to unpack .../libpython3.12_3.12.2-1_arm64.deb ... 251s Unpacking libpython3.12:arm64 (3.12.2-1) ... 251s Selecting previously unselected package python3-all. 251s Preparing to unpack .../python3-all_3.12.1-0ubuntu2_arm64.deb ... 251s Unpacking python3-all (3.12.1-0ubuntu2) ... 251s Selecting previously unselected package swig. 251s Preparing to unpack .../swig_4.2.0-2ubuntu1_arm64.deb ... 251s Unpacking swig (4.2.0-2ubuntu1) ... 252s Selecting previously unselected package python3-sbml5. 252s Preparing to unpack .../python3-sbml5_5.20.2+dfsg-2build2_arm64.deb ... 252s Unpacking python3-sbml5 (5.20.2+dfsg-2build2) ... 252s Selecting previously unselected package autopkgtest-satdep. 253s Preparing to unpack .../1-autopkgtest-satdep.deb ... 253s Unpacking autopkgtest-satdep (0) ... 253s Setting up swig (4.2.0-2ubuntu1) ... 253s Setting up python3-all (3.12.1-0ubuntu2) ... 253s Setting up libpython3.12:arm64 (3.12.2-1) ... 253s Setting up python3-sbml5 (5.20.2+dfsg-2build2) ... 254s Setting up autopkgtest-satdep (0) ... 254s Processing triggers for man-db (2.12.0-3) ... 254s Processing triggers for libc-bin (2.39-0ubuntu2) ... 261s (Reading database ... 76726 files and directories currently installed.) 261s Removing autopkgtest-satdep (0) ... 262s autopkgtest [11:39:08]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import libsbml; print(libsbml)" ; done 262s autopkgtest [11:39:08]: test autodep8-python3: [----------------------- 263s autopkgtest [11:39:09]: test autodep8-python3: -----------------------] 264s autopkgtest [11:39:10]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 264s autodep8-python3 PASS (superficial) 264s autopkgtest [11:39:10]: @@@@@@@@@@@@@@@@@@@@ summary 264s autodep8-python3 PASS (superficial) 279s Creating nova instance adt-noble-arm64-libsbml-20240319-113446-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240318.img (UUID 5c8a2751-a139-4090-bc33-580adc5c5778)...