0s autopkgtest [11:28:45]: starting date and time: 2024-03-19 11:28:45+0000 0s autopkgtest [11:28:45]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [11:28:45]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.a8atzo5y/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3.12,src:db5.3,src:openssl,src:readline --apt-upgrade lammps --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3.12/3.12.2-4build3 db5.3/5.3.28+dfsg2-5build1 openssl/3.0.13-0ubuntu2 readline/8.2-3.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-11.secgroup --name adt-noble-arm64-lammps-20240319-112845-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 163s autopkgtest [11:31:28]: testbed dpkg architecture: arm64 163s autopkgtest [11:31:28]: testbed apt version: 2.7.12 163s autopkgtest [11:31:28]: @@@@@@@@@@@@@@@@@@@@ test bed setup 164s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 165s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.7 kB] 165s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3768 kB] 167s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [486 kB] 168s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 168s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [659 kB] 168s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 168s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 168s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 168s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4142 kB] 168s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 168s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [56.7 kB] 168s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 171s Fetched 9334 kB in 5s (1950 kB/s) 171s Reading package lists... 175s Reading package lists... 175s Building dependency tree... 175s Reading state information... 176s Calculating upgrade... 176s The following packages will be REMOVED: 176s libreadline8 libssl3 176s The following NEW packages will be installed: 176s libreadline8t64 libssl3t64 176s The following packages have been kept back: 176s libpython3.12-minimal libpython3.12-stdlib python3.12 python3.12-minimal 176s The following packages will be upgraded: 176s openssl readline-common 176s 2 upgraded, 2 newly installed, 2 to remove and 4 not upgraded. 176s Need to get 2987 kB of archives. 176s After this operation, 207 kB of additional disk space will be used. 176s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 177s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 177s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu2 [985 kB] 177s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu2 [1793 kB] 178s Fetched 2987 kB in 1s (4328 kB/s) 179s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 179s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 179s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 179s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 179s parted depends on libreadline8 (>= 6.0). 179s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 179s gpgsm depends on libreadline8 (>= 6.0). 179s gpgconf depends on libreadline8 (>= 6.0). 179s gpg depends on libreadline8 (>= 6.0). 179s gawk depends on libreadline8 (>= 6.0). 179s fdisk depends on libreadline8 (>= 6.0). 179s 179s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 179s Removing libreadline8:arm64 (8.2-3) ... 179s Selecting previously unselected package libreadline8t64:arm64. 180s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74746 files and directories currently installed.) 180s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 180s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 180s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 180s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 180s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 180s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 180s Preparing to unpack .../openssl_3.0.13-0ubuntu2_arm64.deb ... 180s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 181s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 181s wget depends on libssl3 (>= 3.0.0). 181s u-boot-tools depends on libssl3 (>= 3.0.0). 181s tnftp depends on libssl3 (>= 3.0.0). 181s tcpdump depends on libssl3 (>= 3.0.0). 181s systemd-resolved depends on libssl3 (>= 3.0.0). 181s systemd depends on libssl3 (>= 3.0.0). 181s sudo depends on libssl3 (>= 3.0.0). 181s sbsigntool depends on libssl3 (>= 3.0.0). 181s rsync depends on libssl3 (>= 3.0.0). 181s python3-cryptography depends on libssl3 (>= 3.0.0). 181s openssh-server depends on libssl3 (>= 3.0.10). 181s openssh-client depends on libssl3 (>= 3.0.10). 181s mtd-utils depends on libssl3 (>= 3.0.0). 181s mokutil depends on libssl3 (>= 3.0.0). 181s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 181s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 181s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 181s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 181s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 181s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 181s libnvme1 depends on libssl3 (>= 3.0.0). 181s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 181s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 181s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 181s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 181s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 181s kmod depends on libssl3 (>= 3.0.0). 181s dhcpcd-base depends on libssl3 (>= 3.0.0). 181s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 181s 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 181s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 181s Selecting previously unselected package libssl3t64:arm64. 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74755 files and directories currently installed.) 181s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_arm64.deb ... 181s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu2) ... 181s Setting up libssl3t64:arm64 (3.0.13-0ubuntu2) ... 181s Setting up openssl (3.0.13-0ubuntu2) ... 181s Setting up readline-common (8.2-3.1) ... 181s Setting up libreadline8t64:arm64 (8.2-3.1) ... 181s Processing triggers for libc-bin (2.39-0ubuntu2) ... 181s Processing triggers for man-db (2.12.0-3) ... 182s Processing triggers for install-info (7.1-3) ... 183s Reading package lists... 183s Building dependency tree... 183s Reading state information... 184s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 185s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 185s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 185s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 185s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 187s Reading package lists... 187s Reading package lists... 188s Building dependency tree... 188s Reading state information... 188s Calculating upgrade... 189s The following packages have been kept back: 189s libpython3.12-minimal libpython3.12-stdlib python3.12 python3.12-minimal 189s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 189s Reading package lists... 189s Building dependency tree... 189s Reading state information... 190s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 193s autopkgtest [11:31:58]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024 193s autopkgtest [11:31:58]: @@@@@@@@@@@@@@@@@@@@ apt-source lammps 204s Get:1 http://ftpmaster.internal/ubuntu noble/universe lammps 20240207+dfsg-1 (dsc) [3139 B] 204s Get:2 http://ftpmaster.internal/ubuntu noble/universe lammps 20240207+dfsg-1 (tar) [153 MB] 204s Get:3 http://ftpmaster.internal/ubuntu noble/universe lammps 20240207+dfsg-1 (diff) [16.8 kB] 205s gpgv: Signature made Sun Feb 18 15:30:49 2024 UTC 205s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 205s gpgv: issuer "dparsons@debian.org" 205s gpgv: Can't check signature: No public key 205s dpkg-source: warning: cannot verify inline signature for ./lammps_20240207+dfsg-1.dsc: no acceptable signature found 213s autopkgtest [11:32:18]: testing package lammps version 20240207+dfsg-1 214s autopkgtest [11:32:19]: build not needed 233s autopkgtest [11:32:38]: test crack: preparing testbed 235s Reading package lists... 235s Building dependency tree... 235s Reading state information... 236s Starting pkgProblemResolver with broken count: 0 236s Starting 2 pkgProblemResolver with broken count: 0 236s Done 236s The following additional packages will be installed: 236s cpp-12 fontconfig-config fonts-dejavu-core fonts-dejavu-mono gcc-12 236s gcc-12-base gfortran-12 lammps lammps-data libaec0 libamd-comgr2 236s libamdhip64-5 libasan8 libatomic1 libblas3 libc-dev-bin libc6-dev libcairo2 236s libcc1-0 libcrypt-dev libdeflate0 libdouble-conversion3 libdrm-amdgpu1 236s libdrm-nouveau2 libdrm-radeon1 libevent-pthreads-2.1-7 libfabric1 236s libfftw3-double3 libfontconfig1 libgcc-12-dev libgfortran-12-dev 236s libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglew2.2 236s libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-103-1 libhdf5-hl-100 236s libhsa-runtime64-1 libhsakmt1 libhwasan0 libhwloc-plugins libhwloc15 236s libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjsoncpp25 libkim-api2 236s liblammps0 liblapack3 liblerc4 libllvm17 liblsan0 libmpc3 libmunge2 236s libnetcdf19 libnsl-dev libogg0 libopengl0 libopenmpi3 libpciaccess0 236s libpixman-1-0 libpmix2 libpnetcdf0d libproj25 libpython3.12 librdmacm1t64 236s libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 236s libtheora0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libucx0 236s libvoro++1 libvtk9.1 libvulkan1 libwebp7 libx11-xcb1 libxcb-dri2-0 236s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 236s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxfixes3 libxft2 libxnvctrl0 236s libxrender1 libxshmfence1 libxss1 libxxf86vm1 linux-libc-dev mpi-default-bin 236s ocl-icd-libopencl1 openmpi-bin openmpi-common proj-data rpcsvc-proto 236s x11-common 236s Suggested packages: 236s gcc-12-locales cpp-12-doc gcc-12-doc gfortran-12-doc libcoarrays-dev 236s openkim-models glibc-doc manpages-dev libfftw3-bin libfftw3-dev glew-utils 236s proj-bin tcl8.6 tk8.6 vtk9-doc vtk9-examples opencl-icd gfortran 236s | fortran-compiler 236s Recommended packages: 236s lammps-doc manpages manpages-dev libc-devtools libgl1-amber-dri 236s mesa-vulkan-drivers | vulkan-icd 237s The following NEW packages will be installed: 237s autopkgtest-satdep cpp-12 fontconfig-config fonts-dejavu-core 237s fonts-dejavu-mono gcc-12 gcc-12-base gfortran-12 lammps lammps-data libaec0 237s libamd-comgr2 libamdhip64-5 libasan8 libatomic1 libblas3 libc-dev-bin 237s libc6-dev libcairo2 libcc1-0 libcrypt-dev libdeflate0 libdouble-conversion3 237s libdrm-amdgpu1 libdrm-nouveau2 libdrm-radeon1 libevent-pthreads-2.1-7 237s libfabric1 libfftw3-double3 libfontconfig1 libgcc-12-dev libgfortran-12-dev 237s libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglew2.2 237s libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-103-1 libhdf5-hl-100 237s libhsa-runtime64-1 libhsakmt1 libhwasan0 libhwloc-plugins libhwloc15 237s libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjsoncpp25 libkim-api2 237s liblammps0 liblapack3 liblerc4 libllvm17 liblsan0 libmpc3 libmunge2 237s libnetcdf19 libnsl-dev libogg0 libopengl0 libopenmpi3 libpciaccess0 237s libpixman-1-0 libpmix2 libpnetcdf0d libproj25 libpython3.12 librdmacm1t64 237s libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 237s libtheora0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libucx0 237s libvoro++1 libvtk9.1 libvulkan1 libwebp7 libx11-xcb1 libxcb-dri2-0 237s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 237s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxfixes3 libxft2 libxnvctrl0 237s libxrender1 libxshmfence1 libxss1 libxxf86vm1 linux-libc-dev mpi-default-bin 237s ocl-icd-libopencl1 openmpi-bin openmpi-common proj-data rpcsvc-proto 237s x11-common 237s 0 upgraded, 117 newly installed, 0 to remove and 4 not upgraded. 237s Need to get 174 MB/174 MB of archives. 237s After this operation, 718 MB of additional disk space will be used. 237s Get:1 /tmp/autopkgtest.1kosEq/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B] 237s Get:2 http://ftpmaster.internal/ubuntu noble/universe arm64 gcc-12-base arm64 12.3.0-15ubuntu1 [45.5 kB] 237s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 238s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 238s Get:5 http://ftpmaster.internal/ubuntu noble/universe arm64 cpp-12 arm64 12.3.0-15ubuntu1 [9585 kB] 238s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 238s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 238s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 238s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 238s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 238s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 238s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 238s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 238s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 238s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 238s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 238s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 238s Get:18 http://ftpmaster.internal/ubuntu noble/universe arm64 libgcc-12-dev arm64 12.3.0-15ubuntu1 [1157 kB] 238s Get:19 http://ftpmaster.internal/ubuntu noble/universe arm64 gcc-12 arm64 12.3.0-15ubuntu1 [19.1 MB] 239s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 239s Get:21 http://ftpmaster.internal/ubuntu noble/universe arm64 libgfortran-12-dev arm64 12.3.0-15ubuntu1 [471 kB] 239s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 239s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 239s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 239s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 239s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 239s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 239s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 239s Get:29 http://ftpmaster.internal/ubuntu noble/universe arm64 gfortran-12 arm64 12.3.0-15ubuntu1 [10.1 MB] 239s Get:30 http://ftpmaster.internal/ubuntu noble/universe arm64 lammps-data all 20240207+dfsg-1 [9700 kB] 240s Get:31 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 240s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libllvm17 arm64 1:17.0.6-5build1 [25.0 MB] 240s Get:33 http://ftpmaster.internal/ubuntu noble/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3 [14.1 MB] 240s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-amdgpu1 arm64 2.4.120-2 [20.4 kB] 240s Get:35 http://ftpmaster.internal/ubuntu noble/universe arm64 libhsakmt1 arm64 5.7.0-1 [63.6 kB] 240s Get:36 http://ftpmaster.internal/ubuntu noble/universe arm64 libhsa-runtime64-1 arm64 5.7.1-1 [286 kB] 240s Get:37 http://ftpmaster.internal/ubuntu noble/universe arm64 libamdhip64-5 arm64 5.2.3-12 [5134 kB] 241s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 241s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 241s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 241s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 241s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 241s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 241s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 241s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 241s Get:46 http://ftpmaster.internal/ubuntu noble/universe arm64 libdouble-conversion3 arm64 3.3.0-1 [37.2 kB] 241s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-nouveau2 arm64 2.4.120-2 [17.8 kB] 241s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-radeon1 arm64 2.4.120-2 [20.9 kB] 241s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libevent-pthreads-2.1-7 arm64 2.1.12-stable-9 [7738 B] 241s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 librdmacm1t64 arm64 50.0-2 [70.6 kB] 241s Get:51 http://ftpmaster.internal/ubuntu noble/universe arm64 libfabric1 arm64 1.17.0-3 [537 kB] 241s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libfftw3-double3 arm64 3.3.10-1ubuntu1 [380 kB] 241s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libvulkan1 arm64 1.3.275.0-1 [150 kB] 241s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libglapi-mesa arm64 24.0.1-1ubuntu1 [57.8 kB] 241s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-dri3-0 arm64 1.15-1 [7108 B] 241s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libgl1-mesa-dri arm64 24.0.1-1ubuntu1 [8226 kB] 241s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libglvnd0 arm64 1.7.0-1 [60.0 kB] 241s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libx11-xcb1 arm64 2:1.8.7-1 [7836 B] 241s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-dri2-0 arm64 1.15-1 [7244 B] 241s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-glx0 arm64 1.15-1 [25.2 kB] 241s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-present0 arm64 1.15-1 [5732 B] 241s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-randr0 arm64 1.15-1 [18.2 kB] 241s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-sync1 arm64 1.15-1 [9412 B] 241s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-xfixes0 arm64 1.15-1 [10.3 kB] 241s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libxfixes3 arm64 1:6.0.0-2 [11.0 kB] 241s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libxshmfence1 arm64 1.3-1build4 [5444 B] 241s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libxxf86vm1 arm64 1:1.1.4-1build3 [10.3 kB] 241s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libglx-mesa0 arm64 24.0.1-1ubuntu1 [166 kB] 241s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libglx0 arm64 1.7.0-1 [32.4 kB] 241s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libgl1 arm64 1.7.0-1 [107 kB] 241s Get:71 http://ftpmaster.internal/ubuntu noble/universe arm64 libgl2ps1.4 arm64 1.4.2+dfsg1-2 [41.5 kB] 241s Get:72 http://ftpmaster.internal/ubuntu noble/universe arm64 libglew2.2 arm64 2.2.0-4 [200 kB] 241s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 241s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.10+repack-3ubuntu1 [1189 kB] 241s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB] 241s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 libhwloc15 arm64 2.10.0-1 [158 kB] 241s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 241s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 241s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libjsoncpp25 arm64 1.9.5-6 [76.0 kB] 241s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 libkim-api2 arm64 2.3.0-1 [554 kB] 241s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 241s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libnetcdf19 arm64 1:4.9.2-3ubuntu1 [470 kB] 241s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libmunge2 arm64 0.5.15-3ubuntu1 [14.8 kB] 241s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libpciaccess0 arm64 0.17-3 [18.6 kB] 241s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu1 [11.1 kB] 241s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1 [37.3 kB] 241s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libhwloc-plugins arm64 2.10.0-1 [15.7 kB] 241s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libpmix2 arm64 5.0.1-4 [659 kB] 241s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libucx0 arm64 1.16.0+ds-4 [1076 kB] 241s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 libopenmpi3 arm64 4.1.6-5ubuntu1 [3081 kB] 241s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libpnetcdf0d arm64 1.12.3-2 [842 kB] 241s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12 arm64 3.12.2-1 [2291 kB] 241s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libvoro++1 arm64 0.5+revert-to-0.4.6+dfsg1-1 [101 kB] 241s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libogg0 arm64 1.3.5-3 [22.1 kB] 241s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libopengl0 arm64 1.7.0-1 [35.9 kB] 241s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 proj-data all 9.3.1-1 [7867 kB] 242s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 242s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 242s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 242s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 242s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 242s Get:102 http://ftpmaster.internal/ubuntu noble/universe arm64 libproj25 arm64 9.3.1-1 [1261 kB] 242s Get:103 http://ftpmaster.internal/ubuntu noble/universe arm64 libtbbmalloc2 arm64 2021.11.0-2ubuntu2 [43.8 kB] 242s Get:104 http://ftpmaster.internal/ubuntu noble/universe arm64 libtbbbind-2-5 arm64 2021.11.0-2ubuntu2 [16.4 kB] 242s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 libtbb12 arm64 2021.11.0-2ubuntu2 [79.9 kB] 242s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 242s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libtheora0 arm64 1.1.1+dfsg.1-16.1 [221 kB] 242s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 242s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 242s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 242s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 242s Get:112 http://ftpmaster.internal/ubuntu noble/universe arm64 libvtk9.1 arm64 9.1.0+really9.1.0+dfsg2-7build1 [19.2 MB] 243s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 liblammps0 arm64 20240207+dfsg-1 [6751 kB] 245s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 openmpi-common all 4.1.6-5ubuntu1 [178 kB] 245s Get:115 http://ftpmaster.internal/ubuntu noble/universe arm64 openmpi-bin arm64 4.1.6-5ubuntu1 [123 kB] 245s Get:116 http://ftpmaster.internal/ubuntu noble/universe arm64 mpi-default-bin arm64 1.15 [2336 B] 245s Get:117 http://ftpmaster.internal/ubuntu noble/universe arm64 lammps arm64 20240207+dfsg-1 [14.9 kB] 251s Fetched 174 MB in 8s (20.8 MB/s) 251s Selecting previously unselected package gcc-12-base:arm64. 251s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74768 files and directories currently installed.) 251s Preparing to unpack .../000-gcc-12-base_12.3.0-15ubuntu1_arm64.deb ... 251s Unpacking gcc-12-base:arm64 (12.3.0-15ubuntu1) ... 251s Selecting previously unselected package libisl23:arm64. 251s Preparing to unpack .../001-libisl23_0.26-3_arm64.deb ... 251s Unpacking libisl23:arm64 (0.26-3) ... 251s Selecting previously unselected package libmpc3:arm64. 251s Preparing to unpack .../002-libmpc3_1.3.1-1_arm64.deb ... 251s Unpacking libmpc3:arm64 (1.3.1-1) ... 252s Selecting previously unselected package cpp-12. 252s Preparing to unpack .../003-cpp-12_12.3.0-15ubuntu1_arm64.deb ... 252s Unpacking cpp-12 (12.3.0-15ubuntu1) ... 252s Selecting previously unselected package fonts-dejavu-mono. 252s Preparing to unpack .../004-fonts-dejavu-mono_2.37-8_all.deb ... 252s Unpacking fonts-dejavu-mono (2.37-8) ... 252s Selecting previously unselected package fonts-dejavu-core. 252s Preparing to unpack .../005-fonts-dejavu-core_2.37-8_all.deb ... 252s Unpacking fonts-dejavu-core (2.37-8) ... 252s Selecting previously unselected package fontconfig-config. 252s Preparing to unpack .../006-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 252s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 253s Selecting previously unselected package libcc1-0:arm64. 253s Preparing to unpack .../007-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 253s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 253s Selecting previously unselected package libgomp1:arm64. 253s Preparing to unpack .../008-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 253s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 253s Selecting previously unselected package libitm1:arm64. 253s Preparing to unpack .../009-libitm1_14-20240303-1ubuntu1_arm64.deb ... 253s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 253s Selecting previously unselected package libatomic1:arm64. 253s Preparing to unpack .../010-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 253s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 253s Selecting previously unselected package libasan8:arm64. 253s Preparing to unpack .../011-libasan8_14-20240303-1ubuntu1_arm64.deb ... 253s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 253s Selecting previously unselected package liblsan0:arm64. 253s Preparing to unpack .../012-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 253s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 253s Selecting previously unselected package libtsan2:arm64. 254s Preparing to unpack .../013-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 254s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 254s Selecting previously unselected package libubsan1:arm64. 254s Preparing to unpack .../014-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 254s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 254s Selecting previously unselected package libhwasan0:arm64. 254s Preparing to unpack .../015-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 254s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 254s Selecting previously unselected package libgcc-12-dev:arm64. 255s Preparing to unpack .../016-libgcc-12-dev_12.3.0-15ubuntu1_arm64.deb ... 255s Unpacking libgcc-12-dev:arm64 (12.3.0-15ubuntu1) ... 255s Selecting previously unselected package gcc-12. 255s Preparing to unpack .../017-gcc-12_12.3.0-15ubuntu1_arm64.deb ... 255s Unpacking gcc-12 (12.3.0-15ubuntu1) ... 256s Selecting previously unselected package libgfortran5:arm64. 256s Preparing to unpack .../018-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 256s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 257s Selecting previously unselected package libgfortran-12-dev:arm64. 257s Preparing to unpack .../019-libgfortran-12-dev_12.3.0-15ubuntu1_arm64.deb ... 257s Unpacking libgfortran-12-dev:arm64 (12.3.0-15ubuntu1) ... 257s Selecting previously unselected package libc-dev-bin. 257s Preparing to unpack .../020-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 257s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 257s Selecting previously unselected package linux-libc-dev:arm64. 257s Preparing to unpack .../021-linux-libc-dev_6.8.0-11.11_arm64.deb ... 257s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 257s Selecting previously unselected package libcrypt-dev:arm64. 258s Preparing to unpack .../022-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 258s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 258s Selecting previously unselected package libtirpc-dev:arm64. 258s Preparing to unpack .../023-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 258s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 259s Selecting previously unselected package libnsl-dev:arm64. 259s Preparing to unpack .../024-libnsl-dev_1.3.0-3_arm64.deb ... 259s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 259s Selecting previously unselected package rpcsvc-proto. 259s Preparing to unpack .../025-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 259s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 259s Selecting previously unselected package libc6-dev:arm64. 260s Preparing to unpack .../026-libc6-dev_2.39-0ubuntu2_arm64.deb ... 260s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 260s Selecting previously unselected package gfortran-12. 260s Preparing to unpack .../027-gfortran-12_12.3.0-15ubuntu1_arm64.deb ... 260s Unpacking gfortran-12 (12.3.0-15ubuntu1) ... 260s Selecting previously unselected package lammps-data. 261s Preparing to unpack .../028-lammps-data_20240207+dfsg-1_all.deb ... 261s Unpacking lammps-data (20240207+dfsg-1) ... 261s Selecting previously unselected package libaec0:arm64. 261s Preparing to unpack .../029-libaec0_1.1.2-1_arm64.deb ... 261s Unpacking libaec0:arm64 (1.1.2-1) ... 261s Selecting previously unselected package libllvm17:arm64. 261s Preparing to unpack .../030-libllvm17_1%3a17.0.6-5build1_arm64.deb ... 261s Unpacking libllvm17:arm64 (1:17.0.6-5build1) ... 262s Selecting previously unselected package libamd-comgr2:arm64. 262s Preparing to unpack .../031-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3_arm64.deb ... 262s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3) ... 262s Selecting previously unselected package libdrm-amdgpu1:arm64. 262s Preparing to unpack .../032-libdrm-amdgpu1_2.4.120-2_arm64.deb ... 262s Unpacking libdrm-amdgpu1:arm64 (2.4.120-2) ... 262s Selecting previously unselected package libhsakmt1:arm64. 262s Preparing to unpack .../033-libhsakmt1_5.7.0-1_arm64.deb ... 262s Unpacking libhsakmt1:arm64 (5.7.0-1) ... 262s Selecting previously unselected package libhsa-runtime64-1. 262s Preparing to unpack .../034-libhsa-runtime64-1_5.7.1-1_arm64.deb ... 262s Unpacking libhsa-runtime64-1 (5.7.1-1) ... 262s Selecting previously unselected package libamdhip64-5. 262s Preparing to unpack .../035-libamdhip64-5_5.2.3-12_arm64.deb ... 262s Unpacking libamdhip64-5 (5.2.3-12) ... 263s Selecting previously unselected package libblas3:arm64. 263s Preparing to unpack .../036-libblas3_3.12.0-3_arm64.deb ... 263s Unpacking libblas3:arm64 (3.12.0-3) ... 263s Selecting previously unselected package libfontconfig1:arm64. 263s Preparing to unpack .../037-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 263s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 263s Selecting previously unselected package libpixman-1-0:arm64. 263s Preparing to unpack .../038-libpixman-1-0_0.42.2-1_arm64.deb ... 263s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 263s Selecting previously unselected package libxcb-render0:arm64. 263s Preparing to unpack .../039-libxcb-render0_1.15-1_arm64.deb ... 263s Unpacking libxcb-render0:arm64 (1.15-1) ... 263s Selecting previously unselected package libxcb-shm0:arm64. 263s Preparing to unpack .../040-libxcb-shm0_1.15-1_arm64.deb ... 263s Unpacking libxcb-shm0:arm64 (1.15-1) ... 263s Selecting previously unselected package libxrender1:arm64. 263s Preparing to unpack .../041-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 263s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 263s Selecting previously unselected package libcairo2:arm64. 263s Preparing to unpack .../042-libcairo2_1.18.0-1_arm64.deb ... 263s Unpacking libcairo2:arm64 (1.18.0-1) ... 263s Selecting previously unselected package libdeflate0:arm64. 263s Preparing to unpack .../043-libdeflate0_1.19-1_arm64.deb ... 263s Unpacking libdeflate0:arm64 (1.19-1) ... 263s Selecting previously unselected package libdouble-conversion3:arm64. 264s Preparing to unpack .../044-libdouble-conversion3_3.3.0-1_arm64.deb ... 264s Unpacking libdouble-conversion3:arm64 (3.3.0-1) ... 264s Selecting previously unselected package libdrm-nouveau2:arm64. 264s Preparing to unpack .../045-libdrm-nouveau2_2.4.120-2_arm64.deb ... 264s Unpacking libdrm-nouveau2:arm64 (2.4.120-2) ... 264s Selecting previously unselected package libdrm-radeon1:arm64. 264s Preparing to unpack .../046-libdrm-radeon1_2.4.120-2_arm64.deb ... 264s Unpacking libdrm-radeon1:arm64 (2.4.120-2) ... 264s Selecting previously unselected package libevent-pthreads-2.1-7:arm64. 264s Preparing to unpack .../047-libevent-pthreads-2.1-7_2.1.12-stable-9_arm64.deb ... 264s Unpacking libevent-pthreads-2.1-7:arm64 (2.1.12-stable-9) ... 264s Selecting previously unselected package librdmacm1t64:arm64. 265s Preparing to unpack .../048-librdmacm1t64_50.0-2_arm64.deb ... 265s Unpacking librdmacm1t64:arm64 (50.0-2) ... 265s Selecting previously unselected package libfabric1:arm64. 265s Preparing to unpack .../049-libfabric1_1.17.0-3_arm64.deb ... 265s Unpacking libfabric1:arm64 (1.17.0-3) ... 265s Selecting previously unselected package libfftw3-double3:arm64. 265s Preparing to unpack .../050-libfftw3-double3_3.3.10-1ubuntu1_arm64.deb ... 265s Unpacking libfftw3-double3:arm64 (3.3.10-1ubuntu1) ... 265s Selecting previously unselected package libvulkan1:arm64. 265s Preparing to unpack .../051-libvulkan1_1.3.275.0-1_arm64.deb ... 265s Unpacking libvulkan1:arm64 (1.3.275.0-1) ... 265s Selecting previously unselected package libglapi-mesa:arm64. 265s Preparing to unpack .../052-libglapi-mesa_24.0.1-1ubuntu1_arm64.deb ... 265s Unpacking libglapi-mesa:arm64 (24.0.1-1ubuntu1) ... 265s Selecting previously unselected package libxcb-dri3-0:arm64. 265s Preparing to unpack .../053-libxcb-dri3-0_1.15-1_arm64.deb ... 265s Unpacking libxcb-dri3-0:arm64 (1.15-1) ... 265s Selecting previously unselected package libgl1-mesa-dri:arm64. 265s Preparing to unpack .../054-libgl1-mesa-dri_24.0.1-1ubuntu1_arm64.deb ... 265s Unpacking libgl1-mesa-dri:arm64 (24.0.1-1ubuntu1) ... 266s Selecting previously unselected package libglvnd0:arm64. 266s Preparing to unpack .../055-libglvnd0_1.7.0-1_arm64.deb ... 266s Unpacking libglvnd0:arm64 (1.7.0-1) ... 266s Selecting previously unselected package libx11-xcb1:arm64. 266s Preparing to unpack .../056-libx11-xcb1_2%3a1.8.7-1_arm64.deb ... 266s Unpacking libx11-xcb1:arm64 (2:1.8.7-1) ... 266s Selecting previously unselected package libxcb-dri2-0:arm64. 266s Preparing to unpack .../057-libxcb-dri2-0_1.15-1_arm64.deb ... 266s Unpacking libxcb-dri2-0:arm64 (1.15-1) ... 266s Selecting previously unselected package libxcb-glx0:arm64. 266s Preparing to unpack .../058-libxcb-glx0_1.15-1_arm64.deb ... 266s Unpacking libxcb-glx0:arm64 (1.15-1) ... 266s Selecting previously unselected package libxcb-present0:arm64. 266s Preparing to unpack .../059-libxcb-present0_1.15-1_arm64.deb ... 266s Unpacking libxcb-present0:arm64 (1.15-1) ... 266s Selecting previously unselected package libxcb-randr0:arm64. 266s Preparing to unpack .../060-libxcb-randr0_1.15-1_arm64.deb ... 266s Unpacking libxcb-randr0:arm64 (1.15-1) ... 266s Selecting previously unselected package libxcb-sync1:arm64. 266s Preparing to unpack .../061-libxcb-sync1_1.15-1_arm64.deb ... 266s Unpacking libxcb-sync1:arm64 (1.15-1) ... 266s Selecting previously unselected package libxcb-xfixes0:arm64. 266s Preparing to unpack .../062-libxcb-xfixes0_1.15-1_arm64.deb ... 266s Unpacking libxcb-xfixes0:arm64 (1.15-1) ... 266s Selecting previously unselected package libxfixes3:arm64. 267s Preparing to unpack .../063-libxfixes3_1%3a6.0.0-2_arm64.deb ... 267s Unpacking libxfixes3:arm64 (1:6.0.0-2) ... 267s Selecting previously unselected package libxshmfence1:arm64. 267s Preparing to unpack .../064-libxshmfence1_1.3-1build4_arm64.deb ... 267s Unpacking libxshmfence1:arm64 (1.3-1build4) ... 267s Selecting previously unselected package libxxf86vm1:arm64. 267s Preparing to unpack .../065-libxxf86vm1_1%3a1.1.4-1build3_arm64.deb ... 267s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build3) ... 267s Selecting previously unselected package libglx-mesa0:arm64. 267s Preparing to unpack .../066-libglx-mesa0_24.0.1-1ubuntu1_arm64.deb ... 267s Unpacking libglx-mesa0:arm64 (24.0.1-1ubuntu1) ... 267s Selecting previously unselected package libglx0:arm64. 267s Preparing to unpack .../067-libglx0_1.7.0-1_arm64.deb ... 267s Unpacking libglx0:arm64 (1.7.0-1) ... 267s Selecting previously unselected package libgl1:arm64. 267s Preparing to unpack .../068-libgl1_1.7.0-1_arm64.deb ... 267s Unpacking libgl1:arm64 (1.7.0-1) ... 267s Selecting previously unselected package libgl2ps1.4. 267s Preparing to unpack .../069-libgl2ps1.4_1.4.2+dfsg1-2_arm64.deb ... 267s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2) ... 267s Selecting previously unselected package libglew2.2:arm64. 267s Preparing to unpack .../070-libglew2.2_2.2.0-4_arm64.deb ... 267s Unpacking libglew2.2:arm64 (2.2.0-4) ... 267s Selecting previously unselected package libsz2:arm64. 267s Preparing to unpack .../071-libsz2_1.1.2-1_arm64.deb ... 267s Unpacking libsz2:arm64 (1.1.2-1) ... 267s Selecting previously unselected package libhdf5-103-1:arm64. 268s Preparing to unpack .../072-libhdf5-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 268s Unpacking libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 268s Selecting previously unselected package libhdf5-hl-100:arm64. 268s Preparing to unpack .../073-libhdf5-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ... 268s Unpacking libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 268s Selecting previously unselected package libhwloc15:arm64. 268s Preparing to unpack .../074-libhwloc15_2.10.0-1_arm64.deb ... 268s Unpacking libhwloc15:arm64 (2.10.0-1) ... 268s Selecting previously unselected package libjpeg-turbo8:arm64. 268s Preparing to unpack .../075-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 268s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 268s Selecting previously unselected package libjpeg8:arm64. 268s Preparing to unpack .../076-libjpeg8_8c-2ubuntu11_arm64.deb ... 268s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 268s Selecting previously unselected package libjsoncpp25:arm64. 268s Preparing to unpack .../077-libjsoncpp25_1.9.5-6_arm64.deb ... 268s Unpacking libjsoncpp25:arm64 (1.9.5-6) ... 268s Selecting previously unselected package libkim-api2:arm64. 268s Preparing to unpack .../078-libkim-api2_2.3.0-1_arm64.deb ... 268s Unpacking libkim-api2:arm64 (2.3.0-1) ... 268s Selecting previously unselected package liblapack3:arm64. 268s Preparing to unpack .../079-liblapack3_3.12.0-3_arm64.deb ... 268s Unpacking liblapack3:arm64 (3.12.0-3) ... 268s Selecting previously unselected package libnetcdf19:arm64. 268s Preparing to unpack .../080-libnetcdf19_1%3a4.9.2-3ubuntu1_arm64.deb ... 268s Unpacking libnetcdf19:arm64 (1:4.9.2-3ubuntu1) ... 268s Selecting previously unselected package libmunge2:arm64. 269s Preparing to unpack .../081-libmunge2_0.5.15-3ubuntu1_arm64.deb ... 269s Unpacking libmunge2:arm64 (0.5.15-3ubuntu1) ... 269s Selecting previously unselected package libpciaccess0:arm64. 269s Preparing to unpack .../082-libpciaccess0_0.17-3_arm64.deb ... 269s Unpacking libpciaccess0:arm64 (0.17-3) ... 269s Selecting previously unselected package libxnvctrl0:arm64. 269s Preparing to unpack .../083-libxnvctrl0_510.47.03-0ubuntu1_arm64.deb ... 269s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu1) ... 269s Selecting previously unselected package ocl-icd-libopencl1:arm64. 269s Preparing to unpack .../084-ocl-icd-libopencl1_2.3.2-1_arm64.deb ... 269s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1) ... 269s Selecting previously unselected package libhwloc-plugins:arm64. 269s Preparing to unpack .../085-libhwloc-plugins_2.10.0-1_arm64.deb ... 269s Unpacking libhwloc-plugins:arm64 (2.10.0-1) ... 269s Selecting previously unselected package libpmix2:arm64. 269s Preparing to unpack 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(0.5+revert-to-0.4.6+dfsg1-1) ... 270s Selecting previously unselected package libogg0:arm64. 270s Preparing to unpack .../092-libogg0_1.3.5-3_arm64.deb ... 270s Unpacking libogg0:arm64 (1.3.5-3) ... 270s Selecting previously unselected package libopengl0:arm64. 270s Preparing to unpack .../093-libopengl0_1.7.0-1_arm64.deb ... 270s Unpacking libopengl0:arm64 (1.7.0-1) ... 270s Selecting previously unselected package proj-data. 270s Preparing to unpack .../094-proj-data_9.3.1-1_all.deb ... 270s Unpacking proj-data (9.3.1-1) ... 270s Selecting previously unselected package libjbig0:arm64. 270s Preparing to unpack .../095-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 270s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 270s Selecting previously unselected package liblerc4:arm64. 270s Preparing to unpack .../096-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 270s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 270s Selecting previously unselected package libsharpyuv0:arm64. 270s Preparing to unpack .../097-libsharpyuv0_1.3.2-0.4_arm64.deb ... 270s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 271s Selecting previously unselected package libwebp7:arm64. 271s Preparing to unpack .../098-libwebp7_1.3.2-0.4_arm64.deb ... 271s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 271s Selecting previously unselected package libtiff6:arm64. 271s Preparing to unpack .../099-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 271s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 271s Selecting previously unselected package libproj25:arm64. 271s Preparing to unpack .../100-libproj25_9.3.1-1_arm64.deb ... 271s Unpacking libproj25:arm64 (9.3.1-1) ... 271s Selecting previously unselected package libtbbmalloc2:arm64. 271s Preparing to unpack .../101-libtbbmalloc2_2021.11.0-2ubuntu2_arm64.deb ... 271s Unpacking libtbbmalloc2:arm64 (2021.11.0-2ubuntu2) ... 271s Selecting previously unselected package libtbbbind-2-5:arm64. 271s Preparing to unpack .../102-libtbbbind-2-5_2021.11.0-2ubuntu2_arm64.deb ... 271s Unpacking libtbbbind-2-5:arm64 (2021.11.0-2ubuntu2) ... 271s Selecting previously unselected package libtbb12:arm64. 271s Preparing to unpack .../103-libtbb12_2021.11.0-2ubuntu2_arm64.deb ... 271s Unpacking libtbb12:arm64 (2021.11.0-2ubuntu2) ... 271s Selecting previously unselected package libtcl8.6:arm64. 271s Preparing to unpack .../104-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 271s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 271s Selecting previously unselected package libtheora0:arm64. 271s Preparing to unpack .../105-libtheora0_1.1.1+dfsg.1-16.1_arm64.deb ... 271s Unpacking libtheora0:arm64 (1.1.1+dfsg.1-16.1) ... 271s Selecting previously unselected package libxft2:arm64. 271s Preparing to unpack .../106-libxft2_2.3.6-1_arm64.deb ... 271s Unpacking libxft2:arm64 (2.3.6-1) ... 271s Selecting previously unselected package x11-common. 272s Preparing to unpack .../107-x11-common_1%3a7.7+23ubuntu2_all.deb ... 272s Unpacking x11-common (1:7.7+23ubuntu2) ... 272s Selecting previously unselected package libxss1:arm64. 272s Preparing to unpack .../108-libxss1_1%3a1.2.3-1build2_arm64.deb ... 272s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 272s Selecting previously unselected package libtk8.6:arm64. 272s Preparing to unpack .../109-libtk8.6_8.6.13-2_arm64.deb ... 272s Unpacking libtk8.6:arm64 (8.6.13-2) ... 272s Selecting previously unselected package libvtk9.1:arm64. 272s Preparing to unpack .../110-libvtk9.1_9.1.0+really9.1.0+dfsg2-7build1_arm64.deb ... 272s Unpacking libvtk9.1:arm64 (9.1.0+really9.1.0+dfsg2-7build1) ... 272s Selecting previously unselected package liblammps0:arm64. 273s Preparing to unpack .../111-liblammps0_20240207+dfsg-1_arm64.deb ... 273s Unpacking liblammps0:arm64 (20240207+dfsg-1) ... 273s Selecting previously unselected package openmpi-common. 273s Preparing to unpack .../112-openmpi-common_4.1.6-5ubuntu1_all.deb ... 273s Unpacking openmpi-common (4.1.6-5ubuntu1) ... 273s Selecting previously unselected package openmpi-bin. 273s 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Setting up libdrm-nouveau2:arm64 (2.4.120-2) ... 274s Setting up libxcb-xfixes0:arm64 (1.15-1) ... 274s Setting up libogg0:arm64 (1.3.5-3) ... 274s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 274s Setting up proj-data (9.3.1-1) ... 274s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 274s Setting up lammps-data (20240207+dfsg-1) ... 274s Setting up libxcb-render0:arm64 (1.15-1) ... 274s Setting up libdrm-radeon1:arm64 (2.4.120-2) ... 274s Setting up libglvnd0:arm64 (1.7.0-1) ... 274s Setting up libxcb-glx0:arm64 (1.15-1) ... 274s Setting up x11-common (1:7.7+23ubuntu2) ... 275s Setting up libdeflate0:arm64 (1.19-1) ... 275s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 275s Setting up libxcb-shm0:arm64 (1.15-1) ... 275s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 275s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 275s Setting up libaec0:arm64 (1.1.2-1) ... 275s Setting up libopengl0:arm64 (1.7.0-1) ... 275s Setting up libxxf86vm1:arm64 (1:1.1.4-1build3) ... 275s Setting up gcc-12-base:arm64 (12.3.0-15ubuntu1) ... 275s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu1) ... 275s Setting up libxcb-present0:arm64 (1.15-1) ... 275s Setting up libblas3:arm64 (3.12.0-3) ... 275s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 275s Setting up libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 275s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 275s Setting up libmunge2:arm64 (0.5.15-3ubuntu1) ... 275s Setting up libxfixes3:arm64 (1:6.0.0-2) ... 275s Setting up libxcb-sync1:arm64 (1.15-1) ... 275s Setting up fonts-dejavu-mono (2.37-8) ... 275s Setting up libhwloc15:arm64 (2.10.0-1) ... 275s Setting up libmpc3:arm64 (1.3.1-1) ... 275s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 275s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 275s Setting up libjsoncpp25:arm64 (1.9.5-6) ... 275s Setting up fonts-dejavu-core (2.37-8) ... 275s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 275s Setting up libfftw3-double3:arm64 (3.3.10-1ubuntu1) ... 275s Setting up libglapi-mesa:arm64 (24.0.1-1ubuntu1) ... 275s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 275s Setting up libvulkan1:arm64 (1.3.275.0-1) ... 275s Setting up libwebp7:arm64 (1.3.2-0.4) ... 275s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 275s Setting up libxcb-dri2-0:arm64 (1.15-1) ... 275s Setting up libnsl-dev:arm64 (1.3.0-3) ... 275s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1) ... 275s Setting up libxshmfence1:arm64 (1.3-1build4) ... 275s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 275s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 275s Setting up libxcb-randr0:arm64 (1.15-1) ... 275s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 275s Setting up openmpi-common (4.1.6-5ubuntu1) ... 275s Setting up librdmacm1t64:arm64 (50.0-2) ... 275s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 275s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 275s Setting up libisl23:arm64 (0.26-3) ... 275s Setting up libc-dev-bin (2.39-0ubuntu2) ... 275s Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 275s Setting up libllvm17:arm64 (1:17.0.6-5build1) ... 275s Setting up libpython3.12:arm64 (3.12.2-1) ... 275s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 275s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 275s Setting up libsz2:arm64 (1.1.2-1) ... 275s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 275s Setting up libevent-pthreads-2.1-7:arm64 (2.1.12-stable-9) ... 275s Setting up libdrm-amdgpu1:arm64 (2.4.120-2) ... 275s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 275s Setting up libfabric1:arm64 (1.17.0-3) ... 275s Setting up liblapack3:arm64 (3.12.0-3) ... 275s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 275s Setting up cpp-12 (12.3.0-15ubuntu1) ... 275s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 275s Setting up libgl1-mesa-dri:arm64 (24.0.1-1ubuntu1) ... 275s Setting up libhwloc-plugins:arm64 (2.10.0-1) ... 275s Setting up libtbbbind-2-5:arm64 (2021.11.0-2ubuntu2) ... 275s Setting up libgcc-12-dev:arm64 (12.3.0-15ubuntu1) ... 275s Setting up libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 275s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 275s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 275s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3) ... 275s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 275s Setting up libhsakmt1:arm64 (5.7.0-1) ... 275s Setting up libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 275s Setting up libxft2:arm64 (2.3.6-1) ... 275s Setting up libglx-mesa0:arm64 (24.0.1-1ubuntu1) ... 275s Setting up libglx0:arm64 (1.7.0-1) ... 275s Setting up libproj25:arm64 (9.3.1-1) ... 275s Setting up libpmix2:arm64 (5.0.1-4) ... 275s Setting up libtk8.6:arm64 (8.6.13-2) ... 275s Setting up libgfortran-12-dev:arm64 (12.3.0-15ubuntu1) ... 275s Setting up libtbb12:arm64 (2021.11.0-2ubuntu2) ... 275s Setting up libcairo2:arm64 (1.18.0-1) ... 275s Setting up libgl1:arm64 (1.7.0-1) ... 275s Setting up gcc-12 (12.3.0-15ubuntu1) ... 275s Setting up libglew2.2:arm64 (2.2.0-4) ... 275s Setting up libnetcdf19:arm64 (1:4.9.2-3ubuntu1) ... 275s Setting up libhsa-runtime64-1 (5.7.1-1) ... 275s Setting up libtheora0:arm64 (1.1.1+dfsg.1-16.1) ... 275s Setting up libgl2ps1.4 (1.4.2+dfsg1-2) ... 275s Setting up gfortran-12 (12.3.0-15ubuntu1) ... 275s Setting up libamdhip64-5 (5.2.3-12) ... 275s Setting up libucx0:arm64 (1.16.0+ds-4) ... 275s Setting up libopenmpi3:arm64 (4.1.6-5ubuntu1) ... 275s Setting up libkim-api2:arm64 (2.3.0-1) ... 275s Setting up libvtk9.1:arm64 (9.1.0+really9.1.0+dfsg2-7build1) ... 275s Setting up libpnetcdf0d:arm64 (1.12.3-2) ... 275s Setting up openmpi-bin (4.1.6-5ubuntu1) ... 275s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 275s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 275s Setting up mpi-default-bin (1.15) ... 275s Setting up liblammps0:arm64 (20240207+dfsg-1) ... 275s Setting up lammps (20240207+dfsg-1) ... 275s Setting up autopkgtest-satdep (0) ... 275s Processing triggers for man-db (2.12.0-3) ... 276s Processing triggers for libc-bin (2.39-0ubuntu2) ... 284s (Reading database ... 78927 files and directories currently installed.) 284s Removing autopkgtest-satdep (0) ... 285s autopkgtest [11:33:30]: test crack: [----------------------- 288s LAMMPS (7 Feb 2024 - Update 1) 288s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 288s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 288s using 1 OpenMP thread(s) per MPI task 288s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 288s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 288s 2 by 1 by 1 MPI processor grid 288s Created 8141 atoms 288s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 288s create_atoms CPU = 0.002 seconds 288s 302 atoms in group lower 288s 302 atoms in group upper 288s 604 atoms in group boundary 288s 7537 atoms in group mobile 288s 841 atoms in group leftupper 288s 841 atoms in group leftlower 288s Setting atom values ... 288s 841 settings made for type 288s Setting atom values ... 288s 841 settings made for type 288s Setting atom values ... 288s 302 settings made for type 288s Setting atom values ... 288s 302 settings made for type 288s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 288s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 288s Neighbor list info ... 288s update: every = 1 steps, delay = 5 steps, check = yes 288s max neighbors/atom: 2000, page size: 100000 288s master list distance cutoff = 2.8 288s ghost atom cutoff = 2.8 288s binsize = 1.4, bins = 80 56 1 288s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 288s (1) pair lj/cut, perpetual 288s attributes: half, newton on 288s pair build: half/bin/atomonly/newton 288s stencil: half/bin/2d 288s bin: standard 288s Setting up Verlet run ... 288s Unit style : lj 288s Current step : 0 288s Time step : 0.003 288s Per MPI rank memory allocation (min/avg/max) = 3.097 | 3.097 | 3.097 Mbytes 288s Step Temp E_pair E_mol TotEng Press Volume 288s 0 0.065993465 -3.2595015 0 -3.1984123 -0.035939913 8605.5917 288s 200 0.060035253 -3.2531886 0 -3.1976149 -0.22757684 8638.5331 288s 400 0.06054278 -3.2510706 0 -3.1950271 -0.42811733 8677.8288 288s 600 0.060576995 -3.246816 0 -3.1907408 -0.60017647 8717.6131 288s 800 0.060802753 -3.2413477 0 -3.1850635 -0.74499308 8756.4512 289s 1000 0.061812114 -3.2349942 0 -3.1777756 -0.87130079 8796.9575 289s 1200 0.06317147 -3.2277552 0 -3.1692783 -0.98010628 8823.1488 289s 1400 0.065125405 -3.2198031 0 -3.1595175 -1.0690179 8858.8358 289s 1600 0.06725411 -3.2111272 0 -3.148871 -1.1440993 8892.6607 289s 1800 0.069389572 -3.2019689 0 -3.137736 -1.199078 8933.7591 289s 2000 0.071276448 -3.1921621 0 -3.1261826 -1.239553 8969.0463 289s 2200 0.073243486 -3.1818809 0 -3.1140805 -1.264839 8997.6559 289s 2400 0.075063494 -3.1711703 0 -3.1016851 -1.2772278 9038.4932 290s 2600 0.076789207 -3.1600658 0 -3.0889832 -1.2754953 9073.4997 290s 2800 0.07875979 -3.1487143 0 -3.0758075 -1.2637926 9106.2245 290s 3000 0.080591853 -3.1372361 0 -3.0626334 -1.2388824 9142.7862 290s 3200 0.08227693 -3.125423 0 -3.0492605 -1.2055283 9169.4322 290s 3400 0.084289444 -3.1136554 0 -3.03563 -1.1672422 9204.8205 290s 3600 0.086720297 -3.1021183 0 -3.0218427 -1.126381 9233.2656 291s 3800 0.089264018 -3.0909262 0 -3.0082959 -1.0899774 9265.4143 291s 4000 0.091377688 -3.0795096 0 -2.9949227 -1.0580229 9297.6799 291s 4200 0.092665135 -3.0678736 0 -2.9820949 -1.0390124 9331.6135 291s 4400 0.09055434 -3.0560482 0 -2.9722234 -1.0323741 9362.2075 292s 4600 0.088763719 -3.0446018 0 -2.9624346 -1.027693 9391.6949 292s 4800 0.089467982 -3.0337452 0 -2.950926 -1.0232092 9427.4155 292s 5000 0.089910902 -3.0237571 0 -2.9405279 -1.0174796 9452.031 292s Loop time of 3.93918 on 2 procs for 5000 steps with 8141 atoms 292s 292s Performance: 329002.812 tau/day, 1269.301 timesteps/s, 10.333 Matom-step/s 292s 89.1% CPU use with 2 MPI tasks x 1 OpenMP threads 292s 292s MPI task timing breakdown: 292s Section | min time | avg time | max time |%varavg| %total 292s --------------------------------------------------------------- 292s Pair | 2.3233 | 2.4705 | 2.6178 | 9.4 | 62.72 292s Neigh | 0.099474 | 0.10278 | 0.10609 | 1.0 | 2.61 292s Comm | 0.49868 | 0.63243 | 0.76618 | 16.8 | 16.05 292s Output | 0.044712 | 0.082483 | 0.12025 | 13.2 | 2.09 292s Modify | 0.22698 | 0.22846 | 0.22993 | 0.3 | 5.80 292s Other | | 0.4225 | | | 10.73 292s 292s Nlocal: 4070.5 ave 4085 max 4056 min 292s Histogram: 1 0 0 0 0 0 0 0 0 1 292s Nghost: 207 ave 208 max 206 min 292s Histogram: 1 0 0 0 0 0 0 0 0 1 292s Neighs: 35700 ave 35927 max 35473 min 292s Histogram: 1 0 0 0 0 0 0 0 0 1 292s 292s Total # of neighbors = 71400 292s Ave neighs/atom = 8.7704213 292s Neighbor list builds = 106 292s Dangerous builds = 0 292s Total wall time: 0:00:04 295s LAMMPS (7 Feb 2024 - Update 1) 300s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 300s using 1 OpenMP thread(s) per MPI task 300s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 300s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 300s 1 by 1 by 1 MPI processor grid 300s Created 8141 atoms 300s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 300s create_atoms CPU = 0.002 seconds 300s 302 atoms in group lower 300s 302 atoms in group upper 300s 604 atoms in group boundary 300s 7537 atoms in group mobile 300s 841 atoms in group leftupper 300s 841 atoms in group leftlower 300s Setting atom values ... 300s 841 settings made for type 300s Setting atom values ... 300s 841 settings made for type 300s Setting atom values ... 300s 302 settings made for type 300s Setting atom values ... 300s 302 settings made for type 300s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 300s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 300s Neighbor list info ... 300s update: every = 1 steps, delay = 5 steps, check = yes 300s max neighbors/atom: 2000, page size: 100000 300s master list distance cutoff = 2.8 300s ghost atom cutoff = 2.8 300s binsize = 1.4, bins = 80 56 1 300s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 300s (1) pair lj/cut, perpetual 300s attributes: half, newton on 300s pair build: half/bin/atomonly/newton 300s stencil: half/bin/2d 300s bin: standard 300s Setting up Verlet run ... 300s Unit style : lj 300s Current step : 0 300s Time step : 0.003 300s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 300s Step Temp E_pair E_mol TotEng Press Volume 300s 0 0.065651733 -3.2595015 0 -3.1987287 -0.036239172 8605.5917 300s 200 0.060086376 -3.2531936 0 -3.1975725 -0.23125026 8638.8101 300s 400 0.060533553 -3.2509973 0 -3.1949623 -0.4305406 8679.2464 300s 600 0.06082965 -3.2466949 0 -3.1903858 -0.6028531 8716.7569 300s 800 0.061677224 -3.2413215 0 -3.1842278 -0.7482749 8756.226 300s 1000 0.062383731 -3.2349273 0 -3.1771796 -0.87425132 8793.1116 300s 1200 0.063709246 -3.2276094 0 -3.1686347 -0.98020161 8828.8863 300s 1400 0.065404552 -3.2196608 0 -3.1591168 -1.0695384 8866.4893 300s 1600 0.067579602 -3.2110378 0 -3.1484804 -1.1456387 8900.6772 300s 1800 0.069324241 -3.2018536 0 -3.1376812 -1.2020999 8933.017 300s 2000 0.071014927 -3.1921108 0 -3.1263733 -1.2430105 8963.9853 300s 2200 0.072992881 -3.1818701 0 -3.1143017 -1.2701297 9004.4136 300s 2400 0.075000723 -3.1712313 0 -3.1018043 -1.2830866 9034.9991 300s 2600 0.076843477 -3.1601004 0 -3.0889675 -1.27924 9072.1325 300s 2800 0.078671706 -3.1487747 0 -3.0759495 -1.2659604 9103.9526 300s 3000 0.080713586 -3.1373277 0 -3.0626123 -1.2440673 9134.552 300s 3200 0.08309469 -3.1260242 0 -3.0491047 -1.214547 9169.0003 300s 3400 0.085424766 -3.1146623 0 -3.0355859 -1.1839326 9206.909 300s 3600 0.087396485 -3.1029493 0 -3.0220477 -1.143412 9233.783 300s 3800 0.089007987 -3.090822 0 -3.0084286 -1.1000791 9259.0348 300s 4000 0.089813071 -3.0794078 0 -2.9962692 -1.062847 9281.82 300s 4200 0.08584753 -3.0668559 0 -2.9873882 -1.037972 9308.8113 300s 4400 0.086197517 -3.0559678 0 -2.9761761 -1.028843 9328.9666 302s 4600 0.086766447 -3.0437627 0 -2.9634443 -1.0208785 9361.9925 302s 4800 0.088195149 -3.0328502 0 -2.9512093 -1.0272063 9395.6122 302s 5000 0.089415266 -3.0228825 0 -2.9401122 -1.0215336 9436.1637 302s Loop time of 5.30586 on 1 procs for 5000 steps with 8141 atoms 302s 302s Performance: 244258.452 tau/day, 942.355 timesteps/s, 7.672 Matom-step/s 302s 99.3% CPU use with 1 MPI tasks x 1 OpenMP threads 302s 302s MPI task timing breakdown: 302s Section | min time | avg time | max time |%varavg| %total 302s --------------------------------------------------------------- 302s Pair | 4.4627 | 4.4627 | 4.4627 | 0.0 | 84.11 302s Neigh | 0.18932 | 0.18932 | 0.18932 | 0.0 | 3.57 302s Comm | 0.0040176 | 0.0040176 | 0.0040176 | 0.0 | 0.08 302s Output | 0.031252 | 0.031252 | 0.031252 | 0.0 | 0.59 302s Modify | 0.43733 | 0.43733 | 0.43733 | 0.0 | 8.24 302s Other | | 0.1812 | | | 3.42 302s 302s Nlocal: 8141 ave 8141 max 8141 min 302s Histogram: 1 0 0 0 0 0 0 0 0 0 302s Nghost: 0 ave 0 max 0 min 302s Histogram: 1 0 0 0 0 0 0 0 0 0 302s Neighs: 71389 ave 71389 max 71389 min 302s Histogram: 1 0 0 0 0 0 0 0 0 0 302s 302s Total # of neighbors = 71389 302s Ave neighs/atom = 8.7690701 302s Neighbor list builds = 100 302s Dangerous builds = 0 302s Total wall time: 0:00:05 302s run: OK 303s autopkgtest [11:33:48]: test crack: -----------------------] 304s crack PASS 304s autopkgtest [11:33:49]: test crack: - - - - - - - - - - results - - - - - - - - - - 304s autopkgtest [11:33:49]: test dipole: preparing testbed 306s Reading package lists... 307s Building dependency tree... 307s Reading state information... 308s Starting pkgProblemResolver with broken count: 0 308s Starting 2 pkgProblemResolver with broken count: 0 308s Done 309s The following NEW packages will be installed: 309s autopkgtest-satdep 309s 0 upgraded, 1 newly installed, 0 to remove and 4 not upgraded. 309s Need to get 0 B/708 B of archives. 309s After this operation, 0 B of additional disk space will be used. 309s Get:1 /tmp/autopkgtest.1kosEq/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B] 310s Selecting previously unselected package autopkgtest-satdep. 310s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78927 files and directories currently installed.) 310s Preparing to unpack .../2-autopkgtest-satdep.deb ... 310s Unpacking autopkgtest-satdep (0) ... 310s Setting up autopkgtest-satdep (0) ... 313s (Reading database ... 78927 files and directories currently installed.) 313s Removing autopkgtest-satdep (0) ... 315s autopkgtest [11:33:59]: test dipole: [----------------------- 316s LAMMPS (7 Feb 2024 - Update 1) 316s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 316s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 316s using 1 OpenMP thread(s) per MPI task 316s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 316s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 316s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 316s 2 by 1 by 1 MPI processor grid 316s Created 200 atoms 316s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 316s create_atoms CPU = 0.001 seconds 316s Setting atom values ... 316s 200 settings made for mass 316s Setting atom values ... 316s 200 settings made for dipole/random 316s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 316s Neighbor list info ... 316s update: every = 1 steps, delay = 0 steps, check = yes 316s max neighbors/atom: 2000, page size: 100000 316s master list distance cutoff = 2.8 316s ghost atom cutoff = 2.8 316s binsize = 1.4, bins = 13 13 2 316s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 316s (1) pair lj/cut/dipole/cut, perpetual 316s attributes: half, newton on 316s pair build: half/bin/atomonly/newton 316s stencil: half/bin/2d 316s bin: standard 316s Setting up Verlet run ... 316s Unit style : lj 316s Current step : 0 316s Time step : 0.005 316s Per MPI rank memory allocation (min/avg/max) = 5.049 | 5.049 | 5.049 Mbytes 316s Step Temp E_pair c_erot TotEng Press 316s 0 0 -2.0965715 0 -2.0965715 -2.4759659 316s 500 0.37155664 -2.7150631 0.22689419 -2.3453642 -0.33510922 316s 1000 0.42354552 -2.749888 0.21162528 -2.3284602 -0.11120147 316s 1500 0.39778312 -2.7597475 0.24737266 -2.3639533 -0.33856086 316s 2000 0.44906518 -2.8037483 0.24422519 -2.3569284 0.15010152 316s 2500 0.46056435 -2.8144144 0.25015831 -2.3561529 -0.38358808 316s 3000 0.4348415 -2.7856362 0.24988108 -2.3529689 0.086257242 316s 3500 0.41528069 -2.7415634 0.22418981 -2.3283591 0.13066802 316s 4000 0.40006774 -2.7153553 0.22170678 -2.3172879 -0.17425321 316s 4500 0.45764976 -2.7751555 0.2288386 -2.319794 -0.22228559 316s 5000 0.45119236 -2.7437941 0.21642728 -2.2948577 0.086840364 316s 5500 0.41805158 -2.7191643 0.2405108 -2.303203 -0.20373032 316s 6000 0.41353959 -2.73374 0.26555768 -2.3222681 0.013197521 316s 6500 0.46952638 -2.7206692 0.19356607 -2.2534905 -0.32099423 317s 7000 0.4308564 -2.6963241 0.21298331 -2.2676219 0.11638995 317s 7500 0.44328381 -2.767933 0.28845767 -2.3268656 -0.055714929 317s 8000 0.48149201 -2.7648936 0.25607634 -2.2858091 -0.24833472 317s 8500 0.44641155 -2.735761 0.26866772 -2.2915815 -0.11006786 317s 9000 0.45443104 -2.70388 0.2307522 -2.2517211 -0.077100374 317s 9500 0.42544663 -2.6959692 0.25023057 -2.2726498 -0.04183171 317s 10000 0.42622279 -2.6434464 0.2125908 -2.2193547 0.052056849 317s Loop time of 0.570892 on 2 procs for 10000 steps with 200 atoms 317s 317s Performance: 7567098.984 tau/day, 17516.433 timesteps/s, 3.503 Matom-step/s 317s 96.0% CPU use with 2 MPI tasks x 1 OpenMP threads 317s 317s MPI task timing breakdown: 317s Section | min time | avg time | max time |%varavg| %total 317s --------------------------------------------------------------- 317s Pair | 0.2443 | 0.28134 | 0.31839 | 7.0 | 49.28 317s Neigh | 0.014425 | 0.015625 | 0.016824 | 1.0 | 2.74 317s Comm | 0.17152 | 0.20923 | 0.24695 | 8.2 | 36.65 317s Output | 0.00044337 | 0.0056162 | 0.010789 | 6.9 | 0.98 317s Modify | 0.026436 | 0.029269 | 0.032102 | 1.7 | 5.13 317s Other | | 0.0298 | | | 5.22 317s 317s Nlocal: 100 ave 104 max 96 min 317s Histogram: 1 0 0 0 0 0 0 0 0 1 317s Nghost: 123.5 ave 124 max 123 min 317s Histogram: 1 0 0 0 0 0 0 0 0 1 317s Neighs: 820 ave 885 max 755 min 317s Histogram: 1 0 0 0 0 0 0 0 0 1 317s 317s Total # of neighbors = 1640 317s Ave neighs/atom = 8.2 317s Neighbor list builds = 697 317s Dangerous builds = 0 317s Total wall time: 0:00:00 318s LAMMPS (7 Feb 2024 - Update 1) 319s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 319s using 1 OpenMP thread(s) per MPI task 319s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 319s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 319s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 319s 1 by 1 by 1 MPI processor grid 319s Created 200 atoms 319s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 319s create_atoms CPU = 0.001 seconds 319s Setting atom values ... 319s 200 settings made for mass 319s Setting atom values ... 319s 200 settings made for dipole/random 319s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 319s Neighbor list info ... 319s update: every = 1 steps, delay = 0 steps, check = yes 319s max neighbors/atom: 2000, page size: 100000 319s master list distance cutoff = 2.8 319s ghost atom cutoff = 2.8 319s binsize = 1.4, bins = 13 13 2 319s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 319s (1) pair lj/cut/dipole/cut, perpetual 319s attributes: half, newton on 319s pair build: half/bin/atomonly/newton 319s stencil: half/bin/2d 319s bin: standard 319s Setting up Verlet run ... 319s Unit style : lj 319s Current step : 0 319s Time step : 0.005 319s Per MPI rank memory allocation (min/avg/max) = 5.05 | 5.05 | 5.05 Mbytes 319s Step Temp E_pair c_erot TotEng Press 319s 0 0 -2.0965715 0 -2.0965715 -2.4759659 319s 500 0.37155664 -2.7150631 0.22689419 -2.3453642 -0.33510922 319s 1000 0.42354552 -2.749888 0.21162528 -2.3284602 -0.11120147 319s 1500 0.39778312 -2.7597475 0.24737266 -2.3639533 -0.33856087 319s 2000 0.44906137 -2.8037446 0.24422529 -2.3569285 0.15012276 319s 2500 0.46036094 -2.8144628 0.25011505 -2.3564037 -0.37955581 319s 3000 0.44916796 -2.7986738 0.24197589 -2.3517517 -0.23759595 319s 3500 0.43708892 -2.7404913 0.20046667 -2.3055878 -0.068108938 319s 4000 0.4277424 -2.7516171 0.22285533 -2.3260134 -0.38856067 319s 4500 0.41051154 -2.7253155 0.22244047 -2.3168566 -0.56435269 319s 5000 0.3930005 -2.7393881 0.26645487 -2.3483526 -0.14501759 319s 5500 0.48374634 -2.7361451 0.17785357 -2.2548175 -0.23588662 319s 6000 0.44341889 -2.7200909 0.2049925 -2.2788891 0.30169398 319s 6500 0.45604374 -2.7449044 0.23816385 -2.2911408 -0.02615159 319s 7000 0.41178901 -2.7023053 0.24691126 -2.2925752 -0.089298567 319s 7500 0.49214202 -2.7631906 0.22991178 -2.2735093 -0.21670068 319s 8000 0.51272822 -2.7861027 0.23867667 -2.2759381 -0.054576195 319s 8500 0.3942697 -2.6555823 0.23621182 -2.263284 -0.15323416 319s 9000 0.44393797 -2.7051517 0.23305036 -2.2634334 -0.32144821 319s 9500 0.49155958 -2.757627 0.23397146 -2.2685252 0.083278026 319s 10000 0.49343489 -2.7193593 0.19771681 -2.2283916 -0.10873755 319s Loop time of 0.714527 on 1 procs for 10000 steps with 200 atoms 319s 319s Performance: 6045957.743 tau/day, 13995.273 timesteps/s, 2.799 Matom-step/s 319s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads 319s 319s MPI task timing breakdown: 319s Section | min time | avg time | max time |%varavg| %total 319s --------------------------------------------------------------- 319s Pair | 0.55113 | 0.55113 | 0.55113 | 0.0 | 77.13 319s Neigh | 0.031118 | 0.031118 | 0.031118 | 0.0 | 4.35 319s Comm | 0.050351 | 0.050351 | 0.050351 | 0.0 | 7.05 319s Output | 0.00029476 | 0.00029476 | 0.00029476 | 0.0 | 0.04 319s Modify | 0.059805 | 0.059805 | 0.059805 | 0.0 | 8.37 319s Other | | 0.02183 | | | 3.06 319s 319s Nlocal: 200 ave 200 max 200 min 319s Histogram: 1 0 0 0 0 0 0 0 0 0 319s Nghost: 155 ave 155 max 155 min 319s Histogram: 1 0 0 0 0 0 0 0 0 0 319s Neighs: 1664 ave 1664 max 1664 min 319s Histogram: 1 0 0 0 0 0 0 0 0 0 319s 319s Total # of neighbors = 1664 319s Ave neighs/atom = 8.32 319s Neighbor list builds = 697 319s Dangerous builds = 0 319s Total wall time: 0:00:00 319s run: OK 320s autopkgtest [11:34:05]: test dipole: -----------------------] 320s dipole PASS 320s autopkgtest [11:34:05]: test dipole: - - - - - - - - - - results - - - - - - - - - - 321s autopkgtest [11:34:06]: test ellipse: preparing testbed 322s Reading package lists... 323s Building dependency tree... 323s Reading state information... 323s Starting pkgProblemResolver with broken count: 0 323s Starting 2 pkgProblemResolver with broken count: 0 323s Done 324s The following NEW packages will be installed: 324s autopkgtest-satdep 324s 0 upgraded, 1 newly installed, 0 to remove and 4 not upgraded. 324s Need to get 0 B/704 B of archives. 324s After this operation, 0 B of additional disk space will be used. 324s Get:1 /tmp/autopkgtest.1kosEq/3-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [704 B] 325s Selecting previously unselected package autopkgtest-satdep. 326s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78927 files and directories currently installed.) 326s Preparing to unpack .../3-autopkgtest-satdep.deb ... 326s Unpacking autopkgtest-satdep (0) ... 326s Setting up autopkgtest-satdep (0) ... 331s (Reading database ... 78927 files and directories currently installed.) 331s Removing autopkgtest-satdep (0) ... 332s autopkgtest [11:34:17]: test ellipse: [----------------------- 334s LAMMPS (7 Feb 2024 - Update 1) 334s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 334s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 334s using 1 OpenMP thread(s) per MPI task 334s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 334s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 334s 2 by 1 by 1 MPI processor grid 334s Created 400 atoms 334s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 334s create_atoms CPU = 0.001 seconds 334s Setting atom values ... 334s 29 settings made for type/fraction 334s Setting atom values ... 334s 371 settings made for mass 334s Setting atom values ... 334s 29 settings made for mass 334s Setting atom values ... 334s 371 settings made for shape 334s Setting atom values ... 334s 29 settings made for shape 334s Setting atom values ... 334s 400 settings made for quat/random 334s 371 atoms in group spheroid 334s 334s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 334s 334s Your simulation uses code contributions which should be cited: 334s - pair gayberne command: doi:10.1063/1.3058435 334s The log file lists these citations in BibTeX format. 334s 334s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 334s 334s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 334s Neighbor list info ... 334s update: every = 1 steps, delay = 0 steps, check = yes 334s max neighbors/atom: 2000, page size: 100000 334s master list distance cutoff = 4.8 334s ghost atom cutoff = 4.8 334s binsize = 2.4, bins = 59 59 3 334s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 334s (1) pair gayberne, perpetual 334s attributes: half, newton on 334s pair build: half/bin/atomonly/newton 334s stencil: half/bin/2d 334s bin: standard 334s Setting up Verlet run ... 334s Unit style : lj 334s Current step : 0 334s Time step : 0.002 334s Per MPI rank memory allocation (min/avg/max) = 4.744 | 4.744 | 4.744 Mbytes 334s Step c_rot E_pair TotEng Press Volume 334s 0 2.3158404 0 2.394 0.04788 20000 334s 100 1.7101139 0 1.7678302 0.034413192 20548.286 334s 200 2.3115592 0 2.3895743 0.04649702 20556.796 334s 300 1.831333 0 1.8931405 0.041256922 18354.646 334s 400 2.1838099 -0.00017499954 2.2573384 0.066506278 13574.023 334s 500 1.9604824 -0.024753591 2.0018228 0.09726581 8392.5882 334s 600 1.983652 -0.13957983 1.858954 0.28044314 4590.4733 334s 700 2.0349282 -0.7537042 1.2545559 0.45904399 2452.437 334s 800 2.1883376 -1.7033514 0.37402366 1.4284826 1377.0458 334s 900 1.8893439 -3.2012297 -1.3190748 3.1235376 889.49388 334s 1000 1.5818588 -4.6980931 -3.1320854 3.6494701 700.71079 334s 1100 1.743968 -5.3117051 -3.573368 1.7907876 666.1204 334s 1200 2.1788951 -5.0690852 -2.8893841 1.0317884 697.08645 334s 1300 2.0067166 -4.6588703 -2.6387448 -0.19855863 763.72651 334s 1400 2.1020191 -4.2786372 -2.1756186 0.5410189 815.37712 334s 1500 1.805494 -4.1713612 -2.3732785 0.88817983 855.41486 334s 1600 2.1414975 -3.9792878 -1.8690882 0.79530679 899.00645 334s 1700 1.9971755 -3.8166601 -1.8380659 0.41343091 945.60821 334s 1800 2.0033499 -3.7524192 -1.7481879 0.76104974 973.71402 334s 1900 2.0083456 -3.7603247 -1.7442111 0.74095065 988.03964 334s 2000 1.952518 -3.6531717 -1.7078819 0.50248125 989.96894 334s Loop time of 0.370879 on 2 procs for 2000 steps with 400 atoms 334s 334s Performance: 931841.507 tau/day, 5392.601 timesteps/s, 2.157 Matom-step/s 334s 99.3% CPU use with 2 MPI tasks x 1 OpenMP threads 334s 334s MPI task timing breakdown: 334s Section | min time | avg time | max time |%varavg| %total 334s --------------------------------------------------------------- 334s Pair | 0.16679 | 0.18725 | 0.20771 | 4.7 | 50.49 334s Neigh | 0.010155 | 0.010204 | 0.010254 | 0.0 | 2.75 334s Comm | 0.042875 | 0.063233 | 0.083592 | 8.1 | 17.05 334s Output | 0.015585 | 0.015757 | 0.015928 | 0.1 | 4.25 334s Modify | 0.084146 | 0.085 | 0.085854 | 0.3 | 22.92 334s Other | | 0.009433 | | | 2.54 334s 334s Nlocal: 200 ave 211 max 189 min 334s Histogram: 1 0 0 0 0 0 0 0 0 1 334s Nghost: 215 ave 217 max 213 min 334s Histogram: 1 0 0 0 0 0 0 0 0 1 334s Neighs: 1561 ave 1651 max 1471 min 334s Histogram: 1 0 0 0 0 0 0 0 0 1 334s 334s Total # of neighbors = 3122 334s Ave neighs/atom = 7.805 334s Neighbor list builds = 346 334s Dangerous builds = 0 334s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 334s Setting up Verlet run ... 334s Unit style : lj 334s Current step : 2000 334s Time step : 0.002 334s Per MPI rank memory allocation (min/avg/max) = 6.899 | 6.899 | 6.899 Mbytes 334s Step c_rot E_pair TotEng Press Volume 334s 2000 1.952518 -3.6531717 -1.7078819 0.50248125 989.96894 334s 2100 1.9040485 -3.6005672 -1.6802923 0.39862439 989.96894 334s 2200 1.8951971 -3.5921565 -1.6947174 1.0260215 989.96894 334s 2300 2.0029242 -3.7081932 -1.6838651 0.66970247 989.96894 334s 2400 2.0271892 -3.7314226 -1.7100026 0.89700311 989.96894 334s 2500 2.0661249 -3.7753498 -1.7024133 0.57670823 989.96894 334s 2600 2.0610735 -3.7707906 -1.7111976 0.90913324 989.96894 334s 2700 2.0505182 -3.759913 -1.7337449 0.65661806 989.96894 334s 2800 2.1106611 -3.8219493 -1.7370736 0.55275858 989.96894 334s 2900 2.0346954 -3.7427335 -1.7135138 0.69791414 989.96894 334s 3000 2.0331857 -3.7398391 -1.751581 0.051416398 989.96894 334s 3100 1.9983775 -3.7074162 -1.7156494 0.75643227 989.96894 334s 3200 2.1297315 -3.8450391 -1.7173438 1.0595574 989.96894 334s 3300 2.0798058 -3.793496 -1.6857257 1.1572151 989.96894 334s 3400 2.1441179 -3.8596018 -1.7011723 0.61261295 989.96894 334s 3500 2.1035108 -3.8190033 -1.6997662 0.99653756 989.96894 335s 3600 2.0856923 -3.7988484 -1.7184312 1.1264485 989.96894 335s 3700 2.1029212 -3.8148833 -1.7096948 0.96828131 989.96894 335s 3800 2.0253659 -3.7349822 -1.7382292 0.56254829 989.96894 335s 3900 1.9686055 -3.6775217 -1.7283017 1.2472863 989.96894 335s 4000 2.0951026 -3.8095594 -1.6876041 0.79798093 989.96894 335s Loop time of 0.375717 on 2 procs for 2000 steps with 400 atoms 335s 335s Performance: 919841.621 tau/day, 5323.158 timesteps/s, 2.129 Matom-step/s 335s 99.3% CPU use with 2 MPI tasks x 1 OpenMP threads 335s 335s MPI task timing breakdown: 335s Section | min time | avg time | max time |%varavg| %total 335s --------------------------------------------------------------- 335s Pair | 0.24047 | 0.24443 | 0.24838 | 0.8 | 65.06 335s Neigh | 0.0025325 | 0.0028395 | 0.0031465 | 0.6 | 0.76 335s Comm | 0.043398 | 0.047011 | 0.050625 | 1.7 | 12.51 335s Output | 0.015852 | 0.016048 | 0.016244 | 0.2 | 4.27 335s Modify | 0.03718 | 0.041483 | 0.045786 | 2.1 | 11.04 335s Other | | 0.02391 | | | 6.36 335s 335s Nlocal: 200 ave 227 max 173 min 335s Histogram: 1 0 0 0 0 0 0 0 0 1 335s Nghost: 211 ave 219 max 203 min 335s Histogram: 1 0 0 0 0 0 0 0 0 1 335s Neighs: 1650.5 ave 1950 max 1351 min 335s Histogram: 1 0 0 0 0 0 0 0 0 1 335s 335s Total # of neighbors = 3301 335s Ave neighs/atom = 8.2525 335s Neighbor list builds = 49 335s Dangerous builds = 0 335s Total wall time: 0:00:00 337s LAMMPS (7 Feb 2024 - Update 1) 338s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 338s using 1 OpenMP thread(s) per MPI task 338s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 338s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 338s 1 by 1 by 1 MPI processor grid 338s Created 400 atoms 338s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 338s create_atoms CPU = 0.001 seconds 338s Setting atom values ... 338s 29 settings made for type/fraction 338s Setting atom values ... 338s 371 settings made for mass 338s Setting atom values ... 338s 29 settings made for mass 338s Setting atom values ... 338s 371 settings made for shape 338s Setting atom values ... 338s 29 settings made for shape 338s Setting atom values ... 338s 400 settings made for quat/random 338s 371 atoms in group spheroid 338s 338s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 338s 338s Your simulation uses code contributions which should be cited: 338s - pair gayberne command: doi:10.1063/1.3058435 338s The log file lists these citations in BibTeX format. 338s 338s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 338s 338s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 338s Neighbor list info ... 338s update: every = 1 steps, delay = 0 steps, check = yes 338s max neighbors/atom: 2000, page size: 100000 338s master list distance cutoff = 4.8 338s ghost atom cutoff = 4.8 338s binsize = 2.4, bins = 59 59 3 338s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 338s (1) pair gayberne, perpetual 338s attributes: half, newton on 338s pair build: half/bin/atomonly/newton 338s stencil: half/bin/2d 338s bin: standard 338s Setting up Verlet run ... 338s Unit style : lj 338s Current step : 0 338s Time step : 0.002 338s Per MPI rank memory allocation (min/avg/max) = 4.753 | 4.753 | 4.753 Mbytes 338s Step c_rot E_pair TotEng Press Volume 338s 0 2.3158404 0 2.394 0.04788 20000 338s 100 1.7101139 0 1.7678302 0.034413192 20548.286 338s 200 2.3115592 0 2.3895743 0.04649702 20556.796 338s 300 1.831333 0 1.8931405 0.041256922 18354.646 338s 400 2.1838099 -0.00017499954 2.2573384 0.066506278 13574.023 338s 500 1.9604824 -0.024753591 2.0018228 0.09726581 8392.5882 338s 600 1.983652 -0.13957983 1.858954 0.28044314 4590.4733 338s 700 2.0349282 -0.7537042 1.2545559 0.45904399 2452.437 338s 800 2.1883376 -1.7033514 0.37402366 1.4284826 1377.0458 338s 900 1.8893439 -3.2012297 -1.3190748 3.1235376 889.49388 338s 1000 1.5818588 -4.6980931 -3.1320854 3.6494701 700.71079 338s 1100 1.743968 -5.3117051 -3.573368 1.7907876 666.1204 338s 1200 2.1788951 -5.0690852 -2.8893841 1.0317884 697.08645 338s 1300 2.0067166 -4.6588703 -2.6387448 -0.19855863 763.72651 338s 1400 2.1020191 -4.2786372 -2.1756186 0.5410189 815.37712 338s 1500 1.805494 -4.1713612 -2.3732785 0.88817983 855.41486 338s 1600 2.1414975 -3.9792878 -1.8690882 0.79530679 899.00645 338s 1700 1.9971755 -3.8166601 -1.8380659 0.41343092 945.60821 338s 1800 2.0033499 -3.7524192 -1.7481879 0.76104975 973.71402 338s 1900 2.0083456 -3.7603247 -1.7442111 0.74095064 988.03964 338s 2000 1.952518 -3.6531717 -1.7078819 0.50248128 989.96894 338s Loop time of 0.567065 on 1 procs for 2000 steps with 400 atoms 338s 338s Performance: 609453.593 tau/day, 3526.931 timesteps/s, 1.411 Matom-step/s 338s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 338s 338s MPI task timing breakdown: 338s Section | min time | avg time | max time |%varavg| %total 338s --------------------------------------------------------------- 338s Pair | 0.37233 | 0.37233 | 0.37233 | 0.0 | 65.66 339s Neigh | 0.020028 | 0.020028 | 0.020028 | 0.0 | 3.53 339s Comm | 0.012223 | 0.012223 | 0.012223 | 0.0 | 2.16 339s Output | 0.019783 | 0.019783 | 0.019783 | 0.0 | 3.49 339s Modify | 0.13622 | 0.13622 | 0.13622 | 0.0 | 24.02 339s Other | | 0.006483 | | | 1.14 339s 339s Nlocal: 400 ave 400 max 400 min 339s Histogram: 1 0 0 0 0 0 0 0 0 0 339s Nghost: 276 ave 276 max 276 min 339s Histogram: 1 0 0 0 0 0 0 0 0 0 339s Neighs: 3122 ave 3122 max 3122 min 339s Histogram: 1 0 0 0 0 0 0 0 0 0 339s 339s Total # of neighbors = 3122 339s Ave neighs/atom = 7.805 339s Neighbor list builds = 346 339s Dangerous builds = 0 339s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 339s Setting up Verlet run ... 339s Unit style : lj 339s Current step : 2000 339s Time step : 0.002 339s Per MPI rank memory allocation (min/avg/max) = 6.926 | 6.926 | 6.926 Mbytes 339s Step c_rot E_pair TotEng Press Volume 339s 2000 1.952518 -3.6531717 -1.7078819 0.50248128 989.96894 339s 2100 1.9040485 -3.6005672 -1.6802923 0.39862438 989.96894 339s 2200 1.8951971 -3.5921566 -1.6947174 1.0260215 989.96894 339s 2300 2.0029244 -3.7081934 -1.6838652 0.66970135 989.96894 339s 2400 2.0271885 -3.731422 -1.7100022 0.89700608 989.96894 339s 2500 2.066122 -3.7753468 -1.7024127 0.57671483 989.96894 339s 2600 2.0610701 -3.7707871 -1.7111979 0.90915268 989.96894 339s 2700 2.0505226 -3.7599192 -1.7337496 0.65661546 989.96894 339s 2800 2.1106391 -3.8219307 -1.7370733 0.55280503 989.96894 339s 2900 2.0347598 -3.7428025 -1.7135189 0.69781833 989.96894 339s 3000 2.0330208 -3.7396616 -1.7515118 0.052338568 989.96894 339s 3100 1.9979524 -3.7070895 -1.715955 0.75689837 989.96894 339s 3200 2.1279004 -3.8431144 -1.7172074 1.0681978 989.96894 339s 3300 2.0795122 -3.7933999 -1.6843677 1.160141 989.96894 339s 3400 2.1458506 -3.8618217 -1.7011471 0.60302387 989.96894 339s 3500 2.0922186 -3.8066733 -1.7042032 1.020929 989.96894 339s 3600 2.0923687 -3.8049721 -1.7151823 0.97720853 989.96894 339s 3700 2.1082732 -3.8201734 -1.6945215 0.97495003 989.96894 339s 3800 2.0883146 -3.8011237 -1.6897726 0.59373082 989.96894 339s 3900 2.1821449 -3.8971145 -1.6976484 0.53241288 989.96894 339s 4000 2.103916 -3.8154046 -1.6865256 0.96939819 989.96894 339s Loop time of 0.619595 on 1 procs for 2000 steps with 400 atoms 339s 339s Performance: 557783.802 tau/day, 3227.916 timesteps/s, 1.291 Matom-step/s 339s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 339s 339s MPI task timing breakdown: 339s Section | min time | avg time | max time |%varavg| %total 339s --------------------------------------------------------------- 339s Pair | 0.48662 | 0.48662 | 0.48662 | 0.0 | 78.54 339s Neigh | 0.0058346 | 0.0058346 | 0.0058346 | 0.0 | 0.94 339s Comm | 0.015853 | 0.015853 | 0.015853 | 0.0 | 2.56 339s Output | 0.019965 | 0.019965 | 0.019965 | 0.0 | 3.22 339s Modify | 0.08486 | 0.08486 | 0.08486 | 0.0 | 13.70 339s Other | | 0.006467 | | | 1.04 339s 339s Nlocal: 400 ave 400 max 400 min 339s Histogram: 1 0 0 0 0 0 0 0 0 0 339s Nghost: 284 ave 284 max 284 min 339s Histogram: 1 0 0 0 0 0 0 0 0 0 339s Neighs: 3287 ave 3287 max 3287 min 339s Histogram: 1 0 0 0 0 0 0 0 0 0 339s 339s Total # of neighbors = 3287 339s Ave neighs/atom = 8.2175 339s Neighbor list builds = 51 339s Dangerous builds = 0 339s Total wall time: 0:00:01 339s LAMMPS (7 Feb 2024 - Update 1) 339s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 339s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 339s using 1 OpenMP thread(s) per MPI task 339s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 339s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 339s 2 by 1 by 1 MPI processor grid 339s Created 400 atoms 339s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 339s create_atoms CPU = 0.001 seconds 339s Setting atom values ... 339s 29 settings made for type/fraction 339s Setting atom values ... 339s 371 settings made for mass 339s Setting atom values ... 339s 29 settings made for mass 339s Setting atom values ... 339s 371 settings made for shape 339s Setting atom values ... 339s 29 settings made for shape 339s Setting atom values ... 339s 400 settings made for quat/random 339s 371 atoms in group spheroid 339s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 339s Neighbor list info ... 339s update: every = 1 steps, delay = 0 steps, check = yes 339s max neighbors/atom: 2000, page size: 100000 339s master list distance cutoff = 4.8 339s ghost atom cutoff = 4.8 339s binsize = 2.4, bins = 59 59 3 339s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 339s (1) pair resquared, perpetual 339s attributes: half, newton on 339s pair build: half/bin/atomonly/newton 339s stencil: half/bin/2d 339s bin: standard 339s Setting up Verlet run ... 339s Unit style : lj 339s Current step : 0 339s Time step : 0.002 339s Per MPI rank memory allocation (min/avg/max) = 4.744 | 4.744 | 4.744 Mbytes 339s Step c_rot E_pair TotEng Press Volume 339s 0 2.3158404 0 2.394 0.04788 20000 339s 100 1.7101139 0 1.7678302 0.034413192 20548.286 339s 200 2.3115592 0 2.3895743 0.04649702 20556.796 339s 300 1.831333 0 1.8931405 0.041256922 18354.646 339s 400 2.1837684 -8.9738883e-06 2.2574616 0.066522186 13574.035 339s 500 1.9709471 0.0022832653 2.017568 0.098398099 8395.6884 339s 600 2.1312025 0.15575534 2.2465639 0.43878461 4664.4094 339s 700 1.9768729 0.20704026 2.1544534 0.85727857 2661.7782 339s 800 1.8049358 0.20410493 1.965827 1.2647972 1769.9195 339s 900 1.8115555 0.2163004 1.9984639 1.6554526 1443.3838 339s 1000 1.9171641 0.2328859 2.1621182 1.7795638 1436.7766 339s 1100 1.9523886 0.09158383 2.0589755 0.91188602 1668.1861 339s 1200 2.0844678 0.062228051 2.0997798 0.63282414 2088.0586 339s 1300 1.9225253 0.052820284 1.9484124 0.44379326 2643.4175 339s 1400 2.1265088 0.033305088 2.1345672 0.34979266 3172.6223 339s 1500 1.9551661 0.053995306 2.0077177 0.34810901 3444.8372 339s 1600 2.15222 0.057084004 2.1910214 0.39212275 3290.66 340s 1700 2.0126393 0.092807299 2.0739086 0.53567035 2812.2166 340s 1800 2.1109716 0.18678852 2.2572287 1.0092292 2267.5536 340s 1900 1.9107655 0.26801333 2.1635401 1.5374301 1862.3897 340s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 340s Loop time of 0.863361 on 2 procs for 2000 steps with 400 atoms 340s 340s Performance: 400296.216 tau/day, 2316.529 timesteps/s, 926.612 katom-step/s 340s 91.4% CPU use with 2 MPI tasks x 1 OpenMP threads 340s 340s MPI task timing breakdown: 340s Section | min time | avg time | max time |%varavg| %total 340s --------------------------------------------------------------- 340s Pair | 0.40519 | 0.4131 | 0.42101 | 1.2 | 47.85 340s Neigh | 0.010787 | 0.14318 | 0.27557 | 35.0 | 16.58 340s Comm | 0.033932 | 0.17412 | 0.31431 | 33.6 | 20.17 340s Output | 0.023977 | 0.024185 | 0.024393 | 0.1 | 2.80 340s Modify | 0.085799 | 0.086678 | 0.087558 | 0.3 | 10.04 340s Other | | 0.0221 | | | 2.56 340s 340s Nlocal: 200 ave 210 max 190 min 340s Histogram: 1 0 0 0 0 0 0 0 0 1 340s Nghost: 164 ave 168 max 160 min 340s Histogram: 1 0 0 0 0 0 0 0 0 1 340s Neighs: 910 ave 958 max 862 min 340s Histogram: 1 0 0 0 0 0 0 0 0 1 340s 340s Total # of neighbors = 1820 340s Ave neighs/atom = 4.55 340s Neighbor list builds = 420 340s Dangerous builds = 0 340s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 340s Setting up Verlet run ... 340s Unit style : lj 340s Current step : 2000 340s Time step : 0.002 340s Per MPI rank memory allocation (min/avg/max) = 6.89 | 6.89 | 6.89 Mbytes 340s Step c_rot E_pair TotEng Press Volume 340s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 340s 2100 1.9990056 0.14555548 2.132148 1.1813518 1639.6982 340s 2200 1.9913934 0.15343329 2.1279388 1.2079524 1639.6982 340s 2300 1.9931915 0.15156716 2.1646511 1.1963228 1639.6982 340s 2400 1.9969018 0.14779678 2.1413044 1.1999441 1639.6982 340s 2500 1.9401284 0.20640998 2.168038 1.4643778 1639.6982 340s 2600 1.9492999 0.19710633 2.136292 1.3812079 1639.6982 340s 2700 2.0106221 0.13364602 2.1384766 1.1322764 1639.6982 340s 2800 1.9890373 0.15589592 2.1204126 1.2343376 1639.6982 340s 2900 1.9922852 0.15256975 2.0956529 1.2419165 1639.6982 340s 3000 1.9618081 0.18405955 2.1392907 1.3468024 1639.6982 340s 3100 1.920815 0.22640753 2.1223513 1.6487874 1639.6982 340s 3200 1.9201455 0.22718151 2.1360379 1.537008 1639.6982 340s 3300 2.0073207 0.13690691 2.1185858 1.1973827 1639.6982 340s 3400 2.0179674 0.12601938 2.1227815 1.0847666 1639.6982 340s 3500 1.9561038 0.18991636 2.11504 1.3377604 1639.6982 340s 3600 1.9971208 0.14756321 2.1401442 1.2026471 1639.6982 340s 3700 1.9731986 0.17227975 2.1472974 1.2730305 1639.6982 340s 3800 2.0000945 0.1444447 2.0994588 1.1502433 1639.6982 340s 3900 1.9911415 0.15372488 2.1423535 1.227966 1639.6982 341s 4000 1.9822293 0.16299254 2.0899439 1.2166942 1639.6982 341s Loop time of 0.905334 on 2 procs for 2000 steps with 400 atoms 341s 341s Performance: 381737.751 tau/day, 2209.131 timesteps/s, 883.652 katom-step/s 341s 98.7% CPU use with 2 MPI tasks x 1 OpenMP threads 341s 341s MPI task timing breakdown: 341s Section | min time | avg time | max time |%varavg| %total 341s --------------------------------------------------------------- 341s Pair | 0.70612 | 0.74965 | 0.79317 | 5.0 | 82.80 341s Neigh | 0.0020488 | 0.0022045 | 0.0023603 | 0.3 | 0.24 341s Comm | 0.038643 | 0.082267 | 0.12589 | 15.2 | 9.09 341s Output | 0.016526 | 0.016761 | 0.016995 | 0.2 | 1.85 341s Modify | 0.040123 | 0.043685 | 0.047247 | 1.7 | 4.83 341s Other | | 0.01077 | | | 1.19 341s 341s Nlocal: 200 ave 212 max 188 min 341s Histogram: 1 0 0 0 0 0 0 0 0 1 341s Nghost: 171.5 ave 173 max 170 min 341s Histogram: 1 0 0 0 0 0 0 0 0 1 341s Neighs: 880.5 ave 946 max 815 min 341s Histogram: 1 0 0 0 0 0 0 0 0 1 341s 341s Total # of neighbors = 1761 341s Ave neighs/atom = 4.4025 341s Neighbor list builds = 49 341s Dangerous builds = 0 341s Total wall time: 0:00:01 341s LAMMPS (7 Feb 2024 - Update 1) 342s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 342s using 1 OpenMP thread(s) per MPI task 342s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 342s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 342s 1 by 1 by 1 MPI processor grid 342s Created 400 atoms 342s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 342s create_atoms CPU = 0.000 seconds 342s Setting atom values ... 342s 29 settings made for type/fraction 342s Setting atom values ... 342s 371 settings made for mass 342s Setting atom values ... 342s 29 settings made for mass 342s Setting atom values ... 342s 371 settings made for shape 342s Setting atom values ... 342s 29 settings made for shape 342s Setting atom values ... 342s 400 settings made for quat/random 342s 371 atoms in group spheroid 342s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 342s Neighbor list info ... 342s update: every = 1 steps, delay = 0 steps, check = yes 342s max neighbors/atom: 2000, page size: 100000 342s master list distance cutoff = 4.8 342s ghost atom cutoff = 4.8 342s binsize = 2.4, bins = 59 59 3 342s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 342s (1) pair resquared, perpetual 342s attributes: half, newton on 342s pair build: half/bin/atomonly/newton 342s stencil: half/bin/2d 342s bin: standard 342s Setting up Verlet run ... 342s Unit style : lj 342s Current step : 0 342s Time step : 0.002 342s Per MPI rank memory allocation (min/avg/max) = 4.753 | 4.753 | 4.753 Mbytes 342s Step c_rot E_pair TotEng Press Volume 342s 0 2.3158404 0 2.394 0.04788 20000 342s 100 1.7101139 0 1.7678302 0.034413192 20548.286 342s 200 2.3115592 0 2.3895743 0.04649702 20556.796 342s 300 1.831333 0 1.8931405 0.041256922 18354.646 342s 400 2.1837684 -8.9738883e-06 2.2574616 0.066522186 13574.035 342s 500 1.9709471 0.0022832653 2.017568 0.098398099 8395.6884 342s 600 2.1312025 0.15575534 2.2465639 0.43878461 4664.4094 342s 700 1.9768729 0.20704026 2.1544534 0.85727857 2661.7782 342s 800 1.8049358 0.20410493 1.965827 1.2647972 1769.9195 342s 900 1.8115555 0.2163004 1.9984639 1.6554526 1443.3838 342s 1000 1.9171641 0.2328859 2.1621182 1.7795638 1436.7766 342s 1100 1.9523886 0.09158383 2.0589755 0.91188602 1668.1861 342s 1200 2.0844678 0.062228051 2.0997798 0.63282414 2088.0586 342s 1300 1.9225253 0.052820284 1.9484124 0.44379326 2643.4175 342s 1400 2.1265088 0.033305088 2.1345672 0.34979266 3172.6223 342s 1500 1.9551661 0.053995306 2.0077177 0.34810901 3444.8372 342s 1600 2.15222 0.057084004 2.1910214 0.39212275 3290.66 342s 1700 2.0126393 0.092807299 2.0739086 0.53567035 2812.2166 342s 1800 2.1109716 0.18678852 2.2572287 1.0092292 2267.5536 342s 1900 1.9107655 0.26801333 2.1635401 1.5374301 1862.3897 342s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 342s Loop time of 1.00817 on 1 procs for 2000 steps with 400 atoms 342s 342s Performance: 342800.085 tau/day, 1983.797 timesteps/s, 793.519 katom-step/s 342s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads 342s 342s MPI task timing breakdown: 342s Section | min time | avg time | max time |%varavg| %total 342s --------------------------------------------------------------- 342s Pair | 0.82114 | 0.82114 | 0.82114 | 0.0 | 81.45 342s Neigh | 0.021237 | 0.021237 | 0.021237 | 0.0 | 2.11 342s Comm | 0.0084366 | 0.0084366 | 0.0084366 | 0.0 | 0.84 342s Output | 0.019569 | 0.019569 | 0.019569 | 0.0 | 1.94 342s Modify | 0.13236 | 0.13236 | 0.13236 | 0.0 | 13.13 344s Other | | 0.005432 | | | 0.54 344s 344s Nlocal: 400 ave 400 max 400 min 344s Histogram: 1 0 0 0 0 0 0 0 0 0 344s Nghost: 206 ave 206 max 206 min 344s Histogram: 1 0 0 0 0 0 0 0 0 0 344s Neighs: 1820 ave 1820 max 1820 min 344s Histogram: 1 0 0 0 0 0 0 0 0 0 344s 344s Total # of neighbors = 1820 344s Ave neighs/atom = 4.55 344s Neighbor list builds = 420 344s Dangerous builds = 0 344s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 344s Setting up Verlet run ... 344s Unit style : lj 344s Current step : 2000 344s Time step : 0.002 344s Per MPI rank memory allocation (min/avg/max) = 6.917 | 6.917 | 6.917 Mbytes 344s Step c_rot E_pair TotEng Press Volume 344s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 344s 2100 1.9990056 0.14555548 2.132148 1.1813518 1639.6982 344s 2200 1.9913934 0.15343329 2.1279388 1.2079524 1639.6982 344s 2300 1.9931915 0.15156716 2.1646511 1.1963228 1639.6982 344s 2400 1.9969018 0.14779678 2.1413044 1.1999441 1639.6982 344s 2500 1.9401284 0.20640998 2.168038 1.4643778 1639.6982 344s 2600 1.9492999 0.19710633 2.136292 1.3812079 1639.6982 344s 2700 2.0106221 0.13364602 2.1384766 1.1322764 1639.6982 344s 2800 1.9890373 0.15589593 2.1204126 1.2343376 1639.6982 344s 2900 1.9922852 0.15256971 2.0956529 1.2419163 1639.6982 344s 3000 1.9618081 0.18405956 2.1392907 1.3468024 1639.6982 344s 3100 1.9208147 0.22640783 2.1223514 1.6487893 1639.6982 344s 3200 1.9201454 0.2271816 2.136038 1.5370083 1639.6982 344s 3300 2.0073199 0.13690769 2.1185864 1.1973892 1639.6982 344s 3400 2.0179674 0.12601938 2.1227814 1.0847667 1639.6982 344s 3500 1.9561059 0.1899142 2.1150384 1.3377509 1639.6982 344s 3600 1.9971218 0.14756225 2.1401434 1.2026401 1639.6982 344s 3700 1.9731874 0.17229133 2.1473283 1.2730808 1639.6982 344s 3800 2.0000992 0.14443988 2.0994807 1.1502356 1639.6982 344s 3900 1.9911429 0.15372349 2.1424035 1.227982 1639.6982 344s 4000 1.9823333 0.16288519 2.0899581 1.2162824 1639.6982 344s Loop time of 1.67045 on 1 procs for 2000 steps with 400 atoms 344s 344s Performance: 206890.596 tau/day, 1197.284 timesteps/s, 478.913 katom-step/s 344s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads 344s 344s MPI task timing breakdown: 344s Section | min time | avg time | max time |%varavg| %total 344s --------------------------------------------------------------- 344s Pair | 1.5488 | 1.5488 | 1.5488 | 0.0 | 92.72 344s Neigh | 0.0041911 | 0.0041911 | 0.0041911 | 0.0 | 0.25 344s Comm | 0.010009 | 0.010009 | 0.010009 | 0.0 | 0.60 344s Output | 0.019987 | 0.019987 | 0.019987 | 0.0 | 1.20 344s Modify | 0.083102 | 0.083102 | 0.083102 | 0.0 | 4.97 344s Other | | 0.004375 | | | 0.26 344s 344s Nlocal: 400 ave 400 max 400 min 344s Histogram: 1 0 0 0 0 0 0 0 0 0 344s Nghost: 215 ave 215 max 215 min 344s Histogram: 1 0 0 0 0 0 0 0 0 0 344s Neighs: 1761 ave 1761 max 1761 min 344s Histogram: 1 0 0 0 0 0 0 0 0 0 344s 344s Total # of neighbors = 1761 344s Ave neighs/atom = 4.4025 344s Neighbor list builds = 49 344s Dangerous builds = 0 344s Total wall time: 0:00:02 344s run: OK 344s autopkgtest [11:34:29]: test ellipse: -----------------------] 345s autopkgtest [11:34:30]: test ellipse: - - - - - - - - - - results - - - - - - - - - - 345s ellipse PASS 347s autopkgtest [11:34:32]: test flow: preparing testbed 349s Reading package lists... 350s Building dependency tree... 350s Reading state information... 350s Starting pkgProblemResolver with broken count: 0 350s Starting 2 pkgProblemResolver with broken count: 0 350s Done 351s The following NEW packages will be installed: 351s autopkgtest-satdep 351s 0 upgraded, 1 newly installed, 0 to remove and 4 not upgraded. 351s Need to get 0 B/700 B of archives. 351s After this operation, 0 B of additional disk space will be used. 351s Get:1 /tmp/autopkgtest.1kosEq/4-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [700 B] 353s Selecting previously unselected package autopkgtest-satdep. 353s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78927 files and directories currently installed.) 353s Preparing to unpack .../4-autopkgtest-satdep.deb ... 353s Unpacking autopkgtest-satdep (0) ... 353s Setting up autopkgtest-satdep (0) ... 357s (Reading database ... 78927 files and directories currently installed.) 357s Removing autopkgtest-satdep (0) ... 358s autopkgtest [11:34:43]: test flow: [----------------------- 361s LAMMPS (7 Feb 2024 - Update 1) 361s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 361s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 361s using 1 OpenMP thread(s) per MPI task 361s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 361s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 361s 2 by 1 by 1 MPI processor grid 361s Created 420 atoms 361s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 361s create_atoms CPU = 0.000 seconds 361s 60 atoms in group lower 361s 60 atoms in group upper 361s 120 atoms in group boundary 361s 300 atoms in group flow 361s Setting atom values ... 361s 60 settings made for type 361s Setting atom values ... 361s 60 settings made for type 361s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 361s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 361s Neighbor list info ... 361s update: every = 1 steps, delay = 5 steps, check = yes 361s max neighbors/atom: 2000, page size: 100000 361s master list distance cutoff = 1.42246 361s ghost atom cutoff = 1.42246 361s binsize = 0.71123, bins = 37 32 1 361s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 361s (1) pair lj/cut, perpetual 361s attributes: half, newton on 361s pair build: half/bin/atomonly/newton 361s stencil: half/bin/2d 361s bin: standard 361s Setting up Verlet run ... 361s Unit style : lj 361s Current step : 0 361s Time step : 0.003 361s Per MPI rank memory allocation (min/avg/max) = 3.044 | 3.044 | 3.044 Mbytes 361s Step Temp E_pair E_mol TotEng Press Volume 361s 0 1 0 0 0.71190476 0.52314537 571.54286 361s 500 1.0951876 -0.33403931 0 0.44562996 3.2502319 571.54286 361s 1000 1 -0.3731019 0 0.33880286 2.8561715 571.54286 361s 1500 1.0366879 -0.36031105 0 0.37771198 3.0196355 571.54286 361s 2000 1 -0.41053025 0 0.30137451 2.8651905 571.54286 361s 2500 1.1226126 -0.37018872 0 0.42900451 2.9459225 571.54286 361s 3000 1 -0.40149829 0 0.31040647 2.7056256 571.54286 361s 3500 1.071429 -0.46774125 0 0.29501417 2.5582838 571.54286 361s 4000 1 -0.39054248 0 0.32136228 2.4314528 571.54286 361s 4500 1.029458 -0.40311018 0 0.32976584 2.5012442 571.54286 361s 5000 1 -0.44252019 0 0.26938457 2.3566317 571.54286 361s 5500 1.0715559 -0.4771158 0 0.28572997 2.420979 571.54286 361s 6000 1 -0.42490153 0 0.28700323 2.4032097 571.54286 361s 6500 1.1729217 -0.43515146 0 0.39985708 2.3670704 571.54286 362s 7000 1 -0.4539943 0 0.25791046 2.36148 571.54286 362s 7500 1.1676524 -0.40784405 0 0.42341328 2.699336 571.54286 362s 8000 1 -0.37626352 0 0.33564124 2.8174026 571.54286 362s 8500 1.1583539 -0.41258281 0 0.41205487 2.6617634 571.54286 362s 9000 1 -0.42918407 0 0.28272069 2.3090418 571.54286 362s 9500 1.0432103 -0.39042315 0 0.3522432 2.6910698 571.54286 362s 10000 1 -0.4676995 0 0.24420526 2.3898708 571.54286 362s Loop time of 0.209469 on 2 procs for 10000 steps with 420 atoms 362s 362s Performance: 12374133.325 tau/day, 47739.712 timesteps/s, 20.051 Matom-step/s 362s 85.2% CPU use with 2 MPI tasks x 1 OpenMP threads 362s 362s MPI task timing breakdown: 362s Section | min time | avg time | max time |%varavg| %total 362s --------------------------------------------------------------- 362s Pair | 0.037773 | 0.0455 | 0.053227 | 3.6 | 21.72 362s Neigh | 0.019687 | 0.027246 | 0.034804 | 4.6 | 13.01 362s Comm | 0.067099 | 0.082372 | 0.097645 | 5.3 | 39.32 362s Output | 0.0002314 | 0.00052175 | 0.0008121 | 0.0 | 0.25 362s Modify | 0.025166 | 0.025176 | 0.025185 | 0.0 | 12.02 362s Other | | 0.02865 | | | 13.68 362s 362s Nlocal: 210 ave 214 max 206 min 362s Histogram: 1 0 0 0 0 0 0 0 0 1 362s Nghost: 51 ave 52 max 50 min 362s Histogram: 1 0 0 0 0 0 0 0 0 1 362s Neighs: 472 ave 494 max 450 min 362s Histogram: 1 0 0 0 0 0 0 0 0 1 362s 362s Total # of neighbors = 944 362s Ave neighs/atom = 2.247619 362s Neighbor list builds = 994 362s Dangerous builds = 0 362s Total wall time: 0:00:00 363s LAMMPS (7 Feb 2024 - Update 1) 363s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 363s using 1 OpenMP thread(s) per MPI task 363s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 363s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 363s 1 by 1 by 1 MPI processor grid 363s Created 420 atoms 363s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 363s create_atoms CPU = 0.000 seconds 363s 60 atoms in group lower 363s 60 atoms in group upper 363s 120 atoms in group boundary 363s 300 atoms in group flow 363s Setting atom values ... 363s 60 settings made for type 363s Setting atom values ... 363s 60 settings made for type 363s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 363s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 363s Neighbor list info ... 363s update: every = 1 steps, delay = 5 steps, check = yes 363s max neighbors/atom: 2000, page size: 100000 363s master list distance cutoff = 1.42246 363s ghost atom cutoff = 1.42246 363s binsize = 0.71123, bins = 37 32 1 363s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 363s (1) pair lj/cut, perpetual 363s attributes: half, newton on 363s pair build: half/bin/atomonly/newton 363s stencil: half/bin/2d 363s bin: standard 363s Setting up Verlet run ... 363s Unit style : lj 363s Current step : 0 363s Time step : 0.003 363s Per MPI rank memory allocation (min/avg/max) = 3.048 | 3.048 | 3.048 Mbytes 363s Step Temp E_pair E_mol TotEng Press Volume 363s 0 1 0 0 0.71190476 0.52314537 571.54286 363s 500 1.0644427 -0.31382888 0 0.44395296 3.0013076 571.54286 363s 1000 1 -0.42965445 0 0.28225032 2.9612165 571.54286 363s 1500 1.0739874 -0.41189772 0 0.35267901 2.5621951 571.54286 363s 2000 1 -0.40814262 0 0.30376214 2.9229597 571.54286 363s 2500 1.193035 -0.38493995 0 0.46438736 2.8340607 571.54286 363s 3000 1 -0.45564537 0 0.2562594 2.7506498 571.54286 363s 3500 1.0626882 -0.45013361 0 0.30639918 2.5530157 571.54286 363s 4000 1 -0.39613722 0 0.31576755 2.4669827 571.54286 363s 4500 1.0832856 -0.43003699 0 0.34115919 2.2569491 571.54286 363s 5000 1 -0.42733451 0 0.28457025 2.4685826 571.54286 363s 5500 1.0413391 -0.39346589 0 0.34786835 2.6348761 571.54286 363s 6000 1 -0.42845926 0 0.2834455 2.4988125 571.54286 363s 6500 1.0890296 -0.43775517 0 0.33753016 2.4384217 571.54286 363s 7000 1 -0.46023483 0 0.25166993 2.4429964 571.54286 363s 7500 1.0644341 -0.45175861 0 0.3060171 2.4324515 571.54286 363s 8000 1 -0.43920605 0 0.27269871 2.6469713 571.54286 363s 8500 1.0647184 -0.45399641 0 0.3039817 2.5748114 571.54286 363s 9000 1 -0.46453995 0 0.24736482 2.6591355 571.54286 363s 9500 1.0123 -0.44029216 0 0.28036906 2.413597 571.54286 363s 10000 1 -0.43826448 0 0.27364028 2.3699706 571.54286 363s Loop time of 0.18918 on 1 procs for 10000 steps with 420 atoms 363s 363s Performance: 13701269.870 tau/day, 52859.837 timesteps/s, 22.201 Matom-step/s 363s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 363s 363s MPI task timing breakdown: 363s Section | min time | avg time | max time |%varavg| %total 363s --------------------------------------------------------------- 363s Pair | 0.079192 | 0.079192 | 0.079192 | 0.0 | 41.86 363s Neigh | 0.038182 | 0.038182 | 0.038182 | 0.0 | 20.18 363s Comm | 0.0061485 | 0.0061485 | 0.0061485 | 0.0 | 3.25 363s Output | 0.00016932 | 0.00016932 | 0.00016932 | 0.0 | 0.09 363s Modify | 0.050369 | 0.050369 | 0.050369 | 0.0 | 26.62 363s Other | | 0.01512 | | | 7.99 363s 363s Nlocal: 420 ave 420 max 420 min 363s Histogram: 1 0 0 0 0 0 0 0 0 0 363s Nghost: 50 ave 50 max 50 min 363s Histogram: 1 0 0 0 0 0 0 0 0 0 363s Neighs: 946 ave 946 max 946 min 363s Histogram: 1 0 0 0 0 0 0 0 0 0 363s 363s Total # of neighbors = 946 363s Ave neighs/atom = 2.252381 363s Neighbor list builds = 979 363s Dangerous builds = 0 363s Total wall time: 0:00:00 364s LAMMPS (7 Feb 2024 - Update 1) 364s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 364s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 364s using 1 OpenMP thread(s) per MPI task 364s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 364s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 364s 2 by 1 by 1 MPI processor grid 364s Created 420 atoms 364s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 364s create_atoms CPU = 0.001 seconds 364s 60 atoms in group lower 364s 60 atoms in group upper 364s 120 atoms in group boundary 364s 300 atoms in group flow 364s Setting atom values ... 364s 60 settings made for type 364s Setting atom values ... 364s 60 settings made for type 364s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 364s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 364s Neighbor list info ... 364s update: every = 1 steps, delay = 5 steps, check = yes 364s max neighbors/atom: 2000, page size: 100000 364s master list distance cutoff = 1.42246 364s ghost atom cutoff = 1.42246 364s binsize = 0.71123, bins = 37 32 1 364s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 364s (1) pair lj/cut, perpetual 364s attributes: half, newton on 364s pair build: half/bin/atomonly/newton 364s stencil: half/bin/2d 364s bin: standard 364s Setting up Verlet run ... 364s Unit style : lj 364s Current step : 0 364s Time step : 0.003 364s Per MPI rank memory allocation (min/avg/max) = 3.044 | 3.044 | 3.044 Mbytes 364s Step Temp E_pair E_mol TotEng Press Volume 364s 0 1 0 0 0.71190476 0.52314537 571.54286 364s 500 1.0758737 -0.36090417 0 0.40501541 2.7822308 575.0659 364s 1000 1 -0.35701441 0 0.35489035 2.0575313 585.71407 364s 1500 1.2368663 -0.37709732 0 0.50343367 1.4865879 587.193 364s 2000 1 -0.39362939 0 0.31827537 1.4236 578.9418 364s 2500 1.2272957 -0.42381901 0 0.44989865 1.4544608 570.15856 364s 3000 1 -0.4914342 0 0.22047056 1.534595 554.98633 364s 3500 1.2444794 -0.59760758 0 0.2883432 1.8754993 537.01599 364s 4000 1 -0.69890444 0 0.013000318 2.1406234 521.49815 364s 4500 1.2188346 -0.74991278 0 0.1177814 2.7508733 507.73977 364s 5000 1 -0.7445329 0 -0.032628135 3.1054873 501.68859 364s 5500 1.1836415 -0.76775125 0 0.074888789 2.6990153 506.01181 364s 6000 1 -0.7575268 0 -0.04562204 2.4858442 508.26846 364s 6500 1.2076032 -0.68884147 0 0.17085699 2.3143206 512.291 364s 7000 1 -0.66241571 0 0.049489051 2.0686009 516.38744 364s 7500 1.2123711 -0.71994819 0 0.14314459 2.1753937 513.88371 364s 8000 1 -0.71001477 0 0.0018899921 2.0630419 509.80458 364s 8500 1.1991563 -0.78355267 0 0.070132412 2.493712 504.22835 364s 9000 1 -0.72719051 0 -0.015285749 2.27793 505.75742 364s 9500 1.2073739 -0.76518329 0 0.094351911 2.5653732 503.29071 364s 10000 1 -0.78638614 0 -0.074481378 2.3564468 504.38491 364s Loop time of 0.192736 on 2 procs for 10000 steps with 420 atoms 364s 364s Performance: 13448473.819 tau/day, 51884.544 timesteps/s, 21.792 Matom-step/s 364s 96.2% CPU use with 2 MPI tasks x 1 OpenMP threads 364s 364s MPI task timing breakdown: 364s Section | min time | avg time | max time |%varavg| %total 364s --------------------------------------------------------------- 364s Pair | 0.042181 | 0.046326 | 0.050472 | 1.9 | 24.04 364s Neigh | 0.01125 | 0.011285 | 0.01132 | 0.0 | 5.86 364s Comm | 0.056913 | 0.061619 | 0.066326 | 1.9 | 31.97 364s Output | 0.00027509 | 0.00060662 | 0.00093815 | 0.0 | 0.31 364s Modify | 0.056746 | 0.056817 | 0.056888 | 0.0 | 29.48 364s Other | | 0.01608 | | | 8.34 364s 364s Nlocal: 210 ave 211 max 209 min 364s Histogram: 1 0 0 0 0 0 0 0 0 1 364s Nghost: 50 ave 51 max 49 min 364s Histogram: 1 0 0 0 0 0 0 0 0 1 364s Neighs: 563.5 ave 569 max 558 min 364s Histogram: 1 0 0 0 0 0 0 0 0 1 364s 364s Total # of neighbors = 1127 364s Ave neighs/atom = 2.6833333 364s Neighbor list builds = 560 364s Dangerous builds = 0 364s Total wall time: 0:00:00 364s LAMMPS (7 Feb 2024 - Update 1) 364s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 364s using 1 OpenMP thread(s) per MPI task 364s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 364s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 364s 1 by 1 by 1 MPI processor grid 364s Created 420 atoms 364s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 364s create_atoms CPU = 0.000 seconds 364s 60 atoms in group lower 364s 60 atoms in group upper 364s 120 atoms in group boundary 364s 300 atoms in group flow 364s Setting atom values ... 364s 60 settings made for type 364s Setting atom values ... 364s 60 settings made for type 364s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 364s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 364s Neighbor list info ... 364s update: every = 1 steps, delay = 5 steps, check = yes 364s max neighbors/atom: 2000, page size: 100000 364s master list distance cutoff = 1.42246 364s ghost atom cutoff = 1.42246 364s binsize = 0.71123, bins = 37 32 1 364s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 364s (1) pair lj/cut, perpetual 364s attributes: half, newton on 364s pair build: half/bin/atomonly/newton 364s stencil: half/bin/2d 364s bin: standard 364s Setting up Verlet run ... 364s Unit style : lj 364s Current step : 0 364s Time step : 0.003 364s Per MPI rank memory allocation (min/avg/max) = 3.048 | 3.048 | 3.048 Mbytes 364s Step Temp E_pair E_mol TotEng Press Volume 364s 0 1 0 0 0.71190476 0.52314537 571.54286 364s 500 1.0990751 -0.36396768 0 0.41846911 2.522517 575.55806 364s 1000 1 -0.34609791 0 0.36580685 1.9736175 584.67179 364s 1500 1.2112861 -0.39062708 0 0.47169327 1.521881 587.24778 364s 2000 1 -0.39956949 0 0.31233527 1.2496669 583.00676 364s 2500 1.2236323 -0.40128447 0 0.46982521 1.427689 570.03729 364s 3000 1 -0.48849374 0 0.22341102 1.5091345 553.64637 364s 3500 1.2404604 -0.63017693 0 0.25291274 1.7681156 535.22588 364s 4000 1 -0.71303348 0 -0.001128721 2.2083475 516.7312 364s 4500 1.2316246 -0.77421749 0 0.10258194 2.5788522 503.1817 364s 5000 1 -0.7999552 0 -0.088050433 3.1546066 498.48431 364s 5500 1.2347442 -0.74592478 0 0.13309548 2.695455 502.87799 364s 6000 1 -0.67044678 0 0.041457981 2.2074541 513.82275 364s 6500 1.2102356 -0.63751404 0 0.22405846 1.9921588 517.21223 364s 7000 1 -0.65043667 0 0.061468095 1.8816222 517.22883 364s 7500 1.2366099 -0.68011129 0 0.20023717 2.0387578 515.33777 364s 8000 1 -0.72046833 0 -0.0085635721 2.1380846 510.42066 364s 8500 1.2219154 -0.79786917 0 0.072018214 2.2824348 503.99311 364s 9000 1 -0.78517366 0 -0.073268895 2.6920699 500.15016 364s 9500 1.1934208 -0.7468438 0 0.10275813 2.4971524 501.17896 364s 10000 1 -0.67478993 0 0.037114833 2.3681765 504.37054 364s Loop time of 0.222525 on 1 procs for 10000 steps with 420 atoms 364s 364s Performance: 11648103.303 tau/day, 44938.670 timesteps/s, 18.874 Matom-step/s 364s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 364s 364s MPI task timing breakdown: 364s Section | min time | avg time | max time |%varavg| %total 364s --------------------------------------------------------------- 364s Pair | 0.085711 | 0.085711 | 0.085711 | 0.0 | 38.52 365s Neigh | 0.021906 | 0.021906 | 0.021906 | 0.0 | 9.84 365s Comm | 0.0051167 | 0.0051167 | 0.0051167 | 0.0 | 2.30 365s Output | 0.00019441 | 0.00019441 | 0.00019441 | 0.0 | 0.09 365s Modify | 0.095304 | 0.095304 | 0.095304 | 0.0 | 42.83 365s Other | | 0.01429 | | | 6.42 365s 365s Nlocal: 420 ave 420 max 420 min 365s Histogram: 1 0 0 0 0 0 0 0 0 0 365s Nghost: 51 ave 51 max 51 min 365s Histogram: 1 0 0 0 0 0 0 0 0 0 365s Neighs: 1150 ave 1150 max 1150 min 365s Histogram: 1 0 0 0 0 0 0 0 0 0 365s 365s Total # of neighbors = 1150 365s Ave neighs/atom = 2.7380952 365s Neighbor list builds = 563 365s Dangerous builds = 0 365s Total wall time: 0:00:00 365s run: OK 365s autopkgtest [11:34:50]: test flow: -----------------------] 366s autopkgtest [11:34:51]: test flow: - - - - - - - - - - results - - - - - - - - - - 366s flow PASS 367s autopkgtest [11:34:52]: test friction: preparing testbed 369s Reading package lists... 370s Building dependency tree... 370s Reading state information... 370s Starting pkgProblemResolver with broken count: 0 371s Starting 2 pkgProblemResolver with broken count: 0 371s Done 371s The following NEW packages will be installed: 371s autopkgtest-satdep 371s 0 upgraded, 1 newly installed, 0 to remove and 4 not upgraded. 371s Need to get 0 B/704 B of archives. 371s After this operation, 0 B of additional disk space will be used. 371s Get:1 /tmp/autopkgtest.1kosEq/5-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [704 B] 372s Selecting previously unselected package autopkgtest-satdep. 373s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78927 files and directories currently installed.) 373s Preparing to unpack .../5-autopkgtest-satdep.deb ... 373s Unpacking autopkgtest-satdep (0) ... 373s Setting up autopkgtest-satdep (0) ... 378s (Reading database ... 78927 files and directories currently installed.) 378s Removing autopkgtest-satdep (0) ... 380s autopkgtest [11:35:05]: test friction: [----------------------- 382s LAMMPS (7 Feb 2024 - Update 1) 382s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 382s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 382s using 1 OpenMP thread(s) per MPI task 382s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 382s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 382s 2 by 1 by 1 MPI processor grid 382s Created 750 atoms 382s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 382s create_atoms CPU = 0.000 seconds 382s Created 750 atoms 382s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 382s create_atoms CPU = 0.000 seconds 382s Created 112 atoms 382s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 382s create_atoms CPU = 0.000 seconds 382s Created 112 atoms 382s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 382s create_atoms CPU = 0.000 seconds 382s 750 atoms in group lo 382s 862 atoms in group lo 382s 750 atoms in group hi 382s 862 atoms in group hi 382s 150 atoms in group lo-fixed 382s 150 atoms in group hi-fixed 382s 300 atoms in group boundary 382s 1424 atoms in group mobile 382s Setting atom values ... 382s 150 settings made for type 382s Setting atom values ... 382s 150 settings made for type 382s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 382s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 382s Neighbor list info ... 382s update: every = 1 steps, delay = 5 steps, check = yes 382s max neighbors/atom: 2000, page size: 100000 382s master list distance cutoff = 2.8 382s ghost atom cutoff = 2.8 382s binsize = 1.4, bins = 41 31 1 382s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 382s (1) pair lj/cut, perpetual 382s attributes: half, newton on 382s pair build: half/bin/atomonly/newton 382s stencil: half/bin/2d 382s bin: standard 382s Setting up Verlet run ... 382s Unit style : lj 382s Current step : 0 382s Time step : 0.0025 383s Per MPI rank memory allocation (min/avg/max) = 3.05 | 3.05 | 3.05 Mbytes 383s Step Temp E_pair E_mol TotEng Press Volume 383s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 383s 1000 0.081091635 -3.0930924 0 -3.0596257 -0.030127914 2444.9333 383s 2000 0.082087761 -3.0850474 0 -3.0511696 -0.44306626 2444.9333 383s 3000 0.088948343 -3.08139 0 -3.0446807 -0.25586469 2444.9333 383s 4000 0.091186493 -3.0656845 0 -3.0280515 -0.10060397 2444.9333 383s 5000 0.10802896 -3.0566391 0 -3.0120553 -0.13618814 2444.9333 384s 6000 0.1 -3.0489246 0 -3.0076543 -0.20314788 2444.9333 384s 7000 0.11587085 -3.0413277 0 -2.9935075 -0.37543775 2444.9333 384s 8000 0.1 -3.029647 0 -2.9883767 -0.41884104 2444.9333 385s 9000 0.11588457 -3.0253422 0 -2.9775163 -0.43584065 2444.9333 385s 10000 0.1 -3.0293042 0 -2.9880339 -0.36809832 2444.9333 385s 11000 0.11830962 -3.029318 0 -2.9804913 -0.44710474 2444.9333 385s 12000 0.1 -3.0283785 0 -2.9871082 -0.20225766 2444.9333 385s 13000 0.11646107 -3.0351824 0 -2.9871185 -0.46506235 2444.9333 385s 14000 0.11264391 -3.0399048 0 -2.9934163 -0.23851225 2444.9333 385s 15000 0.11397557 -3.0400714 0 -2.9930333 -0.27494778 2444.9333 386s 16000 0.11527553 -3.0423634 0 -2.9947889 -0.27314794 2444.9333 386s 17000 0.11820003 -3.0419531 0 -2.9931715 -0.39533728 2444.9333 386s 18000 0.11165087 -3.0494285 0 -3.0033499 -0.25447692 2444.9333 386s 19000 0.11450729 -3.0488755 0 -3.0016179 -0.27183418 2444.9333 386s 20000 0.1090499 -3.0490281 0 -3.0040229 -0.39612969 2444.9333 386s Loop time of 3.70209 on 2 procs for 20000 steps with 1724 atoms 386s 386s Performance: 1166909.305 tau/day, 5402.358 timesteps/s, 9.314 Matom-step/s 386s 96.2% CPU use with 2 MPI tasks x 1 OpenMP threads 386s 386s MPI task timing breakdown: 386s Section | min time | avg time | max time |%varavg| %total 386s --------------------------------------------------------------- 386s Pair | 2.1924 | 2.2181 | 2.2437 | 1.7 | 59.91 386s Neigh | 0.095282 | 0.10577 | 0.11625 | 3.2 | 2.86 386s Comm | 1.0164 | 1.0307 | 1.045 | 1.4 | 27.84 386s Output | 0.00036705 | 0.005332 | 0.010297 | 6.8 | 0.14 386s Modify | 0.21825 | 0.22207 | 0.22589 | 0.8 | 6.00 386s Other | | 0.1201 | | | 3.25 386s 386s Nlocal: 862 ave 874 max 850 min 386s Histogram: 1 0 0 0 0 0 0 0 0 1 386s Nghost: 165.5 ave 166 max 165 min 386s Histogram: 1 0 0 0 0 0 0 0 0 1 386s Neighs: 7198 ave 7283 max 7113 min 386s Histogram: 1 0 0 0 0 0 0 0 0 1 386s 386s Total # of neighbors = 14396 386s Ave neighs/atom = 8.350348 386s Neighbor list builds = 720 386s Dangerous builds = 0 386s Total wall time: 0:00:03 389s LAMMPS (7 Feb 2024 - Update 1) 393s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 393s using 1 OpenMP thread(s) per MPI task 393s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 393s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 393s 1 by 1 by 1 MPI processor grid 393s Created 750 atoms 393s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 393s create_atoms CPU = 0.001 seconds 393s Created 750 atoms 393s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 393s create_atoms CPU = 0.000 seconds 393s Created 112 atoms 393s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 393s create_atoms CPU = 0.000 seconds 393s Created 112 atoms 393s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 393s create_atoms CPU = 0.000 seconds 393s 750 atoms in group lo 393s 862 atoms in group lo 393s 750 atoms in group hi 393s 862 atoms in group hi 393s 150 atoms in group lo-fixed 393s 150 atoms in group hi-fixed 393s 300 atoms in group boundary 393s 1424 atoms in group mobile 393s Setting atom values ... 393s 150 settings made for type 393s Setting atom values ... 393s 150 settings made for type 393s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 393s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 393s Neighbor list info ... 393s update: every = 1 steps, delay = 5 steps, check = yes 393s max neighbors/atom: 2000, page size: 100000 393s master list distance cutoff = 2.8 393s ghost atom cutoff = 2.8 393s binsize = 1.4, bins = 41 31 1 393s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 393s (1) pair lj/cut, perpetual 393s attributes: half, newton on 393s pair build: half/bin/atomonly/newton 393s stencil: half/bin/2d 393s bin: standard 393s Setting up Verlet run ... 393s Unit style : lj 393s Current step : 0 393s Time step : 0.0025 393s Per MPI rank memory allocation (min/avg/max) = 3.059 | 3.059 | 3.059 Mbytes 393s Step Temp E_pair E_mol TotEng Press Volume 393s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 393s 1000 0.1 -3.0915072 0 -3.0502369 0.0099866805 2444.9333 393s 2000 0.1 -3.0826007 0 -3.0413304 -0.41998885 2444.9333 393s 3000 0.08982505 -3.0757908 0 -3.0387197 -0.25244271 2444.9333 393s 4000 0.098727892 -3.0666371 0 -3.0258918 -0.25382683 2444.9333 393s 5000 0.11345478 -3.0506905 0 -3.0038674 -0.029177812 2444.9333 393s 6000 0.11386723 -3.0515296 0 -3.0045363 -0.32135016 2444.9333 393s 7000 0.11555642 -3.0379879 0 -2.9902974 -0.40431662 2444.9333 393s 8000 0.10658321 -3.036405 0 -2.9924178 -0.4572299 2444.9333 393s 9000 0.11648934 -3.0271687 0 -2.9790932 -0.45898613 2444.9333 393s 10000 0.10677611 -3.0303232 0 -2.9862564 -0.35269781 2444.9333 393s 11000 0.11746006 -3.0346344 0 -2.9861583 -0.46341365 2444.9333 393s 12000 0.112074 -3.036913 0 -2.9906597 -0.21768573 2444.9333 393s 13000 0.11249017 -3.0395382 0 -2.9931132 -0.44391864 2444.9333 393s 14000 0.11381248 -3.0362108 0 -2.9892401 -0.30885868 2444.9333 393s 15000 0.10964575 -3.0436265 0 -2.9983754 -0.26625672 2444.9333 393s 16000 0.10798733 -3.0460787 0 -3.001512 -0.27971711 2444.9333 393s 17000 0.11191725 -3.0455618 0 -2.9993732 -0.36993854 2444.9333 393s 18000 0.11418143 -3.0485595 0 -3.0014364 -0.24776847 2444.9333 393s 19000 0.11028213 -3.0473558 0 -3.001842 -0.30249398 2444.9333 393s 20000 0.11512925 -3.0504969 0 -3.0029827 -0.36022205 2444.9333 393s Loop time of 4.25712 on 1 procs for 20000 steps with 1724 atoms 393s 393s Performance: 1014770.967 tau/day, 4698.014 timesteps/s, 8.099 Matom-step/s 393s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 393s 393s MPI task timing breakdown: 393s Section | min time | avg time | max time |%varavg| %total 393s --------------------------------------------------------------- 393s Pair | 3.4276 | 3.4276 | 3.4276 | 0.0 | 80.52 393s Neigh | 0.20292 | 0.20292 | 0.20292 | 0.0 | 4.77 393s Comm | 0.038488 | 0.038488 | 0.038488 | 0.0 | 0.90 393s Output | 0.010526 | 0.010526 | 0.010526 | 0.0 | 0.25 393s Modify | 0.43503 | 0.43503 | 0.43503 | 0.0 | 10.22 393s Other | | 0.1425 | | | 3.35 393s 393s Nlocal: 1724 ave 1724 max 1724 min 393s Histogram: 1 0 0 0 0 0 0 0 0 0 393s Nghost: 145 ave 145 max 145 min 393s Histogram: 1 0 0 0 0 0 0 0 0 0 393s Neighs: 14397 ave 14397 max 14397 min 393s Histogram: 1 0 0 0 0 0 0 0 0 0 393s 393s Total # of neighbors = 14397 393s Ave neighs/atom = 8.3509281 393s Neighbor list builds = 723 393s Dangerous builds = 0 393s Total wall time: 0:00:04 393s run: OK 394s autopkgtest [11:35:19]: test friction: -----------------------] 395s autopkgtest [11:35:20]: test friction: - - - - - - - - - - results - - - - - - - - - - 395s friction PASS 396s autopkgtest [11:35:21]: test hugo: preparing testbed 400s Reading package lists... 401s Building dependency tree... 401s Reading state information... 401s Starting pkgProblemResolver with broken count: 0 401s Starting 2 pkgProblemResolver with broken count: 0 401s Done 402s The following NEW packages will be installed: 402s autopkgtest-satdep 402s 0 upgraded, 1 newly installed, 0 to remove and 4 not upgraded. 402s Need to get 0 B/708 B of archives. 402s After this operation, 0 B of additional disk space will be used. 402s Get:1 /tmp/autopkgtest.1kosEq/6-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B] 404s Selecting previously unselected package autopkgtest-satdep. 404s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78927 files and directories currently installed.) 404s Preparing to unpack .../6-autopkgtest-satdep.deb ... 404s Unpacking autopkgtest-satdep (0) ... 404s Setting up autopkgtest-satdep (0) ... 408s (Reading database ... 78927 files and directories currently installed.) 408s Removing autopkgtest-satdep (0) ... 409s autopkgtest [11:35:34]: test hugo: [----------------------- 410s LAMMPS (7 Feb 2024 - Update 1) 410s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 410s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 410s using 1 OpenMP thread(s) per MPI task 410s Lattice spacing in x,y,z = 1.4142135 2 2 410s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 410s 1 by 1 by 2 MPI processor grid 410s Created 1000 atoms 410s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 410s create_atoms CPU = 0.000 seconds 410s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 410s Neighbor list info ... 410s update: every = 1 steps, delay = 0 steps, check = yes 410s max neighbors/atom: 2000, page size: 100000 410s master list distance cutoff = 1.8475372 410s ghost atom cutoff = 1.8475372 410s binsize = 0.92376862, bins = 8 11 11 410s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 410s (1) pair lj/cubic, perpetual 410s attributes: half, newton on 410s pair build: half/bin/atomonly/newton 410s stencil: half/bin/3d 410s bin: standard 410s Setting up cg style minimization ... 410s Unit style : lj 410s Current step : 0 410s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 410s (src/min.cpp:219) 410s Per MPI rank memory allocation (min/avg/max) = 4.237 | 4.237 | 4.237 Mbytes 410s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 410s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 410s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 410s 134 0 -6.3344253 -6.3344253 -4.2957391e-13 -4.6556764e-13 -4.6545223e-13 6.9780267 9.8684199 9.8684199 410s Loop time of 0.0336792 on 2 procs for 134 steps with 1000 atoms 410s 410s 99.3% CPU use with 2 MPI tasks x 1 OpenMP threads 410s 410s Minimization stats: 410s Stopping criterion = force tolerance 410s Energy initial, next-to-last, final = 410s -6.29375358358574 -6.33442531515467 -6.33442531515467 410s Force two-norm initial, final = 3395.2895 5.526433e-10 410s Force max component initial, final = 1960.2713 3.2059964e-10 410s Final line search alpha, max atom move = 1 3.2059964e-10 410s Iterations, force evaluations = 134 137 410s 410s MPI task timing breakdown: 410s Section | min time | avg time | max time |%varavg| %total 410s --------------------------------------------------------------- 410s Pair | 0.01821 | 0.01995 | 0.02169 | 1.2 | 59.24 410s Neigh | 0.0003791 | 0.00040876 | 0.00043842 | 0.0 | 1.21 410s Comm | 0.0044108 | 0.006115 | 0.0078191 | 2.2 | 18.16 410s Output | 1.94e-05 | 3.9299e-05 | 5.9198e-05 | 0.0 | 0.12 410s Modify | 0 | 0 | 0 | 0.0 | 0.00 410s Other | | 0.007166 | | | 21.28 410s 410s Nlocal: 500 ave 550 max 450 min 410s Histogram: 1 0 0 0 0 0 0 0 0 1 410s Nghost: 1214 ave 1264 max 1164 min 410s Histogram: 1 0 0 0 0 0 0 0 0 1 410s Neighs: 10500 ave 11550 max 9450 min 410s Histogram: 1 0 0 0 0 0 0 0 0 1 410s 410s Total # of neighbors = 21000 410s Ave neighs/atom = 21 410s Neighbor list builds = 1 410s Dangerous builds = 0 410s System init for write_restart ... 410s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 410s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 410s using 1 OpenMP thread(s) per MPI task 410s Reading restart file ... 410s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 410s restoring atom style atomic from restart 410s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 410s 1 by 1 by 2 MPI processor grid 410s restoring pair style lj/cubic from restart 410s 1000 atoms 410s read_restart CPU = 0.001 seconds 410s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 410s Neighbor list info ... 410s update: every = 1 steps, delay = 0 steps, check = yes 410s max neighbors/atom: 2000, page size: 100000 410s master list distance cutoff = 1.7475372 410s ghost atom cutoff = 1.7475372 410s binsize = 0.87376862, bins = 8 12 12 410s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 410s (1) pair lj/cubic, perpetual 410s attributes: half, newton on 410s pair build: half/bin/atomonly/newton 410s stencil: half/bin/3d 410s bin: standard 410s Setting up Verlet run ... 410s Unit style : lj 410s Current step : 0 410s Time step : 0.001 410s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 410s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 410s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355329 -0.00025901829 9.8684199 0 -0.0048552721 2.3792932 0.0041071767 410s 1000 0.010266754 0.015384732 -2.1717334 -4183.9192 129.07798 58.489025 8.3141524 -4.1817628 0.9362044 23.511491 3.7372332 410s 2000 0.40259797 0.60329306 -5.627962 -1085.8312 12.843116 1.8560907 9.4470663 -1.0808065 -0.37219276 14.040385 0.6226867 411s 3000 0.47352764 0.70958118 -3.847268 -3270.82 65.659321 23.910002 8.6682025 -3.2676824 -0.14827512 19.052005 2.3460318 412s 4000 0.51027892 0.76465296 -4.3666607 -2668.4808 36.299422 5.4253511 8.7365217 -2.6648788 -0.43242827 14.580921 1.6947004 412s 5000 0.27107084 0.40619965 -4.8148544 -1808.6901 35.499158 7.8616668 8.7438741 -1.8042815 -0.17683868 14.465657 1.6705446 412s 6000 0.14589565 0.21862463 -4.1603429 -2363.5903 43.618418 5.9789884 8.3935297 -2.3596486 -0.050591412 14.026367 2.1169125 413s 7000 0.085822195 0.12860456 -4.2874019 -2281.4454 40.483746 3.874914 8.3489633 -2.2772866 -0.011160894 13.315551 2.0696635 413s 8000 0.039594243 0.059331974 -4.3555951 -2176.8532 39.840893 3.7201608 8.3381853 -2.1725569 0.028292259 13.163321 2.0603537 413s 9000 0.025376486 0.038026664 -4.2983996 -2330.0794 39.628092 2.631482 8.2935294 -2.3258191 0.032864503 12.942681 2.084285 414s 10000 0.020305022 0.030427075 -4.2090968 -1864.3718 42.005843 3.1326248 8.2404246 -1.8601931 0.074717463 13.108473 2.1814026 414s Loop time of 4.02805 on 2 procs for 10000 steps with 1000 atoms 414s 414s Performance: 214495.708 tau/day, 2482.589 timesteps/s, 2.483 Matom-step/s 414s 90.6% CPU use with 2 MPI tasks x 1 OpenMP threads 414s 414s MPI task timing breakdown: 414s Section | min time | avg time | max time |%varavg| %total 414s --------------------------------------------------------------- 414s Pair | 1.937 | 2.215 | 2.493 | 18.7 | 54.99 414s Neigh | 0.084665 | 0.086792 | 0.088919 | 0.7 | 2.15 414s Comm | 0.61819 | 0.90107 | 1.184 | 29.8 | 22.37 414s Output | 0.014287 | 0.022973 | 0.031659 | 5.7 | 0.57 414s Modify | 0.66205 | 0.67516 | 0.68827 | 1.6 | 16.76 414s Other | | 0.127 | | | 3.15 414s 414s Nlocal: 500 ave 509 max 491 min 414s Histogram: 1 0 0 0 0 0 0 0 0 1 414s Nghost: 1346.5 ave 1369 max 1324 min 414s Histogram: 1 0 0 0 0 0 0 0 0 1 414s Neighs: 10311.5 ave 10391 max 10232 min 414s Histogram: 1 0 0 0 0 0 0 0 0 1 414s 414s Total # of neighbors = 20623 414s Ave neighs/atom = 20.623 414s Neighbor list builds = 205 414s Dangerous builds = 0 414s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 414s using 1 OpenMP thread(s) per MPI task 414s Reading restart file ... 414s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 414s restoring atom style atomic from restart 414s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 414s 1 by 1 by 2 MPI processor grid 414s restoring pair style lj/cubic from restart 414s 1000 atoms 414s read_restart CPU = 0.013 seconds 414s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 414s Neighbor list info ... 414s update: every = 1 steps, delay = 0 steps, check = yes 414s max neighbors/atom: 2000, page size: 100000 414s master list distance cutoff = 1.7475372 414s ghost atom cutoff = 1.7475372 414s binsize = 0.87376862, bins = 8 12 12 414s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 414s (1) pair lj/cubic, perpetual 414s attributes: half, newton on 414s pair build: half/bin/atomonly/newton 414s stencil: half/bin/3d 414s bin: standard 414s Setting up Verlet run ... 414s Unit style : lj 414s Current step : 0 414s Time step : 0.001 414s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 414s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 414s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355329 -0.00025901829 9.8684199 0 -0.0048552721 2.3792932 0.0041071767 414s 1000 0.0062790167 0.0094091065 -5.989181 -1670.9917 18.916499 7.5833446 9.2337867 -1.6650119 0.023434204 13.976079 0.92136905 414s 2000 0.0066373266 0.0099460339 -5.4562974 -2537.9609 37.066673 15.536927 8.9495838 -2.5325146 0.10236546 16.325445 1.5455989 415s 3000 0.006890427 0.010325305 -5.3657707 -2643.943 39.911802 16.807453 8.9154493 -2.6385876 0.11827588 16.639682 1.6328058 415s 4000 0.0073314031 0.010986107 -5.3630545 -2655.872 40.003435 16.849611 8.9144058 -2.6505199 0.11864983 16.649819 1.6355581 415s 5000 0.0075004567 0.011239434 -5.3630119 -2664.6029 39.9983 16.845885 8.9144863 -2.6592512 0.11845678 16.649441 1.6353853 415s 6000 0.0078159402 0.011712186 -5.3629866 -2673.5606 39.999501 16.84634 8.9144972 -2.6682093 0.11829898 16.649784 1.6354006 416s 7000 0.0078365866 0.011743125 -5.3625076 -2682.4138 40.001112 16.844623 8.9145083 -2.6770631 0.11814173 16.650214 1.6354243 416s 8000 0.0075482436 0.011311043 -5.3616205 -2690.9824 39.996485 16.835974 8.9145436 -2.6856321 0.11792207 16.649554 1.6352999 416s 9000 0.0083133885 0.012457613 -5.362258 -2700.1342 39.99904 16.841287 8.9145642 -2.6947844 0.11777124 16.650263 1.6353348 416s 10000 0.0086355586 0.012940385 -5.3622381 -2709.0315 39.997759 16.839976 8.9145913 -2.7036822 0.11757678 16.650228 1.6352858 416s Loop time of 2.54935 on 2 procs for 10000 steps with 1000 atoms 416s 416s Performance: 338909.332 tau/day, 3922.562 timesteps/s, 3.923 Matom-step/s 416s 91.8% CPU use with 2 MPI tasks x 1 OpenMP threads 416s 416s MPI task timing breakdown: 416s Section | min time | avg time | max time |%varavg| %total 416s --------------------------------------------------------------- 416s Pair | 1.6651 | 1.6933 | 1.7216 | 2.2 | 66.42 416s Neigh | 0.0041576 | 0.0041922 | 0.0042269 | 0.1 | 0.16 416s Comm | 0.34487 | 0.37271 | 0.40056 | 4.6 | 14.62 416s Output | 0.00051194 | 0.0016057 | 0.0026995 | 2.7 | 0.06 416s Modify | 0.4297 | 0.43174 | 0.43378 | 0.3 | 16.94 416s Other | | 0.04579 | | | 1.80 416s 416s Nlocal: 500 ave 508 max 492 min 416s Histogram: 1 0 0 0 0 0 0 0 0 1 416s Nghost: 1214 ave 1222 max 1206 min 416s Histogram: 1 0 0 0 0 0 0 0 0 1 416s Neighs: 10500 ave 10668 max 10332 min 416s Histogram: 1 0 0 0 0 0 0 0 0 1 416s 416s Total # of neighbors = 21000 416s Ave neighs/atom = 21 416s Neighbor list builds = 10 416s Dangerous builds = 0 416s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 416s using 1 OpenMP thread(s) per MPI task 416s Reading restart file ... 416s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 416s restoring atom style atomic from restart 416s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 416s 1 by 1 by 2 MPI processor grid 416s restoring pair style lj/cubic from restart 416s 1000 atoms 416s read_restart CPU = 0.001 seconds 416s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 416s Neighbor list info ... 416s update: every = 1 steps, delay = 0 steps, check = yes 416s max neighbors/atom: 2000, page size: 100000 416s master list distance cutoff = 1.7475372 416s ghost atom cutoff = 1.7475372 416s binsize = 0.87376862, bins = 8 12 12 416s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 416s (1) pair lj/cubic, perpetual 416s attributes: half, newton on 416s pair build: half/bin/atomonly/newton 416s stencil: half/bin/3d 416s bin: standard 416s Setting up Verlet run ... 416s Unit style : lj 416s Current step : 0 416s Time step : 0.001 416s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 416s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 416s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355329 -0.00025901829 9.8684199 0 -0.0048552721 2.3792932 0.0041071767 417s 1000 0.0079519127 0.011915941 -5.50188 -838.80672 35.61641 14.888864 8.9677618 -0.83331675 0.093886135 16.160598 1.5002751 417s 2000 0.019411054 0.029087464 -5.2936665 -1019.5497 41.77353 17.564044 8.8958463 -1.0142851 0.11811209 16.853902 1.687248 417s 3000 0.047492482 0.071167484 -5.3441861 -971.66654 39.02349 16.097707 8.9321705 -0.96639352 0.073376741 16.597136 1.600557 417s 4000 0.12096417 0.18126481 -5.2102393 -1315.5664 40.846153 16.436163 8.9200987 -1.3105374 0.017574117 16.873813 1.6478442 418s 5000 0.1272463 0.19067858 -5.2517864 -1192.2753 39.105833 15.560562 8.9406854 -1.1872142 -0.00025457398 16.689339 1.5950732 418s 6000 0.14515651 0.21751704 -5.1820215 -1372.0064 40.682715 16.119979 8.9220924 -1.3670419 -0.0066818447 16.857436 1.6428451 418s 7000 0.12286771 0.18411727 -5.2596973 -1200.0518 39.255412 15.703071 8.938111 -1.1949762 0.0073588891 16.698492 1.6002966 419s 8000 0.1428801 0.21410583 -5.1748689 -1340.8702 40.704199 16.116121 8.9238602 -1.3359094 -0.0085191302 16.877378 1.6417704 419s 9000 0.12012635 0.18000933 -5.2541332 -1187.2981 39.322347 15.708304 8.9368444 -1.182224 0.0081737382 16.701561 1.6027307 420s 10000 0.1485814 0.22264922 -5.184468 -1359.9408 40.542555 16.055637 8.9246711 -1.3549789 -0.010330357 16.85094 1.6378163 420s Loop time of 3.26963 on 2 procs for 10000 steps with 1000 atoms 420s 420s Performance: 264249.795 tau/day, 3058.447 timesteps/s, 3.058 Matom-step/s 420s 89.6% CPU use with 2 MPI tasks x 1 OpenMP threads 420s 420s MPI task timing breakdown: 420s Section | min time | avg time | max time |%varavg| %total 420s --------------------------------------------------------------- 420s Pair | 1.7107 | 1.7435 | 1.7764 | 2.5 | 53.33 420s Neigh | 0.040984 | 0.04099 | 0.040996 | 0.0 | 1.25 420s Comm | 0.4536 | 0.48545 | 0.5173 | 4.6 | 14.85 420s Output | 0.00067974 | 0.015799 | 0.030918 | 12.0 | 0.48 420s Modify | 0.91908 | 0.93509 | 0.95109 | 1.7 | 28.60 420s Other | | 0.04877 | | | 1.49 420s 420s Nlocal: 500 ave 510 max 490 min 420s Histogram: 1 0 0 0 0 0 0 0 0 1 420s Nghost: 1216.5 ave 1227 max 1206 min 420s Histogram: 1 0 0 0 0 0 0 0 0 1 420s Neighs: 10311 ave 10520 max 10102 min 420s Histogram: 1 0 0 0 0 0 0 0 0 1 420s 420s Total # of neighbors = 20622 420s Ave neighs/atom = 20.622 420s Neighbor list builds = 95 420s Dangerous builds = 0 420s Total wall time: 0:00:09 424s LAMMPS (7 Feb 2024 - Update 1) 424s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 424s using 1 OpenMP thread(s) per MPI task 424s Lattice spacing in x,y,z = 1.4142135 2 2 424s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 424s 1 by 1 by 1 MPI processor grid 424s Created 1000 atoms 424s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 424s create_atoms CPU = 0.000 seconds 424s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 424s Neighbor list info ... 424s update: every = 1 steps, delay = 0 steps, check = yes 424s max neighbors/atom: 2000, page size: 100000 424s master list distance cutoff = 1.8475372 424s ghost atom cutoff = 1.8475372 424s binsize = 0.92376862, bins = 8 11 11 424s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 424s (1) pair lj/cubic, perpetual 424s attributes: half, newton on 424s pair build: half/bin/atomonly/newton 424s stencil: half/bin/3d 424s bin: standard 424s Setting up cg style minimization ... 424s Unit style : lj 424s Current step : 0 424s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 424s (src/min.cpp:219) 424s Per MPI rank memory allocation (min/avg/max) = 4.247 | 4.247 | 4.247 Mbytes 424s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 424s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 424s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 424s 134 0 -6.3344253 -6.3344253 -4.3566216e-13 -4.7438184e-13 -4.6860149e-13 6.9780267 9.8684199 9.8684199 424s Loop time of 0.0506963 on 1 procs for 134 steps with 1000 atoms 424s 424s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads 424s 424s Minimization stats: 424s Stopping criterion = force tolerance 424s Energy initial, next-to-last, final = 424s -6.29375358358556 -6.33442531515503 -6.33442531515503 424s Force two-norm initial, final = 3395.2895 5.6047601e-10 424s Force max component initial, final = 1960.2713 3.2666928e-10 424s Final line search alpha, max atom move = 1 3.2666928e-10 424s Iterations, force evaluations = 134 137 424s 424s MPI task timing breakdown: 424s Section | min time | avg time | max time |%varavg| %total 424s --------------------------------------------------------------- 424s Pair | 0.040003 | 0.040003 | 0.040003 | 0.0 | 78.91 424s Neigh | 0.00086858 | 0.00086858 | 0.00086858 | 0.0 | 1.71 424s Comm | 0.0011557 | 0.0011557 | 0.0011557 | 0.0 | 2.28 424s Output | 2.188e-05 | 2.188e-05 | 2.188e-05 | 0.0 | 0.04 424s Modify | 0 | 0 | 0 | 0.0 | 0.00 424s Other | | 0.008647 | | | 17.06 424s 424s Nlocal: 1000 ave 1000 max 1000 min 424s Histogram: 1 0 0 0 0 0 0 0 0 0 424s Nghost: 1724 ave 1724 max 1724 min 424s Histogram: 1 0 0 0 0 0 0 0 0 0 424s Neighs: 21000 ave 21000 max 21000 min 424s Histogram: 1 0 0 0 0 0 0 0 0 0 424s 424s Total # of neighbors = 21000 424s Ave neighs/atom = 21 424s Neighbor list builds = 1 424s Dangerous builds = 0 424s System init for write_restart ... 424s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 424s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 424s using 1 OpenMP thread(s) per MPI task 424s Reading restart file ... 424s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 424s restoring atom style atomic from restart 424s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 424s 1 by 1 by 1 MPI processor grid 424s restoring pair style lj/cubic from restart 424s 1000 atoms 424s read_restart CPU = 0.001 seconds 424s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 424s Neighbor list info ... 424s update: every = 1 steps, delay = 0 steps, check = yes 424s max neighbors/atom: 2000, page size: 100000 424s master list distance cutoff = 1.7475372 424s ghost atom cutoff = 1.7475372 424s binsize = 0.87376862, bins = 8 12 12 424s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 429s (1) pair lj/cubic, perpetual 429s attributes: half, newton on 429s pair build: half/bin/atomonly/newton 429s stencil: half/bin/3d 429s bin: standard 429s Setting up Verlet run ... 429s Unit style : lj 429s Current step : 0 429s Time step : 0.001 429s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 429s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 429s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 429s 1000 0.0093381492 0.013993217 -2.1704431 -4183.8284 129.15284 58.544409 8.3142517 -4.1816719 0.93744212 23.519052 3.7381985 429s 2000 0.24794859 0.37155095 -5.8915826 -528.38691 8.3849811 1.3744297 9.5938806 -0.52286688 -0.24350394 13.910493 0.41033425 429s 3000 0.3892042 0.5832225 -3.7686896 -3442.3257 72.742382 28.486576 8.6238082 -3.4391402 0.0038227739 19.697354 2.5139569 429s 4000 0.67010303 1.0041494 -4.2080956 -2935.8105 35.596234 3.9346859 8.7508489 -2.9326065 -0.58038927 14.529876 1.6677093 429s 5000 0.41845028 0.62704774 -4.8392822 -1894.6664 30.624319 4.6370699 8.7827304 -1.8904542 -0.31998377 13.670423 1.5249748 429s 6000 0.22409652 0.33580864 -3.7653422 -2666.4156 50.804071 7.220865 8.25496 -2.6629861 -0.017448126 14.48017 2.3883779 429s 7000 0.094832865 0.14210705 -4.5432169 -2337.0271 35.853414 3.4750842 8.4475655 -2.332626 -0.052659777 12.95347 1.8841809 429s 8000 0.043338745 0.06494311 -4.6249402 -1687.4892 39.679004 6.7256868 8.4321684 -1.6829292 0.070571417 13.554654 1.9927395 429s 9000 0.018233343 0.027322664 -4.425909 -1916.4941 41.680023 5.9079935 8.3470382 -1.9120955 0.090887676 13.502397 2.1013348 429s 10000 0.0082616415 0.01238007 -4.6221264 -1723.6542 39.842157 6.5678795 8.41093 -1.7190444 0.099616538 13.484322 2.0113699 429s Loop time of 4.76654 on 1 procs for 10000 steps with 1000 atoms 429s 429s Performance: 181263.468 tau/day, 2097.957 timesteps/s, 2.098 Matom-step/s 429s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 429s 429s MPI task timing breakdown: 429s Section | min time | avg time | max time |%varavg| %total 429s --------------------------------------------------------------- 429s Pair | 3.8696 | 3.8696 | 3.8696 | 0.0 | 81.18 429s Neigh | 0.15741 | 0.15741 | 0.15741 | 0.0 | 3.30 429s Comm | 0.09356 | 0.09356 | 0.09356 | 0.0 | 1.96 429s Output | 0.00047339 | 0.00047339 | 0.00047339 | 0.0 | 0.01 429s Modify | 0.60646 | 0.60646 | 0.60646 | 0.0 | 12.72 429s Other | | 0.03902 | | | 0.82 429s 429s Nlocal: 1000 ave 1000 max 1000 min 429s Histogram: 1 0 0 0 0 0 0 0 0 0 429s Nghost: 1886 ave 1886 max 1886 min 429s Histogram: 1 0 0 0 0 0 0 0 0 0 429s Neighs: 20874 ave 20874 max 20874 min 429s Histogram: 1 0 0 0 0 0 0 0 0 0 429s 429s Total # of neighbors = 20874 429s Ave neighs/atom = 20.874 429s Neighbor list builds = 188 429s Dangerous builds = 0 429s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 429s using 1 OpenMP thread(s) per MPI task 429s Reading restart file ... 429s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 429s restoring atom style atomic from restart 429s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 429s 1 by 1 by 1 MPI processor grid 429s restoring pair style lj/cubic from restart 429s 1000 atoms 429s read_restart CPU = 0.000 seconds 429s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 429s Neighbor list info ... 433s update: every = 1 steps, delay = 0 steps, check = yes 433s max neighbors/atom: 2000, page size: 100000 433s master list distance cutoff = 1.7475372 433s ghost atom cutoff = 1.7475372 433s binsize = 0.87376862, bins = 8 12 12 433s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 433s (1) pair lj/cubic, perpetual 433s attributes: half, newton on 433s pair build: half/bin/atomonly/newton 433s stencil: half/bin/3d 433s bin: standard 433s Setting up Verlet run ... 433s Unit style : lj 433s Current step : 0 433s Time step : 0.001 433s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 433s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 433s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 433s 1000 0.0062572988 0.0093765623 -5.989087 -1670.9191 18.918118 7.5844401 9.2338165 -1.6649394 0.023419337 13.976997 0.92138738 433s 2000 0.0068451081 0.010257394 -5.456581 -2537.81 37.064253 15.537266 8.9496405 -2.5323637 0.10230605 16.325406 1.5455016 433s 3000 0.0073276099 0.010980423 -5.3663421 -2643.8751 39.907292 16.807489 8.9154852 -2.6385198 0.11818116 16.63905 1.6326832 433s 4000 0.0069296906 0.010384141 -5.36234 -2655.7228 40.010742 16.851482 8.9144328 -2.6503709 0.11868137 16.651571 1.6356847 433s 5000 0.0076142461 0.011409948 -5.3631443 -2664.4499 39.997648 16.846756 8.9145416 -2.6590982 0.1184114 16.649779 1.6353254 433s 6000 0.0077053831 0.011546517 -5.3628538 -2673.2444 39.991598 16.840314 8.9145803 -2.667893 0.11818361 16.648852 1.6351691 433s 7000 0.0077405663 0.011599239 -5.3623531 -2682.1589 40.000448 16.844009 8.9145774 -2.6768081 0.11809899 16.650669 1.6353525 433s 8000 0.0080673569 0.012088934 -5.3623755 -2691.0104 39.995327 16.840134 8.9146099 -2.6856601 0.11787103 16.649882 1.6352204 433s 9000 0.0083223083 0.012470979 -5.3622988 -2699.8929 40.00571 16.847764 8.9146503 -2.6945431 0.11781523 16.652389 1.6353987 433s 10000 0.0091249116 0.01367368 -5.3630138 -2708.966 39.987197 16.837314 8.9146848 -2.7036167 0.11743014 16.648832 1.6349911 433s Loop time of 4.05692 on 1 procs for 10000 steps with 1000 atoms 433s 433s Performance: 212969.271 tau/day, 2464.922 timesteps/s, 2.465 Matom-step/s 433s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads 433s 433s MPI task timing breakdown: 433s Section | min time | avg time | max time |%varavg| %total 433s --------------------------------------------------------------- 433s Pair | 3.3816 | 3.3816 | 3.3816 | 0.0 | 83.35 433s Neigh | 0.0092359 | 0.0092359 | 0.0092359 | 0.0 | 0.23 433s Comm | 0.080634 | 0.080634 | 0.080634 | 0.0 | 1.99 433s Output | 0.00047291 | 0.00047291 | 0.00047291 | 0.0 | 0.01 433s Modify | 0.54908 | 0.54908 | 0.54908 | 0.0 | 13.53 433s Other | | 0.03591 | | | 0.89 433s 433s Nlocal: 1000 ave 1000 max 1000 min 433s Histogram: 1 0 0 0 0 0 0 0 0 0 433s Nghost: 1724 ave 1724 max 1724 min 433s Histogram: 1 0 0 0 0 0 0 0 0 0 433s Neighs: 21000 ave 21000 max 21000 min 433s Histogram: 1 0 0 0 0 0 0 0 0 0 433s 433s Total # of neighbors = 21000 433s Ave neighs/atom = 21 433s Neighbor list builds = 11 433s Dangerous builds = 0 433s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 433s using 1 OpenMP thread(s) per MPI task 433s Reading restart file ... 433s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 433s restoring atom style atomic from restart 439s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 439s 1 by 1 by 1 MPI processor grid 439s restoring pair style lj/cubic from restart 439s 1000 atoms 439s read_restart CPU = 0.000 seconds 439s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 439s Neighbor list info ... 439s update: every = 1 steps, delay = 0 steps, check = yes 439s max neighbors/atom: 2000, page size: 100000 439s master list distance cutoff = 1.7475372 439s ghost atom cutoff = 1.7475372 439s binsize = 0.87376862, bins = 8 12 12 439s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 439s (1) pair lj/cubic, perpetual 439s attributes: half, newton on 439s pair build: half/bin/atomonly/newton 439s stencil: half/bin/3d 439s bin: standard 439s Setting up Verlet run ... 439s Unit style : lj 439s Current step : 0 439s Time step : 0.001 439s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 439s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 439s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 439s 1000 0.0083300318 0.012482553 -5.5023183 -838.99233 35.610078 14.886668 8.9677982 -0.83350249 0.093761717 16.159482 1.500112 439s 2000 0.020386436 0.030549075 -5.294934 -1021.4347 41.760404 17.563313 8.8960328 -1.0161703 0.1178086 16.852842 1.6868239 439s 3000 0.049693082 0.074465084 -5.3469418 -982.1922 39.030412 16.123502 8.9325589 -0.97691972 0.073097533 16.601991 1.6003728 439s 4000 0.11859524 0.17771497 -5.207074 -1299.948 40.941639 16.507821 8.9213137 -1.2949186 0.018189971 16.904165 1.6487306 439s 5000 0.130146 0.19502378 -5.261025 -1208.3405 39.059595 15.609328 8.9431689 -1.2032745 -0.00023811036 16.701434 1.5920334 439s 6000 0.13812959 0.20698719 -5.1710048 -1334.1421 40.904888 16.242199 8.9222846 -1.329178 -0.0044756362 16.90509 1.6471606 439s 7000 0.12107441 0.18143001 -5.2602562 -1170.0585 39.060849 15.577606 8.9397535 -1.1649797 0.005587398 16.671517 1.5949415 439s 8000 0.14333426 0.21478639 -5.1717109 -1352.635 40.876285 16.205871 8.9218128 -1.3476781 -0.0069373292 16.895041 1.6469877 439s 9000 0.12159783 0.18221435 -5.2591928 -1186.8604 39.22852 15.6778 8.9376658 -1.1817834 0.0077335044 16.68885 1.6001243 439s 10000 0.15321647 0.22959488 -5.188176 -1391.2245 40.666599 16.146259 8.9228489 -1.3862659 -0.0091900905 16.860718 1.6418747 439s Loop time of 4.67148 on 1 procs for 10000 steps with 1000 atoms 439s 439s Performance: 184952.172 tau/day, 2140.650 timesteps/s, 2.141 Matom-step/s 439s 98.7% CPU use with 1 MPI tasks x 1 OpenMP threads 439s 439s MPI task timing breakdown: 439s Section | min time | avg time | max time |%varavg| %total 439s --------------------------------------------------------------- 439s Pair | 3.468 | 3.468 | 3.468 | 0.0 | 74.24 439s Neigh | 0.39301 | 0.39301 | 0.39301 | 0.0 | 8.41 439s Comm | 0.090908 | 0.090908 | 0.090908 | 0.0 | 1.95 439s Output | 0.00066843 | 0.00066843 | 0.00066843 | 0.0 | 0.01 439s Modify | 0.67659 | 0.67659 | 0.67659 | 0.0 | 14.48 439s Other | | 0.04235 | | | 0.91 439s 439s Nlocal: 1000 ave 1000 max 1000 min 439s Histogram: 1 0 0 0 0 0 0 0 0 0 439s Nghost: 1724 ave 1724 max 1724 min 439s Histogram: 1 0 0 0 0 0 0 0 0 0 439s Neighs: 20654 ave 20654 max 20654 min 439s Histogram: 1 0 0 0 0 0 0 0 0 0 439s 439s Total # of neighbors = 20654 439s Ave neighs/atom = 20.654 439s Neighbor list builds = 94 439s Dangerous builds = 0 439s Total wall time: 0:00:13 440s run: OK 440s autopkgtest [11:36:05]: test hugo: -----------------------] 441s autopkgtest [11:36:06]: test hugo: - - - - - - - - - - results - - - - - - - - - - 441s hugo PASS 442s autopkgtest [11:36:07]: test command1: preparing testbed 568s autopkgtest [11:38:13]: testbed dpkg architecture: arm64 568s autopkgtest [11:38:13]: testbed apt version: 2.7.12 568s autopkgtest [11:38:13]: @@@@@@@@@@@@@@@@@@@@ test bed setup 569s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 569s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [486 kB] 569s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.7 kB] 569s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3768 kB] 570s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 570s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [659 kB] 570s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 570s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB] 570s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 570s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4142 kB] 570s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 570s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [56.7 kB] 570s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 572s Fetched 9334 kB in 2s (5425 kB/s) 572s Reading package lists... 575s Reading package lists... 575s Building dependency tree... 575s Reading state information... 576s Calculating upgrade... 576s The following packages will be REMOVED: 576s libreadline8 libssl3 576s The following NEW packages will be installed: 576s libreadline8t64 libssl3t64 576s The following packages have been kept back: 576s libpython3.12-minimal libpython3.12-stdlib python3.12 python3.12-minimal 576s The following packages will be upgraded: 576s openssl readline-common 577s 2 upgraded, 2 newly installed, 2 to remove and 4 not upgraded. 577s Need to get 2987 kB of archives. 577s After this operation, 207 kB of additional disk space will be used. 577s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB] 577s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB] 577s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu2 [985 kB] 577s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu2 [1793 kB] 578s Fetched 2987 kB in 1s (4024 kB/s) 578s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 578s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 578s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 579s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested: 579s parted depends on libreadline8 (>= 6.0). 579s libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta). 579s gpgsm depends on libreadline8 (>= 6.0). 579s gpgconf depends on libreadline8 (>= 6.0). 579s gpg depends on libreadline8 (>= 6.0). 579s gawk depends on libreadline8 (>= 6.0). 579s fdisk depends on libreadline8 (>= 6.0). 579s 579s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74758 files and directories currently installed.) 579s Removing libreadline8:arm64 (8.2-3) ... 579s Selecting previously unselected package libreadline8t64:arm64. 579s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74746 files and directories currently installed.) 579s Preparing to unpack .../libreadline8t64_8.2-3.1_arm64.deb ... 579s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 579s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 579s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 579s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 579s Unpacking libreadline8t64:arm64 (8.2-3.1) ... 579s Preparing to unpack .../openssl_3.0.13-0ubuntu2_arm64.deb ... 579s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 579s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: 579s wget depends on libssl3 (>= 3.0.0). 579s u-boot-tools depends on libssl3 (>= 3.0.0). 579s tnftp depends on libssl3 (>= 3.0.0). 579s tcpdump depends on libssl3 (>= 3.0.0). 579s systemd-resolved depends on libssl3 (>= 3.0.0). 579s systemd depends on libssl3 (>= 3.0.0). 579s sudo depends on libssl3 (>= 3.0.0). 579s sbsigntool depends on libssl3 (>= 3.0.0). 579s rsync depends on libssl3 (>= 3.0.0). 579s python3-cryptography depends on libssl3 (>= 3.0.0). 579s openssh-server depends on libssl3 (>= 3.0.10). 579s openssh-client depends on libssl3 (>= 3.0.10). 579s mtd-utils depends on libssl3 (>= 3.0.0). 579s mokutil depends on libssl3 (>= 3.0.0). 579s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 579s libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0). 579s libssh-4:arm64 depends on libssl3 (>= 3.0.0). 579s libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0). 579s libsasl2-2:arm64 depends on libssl3 (>= 3.0.0). 579s libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0). 579s libnvme1 depends on libssl3 (>= 3.0.0). 579s libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). 579s libkmod2:arm64 depends on libssl3 (>= 3.0.0). 579s libfido2-1:arm64 depends on libssl3 (>= 3.0.0). 579s libcurl4:arm64 depends on libssl3 (>= 3.0.0). 579s libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0). 579s kmod depends on libssl3 (>= 3.0.0). 579s dhcpcd-base depends on libssl3 (>= 3.0.0). 579s bind9-libs:arm64 depends on libssl3 (>= 3.0.0). 579s 579s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74766 files and directories currently installed.) 579s Removing libssl3:arm64 (3.0.10-1ubuntu4) ... 580s Selecting previously unselected package libssl3t64:arm64. 580s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74755 files and directories currently installed.) 580s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_arm64.deb ... 580s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu2) ... 580s Setting up libssl3t64:arm64 (3.0.13-0ubuntu2) ... 580s Setting up openssl (3.0.13-0ubuntu2) ... 580s Setting up readline-common (8.2-3.1) ... 580s Setting up libreadline8t64:arm64 (8.2-3.1) ... 580s Processing triggers for libc-bin (2.39-0ubuntu2) ... 580s Processing triggers for man-db (2.12.0-3) ... 581s Processing triggers for install-info (7.1-3) ... 581s Reading package lists... 581s Building dependency tree... 581s Reading state information... 582s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 583s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 583s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 583s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 583s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 585s Reading package lists... 585s Reading package lists... 585s Building dependency tree... 585s Reading state information... 586s Calculating upgrade... 586s The following packages have been kept back: 586s libpython3.12-minimal libpython3.12-stdlib python3.12 python3.12-minimal 586s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 586s Reading package lists... 587s Building dependency tree... 587s Reading state information... 587s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 595s Reading package lists... 596s Building dependency tree... 596s Reading state information... 596s Starting pkgProblemResolver with broken count: 0 596s Starting 2 pkgProblemResolver with broken count: 0 596s Done 597s The following additional packages will be installed: 597s autoconf automake autotools-dev cpp-12 fontconfig-config fonts-dejavu-core 597s fonts-dejavu-mono gcc-12 gcc-12-base gfortran-12 libaec0 libamd-comgr2 597s libamdhip64-5 libasan8 libatomic1 libblas3 libc-dev-bin libc6-dev libcairo2 597s libcc1-0 libcrypt-dev libdeflate0 libdouble-conversion3 libdrm-amdgpu1 597s libdrm-nouveau2 libdrm-radeon1 libevent-2.1-7 libevent-dev 597s libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 597s libfabric1 libfftw3-double3 libfontconfig1 libgcc-12-dev libgfortran-12-dev 597s libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglew2.2 597s libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-103-1 libhdf5-hl-100 597s libhsa-runtime64-1 libhsakmt1 libhwasan0 libhwloc-dev libhwloc-plugins 597s libhwloc15 libibverbs-dev libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 597s libjs-jquery libjs-jquery-ui libjsoncpp25 libkim-api2 liblammps-dev 597s liblammps0 liblapack3 liblerc4 libllvm17 liblsan0 libltdl-dev libltdl7 597s libmpc3 libmunge2 libnetcdf19 libnl-3-dev libnl-route-3-dev libnsl-dev 597s libnuma-dev libogg0 libopengl0 libopenmpi-dev libopenmpi3 libpciaccess0 597s libpixman-1-0 libpmix-dev libpmix2 libpnetcdf0d libproj25 libpython3.12 597s librdmacm1t64 libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 597s libtcl8.6 libtheora0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 597s libucx0 libvoro++1 libvtk9.1 libvulkan1 libwebp7 libx11-xcb1 libxcb-dri2-0 597s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 597s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxfixes3 libxft2 libxnvctrl0 597s libxrender1 libxshmfence1 libxss1 libxxf86vm1 linux-libc-dev m4 597s mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin 597s openmpi-common proj-data python3-lammps rpcsvc-proto x11-common zlib1g-dev 597s Suggested packages: 597s autoconf-archive gnu-standards autoconf-doc libtool gettext gcc-12-locales 597s cpp-12-doc gcc-12-doc gfortran-12-doc libcoarrays-dev glibc-doc manpages-dev 597s libfftw3-bin libfftw3-dev glew-utils libjs-jquery-ui-docs libtool-doc 597s openmpi-doc proj-bin tcl8.6 tk8.6 vtk9-doc vtk9-examples m4-doc opencl-icd 597s gfortran | fortran-compiler 597s Recommended packages: 597s manpages manpages-dev libc-devtools libgl1-amber-dri javascript-common 597s lammps-doc libtool libcoarrays-openmpi-dev mesa-vulkan-drivers | vulkan-icd 597s python3-mpi4py 597s The following NEW packages will be installed: 597s autoconf automake autopkgtest-satdep autotools-dev cpp-12 fontconfig-config 597s fonts-dejavu-core fonts-dejavu-mono gcc-12 gcc-12-base gfortran-12 libaec0 597s libamd-comgr2 libamdhip64-5 libasan8 libatomic1 libblas3 libc-dev-bin 597s libc6-dev libcairo2 libcc1-0 libcrypt-dev libdeflate0 libdouble-conversion3 597s libdrm-amdgpu1 libdrm-nouveau2 libdrm-radeon1 libevent-2.1-7 libevent-dev 597s libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 597s libfabric1 libfftw3-double3 libfontconfig1 libgcc-12-dev libgfortran-12-dev 597s libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglew2.2 597s libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-103-1 libhdf5-hl-100 597s libhsa-runtime64-1 libhsakmt1 libhwasan0 libhwloc-dev libhwloc-plugins 597s libhwloc15 libibverbs-dev libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 597s libjs-jquery libjs-jquery-ui libjsoncpp25 libkim-api2 liblammps-dev 597s liblammps0 liblapack3 liblerc4 libllvm17 liblsan0 libltdl-dev libltdl7 597s libmpc3 libmunge2 libnetcdf19 libnl-3-dev libnl-route-3-dev libnsl-dev 597s libnuma-dev libogg0 libopengl0 libopenmpi-dev libopenmpi3 libpciaccess0 597s libpixman-1-0 libpmix-dev libpmix2 libpnetcdf0d libproj25 libpython3.12 597s librdmacm1t64 libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 597s libtcl8.6 libtheora0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 597s libucx0 libvoro++1 libvtk9.1 libvulkan1 libwebp7 libx11-xcb1 libxcb-dri2-0 597s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 597s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxfixes3 libxft2 libxnvctrl0 597s libxrender1 libxshmfence1 libxss1 libxxf86vm1 linux-libc-dev m4 597s mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin 597s openmpi-common proj-data python3-lammps rpcsvc-proto x11-common zlib1g-dev 597s 0 upgraded, 138 newly installed, 0 to remove and 4 not upgraded. 597s Need to get 174 MB/174 MB of archives. 597s After this operation, 703 MB of additional disk space will be used. 597s Get:1 /tmp/autopkgtest.1kosEq/7-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [712 B] 597s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 m4 arm64 1.4.19-4 [240 kB] 597s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 autoconf all 2.71-3 [339 kB] 597s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 autotools-dev all 20220109.1 [44.9 kB] 597s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 598s Get:6 http://ftpmaster.internal/ubuntu noble/universe arm64 gcc-12-base arm64 12.3.0-15ubuntu1 [45.5 kB] 598s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 598s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 598s Get:9 http://ftpmaster.internal/ubuntu noble/universe arm64 cpp-12 arm64 12.3.0-15ubuntu1 [9585 kB] 598s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 598s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 598s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB] 598s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB] 598s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB] 598s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB] 598s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB] 598s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB] 598s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB] 598s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB] 598s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB] 598s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB] 598s Get:22 http://ftpmaster.internal/ubuntu noble/universe arm64 libgcc-12-dev arm64 12.3.0-15ubuntu1 [1157 kB] 598s Get:23 http://ftpmaster.internal/ubuntu noble/universe arm64 gcc-12 arm64 12.3.0-15ubuntu1 [19.1 MB] 599s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB] 599s Get:25 http://ftpmaster.internal/ubuntu noble/universe arm64 libgfortran-12-dev arm64 12.3.0-15ubuntu1 [471 kB] 599s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB] 599s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB] 599s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB] 599s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB] 599s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 599s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 599s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB] 599s Get:33 http://ftpmaster.internal/ubuntu noble/universe arm64 gfortran-12 arm64 12.3.0-15ubuntu1 [10.1 MB] 600s Get:34 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 600s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libllvm17 arm64 1:17.0.6-5build1 [25.0 MB] 601s Get:36 http://ftpmaster.internal/ubuntu noble/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3 [14.1 MB] 601s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-amdgpu1 arm64 2.4.120-2 [20.4 kB] 601s Get:38 http://ftpmaster.internal/ubuntu noble/universe arm64 libhsakmt1 arm64 5.7.0-1 [63.6 kB] 601s Get:39 http://ftpmaster.internal/ubuntu noble/universe arm64 libhsa-runtime64-1 arm64 5.7.1-1 [286 kB] 601s Get:40 http://ftpmaster.internal/ubuntu noble/universe arm64 libamdhip64-5 arm64 5.2.3-12 [5134 kB] 602s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB] 602s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB] 602s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB] 602s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 602s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 602s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 602s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB] 602s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB] 602s Get:49 http://ftpmaster.internal/ubuntu noble/universe arm64 libdouble-conversion3 arm64 3.3.0-1 [37.2 kB] 602s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-nouveau2 arm64 2.4.120-2 [17.8 kB] 602s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-radeon1 arm64 2.4.120-2 [20.9 kB] 602s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libevent-2.1-7 arm64 2.1.12-stable-9 [138 kB] 602s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libevent-extra-2.1-7 arm64 2.1.12-stable-9 [61.3 kB] 602s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libevent-pthreads-2.1-7 arm64 2.1.12-stable-9 [7738 B] 602s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libevent-openssl-2.1-7 arm64 2.1.12-stable-9 [14.6 kB] 602s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libevent-dev arm64 2.1.12-stable-9 [282 kB] 602s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 librdmacm1t64 arm64 50.0-2 [70.6 kB] 602s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 libfabric1 arm64 1.17.0-3 [537 kB] 602s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libfftw3-double3 arm64 3.3.10-1ubuntu1 [380 kB] 602s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libvulkan1 arm64 1.3.275.0-1 [150 kB] 602s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libglapi-mesa arm64 24.0.1-1ubuntu1 [57.8 kB] 602s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-dri3-0 arm64 1.15-1 [7108 B] 602s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libgl1-mesa-dri arm64 24.0.1-1ubuntu1 [8226 kB] 602s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libglvnd0 arm64 1.7.0-1 [60.0 kB] 602s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libx11-xcb1 arm64 2:1.8.7-1 [7836 B] 602s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-dri2-0 arm64 1.15-1 [7244 B] 602s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-glx0 arm64 1.15-1 [25.2 kB] 602s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-present0 arm64 1.15-1 [5732 B] 602s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-randr0 arm64 1.15-1 [18.2 kB] 602s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-sync1 arm64 1.15-1 [9412 B] 602s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-xfixes0 arm64 1.15-1 [10.3 kB] 602s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libxfixes3 arm64 1:6.0.0-2 [11.0 kB] 602s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libxshmfence1 arm64 1.3-1build4 [5444 B] 602s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libxxf86vm1 arm64 1:1.1.4-1build3 [10.3 kB] 602s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libglx-mesa0 arm64 24.0.1-1ubuntu1 [166 kB] 602s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 libglx0 arm64 1.7.0-1 [32.4 kB] 602s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libgl1 arm64 1.7.0-1 [107 kB] 602s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 libgl2ps1.4 arm64 1.4.2+dfsg1-2 [41.5 kB] 602s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 libglew2.2 arm64 2.2.0-4 [200 kB] 602s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 602s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.10+repack-3ubuntu1 [1189 kB] 602s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB] 602s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libhwloc15 arm64 2.10.0-1 [158 kB] 602s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 602s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 602s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 602s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 602s Get:88 http://ftpmaster.internal/ubuntu noble/main arm64 libjsoncpp25 arm64 1.9.5-6 [76.0 kB] 602s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libkim-api2 arm64 2.3.0-1 [554 kB] 602s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB] 602s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libnetcdf19 arm64 1:4.9.2-3ubuntu1 [470 kB] 602s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libmunge2 arm64 0.5.15-3ubuntu1 [14.8 kB] 602s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libpciaccess0 arm64 0.17-3 [18.6 kB] 602s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu1 [11.1 kB] 602s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1 [37.3 kB] 602s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libhwloc-plugins arm64 2.10.0-1 [15.7 kB] 602s Get:97 http://ftpmaster.internal/ubuntu noble/universe arm64 libpmix2 arm64 5.0.1-4 [659 kB] 602s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libucx0 arm64 1.16.0+ds-4 [1076 kB] 603s Get:99 http://ftpmaster.internal/ubuntu noble/universe arm64 libopenmpi3 arm64 4.1.6-5ubuntu1 [3081 kB] 603s Get:100 http://ftpmaster.internal/ubuntu noble/universe arm64 libpnetcdf0d arm64 1.12.3-2 [842 kB] 603s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12 arm64 3.12.2-1 [2291 kB] 603s Get:102 http://ftpmaster.internal/ubuntu noble/universe arm64 libvoro++1 arm64 0.5+revert-to-0.4.6+dfsg1-1 [101 kB] 603s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libogg0 arm64 1.3.5-3 [22.1 kB] 603s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libopengl0 arm64 1.7.0-1 [35.9 kB] 603s Get:105 http://ftpmaster.internal/ubuntu noble/universe arm64 proj-data all 9.3.1-1 [7867 kB] 604s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 604s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB] 604s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB] 604s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB] 604s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB] 604s Get:111 http://ftpmaster.internal/ubuntu noble/universe arm64 libproj25 arm64 9.3.1-1 [1261 kB] 604s Get:112 http://ftpmaster.internal/ubuntu noble/universe arm64 libtbbmalloc2 arm64 2021.11.0-2ubuntu2 [43.8 kB] 604s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 libtbbbind-2-5 arm64 2021.11.0-2ubuntu2 [16.4 kB] 604s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 libtbb12 arm64 2021.11.0-2ubuntu2 [79.9 kB] 604s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 604s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libtheora0 arm64 1.1.1+dfsg.1-16.1 [221 kB] 604s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 604s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 604s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 604s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 604s Get:121 http://ftpmaster.internal/ubuntu noble/universe arm64 libvtk9.1 arm64 9.1.0+really9.1.0+dfsg2-7build1 [19.2 MB] 606s Get:122 http://ftpmaster.internal/ubuntu noble/universe arm64 liblammps0 arm64 20240207+dfsg-1 [6751 kB] 606s Get:123 http://ftpmaster.internal/ubuntu noble/universe arm64 openmpi-common all 4.1.6-5ubuntu1 [178 kB] 606s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libnl-3-dev arm64 3.7.0-0.3 [105 kB] 606s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 libnl-route-3-dev arm64 3.7.0-0.3 [225 kB] 606s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 libibverbs-dev arm64 50.0-2 [686 kB] 606s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 libnuma-dev arm64 2.0.18-1 [39.5 kB] 606s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libltdl7 arm64 2.4.7-7 [40.3 kB] 606s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 libltdl-dev arm64 2.4.7-7 [170 kB] 606s Get:130 http://ftpmaster.internal/ubuntu noble/universe arm64 libhwloc-dev arm64 2.10.0-1 [259 kB] 606s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3ubuntu1 [895 kB] 606s Get:132 http://ftpmaster.internal/ubuntu noble/universe arm64 libpmix-dev arm64 5.0.1-4 [4017 kB] 606s Get:133 http://ftpmaster.internal/ubuntu noble/universe arm64 openmpi-bin arm64 4.1.6-5ubuntu1 [123 kB] 606s Get:134 http://ftpmaster.internal/ubuntu noble/universe arm64 libopenmpi-dev arm64 4.1.6-5ubuntu1 [1713 kB] 606s Get:135 http://ftpmaster.internal/ubuntu noble/universe arm64 mpi-default-dev arm64 1.15 [3118 B] 606s Get:136 http://ftpmaster.internal/ubuntu noble/universe arm64 liblammps-dev arm64 20240207+dfsg-1 [112 kB] 606s Get:137 http://ftpmaster.internal/ubuntu noble/universe arm64 mpi-default-bin arm64 1.15 [2336 B] 606s Get:138 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-lammps arm64 20240207+dfsg-1 [70.4 kB] 607s Fetched 174 MB in 9s (18.6 MB/s) 607s Selecting previously unselected package m4. 607s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74768 files and directories currently installed.) 607s Preparing to unpack .../000-m4_1.4.19-4_arm64.deb ... 607s Unpacking m4 (1.4.19-4) ... 607s Selecting previously unselected package autoconf. 607s Preparing to unpack .../001-autoconf_2.71-3_all.deb ... 607s Unpacking autoconf (2.71-3) ... 607s Selecting previously unselected package autotools-dev. 607s Preparing to unpack .../002-autotools-dev_20220109.1_all.deb ... 607s Unpacking autotools-dev (20220109.1) ... 607s Selecting previously unselected package automake. 607s Preparing to unpack .../003-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 607s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 608s Selecting previously unselected package gcc-12-base:arm64. 608s Preparing to unpack .../004-gcc-12-base_12.3.0-15ubuntu1_arm64.deb ... 608s Unpacking gcc-12-base:arm64 (12.3.0-15ubuntu1) ... 608s Selecting previously unselected package libisl23:arm64. 608s Preparing to unpack .../005-libisl23_0.26-3_arm64.deb ... 608s Unpacking libisl23:arm64 (0.26-3) ... 608s Selecting previously unselected package libmpc3:arm64. 608s Preparing to unpack .../006-libmpc3_1.3.1-1_arm64.deb ... 608s Unpacking libmpc3:arm64 (1.3.1-1) ... 608s Selecting previously unselected package cpp-12. 608s Preparing to unpack .../007-cpp-12_12.3.0-15ubuntu1_arm64.deb ... 608s Unpacking cpp-12 (12.3.0-15ubuntu1) ... 608s Selecting previously unselected package fonts-dejavu-mono. 608s Preparing to unpack .../008-fonts-dejavu-mono_2.37-8_all.deb ... 608s Unpacking fonts-dejavu-mono (2.37-8) ... 608s Selecting previously unselected package fonts-dejavu-core. 608s Preparing to unpack .../009-fonts-dejavu-core_2.37-8_all.deb ... 608s Unpacking fonts-dejavu-core (2.37-8) ... 608s Selecting previously unselected package fontconfig-config. 608s Preparing to unpack .../010-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ... 608s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 608s Selecting previously unselected package libcc1-0:arm64. 608s Preparing to unpack .../011-libcc1-0_14-20240303-1ubuntu1_arm64.deb ... 608s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ... 608s Selecting previously unselected package libgomp1:arm64. 608s Preparing to unpack .../012-libgomp1_14-20240303-1ubuntu1_arm64.deb ... 608s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ... 609s Selecting previously unselected package libitm1:arm64. 609s Preparing to unpack .../013-libitm1_14-20240303-1ubuntu1_arm64.deb ... 609s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ... 609s Selecting previously unselected package libatomic1:arm64. 609s Preparing to unpack .../014-libatomic1_14-20240303-1ubuntu1_arm64.deb ... 609s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ... 609s Selecting previously unselected package libasan8:arm64. 609s Preparing to unpack .../015-libasan8_14-20240303-1ubuntu1_arm64.deb ... 609s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ... 609s Selecting previously unselected package liblsan0:arm64. 609s Preparing to unpack .../016-liblsan0_14-20240303-1ubuntu1_arm64.deb ... 609s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ... 609s Selecting previously unselected package libtsan2:arm64. 609s Preparing to unpack .../017-libtsan2_14-20240303-1ubuntu1_arm64.deb ... 609s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ... 609s Selecting previously unselected package libubsan1:arm64. 609s Preparing to unpack .../018-libubsan1_14-20240303-1ubuntu1_arm64.deb ... 609s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ... 609s Selecting previously unselected package libhwasan0:arm64. 609s Preparing to unpack .../019-libhwasan0_14-20240303-1ubuntu1_arm64.deb ... 609s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ... 609s Selecting previously unselected package libgcc-12-dev:arm64. 609s Preparing to unpack .../020-libgcc-12-dev_12.3.0-15ubuntu1_arm64.deb ... 609s Unpacking libgcc-12-dev:arm64 (12.3.0-15ubuntu1) ... 609s Selecting previously unselected package gcc-12. 609s Preparing to unpack .../021-gcc-12_12.3.0-15ubuntu1_arm64.deb ... 609s Unpacking gcc-12 (12.3.0-15ubuntu1) ... 610s Selecting previously unselected package libgfortran5:arm64. 610s Preparing to unpack .../022-libgfortran5_14-20240303-1ubuntu1_arm64.deb ... 610s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ... 610s Selecting previously unselected package libgfortran-12-dev:arm64. 610s Preparing to unpack .../023-libgfortran-12-dev_12.3.0-15ubuntu1_arm64.deb ... 610s Unpacking libgfortran-12-dev:arm64 (12.3.0-15ubuntu1) ... 610s Selecting previously unselected package libc-dev-bin. 610s Preparing to unpack .../024-libc-dev-bin_2.39-0ubuntu2_arm64.deb ... 610s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 610s Selecting previously unselected package linux-libc-dev:arm64. 610s Preparing to unpack .../025-linux-libc-dev_6.8.0-11.11_arm64.deb ... 610s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ... 610s Selecting previously unselected package libcrypt-dev:arm64. 610s Preparing to unpack .../026-libcrypt-dev_1%3a4.4.36-4_arm64.deb ... 610s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ... 610s Selecting previously unselected package libtirpc-dev:arm64. 610s Preparing to unpack .../027-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ... 610s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 610s Selecting previously unselected package libnsl-dev:arm64. 610s Preparing to unpack .../028-libnsl-dev_1.3.0-3_arm64.deb ... 610s Unpacking libnsl-dev:arm64 (1.3.0-3) ... 610s Selecting previously unselected package rpcsvc-proto. 610s Preparing to unpack .../029-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ... 610s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 610s Selecting previously unselected package libc6-dev:arm64. 610s Preparing to unpack .../030-libc6-dev_2.39-0ubuntu2_arm64.deb ... 610s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ... 610s Selecting previously unselected package gfortran-12. 610s Preparing to unpack .../031-gfortran-12_12.3.0-15ubuntu1_arm64.deb ... 610s Unpacking gfortran-12 (12.3.0-15ubuntu1) ... 611s Selecting previously unselected package libaec0:arm64. 611s Preparing to unpack .../032-libaec0_1.1.2-1_arm64.deb ... 611s Unpacking libaec0:arm64 (1.1.2-1) ... 611s Selecting previously unselected package libllvm17:arm64. 611s Preparing to unpack .../033-libllvm17_1%3a17.0.6-5build1_arm64.deb ... 611s Unpacking libllvm17:arm64 (1:17.0.6-5build1) ... 611s Selecting previously unselected package libamd-comgr2:arm64. 611s Preparing to unpack .../034-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3_arm64.deb ... 611s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3) ... 612s Selecting previously unselected package libdrm-amdgpu1:arm64. 612s Preparing to unpack .../035-libdrm-amdgpu1_2.4.120-2_arm64.deb ... 612s Unpacking libdrm-amdgpu1:arm64 (2.4.120-2) ... 612s Selecting previously unselected package libhsakmt1:arm64. 612s Preparing to unpack .../036-libhsakmt1_5.7.0-1_arm64.deb ... 612s Unpacking libhsakmt1:arm64 (5.7.0-1) ... 612s Selecting previously unselected package libhsa-runtime64-1. 612s Preparing to unpack .../037-libhsa-runtime64-1_5.7.1-1_arm64.deb ... 612s Unpacking libhsa-runtime64-1 (5.7.1-1) ... 612s Selecting previously unselected package libamdhip64-5. 612s Preparing to unpack .../038-libamdhip64-5_5.2.3-12_arm64.deb ... 612s Unpacking libamdhip64-5 (5.2.3-12) ... 612s Selecting previously unselected package libblas3:arm64. 612s Preparing to unpack .../039-libblas3_3.12.0-3_arm64.deb ... 612s Unpacking libblas3:arm64 (3.12.0-3) ... 612s Selecting previously unselected package libfontconfig1:arm64. 612s Preparing to unpack .../040-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ... 612s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 612s Selecting previously unselected package libpixman-1-0:arm64. 612s Preparing to unpack .../041-libpixman-1-0_0.42.2-1_arm64.deb ... 612s Unpacking libpixman-1-0:arm64 (0.42.2-1) ... 612s Selecting previously unselected package libxcb-render0:arm64. 612s Preparing to unpack .../042-libxcb-render0_1.15-1_arm64.deb ... 612s Unpacking libxcb-render0:arm64 (1.15-1) ... 612s Selecting previously unselected package libxcb-shm0:arm64. 612s Preparing to unpack .../043-libxcb-shm0_1.15-1_arm64.deb ... 612s Unpacking libxcb-shm0:arm64 (1.15-1) ... 612s Selecting previously unselected package libxrender1:arm64. 612s Preparing to unpack .../044-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 612s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 612s Selecting previously unselected package libcairo2:arm64. 612s Preparing to unpack .../045-libcairo2_1.18.0-1_arm64.deb ... 612s Unpacking libcairo2:arm64 (1.18.0-1) ... 612s Selecting previously unselected package libdeflate0:arm64. 612s Preparing to unpack .../046-libdeflate0_1.19-1_arm64.deb ... 612s Unpacking libdeflate0:arm64 (1.19-1) ... 612s Selecting previously unselected package libdouble-conversion3:arm64. 612s Preparing to unpack .../047-libdouble-conversion3_3.3.0-1_arm64.deb ... 612s Unpacking libdouble-conversion3:arm64 (3.3.0-1) ... 612s Selecting previously unselected package libdrm-nouveau2:arm64. 612s Preparing to unpack .../048-libdrm-nouveau2_2.4.120-2_arm64.deb ... 612s Unpacking libdrm-nouveau2:arm64 (2.4.120-2) ... 612s Selecting previously unselected package libdrm-radeon1:arm64. 612s Preparing to unpack .../049-libdrm-radeon1_2.4.120-2_arm64.deb ... 612s Unpacking libdrm-radeon1:arm64 (2.4.120-2) ... 612s Selecting previously unselected package libevent-2.1-7:arm64. 612s Preparing to unpack .../050-libevent-2.1-7_2.1.12-stable-9_arm64.deb ... 612s Unpacking libevent-2.1-7:arm64 (2.1.12-stable-9) ... 612s Selecting previously unselected package libevent-extra-2.1-7:arm64. 612s Preparing to unpack .../051-libevent-extra-2.1-7_2.1.12-stable-9_arm64.deb ... 612s Unpacking libevent-extra-2.1-7:arm64 (2.1.12-stable-9) ... 612s Selecting previously unselected package libevent-pthreads-2.1-7:arm64. 612s Preparing to unpack .../052-libevent-pthreads-2.1-7_2.1.12-stable-9_arm64.deb ... 612s Unpacking libevent-pthreads-2.1-7:arm64 (2.1.12-stable-9) ... 612s Selecting previously unselected package libevent-openssl-2.1-7:arm64. 612s Preparing to unpack .../053-libevent-openssl-2.1-7_2.1.12-stable-9_arm64.deb ... 612s Unpacking libevent-openssl-2.1-7:arm64 (2.1.12-stable-9) ... 612s Selecting previously unselected package libevent-dev. 612s Preparing to unpack .../054-libevent-dev_2.1.12-stable-9_arm64.deb ... 612s Unpacking libevent-dev (2.1.12-stable-9) ... 612s Selecting previously unselected package librdmacm1t64:arm64. 612s Preparing to unpack .../055-librdmacm1t64_50.0-2_arm64.deb ... 612s Unpacking librdmacm1t64:arm64 (50.0-2) ... 612s Selecting previously unselected package libfabric1:arm64. 612s Preparing to unpack .../056-libfabric1_1.17.0-3_arm64.deb ... 612s Unpacking libfabric1:arm64 (1.17.0-3) ... 612s Selecting previously unselected package libfftw3-double3:arm64. 612s Preparing to unpack .../057-libfftw3-double3_3.3.10-1ubuntu1_arm64.deb ... 612s Unpacking libfftw3-double3:arm64 (3.3.10-1ubuntu1) ... 613s Selecting previously unselected package libvulkan1:arm64. 613s Preparing to unpack .../058-libvulkan1_1.3.275.0-1_arm64.deb ... 613s Unpacking libvulkan1:arm64 (1.3.275.0-1) ... 613s Selecting previously unselected package libglapi-mesa:arm64. 613s Preparing to unpack .../059-libglapi-mesa_24.0.1-1ubuntu1_arm64.deb ... 613s Unpacking libglapi-mesa:arm64 (24.0.1-1ubuntu1) ... 613s Selecting previously unselected package libxcb-dri3-0:arm64. 613s Preparing to unpack .../060-libxcb-dri3-0_1.15-1_arm64.deb ... 613s Unpacking libxcb-dri3-0:arm64 (1.15-1) ... 613s Selecting previously unselected package libgl1-mesa-dri:arm64. 613s Preparing to unpack .../061-libgl1-mesa-dri_24.0.1-1ubuntu1_arm64.deb ... 613s Unpacking libgl1-mesa-dri:arm64 (24.0.1-1ubuntu1) ... 613s Selecting previously unselected package libglvnd0:arm64. 613s Preparing to unpack .../062-libglvnd0_1.7.0-1_arm64.deb ... 613s Unpacking libglvnd0:arm64 (1.7.0-1) ... 613s Selecting previously unselected package libx11-xcb1:arm64. 613s Preparing to unpack .../063-libx11-xcb1_2%3a1.8.7-1_arm64.deb ... 613s Unpacking libx11-xcb1:arm64 (2:1.8.7-1) ... 613s Selecting previously unselected package libxcb-dri2-0:arm64. 613s Preparing to unpack .../064-libxcb-dri2-0_1.15-1_arm64.deb ... 613s Unpacking libxcb-dri2-0:arm64 (1.15-1) ... 613s Selecting previously unselected package libxcb-glx0:arm64. 613s Preparing to unpack .../065-libxcb-glx0_1.15-1_arm64.deb ... 613s Unpacking libxcb-glx0:arm64 (1.15-1) ... 613s Selecting previously unselected package libxcb-present0:arm64. 613s Preparing to unpack .../066-libxcb-present0_1.15-1_arm64.deb ... 613s Unpacking libxcb-present0:arm64 (1.15-1) ... 613s Selecting previously unselected package libxcb-randr0:arm64. 613s Preparing to unpack .../067-libxcb-randr0_1.15-1_arm64.deb ... 613s Unpacking libxcb-randr0:arm64 (1.15-1) ... 613s Selecting previously unselected package libxcb-sync1:arm64. 613s Preparing to unpack .../068-libxcb-sync1_1.15-1_arm64.deb ... 613s Unpacking libxcb-sync1:arm64 (1.15-1) ... 613s Selecting previously unselected package libxcb-xfixes0:arm64. 613s Preparing to unpack .../069-libxcb-xfixes0_1.15-1_arm64.deb ... 613s Unpacking libxcb-xfixes0:arm64 (1.15-1) ... 613s Selecting previously unselected package libxfixes3:arm64. 613s Preparing to unpack .../070-libxfixes3_1%3a6.0.0-2_arm64.deb ... 613s Unpacking libxfixes3:arm64 (1:6.0.0-2) ... 613s Selecting previously unselected package libxshmfence1:arm64. 613s Preparing to unpack .../071-libxshmfence1_1.3-1build4_arm64.deb ... 613s Unpacking libxshmfence1:arm64 (1.3-1build4) ... 613s Selecting previously unselected package libxxf86vm1:arm64. 613s Preparing to unpack .../072-libxxf86vm1_1%3a1.1.4-1build3_arm64.deb ... 613s Unpacking libxxf86vm1:arm64 (1:1.1.4-1build3) ... 613s Selecting previously unselected package libglx-mesa0:arm64. 613s Preparing to unpack .../073-libglx-mesa0_24.0.1-1ubuntu1_arm64.deb ... 613s Unpacking libglx-mesa0:arm64 (24.0.1-1ubuntu1) ... 613s Selecting previously unselected package libglx0:arm64. 614s Preparing to unpack .../074-libglx0_1.7.0-1_arm64.deb ... 614s Unpacking libglx0:arm64 (1.7.0-1) ... 614s Selecting previously unselected package libgl1:arm64. 614s Preparing to unpack .../075-libgl1_1.7.0-1_arm64.deb ... 614s Unpacking libgl1:arm64 (1.7.0-1) ... 614s Selecting previously unselected package libgl2ps1.4. 614s Preparing to unpack .../076-libgl2ps1.4_1.4.2+dfsg1-2_arm64.deb ... 614s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2) ... 614s Selecting previously unselected package libglew2.2:arm64. 614s Preparing to unpack .../077-libglew2.2_2.2.0-4_arm64.deb ... 614s Unpacking libglew2.2:arm64 (2.2.0-4) ... 614s Selecting previously unselected package libsz2:arm64. 614s Preparing to unpack .../078-libsz2_1.1.2-1_arm64.deb ... 614s Unpacking libsz2:arm64 (1.1.2-1) ... 614s Selecting previously unselected package libhdf5-103-1:arm64. 614s Preparing to unpack .../079-libhdf5-103-1_1.10.10+repack-3ubuntu1_arm64.deb ... 614s Unpacking libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 614s Selecting previously unselected package libhdf5-hl-100:arm64. 614s Preparing to unpack .../080-libhdf5-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ... 614s Unpacking libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 614s Selecting previously unselected package libhwloc15:arm64. 614s Preparing to unpack .../081-libhwloc15_2.10.0-1_arm64.deb ... 614s Unpacking libhwloc15:arm64 (2.10.0-1) ... 614s Selecting previously unselected package libjpeg-turbo8:arm64. 614s Preparing to unpack .../082-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 614s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 614s Selecting previously unselected package libjpeg8:arm64. 614s Preparing to unpack .../083-libjpeg8_8c-2ubuntu11_arm64.deb ... 614s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 614s Selecting previously unselected package libjs-jquery. 614s Preparing to unpack .../084-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 614s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 614s Selecting previously unselected package libjs-jquery-ui. 614s Preparing to unpack .../085-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 614s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 614s Selecting previously unselected package libjsoncpp25:arm64. 614s Preparing to unpack .../086-libjsoncpp25_1.9.5-6_arm64.deb ... 614s Unpacking libjsoncpp25:arm64 (1.9.5-6) ... 614s Selecting previously unselected package libkim-api2:arm64. 614s Preparing to unpack .../087-libkim-api2_2.3.0-1_arm64.deb ... 614s Unpacking libkim-api2:arm64 (2.3.0-1) ... 614s Selecting previously unselected package liblapack3:arm64. 614s Preparing to unpack .../088-liblapack3_3.12.0-3_arm64.deb ... 614s Unpacking liblapack3:arm64 (3.12.0-3) ... 614s Selecting previously unselected package libnetcdf19:arm64. 614s Preparing to unpack .../089-libnetcdf19_1%3a4.9.2-3ubuntu1_arm64.deb ... 614s Unpacking libnetcdf19:arm64 (1:4.9.2-3ubuntu1) ... 614s Selecting previously unselected package libmunge2:arm64. 614s Preparing to unpack .../090-libmunge2_0.5.15-3ubuntu1_arm64.deb ... 614s Unpacking libmunge2:arm64 (0.5.15-3ubuntu1) ... 614s Selecting previously unselected package libpciaccess0:arm64. 614s Preparing to unpack .../091-libpciaccess0_0.17-3_arm64.deb ... 614s Unpacking libpciaccess0:arm64 (0.17-3) ... 614s Selecting previously unselected package libxnvctrl0:arm64. 614s Preparing to unpack .../092-libxnvctrl0_510.47.03-0ubuntu1_arm64.deb ... 614s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu1) ... 614s Selecting previously unselected package ocl-icd-libopencl1:arm64. 614s Preparing to unpack .../093-ocl-icd-libopencl1_2.3.2-1_arm64.deb ... 614s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1) ... 614s Selecting previously unselected package libhwloc-plugins:arm64. 614s Preparing to unpack .../094-libhwloc-plugins_2.10.0-1_arm64.deb ... 614s Unpacking libhwloc-plugins:arm64 (2.10.0-1) ... 614s Selecting previously unselected package libpmix2:arm64. 614s Preparing to unpack .../095-libpmix2_5.0.1-4_arm64.deb ... 614s Unpacking libpmix2:arm64 (5.0.1-4) ... 614s Selecting previously unselected package libucx0:arm64. 614s Preparing to unpack .../096-libucx0_1.16.0+ds-4_arm64.deb ... 614s Unpacking libucx0:arm64 (1.16.0+ds-4) ... 614s Selecting previously unselected package libopenmpi3:arm64. 615s Preparing to unpack .../097-libopenmpi3_4.1.6-5ubuntu1_arm64.deb ... 615s Unpacking libopenmpi3:arm64 (4.1.6-5ubuntu1) ... 615s Selecting previously unselected package libpnetcdf0d:arm64. 615s Preparing to unpack .../098-libpnetcdf0d_1.12.3-2_arm64.deb ... 615s Unpacking libpnetcdf0d:arm64 (1.12.3-2) ... 615s Selecting previously unselected package libpython3.12:arm64. 615s Preparing to unpack .../099-libpython3.12_3.12.2-1_arm64.deb ... 615s Unpacking libpython3.12:arm64 (3.12.2-1) ... 615s Selecting previously unselected package libvoro++1. 615s Preparing to unpack .../100-libvoro++1_0.5+revert-to-0.4.6+dfsg1-1_arm64.deb ... 615s Unpacking libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 615s Selecting previously unselected package libogg0:arm64. 615s Preparing to unpack .../101-libogg0_1.3.5-3_arm64.deb ... 615s Unpacking libogg0:arm64 (1.3.5-3) ... 615s Selecting previously unselected package libopengl0:arm64. 615s Preparing to unpack .../102-libopengl0_1.7.0-1_arm64.deb ... 615s Unpacking libopengl0:arm64 (1.7.0-1) ... 615s Selecting previously unselected package proj-data. 615s Preparing to unpack .../103-proj-data_9.3.1-1_all.deb ... 615s Unpacking proj-data (9.3.1-1) ... 616s Selecting previously unselected package libjbig0:arm64. 616s Preparing to unpack .../104-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 616s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 616s Selecting previously unselected package liblerc4:arm64. 616s Preparing to unpack .../105-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ... 616s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 616s Selecting previously unselected package libsharpyuv0:arm64. 616s Preparing to unpack .../106-libsharpyuv0_1.3.2-0.4_arm64.deb ... 616s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ... 616s Selecting previously unselected package libwebp7:arm64. 616s Preparing to unpack .../107-libwebp7_1.3.2-0.4_arm64.deb ... 616s Unpacking libwebp7:arm64 (1.3.2-0.4) ... 616s Selecting previously unselected package libtiff6:arm64. 616s Preparing to unpack .../108-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ... 616s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 616s Selecting previously unselected package libproj25:arm64. 616s Preparing to unpack .../109-libproj25_9.3.1-1_arm64.deb ... 616s Unpacking libproj25:arm64 (9.3.1-1) ... 616s Selecting previously unselected package libtbbmalloc2:arm64. 616s Preparing to unpack .../110-libtbbmalloc2_2021.11.0-2ubuntu2_arm64.deb ... 616s Unpacking libtbbmalloc2:arm64 (2021.11.0-2ubuntu2) ... 616s Selecting previously unselected package libtbbbind-2-5:arm64. 616s Preparing to unpack .../111-libtbbbind-2-5_2021.11.0-2ubuntu2_arm64.deb ... 616s Unpacking libtbbbind-2-5:arm64 (2021.11.0-2ubuntu2) ... 616s Selecting previously unselected package libtbb12:arm64. 616s Preparing to unpack .../112-libtbb12_2021.11.0-2ubuntu2_arm64.deb ... 616s Unpacking libtbb12:arm64 (2021.11.0-2ubuntu2) ... 616s Selecting previously unselected package libtcl8.6:arm64. 616s Preparing to unpack .../113-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 616s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 616s Selecting previously unselected package libtheora0:arm64. 616s Preparing to unpack .../114-libtheora0_1.1.1+dfsg.1-16.1_arm64.deb ... 616s Unpacking libtheora0:arm64 (1.1.1+dfsg.1-16.1) ... 616s Selecting previously unselected package libxft2:arm64. 616s Preparing to unpack .../115-libxft2_2.3.6-1_arm64.deb ... 616s Unpacking libxft2:arm64 (2.3.6-1) ... 616s Selecting previously unselected package x11-common. 616s Preparing to unpack .../116-x11-common_1%3a7.7+23ubuntu2_all.deb ... 616s Unpacking x11-common (1:7.7+23ubuntu2) ... 616s Selecting previously unselected package libxss1:arm64. 616s Preparing to unpack .../117-libxss1_1%3a1.2.3-1build2_arm64.deb ... 616s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 617s Selecting previously unselected package libtk8.6:arm64. 617s Preparing to unpack .../118-libtk8.6_8.6.13-2_arm64.deb ... 617s Unpacking libtk8.6:arm64 (8.6.13-2) ... 617s Selecting previously unselected package libvtk9.1:arm64. 617s Preparing to unpack .../119-libvtk9.1_9.1.0+really9.1.0+dfsg2-7build1_arm64.deb ... 617s Unpacking libvtk9.1:arm64 (9.1.0+really9.1.0+dfsg2-7build1) ... 617s Selecting previously unselected package liblammps0:arm64. 617s Preparing to unpack .../120-liblammps0_20240207+dfsg-1_arm64.deb ... 617s Unpacking liblammps0:arm64 (20240207+dfsg-1) ... 618s Selecting previously unselected package openmpi-common. 618s Preparing to unpack .../121-openmpi-common_4.1.6-5ubuntu1_all.deb ... 618s Unpacking openmpi-common (4.1.6-5ubuntu1) ... 618s Selecting previously unselected package libnl-3-dev:arm64. 618s Preparing to unpack .../122-libnl-3-dev_3.7.0-0.3_arm64.deb ... 618s Unpacking libnl-3-dev:arm64 (3.7.0-0.3) ... 618s Selecting previously unselected package libnl-route-3-dev:arm64. 618s Preparing to unpack .../123-libnl-route-3-dev_3.7.0-0.3_arm64.deb ... 618s Unpacking libnl-route-3-dev:arm64 (3.7.0-0.3) ... 618s Selecting previously unselected package libibverbs-dev:arm64. 618s Preparing to unpack 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... 618s Selecting previously unselected package libpmix-dev:arm64. 618s Preparing to unpack .../130-libpmix-dev_5.0.1-4_arm64.deb ... 618s Unpacking libpmix-dev:arm64 (5.0.1-4) ... 618s Selecting previously unselected package openmpi-bin. 618s Preparing to unpack .../131-openmpi-bin_4.1.6-5ubuntu1_arm64.deb ... 618s Unpacking openmpi-bin (4.1.6-5ubuntu1) ... 618s Selecting previously unselected package libopenmpi-dev:arm64. 618s Preparing to unpack .../132-libopenmpi-dev_4.1.6-5ubuntu1_arm64.deb ... 618s Unpacking libopenmpi-dev:arm64 (4.1.6-5ubuntu1) ... 618s Selecting previously unselected package mpi-default-dev. 618s Preparing to unpack .../133-mpi-default-dev_1.15_arm64.deb ... 618s Unpacking mpi-default-dev (1.15) ... 618s Selecting previously unselected package liblammps-dev. 618s Preparing to unpack .../134-liblammps-dev_20240207+dfsg-1_arm64.deb ... 618s Unpacking liblammps-dev (20240207+dfsg-1) ... 618s Selecting previously unselected package mpi-default-bin. 618s Preparing to unpack .../135-mpi-default-bin_1.15_arm64.deb ... 618s Unpacking mpi-default-bin (1.15) ... 618s Selecting previously unselected package python3-lammps. 618s Preparing to unpack .../136-python3-lammps_20240207+dfsg-1_arm64.deb ... 618s Unpacking python3-lammps (20240207+dfsg-1) ... 619s Selecting previously unselected package autopkgtest-satdep. 619s Preparing to unpack .../137-7-autopkgtest-satdep.deb ... 619s Unpacking autopkgtest-satdep (0) ... 619s Setting up libxcb-dri3-0:arm64 (1.15-1) ... 619s Setting up libtbbmalloc2:arm64 (2021.11.0-2ubuntu2) ... 619s Setting up libpixman-1-0:arm64 (0.42.2-1) ... 619s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ... 619s Setting up libx11-xcb1:arm64 (2:1.8.7-1) ... 619s Setting up libpciaccess0:arm64 (0.17-3) ... 619s Setting up libdouble-conversion3:arm64 (3.3.0-1) ... 619s Setting up libevent-extra-2.1-7:arm64 (2.1.12-stable-9) ... 619s Setting up libdrm-nouveau2:arm64 (2.4.120-2) ... 619s Setting up libxcb-xfixes0:arm64 (1.15-1) ... 619s Setting up libogg0:arm64 (1.3.5-3) ... 619s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ... 619s Setting up proj-data (9.3.1-1) ... 619s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 619s Setting up libxcb-render0:arm64 (1.15-1) ... 619s Setting up libdrm-radeon1:arm64 (2.4.120-2) ... 619s Setting up libglvnd0:arm64 (1.7.0-1) ... 619s Setting up libxcb-glx0:arm64 (1.15-1) ... 619s Setting up x11-common (1:7.7+23ubuntu2) ... 619s Setting up libdeflate0:arm64 (1.19-1) ... 619s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ... 619s Setting up libevent-openssl-2.1-7:arm64 (2.1.12-stable-9) ... 619s Setting up m4 (1.4.19-4) ... 619s Setting up libxcb-shm0:arm64 (1.15-1) ... 619s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ... 619s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 619s Setting up libaec0:arm64 (1.1.2-1) ... 619s Setting up libopengl0:arm64 (1.7.0-1) ... 619s Setting up libxxf86vm1:arm64 (1:1.1.4-1build3) ... 619s Setting up gcc-12-base:arm64 (12.3.0-15ubuntu1) ... 619s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu1) ... 619s Setting up libxcb-present0:arm64 (1.15-1) ... 619s Setting up autotools-dev (20220109.1) ... 619s Setting up libblas3:arm64 (3.12.0-3) ... 619s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 619s Setting up libtirpc-dev:arm64 (1.3.4+ds-1build1) ... 619s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 619s Setting up libmunge2:arm64 (0.5.15-3ubuntu1) ... 619s Setting up libxfixes3:arm64 (1:6.0.0-2) ... 619s Setting up libxcb-sync1:arm64 (1.15-1) ... 619s Setting up fonts-dejavu-mono (2.37-8) ... 619s Setting up libhwloc15:arm64 (2.10.0-1) ... 619s Setting up libmpc3:arm64 (1.3.1-1) ... 619s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ... 619s Setting up libevent-2.1-7:arm64 (2.1.12-stable-9) ... 619s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ... 619s Setting up libjsoncpp25:arm64 (1.9.5-6) ... 619s Setting up fonts-dejavu-core (2.37-8) ... 619s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 619s Setting up libltdl7:arm64 (2.4.7-7) ... 619s Setting up libfftw3-double3:arm64 (3.3.10-1ubuntu1) ... 619s Setting up libglapi-mesa:arm64 (24.0.1-1ubuntu1) ... 619s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ... 619s Setting up libvulkan1:arm64 (1.3.275.0-1) ... 619s Setting up autoconf (2.71-3) ... 619s Setting up libwebp7:arm64 (1.3.2-0.4) ... 619s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ... 619s Setting up libxcb-dri2-0:arm64 (1.15-1) ... 619s Setting up libnl-3-dev:arm64 (3.7.0-0.3) ... 619s Setting up libnsl-dev:arm64 (1.3.0-3) ... 619s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1) ... 619s Setting up libxshmfence1:arm64 (1.3-1build4) ... 619s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ... 619s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... 619s Setting up libxcb-randr0:arm64 (1.15-1) ... 619s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ... 619s Setting up openmpi-common (4.1.6-5ubuntu1) ... 619s Setting up librdmacm1t64:arm64 (50.0-2) ... 619s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 619s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ... 619s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 619s Setting up libisl23:arm64 (0.26-3) ... 619s Setting up libc-dev-bin (2.39-0ubuntu2) ... 619s Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 619s Setting up libllvm17:arm64 (1:17.0.6-5build1) ... 619s Setting up libpython3.12:arm64 (3.12.2-1) ... 619s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ... 619s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ... 619s Setting up libsz2:arm64 (1.1.2-1) ... 619s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ... 619s Setting up libevent-pthreads-2.1-7:arm64 (2.1.12-stable-9) ... 619s Setting up libdrm-amdgpu1:arm64 (2.4.120-2) ... 619s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 619s Setting up automake (1:1.16.5-1.3ubuntu1) ... 619s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 619s Setting up libfabric1:arm64 (1.17.0-3) ... 619s Setting up liblapack3:arm64 (3.12.0-3) ... 619s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 619s Setting up cpp-12 (12.3.0-15ubuntu1) ... 619s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 620s Setting up libgl1-mesa-dri:arm64 (24.0.1-1ubuntu1) ... 620s Setting up libhwloc-plugins:arm64 (2.10.0-1) ... 620s Setting up libtbbbind-2-5:arm64 (2021.11.0-2ubuntu2) ... 620s Setting up libnl-route-3-dev:arm64 (3.7.0-0.3) ... 620s Setting up libltdl-dev:arm64 (2.4.7-7) ... 620s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 620s Setting up libgcc-12-dev:arm64 (12.3.0-15ubuntu1) ... 620s Setting up libevent-dev (2.1.12-stable-9) ... 620s Setting up libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ... 620s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ... 620s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ... 620s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3) ... 620s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ... 620s Setting up libhsakmt1:arm64 (5.7.0-1) ... 620s Setting up libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ... 620s Setting up libxft2:arm64 (2.3.6-1) ... 620s Setting up libglx-mesa0:arm64 (24.0.1-1ubuntu1) ... 620s Setting up libglx0:arm64 (1.7.0-1) ... 620s Setting up libproj25:arm64 (9.3.1-1) ... 620s Setting up libpmix2:arm64 (5.0.1-4) ... 620s Setting up libtk8.6:arm64 (8.6.13-2) ... 620s Setting up libgfortran-12-dev:arm64 (12.3.0-15ubuntu1) ... 620s Setting up libtbb12:arm64 (2021.11.0-2ubuntu2) ... 620s Setting up libibverbs-dev:arm64 (50.0-2) ... 620s Setting up libcairo2:arm64 (1.18.0-1) ... 620s Setting up libnuma-dev:arm64 (2.0.18-1) ... 620s Setting up libgl1:arm64 (1.7.0-1) ... 620s Setting up gcc-12 (12.3.0-15ubuntu1) ... 620s Setting up libglew2.2:arm64 (2.2.0-4) ... 620s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3ubuntu1) ... 620s Setting up libnetcdf19:arm64 (1:4.9.2-3ubuntu1) ... 620s Setting up libhsa-runtime64-1 (5.7.1-1) ... 620s Setting up libtheora0:arm64 (1.1.1+dfsg.1-16.1) ... 620s Setting up libhwloc-dev:arm64 (2.10.0-1) ... 620s Setting up libpmix-dev:arm64 (5.0.1-4) ... 620s Setting up libgl2ps1.4 (1.4.2+dfsg1-2) ... 620s Setting up gfortran-12 (12.3.0-15ubuntu1) ... 620s Setting up libamdhip64-5 (5.2.3-12) ... 620s Setting up libucx0:arm64 (1.16.0+ds-4) ... 620s Setting up libopenmpi3:arm64 (4.1.6-5ubuntu1) ... 620s Setting up libkim-api2:arm64 (2.3.0-1) ... 620s Setting up libvtk9.1:arm64 (9.1.0+really9.1.0+dfsg2-7build1) ... 620s Setting up libpnetcdf0d:arm64 (1.12.3-2) ... 620s Setting up openmpi-bin (4.1.6-5ubuntu1) ... 620s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 620s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 620s Setting up mpi-default-bin (1.15) ... 620s Setting up liblammps0:arm64 (20240207+dfsg-1) ... 620s Setting up libopenmpi-dev:arm64 (4.1.6-5ubuntu1) ... 620s update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode 620s Setting up mpi-default-dev (1.15) ... 620s Setting up liblammps-dev (20240207+dfsg-1) ... 620s Setting up python3-lammps (20240207+dfsg-1) ... 620s Setting up autopkgtest-satdep (0) ... 620s Processing triggers for man-db (2.12.0-3) ... 620s Processing triggers for install-info (7.1-3) ... 620s Processing triggers for libc-bin (2.39-0ubuntu2) ... 629s (Reading database ... 82096 files and directories currently installed.) 629s Removing autopkgtest-satdep (0) ... 683s autopkgtest [11:40:08]: test command1: cd python/examples; python3 demo.py 683s autopkgtest [11:40:08]: test command1: [----------------------- 686s LAMMPS (7 Feb 2024 - Update 1) 686s 686s Python output: 686s Natoms, mass, x[0][0] coord = 4000 1.0 16.651271530416228 686s Temperature from compute = 0.7683848148006238 686s Energy from equal-style variable = -5.774392400140566 686s Velocity component from atom-style variable = -0.1669643026996425 686s Volume from get_thermo = 4738.213693437576 686s Natoms from get_natoms = 4000 686s Global coords from gather_atoms = 16.651271530416228 16.790010773016775 0.19047524160174037 686s Changed x[0][0] via scatter_atoms = 17.651271530416228 686s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 686s using 1 OpenMP thread(s) per MPI task 686s Lattice spacing in x,y,z = 1.6795962 1.6795962 1.6795962 686s Created orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 686s 1 by 1 by 1 MPI processor grid 686s Created 4000 atoms 686s using lattice units in orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 686s create_atoms CPU = 0.001 seconds 686s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 686s Neighbor list info ... 686s update: every = 20 steps, delay = 0 steps, check = no 686s max neighbors/atom: 2000, page size: 100000 686s master list distance cutoff = 2.8 686s ghost atom cutoff = 2.8 686s binsize = 1.4, bins = 12 12 12 686s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 686s (1) pair lj/cut, perpetual 686s attributes: half, newton on 686s pair build: half/bin/atomonly/newton 686s stencil: half/bin/3d 686s bin: standard 686s Setting up Verlet run ... 686s Unit style : lj 686s Current step : 0 686s Time step : 0.005 686s Per MPI rank memory allocation (min/avg/max) = 3.763 | 3.763 | 3.763 Mbytes 686s Step Temp E_pair E_mol TotEng Press 686s 0 1.44 -6.7733681 0 -4.6139081 -5.0199732 686s 100 0.76838481 -5.7743924 0 -4.6221033 0.13682061 686s Loop time of 0.228399 on 1 procs for 100 steps with 4000 atoms 686s 686s Performance: 189142.516 tau/day, 437.830 timesteps/s, 1.751 Matom-step/s 686s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads 686s 686s MPI task timing breakdown: 686s Section | min time | avg time | max time |%varavg| %total 686s --------------------------------------------------------------- 686s Pair | 0.19262 | 0.19262 | 0.19262 | 0.0 | 84.33 686s Neigh | 0.026622 | 0.026622 | 0.026622 | 0.0 | 11.66 686s Comm | 0.004403 | 0.004403 | 0.004403 | 0.0 | 1.93 686s Output | 0.00012679 | 0.00012679 | 0.00012679 | 0.0 | 0.06 686s Modify | 0.0038605 | 0.0038605 | 0.0038605 | 0.0 | 1.69 686s Other | | 0.0007685 | | | 0.34 686s 686s Nlocal: 4000 ave 4000 max 4000 min 686s Histogram: 1 0 0 0 0 0 0 0 0 0 686s Nghost: 5758 ave 5758 max 5758 min 686s Histogram: 1 0 0 0 0 0 0 0 0 0 686s Neighs: 150488 ave 150488 max 150488 min 686s Histogram: 1 0 0 0 0 0 0 0 0 0 686s 686s Total # of neighbors = 150488 686s Ave neighs/atom = 37.622 686s Neighbor list builds = 5 686s Dangerous builds not checked 686s Total wall time: 0:00:00 687s autopkgtest [11:40:12]: test command1: -----------------------] 688s command1 PASS 688s autopkgtest [11:40:13]: test command1: - - - - - - - - - - results - - - - - - - - - - 689s autopkgtest [11:40:14]: @@@@@@@@@@@@@@@@@@@@ summary 689s crack PASS 689s dipole PASS 689s ellipse PASS 689s flow PASS 689s friction PASS 689s hugo PASS 689s command1 PASS 709s Creating nova instance adt-noble-arm64-lammps-20240319-112845-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240319.img (UUID 821fd622-e452-4ae8-b5c8-959e73b1612a)... 709s Creating nova instance adt-noble-arm64-lammps-20240319-112845-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240319.img (UUID 821fd622-e452-4ae8-b5c8-959e73b1612a)...