0s autopkgtest [08:54:30]: starting date: 2024-03-11
  0s autopkgtest [08:54:30]: git checkout: d9c0295 adt_testbed.py: supress warnings from apt using a shell pipeline
  0s autopkgtest [08:54:30]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.m0as3k2g/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:sqlite3,src:readline --apt-upgrade gbrowse --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=sqlite3/3.45.1-1ubuntu1 readline/8.2-3.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-9.secgroup --name adt-noble-arm64-gbrowse-20240311-085430-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 73s autopkgtest [08:55:43]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 73s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
 73s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [37.3 kB]
 74s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [3976 B]
 74s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [2622 kB]
 74s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [434 kB]
 74s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [581 kB]
 74s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
 74s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [20.3 kB]
 74s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
 74s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [2971 kB]
 74s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
 74s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [39.6 kB]
 74s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
 76s Fetched 6838 kB in 2s (3288 kB/s)
 76s Reading package lists...
 78s Reading package lists...
 78s Building dependency tree...
 78s Reading state information...
 79s Calculating upgrade...
 79s The following packages will be upgraded:
 79s   libsqlite3-0 readline-common
 79s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 79s Need to get 760 kB of archives.
 79s After this operation, 0 B of additional disk space will be used.
 79s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libsqlite3-0 arm64 3.45.1-1ubuntu1 [704 kB]
 80s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB]
 80s Fetched 760 kB in 1s (1325 kB/s)
 81s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74748 files and directories currently installed.)
 81s Preparing to unpack .../libsqlite3-0_3.45.1-1ubuntu1_arm64.deb ...
 81s Unpacking libsqlite3-0:arm64 (3.45.1-1ubuntu1) over (3.45.1-1) ...
 81s Preparing to unpack .../readline-common_8.2-3.1_all.deb ...
 81s Unpacking readline-common (8.2-3.1) over (8.2-3) ...
 81s Setting up libsqlite3-0:arm64 (3.45.1-1ubuntu1) ...
 81s Setting up readline-common (8.2-3.1) ...
 81s Processing triggers for man-db (2.12.0-3) ...
 81s Processing triggers for install-info (7.1-3) ...
 81s Processing triggers for libc-bin (2.39-0ubuntu2) ...
 81s Reading package lists...
 82s Building dependency tree...
 82s Reading state information...
 82s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 83s sh: Attempting to set up Debian/Ubuntu apt sources automatically
 83s sh: Distribution appears to be Ubuntu
 84s Reading package lists...
 84s Building dependency tree...
 84s Reading state information...
 85s eatmydata is already the newest version (131-1).
 85s dbus is already the newest version (1.14.10-4ubuntu1).
 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 85s Reading package lists...
 85s Building dependency tree...
 85s Reading state information...
 85s rng-tools-debian is already the newest version (2.4).
 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 85s Reading package lists...
 86s Building dependency tree...
 86s Reading state information...
 86s haveged is already the newest version (1.9.14-1ubuntu1).
 86s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 86s Reading package lists...
 87s Building dependency tree...
 87s Reading state information...
 87s The following packages will be REMOVED:
 87s   cloud-init* python3-configobj* python3-debconf*
 87s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
 87s After this operation, 3248 kB disk space will be freed.
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74748 files and directories currently installed.)
 88s Removing cloud-init (24.1-0ubuntu1) ...
 88s Removing python3-configobj (5.0.8-3) ...
 88s Removing python3-debconf (1.5.86) ...
 88s Processing triggers for man-db (2.12.0-3) ...
 89s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74359 files and directories currently installed.)
 89s Purging configuration files for cloud-init (24.1-0ubuntu1) ...
 89s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
 89s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
 90s Reading package lists...
 90s Building dependency tree...
 90s Reading state information...
 90s linux-generic is already the newest version (6.8.0-11.11+1).
 90s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 91s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
 91s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
 91s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
 91s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
 92s Reading package lists...
 92s Reading package lists...
 92s Building dependency tree...
 92s Reading state information...
 93s Calculating upgrade...
 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 93s Reading package lists...
 93s Building dependency tree...
 93s Reading state information...
 94s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 94s autopkgtest [08:56:04]: rebooting testbed after setup commands that affected boot
296s autopkgtest [08:59:26]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024
296s autopkgtest [08:59:26]: testbed dpkg architecture: arm64
297s autopkgtest [08:59:27]: @@@@@@@@@@@@@@@@@@@@ apt-source gbrowse
300s Get:1 http://ftpmaster.internal/ubuntu noble/universe gbrowse 2.56+dfsg-12build1 (dsc) [2673 B]
300s Get:2 http://ftpmaster.internal/ubuntu noble/universe gbrowse 2.56+dfsg-12build1 (tar) [4356 kB]
300s Get:3 http://ftpmaster.internal/ubuntu noble/universe gbrowse 2.56+dfsg-12build1 (diff) [24.7 kB]
300s gpgv: Signature made Thu Jan 11 02:59:16 2024 UTC
300s gpgv:                using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37
300s gpgv: Can't check signature: No public key
300s dpkg-source: warning: cannot verify inline signature for ./gbrowse_2.56+dfsg-12build1.dsc: no acceptable signature found
300s autopkgtest [08:59:30]: testing package gbrowse version 2.56+dfsg-12build1
300s autopkgtest [08:59:30]: build not needed
301s autopkgtest [08:59:31]: test autodep8-perl-build-deps: preparing testbed
304s Reading package lists...
304s Building dependency tree...
304s Reading state information...
304s Correcting dependencies...Starting pkgProblemResolver with broken count: 0
304s Starting 2 pkgProblemResolver with broken count: 0
304s Done
304s  Done
305s Starting pkgProblemResolver with broken count: 0
305s Starting 2 pkgProblemResolver with broken count: 0
305s Done
305s The following additional packages will be installed:
305s   apache2 apache2-bin apache2-data apache2-dev apache2-utils autoconf autodep8
305s   automake autopoint autotools-dev bioperl build-essential cpp cpp-13
305s   cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu dctrl-tools debhelper
305s   debugedit dh-autoreconf dh-exec dh-strip-nondeterminism dwz
305s   fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++ g++-13
305s   g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gbrowse gbrowse-calign
305s   gbrowse-data gcc gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu
305s   gettext intltool-debian libalgorithm-diff-perl libanyevent-cachedns-perl
305s   libanyevent-http-perl libanyevent-perl libapache-dbi-perl
305s   libapache2-mod-perl2 libapr1 libapr1-dev libaprutil1 libaprutil1-dbd-sqlite3
305s   libaprutil1-dev libaprutil1-ldap libarchive-zip-perl libasan8 libatomic1
305s   libbio-coordinate-perl libbio-db-biofetch-perl libbio-db-gff-perl
305s   libbio-db-seqfeature-perl libbio-graphics-perl libbio-perl-perl libc-dev-bin
305s   libc6-dev libcapture-tiny-perl libcc1-0 libcgi-pm-perl libcgi-session-perl
305s   libclass-data-inheritable-perl libclone-perl libcommon-sense-perl
305s   libcrypt-dev libdata-stag-perl libdbd-pg-perl libdbd-sqlite3-perl
305s   libdbi-perl libdebhelper-perl libdeflate0 libdevel-stacktrace-perl
305s   libdevel-symdump-perl libdw1 libencode-locale-perl libexception-class-perl
305s   libexpat1-dev libexporter-tiny-perl libfile-listing-perl
305s   libfile-stripnondeterminism-perl libfontconfig1 libgcc-13-dev libgd-perl
305s   libgd3 libgomp1 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
305s   libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl
305s   libhttp-message-perl libhttp-negotiate-perl libhwasan0 libio-html-perl
305s   libio-socket-ssl-perl libio-string-perl libisl23 libitm1 libjbig0
305s   libjpeg-turbo8 libjpeg8 libjs-prototype libjs-scriptaculous libjson-perl
305s   libldap-dev libldap2-dev liblerc4 liblist-moreutils-perl
305s   liblist-moreutils-xs-perl liblsan0 liblua5.4-0 liblwp-mediatypes-perl
305s   liblwp-protocol-https-perl libmodule-build-perl libmpc3 libnet-http-perl
305s   libnet-ssleay-perl libnsl-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev
305s   libpcre2-posix3 libpq5 libreadline8t64 libsctp-dev libsctp1 libsharpyuv0
305s   libstatistics-descriptive-perl libstdc++-13-dev libstring-approx-perl
305s   libsub-override-perl libsub-uplevel-perl libterm-readkey-perl
305s   libtest-deep-perl libtest-differences-perl libtest-exception-perl
305s   libtest-most-perl libtest-warn-perl libtext-diff-perl libtiff6
305s   libtimedate-perl libtirpc-dev libtool libtry-tiny-perl libtsan2 libubsan1
305s   liburi-perl libvm-ec2-perl libwebp7 libwww-perl libwww-robotrules-perl
305s   libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl
305s   libxml-sax-perl libxml-simple-perl libxpm4 linux-libc-dev m4
305s   perl-openssl-defaults pkg-perl-autopkgtest po-debconf rename rpcsvc-proto
305s   sqlite3 uuid-dev
305s Suggested packages:
305s   apache2-doc apache2-suexec-pristine | apache2-suexec-custom www-browser
305s   autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-13-locales
305s   cpp-13-doc debtags dh-make gcc-13-doc libfile-nfslock-perl gcc-multilib
305s   manpages-dev flex bison gdb gcc-doc gdb-aarch64-linux-gnu gettext-doc
305s   libasprintf-dev libgettextpo-dev libev-perl libevent-perl libio-async-perl
305s   libpoe-perl libtask-weaken-perl libxml-sax-expatxs-perl glibc-doc
305s   libmldbm-perl libnet-daemon-perl libsql-statement-perl libgd-tools
305s   libdata-dump-perl libio-compress-brotli-perl libcrypt-ssleay-perl
305s   lksctp-tools libstdc++-13-doc libtool-doc gfortran | fortran95-compiler
305s   gcj-jdk libsub-name-perl libbusiness-isbn-perl libregexp-ipv6-perl
305s   libauthen-ntlm-perl m4-doc libmail-box-perl sqlite3-doc
305s Recommended packages:
305s   ssl-cert bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl
305s   libyaml-perl libace-perl libxml-twig-perl libset-scalar-perl
305s   libalgorithm-diff-xs-perl libasync-interrupt-perl libev-perl | libevent-perl
305s   libguard-perl libapache2-reload-perl libbsd-resource-perl libbio-scf-perl
305s   libberkeleydb-perl libgd-svg-perl bioperl-run | libbio-perl-run-perl
305s   libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl
305s   libconvert-binary-c-perl libdbd-mysql-perl libgraph-perl libgraphviz-perl
305s   libhtml-tableextract-perl libpostscript-perl libsoap-lite-perl
305s   libsort-naturally-perl libspreadsheet-parseexcel-perl
305s   libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl
305s   libxml-dom-xpath-perl libxml-parser-perl libxml-sax-writer-perl
305s   libxml-writer-perl manpages manpages-dev libc-devtools libcgi-fast-perl
305s   libfreezethaw-perl perl-tk libxml-libxslt-perl libmldbm-perl libxml-perl
305s   libarchive-cpio-perl libhtml-format-perl javascript-common libjson-xs-perl
305s   libmodule-signature-perl libpod-readme-perl libsoftware-license-perl
305s   libltdl-dev libdata-dump-perl libhtml-form-perl libmailtools-perl
305s   libxml-sax-expat-perl libmail-sendmail-perl
306s The following packages will be REMOVED:
306s   libreadline8
306s The following NEW packages will be installed:
306s   apache2 apache2-bin apache2-data apache2-dev apache2-utils autoconf autodep8
306s   automake autopoint autotools-dev bioperl build-essential cpp cpp-13
306s   cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu dctrl-tools debhelper
306s   debugedit dh-autoreconf dh-exec dh-strip-nondeterminism dwz
306s   fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++ g++-13
306s   g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gbrowse gbrowse-calign
306s   gbrowse-data gcc gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu
306s   gettext intltool-debian libalgorithm-diff-perl libanyevent-cachedns-perl
306s   libanyevent-http-perl libanyevent-perl libapache-dbi-perl
306s   libapache2-mod-perl2 libapr1 libapr1-dev libaprutil1 libaprutil1-dbd-sqlite3
306s   libaprutil1-dev libaprutil1-ldap libarchive-zip-perl libasan8 libatomic1
306s   libbio-coordinate-perl libbio-db-biofetch-perl libbio-db-gff-perl
306s   libbio-db-seqfeature-perl libbio-graphics-perl libbio-perl-perl libc-dev-bin
306s   libc6-dev libcapture-tiny-perl libcc1-0 libcgi-pm-perl libcgi-session-perl
306s   libclass-data-inheritable-perl libclone-perl libcommon-sense-perl
306s   libcrypt-dev libdata-stag-perl libdbd-pg-perl libdbd-sqlite3-perl
306s   libdbi-perl libdebhelper-perl libdeflate0 libdevel-stacktrace-perl
306s   libdevel-symdump-perl libdw1 libencode-locale-perl libexception-class-perl
306s   libexpat1-dev libexporter-tiny-perl libfile-listing-perl
306s   libfile-stripnondeterminism-perl libfontconfig1 libgcc-13-dev libgd-perl
306s   libgd3 libgomp1 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
306s   libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl
306s   libhttp-message-perl libhttp-negotiate-perl libhwasan0 libio-html-perl
306s   libio-socket-ssl-perl libio-string-perl libisl23 libitm1 libjbig0
306s   libjpeg-turbo8 libjpeg8 libjs-prototype libjs-scriptaculous libjson-perl
306s   libldap-dev libldap2-dev liblerc4 liblist-moreutils-perl
306s   liblist-moreutils-xs-perl liblsan0 liblua5.4-0 liblwp-mediatypes-perl
306s   liblwp-protocol-https-perl libmodule-build-perl libmpc3 libnet-http-perl
306s   libnet-ssleay-perl libnsl-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev
306s   libpcre2-posix3 libpq5 libreadline8t64 libsctp-dev libsctp1 libsharpyuv0
306s   libstatistics-descriptive-perl libstdc++-13-dev libstring-approx-perl
306s   libsub-override-perl libsub-uplevel-perl libterm-readkey-perl
306s   libtest-deep-perl libtest-differences-perl libtest-exception-perl
306s   libtest-most-perl libtest-warn-perl libtext-diff-perl libtiff6
306s   libtimedate-perl libtirpc-dev libtool libtry-tiny-perl libtsan2 libubsan1
306s   liburi-perl libvm-ec2-perl libwebp7 libwww-perl libwww-robotrules-perl
306s   libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl
306s   libxml-sax-perl libxml-simple-perl libxpm4 linux-libc-dev m4
306s   perl-openssl-defaults pkg-perl-autopkgtest po-debconf rename rpcsvc-proto
306s   sqlite3 uuid-dev
306s 0 upgraded, 172 newly installed, 1 to remove and 0 not upgraded.
306s 1 not fully installed or removed.
306s Need to get 88.1 MB of archives.
306s After this operation, 327 MB of additional disk space will be used.
306s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 libapr1 arm64 1.7.2-3 [103 kB]
306s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1 arm64 1.6.3-1ubuntu1 [91.7 kB]
306s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1-dbd-sqlite3 arm64 1.6.3-1ubuntu1 [11.0 kB]
306s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1-ldap arm64 1.6.3-1ubuntu1 [8972 B]
306s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB]
306s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-bin arm64 2.4.58-1ubuntu2 [1316 kB]
306s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-data all 2.4.58-1ubuntu2 [163 kB]
306s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-utils arm64 2.4.58-1ubuntu2 [94.9 kB]
306s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 apache2 arm64 2.4.58-1ubuntu2 [90.2 kB]
306s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB]
306s Get:11 http://ftpmaster.internal/ubuntu noble/universe arm64 libdata-stag-perl all 0.14-3 [372 kB]
306s Get:12 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-perl-perl all 1.7.8-1 [2580 kB]
306s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libclass-data-inheritable-perl all 0.08-3 [8084 B]
306s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libdevel-stacktrace-perl all 2.0500-1 [22.1 kB]
306s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libexception-class-perl all 1.45-1 [28.6 kB]
306s Get:16 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-deep-perl all 1.204-1 [47.1 kB]
306s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libcapture-tiny-perl all 0.48-2 [20.2 kB]
306s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libalgorithm-diff-perl all 1.201-1 [41.8 kB]
306s Get:19 http://ftpmaster.internal/ubuntu noble/universe arm64 libtext-diff-perl all 1.45-2 [25.6 kB]
306s Get:20 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-differences-perl all 0.71-1 [15.8 kB]
306s Get:21 http://ftpmaster.internal/ubuntu noble/universe arm64 libsub-uplevel-perl all 0.2800-3 [11.6 kB]
307s Get:22 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-exception-perl all 0.43-3 [13.4 kB]
307s Get:23 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-warn-perl all 0.37-2 [12.6 kB]
307s Get:24 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-most-perl all 0.38-1 [21.5 kB]
307s Get:25 http://ftpmaster.internal/ubuntu noble/universe arm64 bioperl all 1.7.8-1 [216 kB]
307s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
307s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
307s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB]
307s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB]
307s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB]
307s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
307s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB]
307s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB]
307s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB]
307s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB]
307s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB]
307s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB]
307s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB]
307s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libgd3 arm64 2.3.3-9ubuntu1 [119 kB]
307s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libgd-perl arm64 2.78-1build1 [125 kB]
307s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libdevel-symdump-perl all 2.18-5 [12.6 kB]
307s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 liburi-perl all 5.27-1 [88.0 kB]
307s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libencode-locale-perl all 1.05-3 [11.6 kB]
307s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libtimedate-perl all 2.3300-2 [34.0 kB]
307s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-date-perl all 6.06-1 [10.2 kB]
307s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libfile-listing-perl all 6.16-1 [11.3 kB]
307s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-tagset-perl all 3.20-6 [11.3 kB]
307s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-parser-perl arm64 3.81-1build1 [84.8 kB]
307s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-tree-perl all 5.07-3 [200 kB]
307s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libclone-perl arm64 0.46-1build1 [10.4 kB]
307s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libio-html-perl all 1.004-3 [15.9 kB]
307s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.1 kB]
307s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-message-perl all 6.45-1ubuntu1 [78.2 kB]
307s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-cookies-perl all 6.11-1 [18.2 kB]
307s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-negotiate-perl all 6.01-2 [12.4 kB]
307s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 perl-openssl-defaults arm64 7 [7536 B]
307s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libnet-ssleay-perl arm64 1.94-1 [311 kB]
307s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libio-socket-ssl-perl all 2.085-1 [195 kB]
307s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libnet-http-perl all 6.23-1 [22.3 kB]
307s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 liblwp-protocol-https-perl all 6.13-1 [9006 B]
307s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libtry-tiny-perl all 0.31-2 [20.8 kB]
307s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libwww-robotrules-perl all 6.02-1 [12.6 kB]
307s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libwww-perl all 6.76-1 [138 kB]
307s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libapache2-mod-perl2 arm64 2.0.13-1build1 [777 kB]
307s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libdbi-perl arm64 1.643-4build1 [718 kB]
307s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 libapache-dbi-perl all 1.12-3 [40.5 kB]
307s Get:67 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-db-biofetch-perl all 1.7.3-4 [17.1 kB]
307s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libcgi-pm-perl all 4.61-1 [185 kB]
307s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-db-gff-perl all 1.7.4-1 [273 kB]
307s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libpq5 arm64 16.2-1 [136 kB]
307s Get:71 http://ftpmaster.internal/ubuntu noble/universe arm64 libdbd-pg-perl arm64 3.18.0-1build1 [191 kB]
307s Get:72 http://ftpmaster.internal/ubuntu noble/universe arm64 libdbd-sqlite3-perl arm64 1.74-1build1 [159 kB]
307s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-db-seqfeature-perl all 1.7.4-2 [169 kB]
307s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-graphics-perl all 2.40-6 [601 kB]
307s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-coordinate-perl all 1.7.1-4 [56.4 kB]
307s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 libcgi-session-perl all 4.48-4 [108 kB]
307s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libjson-perl all 4.10000-1 [81.9 kB]
307s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libexporter-tiny-perl all 1.006002-1 [36.8 kB]
307s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 liblist-moreutils-xs-perl arm64 0.430-3build3 [40.9 kB]
307s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 liblist-moreutils-perl all 0.430-2 [38.2 kB]
307s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libstatistics-descriptive-perl all 3.0801-1 [58.7 kB]
307s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-daemon-perl all 6.16-1 [22.4 kB]
307s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libterm-readkey-perl arm64 2.38-2build2 [23.1 kB]
307s Get:84 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB]
307s Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 sqlite3 arm64 3.45.1-1ubuntu1 [140 kB]
307s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prototype all 1.7.3-1 [44.8 kB]
307s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-scriptaculous all 1.9.0-3 [92.6 kB]
307s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libanyevent-perl arm64 7.170-2build4 [368 kB]
307s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libanyevent-cachedns-perl all 0.08-3 [7216 B]
307s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libcommon-sense-perl arm64 3.75-3build1 [20.3 kB]
307s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libanyevent-http-perl all 2.25-2 [30.3 kB]
307s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libstring-approx-perl arm64 3.28-2build2 [34.7 kB]
307s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-namespacesupport-perl all 1.12-2 [13.5 kB]
307s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-sax-base-perl all 1.09-3 [18.9 kB]
307s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-sax-perl all 1.02+dfsg-3 [57.0 kB]
307s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1build2 [296 kB]
308s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-simple-perl all 2.25-2 [64.1 kB]
308s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libvm-ec2-perl all 1.28-4 [766 kB]
308s Get:99 http://ftpmaster.internal/ubuntu noble/universe arm64 gbrowse all 2.56+dfsg-12build1 [2181 kB]
308s Get:100 http://ftpmaster.internal/ubuntu noble/universe arm64 gbrowse-data all 2.56+dfsg-12build1 [1226 kB]
308s Get:101 http://ftpmaster.internal/ubuntu noble/universe arm64 gbrowse-calign arm64 2.56+dfsg-12build1 [14.7 kB]
308s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 autotools-dev all 20220109.1 [44.9 kB]
308s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 m4 arm64 1.4.19-4 [240 kB]
308s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 autoconf all 2.71-3 [339 kB]
308s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 automake all 1:1.16.5-1.3ubuntu1 [558 kB]
308s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 autopoint all 0.21-14ubuntu1 [422 kB]
308s Get:107 http://ftpmaster.internal/ubuntu noble/main arm64 libdebhelper-perl all 13.14.1ubuntu1 [89.5 kB]
308s Get:108 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB]
308s Get:109 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB]
308s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [10.3 MB]
309s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-17ubuntu2 [1028 B]
309s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B]
309s Get:113 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB]
309s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 14-20240303-1ubuntu1 [44.7 kB]
309s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB]
309s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 14-20240303-1ubuntu1 [27.7 kB]
309s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB]
309s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 14-20240303-1ubuntu1 [2919 kB]
309s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 14-20240303-1ubuntu1 [1282 kB]
309s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 14-20240303-1ubuntu1 [2687 kB]
309s Get:121 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 14-20240303-1ubuntu1 [1151 kB]
309s Get:122 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 14-20240303-1ubuntu1 [1597 kB]
309s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-17ubuntu2 [2464 kB]
309s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [20.1 MB]
310s Get:125 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-17ubuntu2 [467 kB]
310s Get:126 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B]
310s Get:127 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B]
310s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.39-0ubuntu2 [19.7 kB]
310s Get:129 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.8.0-11.11 [1569 kB]
310s Get:130 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-4 [136 kB]
310s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1build1 [232 kB]
310s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB]
310s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB]
310s Get:134 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.39-0ubuntu2 [1596 kB]
310s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libtool all 2.4.7-7 [166 kB]
310s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 dh-autoreconf all 20 [16.1 kB]
310s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB]
310s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libsub-override-perl all 0.10-1 [10.0 kB]
310s Get:139 http://ftpmaster.internal/ubuntu noble/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [18.1 kB]
310s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 dh-strip-nondeterminism all 1.13.1-1 [5362 B]
310s Get:141 http://ftpmaster.internal/ubuntu noble/main arm64 libdw1 arm64 0.190-1 [254 kB]
310s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 debugedit arm64 1:5.0-5 [45.9 kB]
310s Get:143 http://ftpmaster.internal/ubuntu noble/main arm64 dwz arm64 0.15-1 [110 kB]
310s Get:144 http://ftpmaster.internal/ubuntu noble/main arm64 gettext arm64 0.21-14ubuntu1 [846 kB]
310s Get:145 http://ftpmaster.internal/ubuntu noble/main arm64 intltool-debian all 0.35.0+20060710.6 [23.2 kB]
310s Get:146 http://ftpmaster.internal/ubuntu noble/main arm64 po-debconf all 1.0.21+nmu1 [233 kB]
310s Get:147 http://ftpmaster.internal/ubuntu noble/main arm64 debhelper all 13.14.1ubuntu1 [869 kB]
310s Get:148 http://ftpmaster.internal/ubuntu noble/main arm64 uuid-dev arm64 2.39.3-6ubuntu2 [34.7 kB]
310s Get:149 http://ftpmaster.internal/ubuntu noble/main arm64 libsctp1 arm64 1.0.19+dfsg-2 [8624 B]
310s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 libsctp-dev arm64 1.0.19+dfsg-2 [51.2 kB]
310s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 libapr1-dev arm64 1.7.2-3 [751 kB]
310s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 libldap-dev arm64 2.6.7+dfsg-1~exp1ubuntu1 [315 kB]
310s Get:153 http://ftpmaster.internal/ubuntu noble/main arm64 libldap2-dev all 2.6.7+dfsg-1~exp1ubuntu1 [11.1 kB]
310s Get:154 http://ftpmaster.internal/ubuntu noble/main arm64 libexpat1-dev arm64 2.6.0-1 [128 kB]
310s Get:155 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1-dev arm64 1.6.3-1ubuntu1 [411 kB]
310s Get:156 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu1 [195 kB]
310s Get:157 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu1 [183 kB]
310s Get:158 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu1 [6654 B]
310s Get:159 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-dev arm64 10.42-4ubuntu1 [679 kB]
310s Get:160 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-dev arm64 2.4.58-1ubuntu2 [199 kB]
310s Get:161 http://ftpmaster.internal/ubuntu noble/main arm64 dh-exec arm64 0.29 [25.6 kB]
310s Get:162 http://ftpmaster.internal/ubuntu noble/universe arm64 libmodule-build-perl all 0.423400-2 [200 kB]
310s Get:163 http://ftpmaster.internal/ubuntu noble/universe arm64 rename all 2.02-1 [20.3 kB]
310s Get:164 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-17ubuntu2 [2322 kB]
310s Get:165 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-17ubuntu2 [11.7 MB]
311s Get:166 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-17ubuntu2 [14.4 kB]
311s Get:167 http://ftpmaster.internal/ubuntu noble/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B]
311s Get:168 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B]
311s Get:169 http://ftpmaster.internal/ubuntu noble/main arm64 build-essential arm64 12.10ubuntu1 [4932 B]
311s Get:170 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB]
311s Get:171 http://ftpmaster.internal/ubuntu noble/main arm64 autodep8 all 0.28 [13.2 kB]
311s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-perl-autopkgtest all 0.77 [18.0 kB]
312s Fetched 88.1 MB in 5s (17.6 MB/s)
312s Selecting previously unselected package libapr1:arm64.
312s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74304 files and directories currently installed.)
312s Preparing to unpack .../00-libapr1_1.7.2-3_arm64.deb ...
312s Unpacking libapr1:arm64 (1.7.2-3) ...
312s Selecting previously unselected package libaprutil1:arm64.
312s Preparing to unpack .../01-libaprutil1_1.6.3-1ubuntu1_arm64.deb ...
312s Unpacking libaprutil1:arm64 (1.6.3-1ubuntu1) ...
312s Selecting previously unselected package libaprutil1-dbd-sqlite3:arm64.
312s Preparing to unpack .../02-libaprutil1-dbd-sqlite3_1.6.3-1ubuntu1_arm64.deb ...
312s Unpacking libaprutil1-dbd-sqlite3:arm64 (1.6.3-1ubuntu1) ...
312s Selecting previously unselected package libaprutil1-ldap:arm64.
312s Preparing to unpack .../03-libaprutil1-ldap_1.6.3-1ubuntu1_arm64.deb ...
312s Unpacking libaprutil1-ldap:arm64 (1.6.3-1ubuntu1) ...
312s Selecting previously unselected package liblua5.4-0:arm64.
312s Preparing to unpack .../04-liblua5.4-0_5.4.6-3_arm64.deb ...
312s Unpacking liblua5.4-0:arm64 (5.4.6-3) ...
312s Selecting previously unselected package apache2-bin.
312s Preparing to unpack .../05-apache2-bin_2.4.58-1ubuntu2_arm64.deb ...
312s Unpacking apache2-bin (2.4.58-1ubuntu2) ...
312s Selecting previously unselected package apache2-data.
312s Preparing to unpack .../06-apache2-data_2.4.58-1ubuntu2_all.deb ...
312s Unpacking apache2-data (2.4.58-1ubuntu2) ...
312s Selecting previously unselected package apache2-utils.
312s Preparing to unpack .../07-apache2-utils_2.4.58-1ubuntu2_arm64.deb ...
312s Unpacking apache2-utils (2.4.58-1ubuntu2) ...
312s Selecting previously unselected package apache2.
312s Preparing to unpack .../08-apache2_2.4.58-1ubuntu2_arm64.deb ...
312s Unpacking apache2 (2.4.58-1ubuntu2) ...
312s Selecting previously unselected package libio-string-perl.
312s Preparing to unpack .../09-libio-string-perl_1.08-4_all.deb ...
312s Unpacking libio-string-perl (1.08-4) ...
312s Selecting previously unselected package libdata-stag-perl.
312s Preparing to unpack .../10-libdata-stag-perl_0.14-3_all.deb ...
312s Unpacking libdata-stag-perl (0.14-3) ...
312s Selecting previously unselected package libbio-perl-perl.
312s Preparing to unpack .../11-libbio-perl-perl_1.7.8-1_all.deb ...
312s Unpacking libbio-perl-perl (1.7.8-1) ...
312s Selecting previously unselected package libclass-data-inheritable-perl.
312s Preparing to unpack .../12-libclass-data-inheritable-perl_0.08-3_all.deb ...
312s Unpacking libclass-data-inheritable-perl (0.08-3) ...
312s Selecting previously unselected package libdevel-stacktrace-perl.
312s Preparing to unpack .../13-libdevel-stacktrace-perl_2.0500-1_all.deb ...
312s Unpacking libdevel-stacktrace-perl (2.0500-1) ...
312s Selecting previously unselected package libexception-class-perl.
312s Preparing to unpack .../14-libexception-class-perl_1.45-1_all.deb ...
312s Unpacking libexception-class-perl (1.45-1) ...
312s Selecting previously unselected package libtest-deep-perl.
312s Preparing to unpack .../15-libtest-deep-perl_1.204-1_all.deb ...
312s Unpacking libtest-deep-perl (1.204-1) ...
312s Selecting previously unselected package libcapture-tiny-perl.
312s Preparing to unpack .../16-libcapture-tiny-perl_0.48-2_all.deb ...
312s Unpacking libcapture-tiny-perl (0.48-2) ...
312s Selecting previously unselected package libalgorithm-diff-perl.
312s Preparing to unpack .../17-libalgorithm-diff-perl_1.201-1_all.deb ...
312s Unpacking libalgorithm-diff-perl (1.201-1) ...
312s Selecting previously unselected package libtext-diff-perl.
312s Preparing to unpack .../18-libtext-diff-perl_1.45-2_all.deb ...
312s Unpacking libtext-diff-perl (1.45-2) ...
312s Selecting previously unselected package libtest-differences-perl.
312s Preparing to unpack .../19-libtest-differences-perl_0.71-1_all.deb ...
312s Unpacking libtest-differences-perl (0.71-1) ...
312s Selecting previously unselected package libsub-uplevel-perl.
313s Preparing to unpack .../20-libsub-uplevel-perl_0.2800-3_all.deb ...
313s Unpacking libsub-uplevel-perl (0.2800-3) ...
313s Selecting previously unselected package libtest-exception-perl.
313s Preparing to unpack .../21-libtest-exception-perl_0.43-3_all.deb ...
313s Unpacking libtest-exception-perl (0.43-3) ...
313s Selecting previously unselected package libtest-warn-perl.
313s Preparing to unpack .../22-libtest-warn-perl_0.37-2_all.deb ...
313s Unpacking libtest-warn-perl (0.37-2) ...
313s Selecting previously unselected package libtest-most-perl.
313s Preparing to unpack .../23-libtest-most-perl_0.38-1_all.deb ...
313s Unpacking libtest-most-perl (0.38-1) ...
313s Selecting previously unselected package bioperl.
313s Preparing to unpack .../24-bioperl_1.7.8-1_all.deb ...
313s Unpacking bioperl (1.7.8-1) ...
313s Selecting previously unselected package fonts-dejavu-mono.
313s Preparing to unpack .../25-fonts-dejavu-mono_2.37-8_all.deb ...
313s Unpacking fonts-dejavu-mono (2.37-8) ...
313s Selecting previously unselected package fonts-dejavu-core.
313s Preparing to unpack .../26-fonts-dejavu-core_2.37-8_all.deb ...
313s Unpacking fonts-dejavu-core (2.37-8) ...
313s Selecting previously unselected package fontconfig-config.
313s Preparing to unpack .../27-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ...
313s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
313s Selecting previously unselected package libfontconfig1:arm64.
313s Preparing to unpack .../28-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ...
313s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
313s Selecting previously unselected package libjpeg-turbo8:arm64.
313s Preparing to unpack .../29-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ...
313s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
313s Selecting previously unselected package libjpeg8:arm64.
313s Preparing to unpack .../30-libjpeg8_8c-2ubuntu11_arm64.deb ...
313s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
313s Selecting previously unselected package libdeflate0:arm64.
313s Preparing to unpack .../31-libdeflate0_1.19-1_arm64.deb ...
313s Unpacking libdeflate0:arm64 (1.19-1) ...
313s Selecting previously unselected package libjbig0:arm64.
313s Preparing to unpack .../32-libjbig0_2.1-6.1ubuntu1_arm64.deb ...
313s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ...
313s Selecting previously unselected package liblerc4:arm64.
313s Preparing to unpack .../33-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ...
313s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
313s Selecting previously unselected package libsharpyuv0:arm64.
313s Preparing to unpack .../34-libsharpyuv0_1.3.2-0.4_arm64.deb ...
313s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ...
313s Selecting previously unselected package libwebp7:arm64.
313s Preparing to unpack .../35-libwebp7_1.3.2-0.4_arm64.deb ...
313s Unpacking libwebp7:arm64 (1.3.2-0.4) ...
313s Selecting previously unselected package libtiff6:arm64.
313s Preparing to unpack .../36-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ...
313s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
313s Selecting previously unselected package libxpm4:arm64.
313s Preparing to unpack .../37-libxpm4_1%3a3.5.17-1_arm64.deb ...
313s Unpacking libxpm4:arm64 (1:3.5.17-1) ...
313s Selecting previously unselected package libgd3:arm64.
313s Preparing to unpack .../38-libgd3_2.3.3-9ubuntu1_arm64.deb ...
313s Unpacking libgd3:arm64 (2.3.3-9ubuntu1) ...
313s Selecting previously unselected package libgd-perl.
313s Preparing to unpack .../39-libgd-perl_2.78-1build1_arm64.deb ...
313s Unpacking libgd-perl (2.78-1build1) ...
313s Selecting previously unselected package libdevel-symdump-perl.
313s Preparing to unpack .../40-libdevel-symdump-perl_2.18-5_all.deb ...
313s Unpacking libdevel-symdump-perl (2.18-5) ...
313s Selecting previously unselected package liburi-perl.
313s Preparing to unpack .../41-liburi-perl_5.27-1_all.deb ...
313s Unpacking liburi-perl (5.27-1) ...
313s Selecting previously unselected package libencode-locale-perl.
314s Preparing to unpack .../42-libencode-locale-perl_1.05-3_all.deb ...
314s Unpacking libencode-locale-perl (1.05-3) ...
314s Selecting previously unselected package libtimedate-perl.
314s Preparing to unpack .../43-libtimedate-perl_2.3300-2_all.deb ...
314s Unpacking libtimedate-perl (2.3300-2) ...
314s Selecting previously unselected package libhttp-date-perl.
314s Preparing to unpack .../44-libhttp-date-perl_6.06-1_all.deb ...
314s Unpacking libhttp-date-perl (6.06-1) ...
314s Selecting previously unselected package libfile-listing-perl.
314s Preparing to unpack .../45-libfile-listing-perl_6.16-1_all.deb ...
314s Unpacking libfile-listing-perl (6.16-1) ...
314s Selecting previously unselected package libhtml-tagset-perl.
314s Preparing to unpack .../46-libhtml-tagset-perl_3.20-6_all.deb ...
314s Unpacking libhtml-tagset-perl (3.20-6) ...
314s Selecting previously unselected package libhtml-parser-perl:arm64.
314s Preparing to unpack .../47-libhtml-parser-perl_3.81-1build1_arm64.deb ...
314s Unpacking libhtml-parser-perl:arm64 (3.81-1build1) ...
314s Selecting previously unselected package libhtml-tree-perl.
314s Preparing to unpack .../48-libhtml-tree-perl_5.07-3_all.deb ...
314s Unpacking libhtml-tree-perl (5.07-3) ...
314s Selecting previously unselected package libclone-perl:arm64.
314s Preparing to unpack .../49-libclone-perl_0.46-1build1_arm64.deb ...
314s Unpacking libclone-perl:arm64 (0.46-1build1) ...
314s Selecting previously unselected package libio-html-perl.
314s Preparing to unpack .../50-libio-html-perl_1.004-3_all.deb ...
314s Unpacking libio-html-perl (1.004-3) ...
314s Selecting previously unselected package liblwp-mediatypes-perl.
314s Preparing to unpack .../51-liblwp-mediatypes-perl_6.04-2_all.deb ...
314s Unpacking liblwp-mediatypes-perl (6.04-2) ...
314s Selecting previously unselected package libhttp-message-perl.
314s Preparing to unpack .../52-libhttp-message-perl_6.45-1ubuntu1_all.deb ...
314s Unpacking libhttp-message-perl (6.45-1ubuntu1) ...
314s Selecting previously unselected package libhttp-cookies-perl.
314s Preparing to unpack .../53-libhttp-cookies-perl_6.11-1_all.deb ...
314s Unpacking libhttp-cookies-perl (6.11-1) ...
314s Selecting previously unselected package libhttp-negotiate-perl.
314s Preparing to unpack .../54-libhttp-negotiate-perl_6.01-2_all.deb ...
314s Unpacking libhttp-negotiate-perl (6.01-2) ...
314s Selecting previously unselected package perl-openssl-defaults:arm64.
314s Preparing to unpack .../55-perl-openssl-defaults_7_arm64.deb ...
314s Unpacking perl-openssl-defaults:arm64 (7) ...
314s Selecting previously unselected package libnet-ssleay-perl:arm64.
314s Preparing to unpack .../56-libnet-ssleay-perl_1.94-1_arm64.deb ...
314s Unpacking libnet-ssleay-perl:arm64 (1.94-1) ...
314s Selecting previously unselected package libio-socket-ssl-perl.
314s Preparing to unpack .../57-libio-socket-ssl-perl_2.085-1_all.deb ...
314s Unpacking libio-socket-ssl-perl (2.085-1) ...
314s Selecting previously unselected package libnet-http-perl.
314s Preparing to unpack .../58-libnet-http-perl_6.23-1_all.deb ...
314s Unpacking libnet-http-perl (6.23-1) ...
314s Selecting previously unselected package liblwp-protocol-https-perl.
314s Preparing to unpack .../59-liblwp-protocol-https-perl_6.13-1_all.deb ...
314s Unpacking liblwp-protocol-https-perl (6.13-1) ...
314s Selecting previously unselected package libtry-tiny-perl.
314s Preparing to unpack .../60-libtry-tiny-perl_0.31-2_all.deb ...
314s Unpacking libtry-tiny-perl (0.31-2) ...
314s Selecting previously unselected package libwww-robotrules-perl.
314s Preparing to unpack .../61-libwww-robotrules-perl_6.02-1_all.deb ...
314s Unpacking libwww-robotrules-perl (6.02-1) ...
314s Selecting previously unselected package libwww-perl.
314s Preparing to unpack .../62-libwww-perl_6.76-1_all.deb ...
314s Unpacking libwww-perl (6.76-1) ...
314s Selecting previously unselected package libapache2-mod-perl2.
314s Preparing to unpack .../63-libapache2-mod-perl2_2.0.13-1build1_arm64.deb ...
314s Unpacking libapache2-mod-perl2 (2.0.13-1build1) ...
314s Selecting previously unselected package libdbi-perl:arm64.
314s Preparing to unpack .../64-libdbi-perl_1.643-4build1_arm64.deb ...
314s Unpacking libdbi-perl:arm64 (1.643-4build1) ...
314s Selecting previously unselected package libapache-dbi-perl.
314s Preparing to unpack .../65-libapache-dbi-perl_1.12-3_all.deb ...
314s Unpacking libapache-dbi-perl (1.12-3) ...
314s Selecting previously unselected package libbio-db-biofetch-perl.
314s Preparing to unpack .../66-libbio-db-biofetch-perl_1.7.3-4_all.deb ...
314s Unpacking libbio-db-biofetch-perl (1.7.3-4) ...
315s Selecting previously unselected package libcgi-pm-perl.
315s Preparing to unpack .../67-libcgi-pm-perl_4.61-1_all.deb ...
315s Unpacking libcgi-pm-perl (4.61-1) ...
315s Selecting previously unselected package libbio-db-gff-perl.
315s Preparing to unpack .../68-libbio-db-gff-perl_1.7.4-1_all.deb ...
315s Unpacking libbio-db-gff-perl (1.7.4-1) ...
315s Selecting previously unselected package libpq5:arm64.
315s Preparing to unpack .../69-libpq5_16.2-1_arm64.deb ...
315s Unpacking libpq5:arm64 (16.2-1) ...
315s Selecting previously unselected package libdbd-pg-perl.
315s Preparing to unpack .../70-libdbd-pg-perl_3.18.0-1build1_arm64.deb ...
315s Unpacking libdbd-pg-perl (3.18.0-1build1) ...
315s Selecting previously unselected package libdbd-sqlite3-perl:arm64.
315s Preparing to unpack .../71-libdbd-sqlite3-perl_1.74-1build1_arm64.deb ...
315s Unpacking libdbd-sqlite3-perl:arm64 (1.74-1build1) ...
315s Selecting previously unselected package libbio-db-seqfeature-perl.
315s Preparing to unpack .../72-libbio-db-seqfeature-perl_1.7.4-2_all.deb ...
315s Unpacking libbio-db-seqfeature-perl (1.7.4-2) ...
315s Selecting previously unselected package libbio-graphics-perl.
315s Preparing to unpack .../73-libbio-graphics-perl_2.40-6_all.deb ...
315s Unpacking libbio-graphics-perl (2.40-6) ...
315s Selecting previously unselected package libbio-coordinate-perl.
315s Preparing to unpack .../74-libbio-coordinate-perl_1.7.1-4_all.deb ...
315s Unpacking libbio-coordinate-perl (1.7.1-4) ...
315s Selecting previously unselected package libcgi-session-perl.
315s Preparing to unpack .../75-libcgi-session-perl_4.48-4_all.deb ...
315s Unpacking libcgi-session-perl (4.48-4) ...
315s Selecting previously unselected package libjson-perl.
315s Preparing to unpack .../76-libjson-perl_4.10000-1_all.deb ...
315s Unpacking libjson-perl (4.10000-1) ...
315s Selecting previously unselected package libexporter-tiny-perl.
315s Preparing to unpack .../77-libexporter-tiny-perl_1.006002-1_all.deb ...
315s Unpacking libexporter-tiny-perl (1.006002-1) ...
315s Selecting previously unselected package liblist-moreutils-xs-perl.
315s Preparing to unpack .../78-liblist-moreutils-xs-perl_0.430-3build3_arm64.deb ...
315s Unpacking liblist-moreutils-xs-perl (0.430-3build3) ...
315s Selecting previously unselected package liblist-moreutils-perl.
315s Preparing to unpack .../79-liblist-moreutils-perl_0.430-2_all.deb ...
315s Unpacking liblist-moreutils-perl (0.430-2) ...
315s Selecting previously unselected package libstatistics-descriptive-perl.
315s Preparing to unpack .../80-libstatistics-descriptive-perl_3.0801-1_all.deb ...
315s Unpacking libstatistics-descriptive-perl (3.0801-1) ...
315s Selecting previously unselected package libhttp-daemon-perl.
315s Preparing to unpack .../81-libhttp-daemon-perl_6.16-1_all.deb ...
315s Unpacking libhttp-daemon-perl (6.16-1) ...
315s Selecting previously unselected package libterm-readkey-perl.
315s Preparing to unpack .../82-libterm-readkey-perl_2.38-2build2_arm64.deb ...
315s Unpacking libterm-readkey-perl (2.38-2build2) ...
315s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested:
315s  parted depends on libreadline8 (>= 6.0).
315s  libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta).
315s  gpgsm depends on libreadline8 (>= 6.0).
315s  gpgconf depends on libreadline8 (>= 6.0).
315s  gpg depends on libreadline8 (>= 6.0).
315s  gawk depends on libreadline8 (>= 6.0).
315s  fdisk depends on libreadline8 (>= 6.0).
315s 
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315s Removing libreadline8:arm64 (8.2-3) ...
315s Selecting previously unselected package libreadline8t64:arm64.
315s (Reading database ... 
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315s Preparing to unpack .../00-libreadline8t64_8.2-3.1_arm64.deb ...
315s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
315s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
315s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
315s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
315s Unpacking libreadline8t64:arm64 (8.2-3.1) ...
315s Selecting previously unselected package sqlite3.
315s Preparing to unpack .../01-sqlite3_3.45.1-1ubuntu1_arm64.deb ...
315s Unpacking sqlite3 (3.45.1-1ubuntu1) ...
315s Selecting previously unselected package libjs-prototype.
315s Preparing to unpack .../02-libjs-prototype_1.7.3-1_all.deb ...
315s Unpacking libjs-prototype (1.7.3-1) ...
315s Selecting previously unselected package libjs-scriptaculous.
315s Preparing to unpack .../03-libjs-scriptaculous_1.9.0-3_all.deb ...
315s Unpacking libjs-scriptaculous (1.9.0-3) ...
315s Selecting previously unselected package libanyevent-perl.
315s Preparing to unpack .../04-libanyevent-perl_7.170-2build4_arm64.deb ...
315s Unpacking libanyevent-perl (7.170-2build4) ...
315s Selecting previously unselected package libanyevent-cachedns-perl.
315s Preparing to unpack .../05-libanyevent-cachedns-perl_0.08-3_all.deb ...
315s Unpacking libanyevent-cachedns-perl (0.08-3) ...
315s Selecting previously unselected package libcommon-sense-perl:arm64.
315s Preparing to unpack .../06-libcommon-sense-perl_3.75-3build1_arm64.deb ...
315s Unpacking libcommon-sense-perl:arm64 (3.75-3build1) ...
315s Selecting previously unselected package libanyevent-http-perl.
315s Preparing to unpack .../07-libanyevent-http-perl_2.25-2_all.deb ...
315s Unpacking libanyevent-http-perl (2.25-2) ...
315s Selecting previously unselected package libstring-approx-perl.
315s Preparing to unpack .../08-libstring-approx-perl_3.28-2build2_arm64.deb ...
315s Unpacking libstring-approx-perl (3.28-2build2) ...
315s Selecting previously unselected package libxml-namespacesupport-perl.
315s Preparing to unpack .../09-libxml-namespacesupport-perl_1.12-2_all.deb ...
315s Unpacking libxml-namespacesupport-perl (1.12-2) ...
315s Selecting previously unselected package libxml-sax-base-perl.
315s Preparing to unpack .../10-libxml-sax-base-perl_1.09-3_all.deb ...
315s Unpacking libxml-sax-base-perl (1.09-3) ...
316s Selecting previously unselected package libxml-sax-perl.
316s Preparing to unpack .../11-libxml-sax-perl_1.02+dfsg-3_all.deb ...
316s Unpacking libxml-sax-perl (1.02+dfsg-3) ...
316s Selecting previously unselected package libxml-libxml-perl.
316s Preparing to unpack .../12-libxml-libxml-perl_2.0207+dfsg+really+2.0134-1build2_arm64.deb ...
316s Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-1build2) ...
316s Selecting previously unselected package libxml-simple-perl.
316s Preparing to unpack .../13-libxml-simple-perl_2.25-2_all.deb ...
316s Unpacking libxml-simple-perl (2.25-2) ...
316s Selecting previously unselected package libvm-ec2-perl.
316s Preparing to unpack .../14-libvm-ec2-perl_1.28-4_all.deb ...
316s Unpacking libvm-ec2-perl (1.28-4) ...
316s Selecting previously unselected package gbrowse.
316s Preparing to unpack .../15-gbrowse_2.56+dfsg-12build1_all.deb ...
316s Unpacking gbrowse (2.56+dfsg-12build1) ...
316s Selecting previously unselected package gbrowse-data.
316s Preparing to unpack .../16-gbrowse-data_2.56+dfsg-12build1_all.deb ...
316s Unpacking gbrowse-data (2.56+dfsg-12build1) ...
316s Selecting previously unselected package gbrowse-calign:arm64.
316s Preparing to unpack .../17-gbrowse-calign_2.56+dfsg-12build1_arm64.deb ...
316s Unpacking gbrowse-calign:arm64 (2.56+dfsg-12build1) ...
316s Selecting previously unselected package autotools-dev.
316s Preparing to unpack .../18-autotools-dev_20220109.1_all.deb ...
316s Unpacking autotools-dev (20220109.1) ...
316s Selecting previously unselected package m4.
316s Preparing to unpack .../19-m4_1.4.19-4_arm64.deb ...
316s Unpacking m4 (1.4.19-4) ...
316s Selecting previously unselected package autoconf.
316s Preparing to unpack .../20-autoconf_2.71-3_all.deb ...
316s Unpacking autoconf (2.71-3) ...
316s Selecting previously unselected package automake.
316s Preparing to unpack .../21-automake_1%3a1.16.5-1.3ubuntu1_all.deb ...
316s Unpacking automake (1:1.16.5-1.3ubuntu1) ...
316s Selecting previously unselected package autopoint.
316s Preparing to unpack .../22-autopoint_0.21-14ubuntu1_all.deb ...
316s Unpacking autopoint (0.21-14ubuntu1) ...
316s Selecting previously unselected package libdebhelper-perl.
316s Preparing to unpack .../23-libdebhelper-perl_13.14.1ubuntu1_all.deb ...
316s Unpacking libdebhelper-perl (13.14.1ubuntu1) ...
316s Selecting previously unselected package libisl23:arm64.
316s Preparing to unpack .../24-libisl23_0.26-3_arm64.deb ...
316s Unpacking libisl23:arm64 (0.26-3) ...
316s Selecting previously unselected package libmpc3:arm64.
316s Preparing to unpack .../25-libmpc3_1.3.1-1_arm64.deb ...
316s Unpacking libmpc3:arm64 (1.3.1-1) ...
316s Selecting previously unselected package cpp-13-aarch64-linux-gnu.
316s Preparing to unpack .../26-cpp-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
316s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
316s Selecting previously unselected package cpp-13.
316s Preparing to unpack .../27-cpp-13_13.2.0-17ubuntu2_arm64.deb ...
316s Unpacking cpp-13 (13.2.0-17ubuntu2) ...
316s Selecting previously unselected package cpp-aarch64-linux-gnu.
316s Preparing to unpack .../28-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
316s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
316s Selecting previously unselected package cpp.
316s Preparing to unpack .../29-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ...
316s Unpacking cpp (4:13.2.0-7ubuntu1) ...
316s Selecting previously unselected package libcc1-0:arm64.
316s Preparing to unpack .../30-libcc1-0_14-20240303-1ubuntu1_arm64.deb ...
316s Unpacking libcc1-0:arm64 (14-20240303-1ubuntu1) ...
317s Selecting previously unselected package libgomp1:arm64.
317s Preparing to unpack .../31-libgomp1_14-20240303-1ubuntu1_arm64.deb ...
317s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ...
317s Selecting previously unselected package libitm1:arm64.
317s Preparing to unpack .../32-libitm1_14-20240303-1ubuntu1_arm64.deb ...
317s Unpacking libitm1:arm64 (14-20240303-1ubuntu1) ...
317s Selecting previously unselected package libatomic1:arm64.
317s Preparing to unpack .../33-libatomic1_14-20240303-1ubuntu1_arm64.deb ...
317s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ...
317s Selecting previously unselected package libasan8:arm64.
317s Preparing to unpack .../34-libasan8_14-20240303-1ubuntu1_arm64.deb ...
317s Unpacking libasan8:arm64 (14-20240303-1ubuntu1) ...
317s Selecting previously unselected package liblsan0:arm64.
317s Preparing to unpack .../35-liblsan0_14-20240303-1ubuntu1_arm64.deb ...
317s Unpacking liblsan0:arm64 (14-20240303-1ubuntu1) ...
317s Selecting previously unselected package libtsan2:arm64.
317s Preparing to unpack .../36-libtsan2_14-20240303-1ubuntu1_arm64.deb ...
317s Unpacking libtsan2:arm64 (14-20240303-1ubuntu1) ...
317s Selecting previously unselected package libubsan1:arm64.
317s Preparing to unpack .../37-libubsan1_14-20240303-1ubuntu1_arm64.deb ...
317s Unpacking libubsan1:arm64 (14-20240303-1ubuntu1) ...
317s Selecting previously unselected package libhwasan0:arm64.
317s Preparing to unpack .../38-libhwasan0_14-20240303-1ubuntu1_arm64.deb ...
317s Unpacking libhwasan0:arm64 (14-20240303-1ubuntu1) ...
317s Selecting previously unselected package libgcc-13-dev:arm64.
317s Preparing to unpack .../39-libgcc-13-dev_13.2.0-17ubuntu2_arm64.deb ...
317s Unpacking libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ...
317s Selecting previously unselected package gcc-13-aarch64-linux-gnu.
317s Preparing to unpack .../40-gcc-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
317s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
317s Selecting previously unselected package gcc-13.
317s Preparing to unpack .../41-gcc-13_13.2.0-17ubuntu2_arm64.deb ...
317s Unpacking gcc-13 (13.2.0-17ubuntu2) ...
317s Selecting previously unselected package gcc-aarch64-linux-gnu.
318s Preparing to unpack .../42-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
318s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
318s Selecting previously unselected package gcc.
318s Preparing to unpack .../43-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ...
318s Unpacking gcc (4:13.2.0-7ubuntu1) ...
318s Selecting previously unselected package libc-dev-bin.
318s Preparing to unpack .../44-libc-dev-bin_2.39-0ubuntu2_arm64.deb ...
318s Unpacking libc-dev-bin (2.39-0ubuntu2) ...
318s Selecting previously unselected package linux-libc-dev:arm64.
318s Preparing to unpack .../45-linux-libc-dev_6.8.0-11.11_arm64.deb ...
318s Unpacking linux-libc-dev:arm64 (6.8.0-11.11) ...
318s Selecting previously unselected package libcrypt-dev:arm64.
318s Preparing to unpack .../46-libcrypt-dev_1%3a4.4.36-4_arm64.deb ...
318s Unpacking libcrypt-dev:arm64 (1:4.4.36-4) ...
318s Selecting previously unselected package libtirpc-dev:arm64.
318s Preparing to unpack .../47-libtirpc-dev_1.3.4+ds-1build1_arm64.deb ...
318s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1build1) ...
318s Selecting previously unselected package libnsl-dev:arm64.
318s Preparing to unpack .../48-libnsl-dev_1.3.0-3_arm64.deb ...
318s Unpacking libnsl-dev:arm64 (1.3.0-3) ...
318s Selecting previously unselected package rpcsvc-proto.
318s Preparing to unpack .../49-rpcsvc-proto_1.4.2-0ubuntu6_arm64.deb ...
318s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ...
318s Selecting previously unselected package libc6-dev:arm64.
318s Preparing to unpack .../50-libc6-dev_2.39-0ubuntu2_arm64.deb ...
318s Unpacking libc6-dev:arm64 (2.39-0ubuntu2) ...
318s Selecting previously unselected package libtool.
318s Preparing to unpack .../51-libtool_2.4.7-7_all.deb ...
318s Unpacking libtool (2.4.7-7) ...
318s Selecting previously unselected package dh-autoreconf.
318s Preparing to unpack .../52-dh-autoreconf_20_all.deb ...
318s Unpacking dh-autoreconf (20) ...
318s Selecting previously unselected package libarchive-zip-perl.
319s Preparing to unpack .../53-libarchive-zip-perl_1.68-1_all.deb ...
319s Unpacking libarchive-zip-perl (1.68-1) ...
319s Selecting previously unselected package libsub-override-perl.
319s Preparing to unpack .../54-libsub-override-perl_0.10-1_all.deb ...
319s Unpacking libsub-override-perl (0.10-1) ...
319s Selecting previously unselected package libfile-stripnondeterminism-perl.
319s Preparing to unpack .../55-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ...
319s Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ...
319s Selecting previously unselected package dh-strip-nondeterminism.
319s Preparing to unpack .../56-dh-strip-nondeterminism_1.13.1-1_all.deb ...
319s Unpacking dh-strip-nondeterminism (1.13.1-1) ...
319s Selecting previously unselected package libdw1:arm64.
319s Preparing to unpack .../57-libdw1_0.190-1_arm64.deb ...
319s Unpacking libdw1:arm64 (0.190-1) ...
319s Selecting previously unselected package debugedit.
319s Preparing to unpack .../58-debugedit_1%3a5.0-5_arm64.deb ...
319s Unpacking debugedit (1:5.0-5) ...
319s Selecting previously unselected package dwz.
319s Preparing to unpack .../59-dwz_0.15-1_arm64.deb ...
319s Unpacking dwz (0.15-1) ...
319s Selecting previously unselected package gettext.
319s Preparing to unpack .../60-gettext_0.21-14ubuntu1_arm64.deb ...
319s Unpacking gettext (0.21-14ubuntu1) ...
319s Selecting previously unselected package intltool-debian.
319s Preparing to unpack .../61-intltool-debian_0.35.0+20060710.6_all.deb ...
319s Unpacking intltool-debian (0.35.0+20060710.6) ...
319s Selecting previously unselected package po-debconf.
319s Preparing to unpack .../62-po-debconf_1.0.21+nmu1_all.deb ...
319s Unpacking po-debconf (1.0.21+nmu1) ...
319s Selecting previously unselected package debhelper.
319s Preparing to unpack .../63-debhelper_13.14.1ubuntu1_all.deb ...
319s Unpacking debhelper (13.14.1ubuntu1) ...
319s Selecting previously unselected package uuid-dev:arm64.
319s Preparing to unpack .../64-uuid-dev_2.39.3-6ubuntu2_arm64.deb ...
319s Unpacking uuid-dev:arm64 (2.39.3-6ubuntu2) ...
319s Selecting previously unselected package libsctp1:arm64.
319s Preparing to unpack .../65-libsctp1_1.0.19+dfsg-2_arm64.deb ...
319s Unpacking libsctp1:arm64 (1.0.19+dfsg-2) ...
319s Selecting previously unselected package libsctp-dev:arm64.
319s Preparing to unpack .../66-libsctp-dev_1.0.19+dfsg-2_arm64.deb ...
319s Unpacking libsctp-dev:arm64 (1.0.19+dfsg-2) ...
319s Selecting previously unselected package libapr1-dev.
319s Preparing to unpack .../67-libapr1-dev_1.7.2-3_arm64.deb ...
319s Unpacking libapr1-dev (1.7.2-3) ...
319s Selecting previously unselected package libldap-dev:arm64.
319s Preparing to unpack .../68-libldap-dev_2.6.7+dfsg-1~exp1ubuntu1_arm64.deb ...
319s Unpacking libldap-dev:arm64 (2.6.7+dfsg-1~exp1ubuntu1) ...
319s Selecting previously unselected package libldap2-dev.
319s Preparing to unpack .../69-libldap2-dev_2.6.7+dfsg-1~exp1ubuntu1_all.deb ...
319s Unpacking libldap2-dev (2.6.7+dfsg-1~exp1ubuntu1) ...
319s Selecting previously unselected package libexpat1-dev:arm64.
319s Preparing to unpack .../70-libexpat1-dev_2.6.0-1_arm64.deb ...
319s Unpacking libexpat1-dev:arm64 (2.6.0-1) ...
319s Selecting previously unselected package libaprutil1-dev.
319s Preparing to unpack .../71-libaprutil1-dev_1.6.3-1ubuntu1_arm64.deb ...
319s Unpacking libaprutil1-dev (1.6.3-1ubuntu1) ...
320s Selecting previously unselected package libpcre2-16-0:arm64.
320s Preparing to unpack .../72-libpcre2-16-0_10.42-4ubuntu1_arm64.deb ...
320s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu1) ...
320s Selecting previously unselected package libpcre2-32-0:arm64.
320s Preparing to unpack .../73-libpcre2-32-0_10.42-4ubuntu1_arm64.deb ...
320s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu1) ...
320s Selecting previously unselected package libpcre2-posix3:arm64.
320s Preparing to unpack .../74-libpcre2-posix3_10.42-4ubuntu1_arm64.deb ...
320s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu1) ...
320s Selecting previously unselected package libpcre2-dev:arm64.
320s Preparing to unpack .../75-libpcre2-dev_10.42-4ubuntu1_arm64.deb ...
320s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu1) ...
320s Selecting previously unselected package apache2-dev.
320s Preparing to unpack .../76-apache2-dev_2.4.58-1ubuntu2_arm64.deb ...
320s Unpacking apache2-dev (2.4.58-1ubuntu2) ...
320s Selecting previously unselected package dh-exec.
320s Preparing to unpack .../77-dh-exec_0.29_arm64.deb ...
320s Unpacking dh-exec (0.29) ...
320s Selecting previously unselected package libmodule-build-perl.
320s Preparing to unpack .../78-libmodule-build-perl_0.423400-2_all.deb ...
320s Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl'
320s Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl'
320s Unpacking libmodule-build-perl (0.423400-2) ...
320s Selecting previously unselected package rename.
320s Preparing to unpack .../79-rename_2.02-1_all.deb ...
320s Unpacking rename (2.02-1) ...
320s Selecting previously unselected package libstdc++-13-dev:arm64.
320s Preparing to unpack .../80-libstdc++-13-dev_13.2.0-17ubuntu2_arm64.deb ...
320s Unpacking libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ...
320s Selecting previously unselected package g++-13-aarch64-linux-gnu.
321s Preparing to unpack .../81-g++-13-aarch64-linux-gnu_13.2.0-17ubuntu2_arm64.deb ...
321s Unpacking g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
321s Selecting previously unselected package g++-13.
321s Preparing to unpack .../82-g++-13_13.2.0-17ubuntu2_arm64.deb ...
321s Unpacking g++-13 (13.2.0-17ubuntu2) ...
321s Selecting previously unselected package g++-aarch64-linux-gnu.
321s Preparing to unpack .../83-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ...
321s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
321s Selecting previously unselected package g++.
321s Preparing to unpack .../84-g++_4%3a13.2.0-7ubuntu1_arm64.deb ...
321s Unpacking g++ (4:13.2.0-7ubuntu1) ...
321s Selecting previously unselected package build-essential.
321s Preparing to unpack .../85-build-essential_12.10ubuntu1_arm64.deb ...
321s Unpacking build-essential (12.10ubuntu1) ...
321s Selecting previously unselected package dctrl-tools.
321s Preparing to unpack .../86-dctrl-tools_2.24-3build2_arm64.deb ...
321s Unpacking dctrl-tools (2.24-3build2) ...
321s Selecting previously unselected package autodep8.
321s Preparing to unpack .../87-autodep8_0.28_all.deb ...
321s Unpacking autodep8 (0.28) ...
321s Selecting previously unselected package pkg-perl-autopkgtest.
321s Preparing to unpack .../88-pkg-perl-autopkgtest_0.77_all.deb ...
321s Unpacking pkg-perl-autopkgtest (0.77) ...
321s Setting up libanyevent-perl (7.170-2build4) ...
321s Setting up libstring-approx-perl (3.28-2build2) ...
321s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ...
321s Setting up libdw1:arm64 (0.190-1) ...
321s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
321s Setting up libxpm4:arm64 (1:3.5.17-1) ...
321s Setting up libtest-deep-perl (1.204-1) ...
321s Setting up libclone-perl:arm64 (0.46-1build1) ...
321s Setting up libalgorithm-diff-perl (1.201-1) ...
321s Setting up libarchive-zip-perl (1.68-1) ...
321s Setting up libhtml-tagset-perl (3.20-6) ...
321s Setting up libdebhelper-perl (13.14.1ubuntu1) ...
321s Setting up liblwp-mediatypes-perl (6.04-2) ...
321s Setting up libtry-tiny-perl (0.31-2) ...
321s Setting up libpq5:arm64 (16.2-1) ...
321s Setting up libdeflate0:arm64 (1.19-1) ...
321s Setting up libapr1:arm64 (1.7.2-3) ...
321s Setting up perl-openssl-defaults:arm64 (7) ...
321s Setting up libcommon-sense-perl:arm64 (3.75-3build1) ...
321s Setting up linux-libc-dev:arm64 (6.8.0-11.11) ...
321s Setting up libxml-namespacesupport-perl (1.12-2) ...
321s Setting up libanyevent-http-perl (2.25-2) ...
321s Setting up m4 (1.4.19-4) ...
321s Setting up libencode-locale-perl (1.05-3) ...
321s Setting up rename (2.02-1) ...
321s update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode
321s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ...
321s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ...
321s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu1) ...
321s Setting up libmodule-build-perl (0.423400-2) ...
321s Setting up libxml-sax-base-perl (1.09-3) ...
321s Setting up libio-string-perl (1.08-4) ...
321s Setting up autotools-dev (20220109.1) ...
321s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu1) ...
321s Setting up libclass-data-inheritable-perl (0.08-3) ...
321s Setting up libtirpc-dev:arm64 (1.3.4+ds-1build1) ...
321s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ...
321s Setting up libtext-diff-perl (1.45-2) ...
321s Setting up gbrowse-data (2.56+dfsg-12build1) ...
321s Setting up libldap-dev:arm64 (2.6.7+dfsg-1~exp1ubuntu1) ...
321s Setting up libanyevent-cachedns-perl (0.08-3) ...
321s Setting up fonts-dejavu-mono (2.37-8) ...
321s Setting up libmpc3:arm64 (1.3.1-1) ...
321s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ...
321s Setting up libio-html-perl (1.004-3) ...
321s Setting up autopoint (0.21-14ubuntu1) ...
321s Setting up fonts-dejavu-core (2.37-8) ...
321s Setting up liblist-moreutils-xs-perl (0.430-3build3) ...
321s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
321s Setting up libjs-prototype (1.7.3-1) ...
321s Setting up autoconf (2.71-3) ...
321s Setting up libwebp7:arm64 (1.3.2-0.4) ...
321s Setting up libcapture-tiny-perl (0.48-2) ...
321s Setting up libtimedate-perl (2.3300-2) ...
321s Setting up libreadline8t64:arm64 (8.2-3.1) ...
321s Setting up libubsan1:arm64 (14-20240303-1ubuntu1) ...
321s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu1) ...
321s Setting up dwz (0.15-1) ...
321s Setting up libsctp1:arm64 (1.0.19+dfsg-2) ...
321s Setting up libdata-stag-perl (0.14-3) ...
321s Setting up libnsl-dev:arm64 (1.3.0-3) ...
321s Setting up libhwasan0:arm64 (14-20240303-1ubuntu1) ...
321s Setting up libcrypt-dev:arm64 (1:4.4.36-4) ...
321s Setting up libasan8:arm64 (14-20240303-1ubuntu1) ...
321s Setting up libjson-perl (4.10000-1) ...
321s Setting up debugedit (1:5.0-5) ...
321s Setting up libsub-uplevel-perl (0.2800-3) ...
321s Setting up liblua5.4-0:arm64 (5.4.6-3) ...
321s Setting up libsub-override-perl (0.10-1) ...
321s Setting up libdevel-stacktrace-perl (2.0500-1) ...
321s Setting up apache2-data (2.4.58-1ubuntu2) ...
321s Setting up libdevel-symdump-perl (2.18-5) ...
321s Setting up libbio-perl-perl (1.7.8-1) ...
321s Setting up libtsan2:arm64 (14-20240303-1ubuntu1) ...
321s Setting up libexporter-tiny-perl (1.006002-1) ...
321s Setting up libterm-readkey-perl (2.38-2build2) ...
321s Setting up libisl23:arm64 (0.26-3) ...
321s Setting up libc-dev-bin (2.39-0ubuntu2) ...
321s Setting up libcc1-0:arm64 (14-20240303-1ubuntu1) ...
321s Setting up liburi-perl (5.27-1) ...
321s Setting up sqlite3 (3.45.1-1ubuntu1) ...
321s Setting up libdbi-perl:arm64 (1.643-4build1) ...
321s Setting up liblsan0:arm64 (14-20240303-1ubuntu1) ...
321s Setting up dctrl-tools (2.24-3build2) ...
321s Setting up libitm1:arm64 (14-20240303-1ubuntu1) ...
321s Setting up autodep8 (0.28) ...
321s Setting up libaprutil1:arm64 (1.6.3-1ubuntu1) ...
321s Setting up libnet-ssleay-perl:arm64 (1.94-1) ...
321s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
321s Setting up automake (1:1.16.5-1.3ubuntu1) ...
321s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
321s Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
321s Setting up libhttp-date-perl (6.06-1) ...
321s Setting up gettext (0.21-14ubuntu1) ...
321s Setting up libfile-listing-perl (6.16-1) ...
321s Setting up cpp-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
321s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
321s Setting up libjs-scriptaculous (1.9.0-3) ...
321s Setting up liblist-moreutils-perl (0.430-2) ...
321s Setting up libtest-warn-perl (0.37-2) ...
321s Setting up libtest-differences-perl (0.71-1) ...
321s Setting up libnet-http-perl (6.23-1) ...
321s Setting up libdbd-pg-perl (3.18.0-1build1) ...
321s Setting up libexception-class-perl (1.45-1) ...
321s Setting up libaprutil1-ldap:arm64 (1.6.3-1ubuntu1) ...
321s Setting up libaprutil1-dbd-sqlite3:arm64 (1.6.3-1ubuntu1) ...
321s Setting up libxml-sax-perl (1.02+dfsg-3) ...
321s update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
322s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
322s 
322s Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
322s Setting up intltool-debian (0.35.0+20060710.6) ...
322s Setting up libldap2-dev (2.6.7+dfsg-1~exp1ubuntu1) ...
322s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
322s Setting up libtest-exception-perl (0.43-3) ...
322s Setting up pkg-perl-autopkgtest (0.77) ...
322s Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1build2) ...
322s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
322s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
322s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
322s Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
322s Setting up dh-strip-nondeterminism (1.13.1-1) ...
322s Setting up libwww-robotrules-perl (6.02-1) ...
322s Setting up libgcc-13-dev:arm64 (13.2.0-17ubuntu2) ...
322s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
322s Setting up libhtml-parser-perl:arm64 (3.81-1build1) ...
322s Setting up libc6-dev:arm64 (2.39-0ubuntu2) ...
322s Setting up libdbd-sqlite3-perl:arm64 (1.74-1build1) ...
322s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
322s Setting up libio-socket-ssl-perl (2.085-1) ...
322s Setting up libstdc++-13-dev:arm64 (13.2.0-17ubuntu2) ...
322s Setting up libhttp-message-perl (6.45-1ubuntu1) ...
322s Setting up apache2-utils (2.4.58-1ubuntu2) ...
322s Setting up libhttp-negotiate-perl (6.01-2) ...
322s Setting up libstatistics-descriptive-perl (3.0801-1) ...
322s Setting up libpcre2-dev:arm64 (10.42-4ubuntu1) ...
322s Setting up cpp-13 (13.2.0-17ubuntu2) ...
322s Setting up libhttp-cookies-perl (6.11-1) ...
322s Setting up libtest-most-perl (0.38-1) ...
322s Setting up po-debconf (1.0.21+nmu1) ...
322s Setting up libhtml-tree-perl (5.07-3) ...
322s Setting up libcgi-pm-perl (4.61-1) ...
322s Setting up gcc-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
322s Setting up apache2-bin (2.4.58-1ubuntu2) ...
322s Setting up libexpat1-dev:arm64 (2.6.0-1) ...
322s Setting up libcgi-session-perl (4.48-4) ...
322s Setting up uuid-dev:arm64 (2.39.3-6ubuntu2) ...
322s Setting up libgd3:arm64 (2.3.3-9ubuntu1) ...
322s Setting up gcc-13 (13.2.0-17ubuntu2) ...
322s Setting up libsctp-dev:arm64 (1.0.19+dfsg-2) ...
322s Setting up libxml-simple-perl (2.25-2) ...
322s Setting up libhttp-daemon-perl (6.16-1) ...
322s Setting up cpp (4:13.2.0-7ubuntu1) ...
322s Setting up bioperl (1.7.8-1) ...
322s Setting up g++-13-aarch64-linux-gnu (13.2.0-17ubuntu2) ...
322s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
322s Setting up g++-13 (13.2.0-17ubuntu2) ...
322s Setting up libtool (2.4.7-7) ...
322s Setting up apache2 (2.4.58-1ubuntu2) ...
322s Enabling module mpm_event.
322s Enabling module authz_core.
322s Enabling module authz_host.
322s Enabling module authn_core.
322s Enabling module auth_basic.
322s Enabling module access_compat.
323s Enabling module authn_file.
323s Enabling module authz_user.
323s Enabling module alias.
323s Enabling module dir.
323s Enabling module autoindex.
323s Enabling module env.
323s Enabling module mime.
323s Enabling module negotiation.
323s Enabling module setenvif.
323s Enabling module filter.
323s Enabling module deflate.
323s Enabling module status.
323s Enabling module reqtimeout.
323s Enabling conf charset.
323s Enabling conf localized-error-pages.
323s Enabling conf other-vhosts-access-log.
323s Enabling conf security.
323s Enabling conf serve-cgi-bin.
323s Enabling site 000-default.
324s Created symlink /etc/systemd/system/multi-user.target.wants/apache2.service → /usr/lib/systemd/system/apache2.service.

325s Created symlink /etc/systemd/system/multi-user.target.wants/apache-htcacheclean.service → /usr/lib/systemd/system/apache-htcacheclean.service.

326s Setting up gcc (4:13.2.0-7ubuntu1) ...
326s Setting up dh-autoreconf (20) ...
326s Setting up libbio-coordinate-perl (1.7.1-4) ...
326s Setting up libgd-perl (2.78-1build1) ...
326s Setting up libapr1-dev (1.7.2-3) ...
326s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ...
326s Setting up libaprutil1-dev (1.6.3-1ubuntu1) ...
326s Setting up debhelper (13.14.1ubuntu1) ...
326s Setting up dh-exec (0.29) ...
326s Setting up g++ (4:13.2.0-7ubuntu1) ...
326s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
326s Setting up build-essential (12.10ubuntu1) ...
326s Setting up apache2-dev (2.4.58-1ubuntu2) ...
326s Setting up libwww-perl (6.76-1) ...
326s Setting up libapache2-mod-perl2 (2.0.13-1build1) ...
326s apache2_invoke: Enable module perl
326s Setting up libbio-db-biofetch-perl (1.7.3-4) ...
326s Setting up liblwp-protocol-https-perl (6.13-1) ...
326s Setting up libvm-ec2-perl (1.28-4) ...
326s Setting up libapache-dbi-perl (1.12-3) ...
326s Setting up libbio-db-gff-perl (1.7.4-1) ...
326s Setting up libbio-db-seqfeature-perl (1.7.4-2) ...
326s Setting up libbio-graphics-perl (2.40-6) ...
326s Setting up gbrowse (2.56+dfsg-12build1) ...
327s apache2_invoke: Enable configuration gbrowse
327s Setting up gbrowse-calign:arm64 (2.56+dfsg-12build1) ...
327s Setting up autopkgtest-satdep (0) ...
327s Processing triggers for libc-bin (2.39-0ubuntu2) ...
327s Processing triggers for ufw (0.36.2-5) ...
327s Processing triggers for man-db (2.12.0-3) ...
329s Processing triggers for install-info (7.1-3) ...
336s (Reading database ... 85606 files and directories currently installed.)
336s Removing autopkgtest-satdep (0) ...
337s autopkgtest [09:00:07]: test autodep8-perl-build-deps: /usr/share/pkg-perl-autopkgtest/runner build-deps
337s autopkgtest [09:00:07]: test autodep8-perl-build-deps: [-----------------------
342s t/00.compile.t ............ 
342s ok 1 - cgi-bin/das compiled ok
342s ok 2 - cgi-bin/das stderr said "syntax OK"
342s ok 3 - cgi-bin/das nothing on stdout
342s ok 4 - cgi-bin/gbgff compiled ok
342s ok 5 - cgi-bin/gbgff stderr said "syntax OK"
342s ok 6 - cgi-bin/gbgff nothing on stdout
342s ok 7 - cgi-bin/gbrowse compiled ok
342s ok 8 - cgi-bin/gbrowse stderr said "syntax OK"
342s ok 9 - cgi-bin/gbrowse nothing on stdout
342s ok 10 - cgi-bin/gbrowse_details compiled ok
342s ok 11 - cgi-bin/gbrowse_details stderr said "syntax OK"
342s ok 12 - cgi-bin/gbrowse_details nothing on stdout
342s ok 13 # skip explicitly skipping cgi-bin/gbrowse_gmap
342s ok 14 - cgi-bin/gbrowse_img compiled ok
342s ok 15 - cgi-bin/gbrowse_img stderr said "syntax OK"
342s ok 16 - cgi-bin/gbrowse_img nothing on stdout
342s ok 17 - cgi-bin/gbrowse_key_img compiled ok
342s ok 18 - cgi-bin/gbrowse_key_img stderr said "syntax OK"
342s ok 19 - cgi-bin/gbrowse_key_img nothing on stdout
342s ok 20 - cgi-bin/gbrowse_login compiled ok
342s ok 21 - cgi-bin/gbrowse_login stderr said "syntax OK"
342s ok 22 - cgi-bin/gbrowse_login nothing on stdout
342s ok 23 - cgi-bin/gbrowse_syn compiled ok
342s ok 24 - cgi-bin/gbrowse_syn stderr said "syntax OK"
342s ok 25 - cgi-bin/gbrowse_syn nothing on stdout
342s ok 26 - bin/auto_install_databases.pl compiled ok
342s ok 27 - bin/auto_install_databases.pl stderr said "syntax OK"
342s ok 28 - bin/auto_install_databases.pl nothing on stdout
342s ok 29 - bin/bed2gff3.pl compiled ok
342s ok 30 - bin/bed2gff3.pl stderr said "syntax OK"
342s ok 31 - bin/bed2gff3.pl nothing on stdout
342s ok 32 - bin/bp_load_gff.pl compiled ok
342s ok 33 - bin/bp_load_gff.pl stderr said "syntax OK"
342s ok 34 - bin/bp_load_gff.pl nothing on stdout
342s ok 35 # skip explicitly skipping bin/gbrowse_aws_balancer.pl
342s ok 36 - bin/gbrowse_change_passwd.pl compiled ok
342s ok 37 - bin/gbrowse_change_passwd.pl stderr said "syntax OK"
342s ok 38 - bin/gbrowse_change_passwd.pl nothing on stdout
342s ok 39 - bin/gbrowse_clean.pl compiled ok
342s ok 40 - bin/gbrowse_clean.pl stderr said "syntax OK"
342s ok 41 - bin/gbrowse_clean.pl nothing on stdout
342s ok 42 - bin/gbrowse_configure_slaves.pl compiled ok
342s ok 43 - bin/gbrowse_configure_slaves.pl stderr said "syntax OK"
342s ok 44 - bin/gbrowse_configure_slaves.pl nothing on stdout
342s ok 45 - bin/gbrowse_create_account.pl compiled ok
342s ok 46 - bin/gbrowse_create_account.pl stderr said "syntax OK"
342s ok 47 - bin/gbrowse_create_account.pl nothing on stdout
342s ok 48 # skip explicitly skipping bin/gbrowse_grow_cloud_vol.pl
342s ok 49 - bin/gbrowse_import_ucsc_db.pl compiled ok
342s ok 50 - bin/gbrowse_import_ucsc_db.pl stderr said "syntax OK"
342s ok 51 - bin/gbrowse_import_ucsc_db.pl nothing on stdout
342s ok 52 - bin/gbrowse_metadb_config.pl compiled ok
342s ok 53 - bin/gbrowse_metadb_config.pl stderr said "syntax OK"
342s ok 54 - bin/gbrowse_metadb_config.pl nothing on stdout
342s ok 55 # skip explicitly skipping bin/gbrowse_netinstall.pl
342s ok 56 # skip explicitly skipping bin/gbrowse_netinstall2.pl
342s ok 57 - bin/gbrowse_set_admin_passwd.pl compiled ok
342s ok 58 - bin/gbrowse_set_admin_passwd.pl stderr said "syntax OK"
342s ok 59 - bin/gbrowse_set_admin_passwd.pl nothing on stdout
342s ok 60 - bin/gbrowse_slave compiled ok
342s ok 61 - bin/gbrowse_slave stderr said "syntax OK"
342s ok 62 - bin/gbrowse_slave nothing on stdout
342s ok 63 # skip explicitly skipping bin/gbrowse_slave_start_aws.sh
342s ok 64 - bin/gbrowse_syn_load_alignment_database.pl compiled ok
342s ok 65 - bin/gbrowse_syn_load_alignment_database.pl stderr said "syntax OK"
342s ok 66 - bin/gbrowse_syn_load_alignment_database.pl nothing on stdout
342s ok 67 - bin/gbrowse_syn_load_alignments_msa.pl compiled ok
342s ok 68 - bin/gbrowse_syn_load_alignments_msa.pl stderr said "syntax OK"
342s ok 69 - bin/gbrowse_syn_load_alignments_msa.pl nothing on stdout
342s ok 70 # skip explicitly skipping bin/gbrowse_sync_aws_slave.pl
342s ok 71 - bin/gtf2gff3.pl compiled ok
342s ok 72 - bin/gtf2gff3.pl stderr said "syntax OK"
342s ok 73 - bin/gtf2gff3.pl nothing on stdout
342s ok 74 - bin/load_genbank.pl compiled ok
342s ok 75 - bin/load_genbank.pl stderr said "syntax OK"
342s ok 76 - bin/load_genbank.pl nothing on stdout
342s ok 77 # skip explicitly skipping bin/make_das_conf.pl
342s ok 78 - bin/process_bamfiles.pl compiled ok
342s ok 79 - bin/process_bamfiles.pl stderr said "syntax OK"
342s ok 80 - bin/process_bamfiles.pl nothing on stdout
342s ok 81 - bin/process_gadfly.pl compiled ok
342s ok 82 - bin/process_gadfly.pl stderr said "syntax OK"
342s ok 83 - bin/process_gadfly.pl nothing on stdout
342s ok 84 - bin/process_ncbi_human.pl compiled ok
342s ok 85 - bin/process_ncbi_human.pl stderr said "syntax OK"
342s ok 86 - bin/process_ncbi_human.pl nothing on stdout
342s ok 87 - bin/process_sgd.pl compiled ok
342s ok 88 - bin/process_sgd.pl stderr said "syntax OK"
342s ok 89 - bin/process_sgd.pl nothing on stdout
342s ok 90 - bin/report_missing_language_tags.pl compiled ok
342s ok 91 - bin/report_missing_language_tags.pl stderr said "syntax OK"
342s ok 92 - bin/report_missing_language_tags.pl nothing on stdout
342s ok 93 - bin/scan_gbrowse.pl compiled ok
342s ok 94 - bin/scan_gbrowse.pl stderr said "syntax OK"
342s ok 95 - bin/scan_gbrowse.pl nothing on stdout
342s ok 96 - bin/split_wig.pl compiled ok
342s ok 97 - bin/split_wig.pl stderr said "syntax OK"
342s ok 98 - bin/split_wig.pl nothing on stdout
342s ok 99 - bin/ucsc_genes2gff.pl compiled ok
342s ok 100 - bin/ucsc_genes2gff.pl stderr said "syntax OK"
342s ok 101 - bin/ucsc_genes2gff.pl nothing on stdout
342s ok 102 - bin/wiggle2gff3.pl compiled ok
342s ok 103 - bin/wiggle2gff3.pl stderr said "syntax OK"
342s ok 104 - bin/wiggle2gff3.pl nothing on stdout
342s 1..104
342s ok
343s t/01.yeast.t .............. 
343s 1..7
343s Use of uninitialized value in subtraction (-) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 778.
343s Use of uninitialized value $curr_line in pattern match (m//) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 781.
343s ok 1
343s ok 2
343s ok 3
343s ok 4
343s ok 5
343s ok 6
343s ok 7
343s ok
344s t/02.rearchitecture.t ..... 
344s 1..90
344s ok 1
344s ok 2
344s ok 3
344s ok 4
344s ok 5
344s ok 6
344s ok 7
344s ok 8
344s ok 9
344s ok 10
344s ok 11
344s ok 12
344s ok 13
344s ok 14
344s ok 15
344s ok 16
344s ok 17
344s ok 18
344s ok 19
344s ok 20
344s ok 21
344s ok 22
344s ok 23
344s ok 24
344s ok 25
344s ok 26
344s ok 27
344s ok 28
344s ok 29
344s ok 30
344s ok 31
344s ok 32
344s ok 33
344s ok 34
344s ok 35
344s ok 36
344s ok 37
344s ok 38
344s ok 39
344s ok 40
344s ok 41
344s ok 42
344s ok 43
344s ok 44
344s ok 45
344s ok 46
344s ok 47
344s ok 48
344s ok 49
344s ok 50
344s ok 51
344s ok 52
344s ok 53
344s ok 54
344s ok 55
344s ok 56
344s ok 57
344s ok 58
344s ok 59
344s ok 60
344s ok 61
344s ok 62
344s ok 63
344s ok 64
344s ok 65
344s ok 66
344s ok 67
344s ok 68
344s ok 69
344s ok 70
344s ok 71
344s ok 72
344s ok 73
344s ok 74
344s ok 75
344s ok 76
344s ok 77
344s ok 78
344s ok 79
344s ok 80
344s ok 81
344s ok 82
344s ok 83
344s ok 84
344s ok 85
344s ok 86
344s ok 87
344s ok 88
344s ok 89
344s ok 90
344s ok
345s t/05.deferredrendering.t .. 
345s 1..19
345s ok 1
345s ok 2
345s ok 3
345s Can't locate testdata/conf/../../../conf/plugins/Aligner.pm in @INC (@INC entries checked: /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/t/testdata /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/t/../lib t /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/blib/lib /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/blib/arch /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z /etc/perl /usr/local/lib/aarch64-linux-gnu/perl/5.38.2 /usr/local/share/perl/5.38.2 /usr/lib/aarch64-linux-gnu/perl5/5.38 /usr/share/perl5 /usr/lib/aarch64-linux-gnu/perl-base /usr/lib/aarch64-linux-gnu/perl/5.38 /usr/share/perl/5.38 /usr/local/lib/site_perl) at /usr/share/perl5/Bio/Graphics/Browser2/PluginSet.pm line 31, <> line 132.
345s Can't locate testdata/conf/../../../conf/plugins/RestrictionAnnotator.pm in @INC (@INC entries checked: /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/t/testdata /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/t/../lib t /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/blib/lib /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/blib/arch /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z /etc/perl /usr/local/lib/aarch64-linux-gnu/perl/5.38.2 /usr/local/share/perl/5.38.2 /usr/lib/aarch64-linux-gnu/perl5/5.38 /usr/share/perl5 /usr/lib/aarch64-linux-gnu/perl-base /usr/lib/aarch64-linux-gnu/perl/5.38 /usr/share/perl/5.38 /usr/local/lib/site_perl) at /usr/share/perl5/Bio/Graphics/Browser2/PluginSet.pm line 31, <> line 132.
345s Can't locate testdata/conf/../../../conf/plugins/ProteinDumper.pm in @INC (@INC entries checked: /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/t/testdata /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/t/../lib t /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/blib/lib /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/blib/arch /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z /etc/perl /usr/local/lib/aarch64-linux-gnu/perl/5.38.2 /usr/local/share/perl/5.38.2 /usr/lib/aarch64-linux-gnu/perl5/5.38 /usr/share/perl5 /usr/lib/aarch64-linux-gnu/perl-base /usr/lib/aarch64-linux-gnu/perl/5.38 /usr/share/perl/5.38 /usr/local/lib/site_perl) at /usr/share/perl5/Bio/Graphics/Browser2/PluginSet.pm line 31, <> line 132.
345s Can't locate testdata/conf/../../../conf/plugins/TestFinder.pm in @INC (@INC entries checked: /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/t/testdata /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/t/../lib t /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/blib/lib /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z/blib/arch /tmp/autopkgtest.fO6Zm9/autopkgtest_tmp/smokeaMM18Z /etc/perl /usr/local/lib/aarch64-linux-gnu/perl/5.38.2 /usr/local/share/perl/5.38.2 /usr/lib/aarch64-linux-gnu/perl5/5.38 /usr/share/perl5 /usr/lib/aarch64-linux-gnu/perl-base /usr/lib/aarch64-linux-gnu/perl/5.38 /usr/share/perl/5.38 /usr/local/lib/site_perl) at /usr/share/perl5/Bio/Graphics/Browser2/PluginSet.pm line 31, <> line 132.
345s Use of uninitialized value in subtraction (-) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 778.
345s Use of uninitialized value $curr_line in pattern match (m//) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 781.
345s Use of uninitialized value in subtraction (-) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 778.
345s Use of uninitialized value $curr_line in pattern match (m//) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 781.
345s Use of uninitialized value in subtraction (-) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 778.
345s Use of uninitialized value $curr_line in pattern match (m//) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 781.
345s do "testdata/conf/languages/POSIX.pm" failed, '.' is no longer in @INC; did you mean do "./testdata/conf/languages/POSIX.pm"? at /usr/share/perl5/Bio/Graphics/Browser2/I18n.pm line 76.
345s Use of uninitialized value in subtraction (-) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 778.
345s Use of uninitialized value $curr_line in pattern match (m//) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 781.
345s Use of uninitialized value in subtraction (-) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 778.
345s Use of uninitialized value $curr_line in pattern match (m//) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 781.
345s Use of uninitialized value in subtraction (-) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 778.
345s Use of uninitialized value $curr_line in pattern match (m//) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 781.
345s Can't locate object method "png" via package "\x{89}PNG\r\n\32\n\0\0\0\rIHDR\0\0\3z\0\0\0E\4\3\0\0\0î\x{b9}\x{89}\x{ae}\0\0\0\17PLTEõÞ\x{b3}àÿÿ\0ÿÿÓÓÓ\0\0\0(âÐç\0\0\0\tpHYs\0"..."-Iî\35\x{ab}wémô\x{f7}é\x{b8}\37V/É]Õk\x{8d}\x{ab}ê\x{95}\x{ac}U=UOÕ;Ã!ÃåÁY\x{ab}zª\x{9e}ªw\x{86}C\x{86}Ë\x{83}\x{b3}VõT=Uï\f"... (perhaps you forgot to load "\x{89}PNG\r\n\32\n\0\0\0\rIHDR\0\0\3z\0\0\0E\4\3\0\0\0î\x{b9}\x{89}\x{ae}\0\0\0\17PLTEõÞ\x{b3}àÿÿ\0ÿÿÓÓÓ\0\0\0(âÐç\0\0\0\tpHYs\0"..."-Iî\35\x{ab}wémô\x{f7}é\x{b8}\37V/É]Õk\x{8d}\x{ab}ê\x{95}\x{ac}U=UOÕ;Ã!ÃåÁY\x{ab}zª\x{9e}ªw\x{86}C\x{86}Ë\x{83}\x{b3}VõT=Uï\f"...?) at /usr/share/perl5/Bio/Graphics/Browser2/CachedTrack.pm line 154, <> line 45.
345s Can't locate object method "png" via package "\x{89}PNG\r\n\32\n\0\0\0\rIHDR\0\0\3z\0\0\0E\4\3\0\0\0î\x{b9}\x{89}\x{ae}\0\0\0\17PLTEõÞ\x{b3}àÿÿ\0ÿÿ\0\0\0ÓÓÓ|ü3C\0\0\0\tpHYs\0"..."\177ÞÛô>0\x{bd}[\x{bf}\x{8d}þ\x{be}<ï\x{9b}é\25\x{bd}+\x{bd}Þy\x{95}\36W\x{ad}ô\x{94}\x{9e}Ò\x{bb}â!áÕEU+=\x{a5}\x{a7}ô\x{ae}xHx"... (perhaps you forgot to load "\x{89}PNG\r\n\32\n\0\0\0\rIHDR\0\0\3z\0\0\0E\4\3\0\0\0î\x{b9}\x{89}\x{ae}\0\0\0\17PLTEõÞ\x{b3}àÿÿ\0ÿÿ\0\0\0ÓÓÓ|ü3C\0\0\0\tpHYs\0"..."\177ÞÛô>0\x{bd}[\x{bf}\x{8d}þ\x{be}<ï\x{9b}é\25\x{bd}+\x{bd}Þy\x{95}\36W\x{ad}ô\x{94}\x{9e}Ò\x{bb}â!áÕEU+=\x{a5}\x{a7}ô\x{ae}xHx"...?) at /usr/share/perl5/Bio/Graphics/Browser2/CachedTrack.pm line 154, <> line 45.
345s ok 4
345s ok 5
345s ok 6
345s ok 7
345s ok 8
345s ok 9
345s ok 10
345s ok 11
345s ok 12
345s ok 13
345s ok 14
345s ok 15
345s ok 16
345s ok 17
345s ok 18
345s ok 19
345s ok
345s t/07.balancer.t ........... skipped: Optional module Parse::Apache::ServerStatus not installed
345s t/08.calign.t ............. 
345s 1..6
345s # Running under perl version 5.038002 for linux
345s # Current time local: Mon Mar 11 09:00:15 2024
345s # Current time GMT:   Mon Mar 11 09:00:15 2024
345s # Using Test.pm version 1.31
345s ok 1
345s ok 2
345s ok 3
345s ok 4
345s ok 5
345s ok 6
345s ok
345s All tests successful.
345s Files=6, Tests=226,  7 wallclock secs ( 0.05 usr  0.02 sys +  5.11 cusr  1.19 csys =  6.37 CPU)
345s Result: PASS
346s autopkgtest [09:00:16]: test autodep8-perl-build-deps: -----------------------]
346s autodep8-perl-build-deps PASS
346s autopkgtest [09:00:16]: test autodep8-perl-build-deps:  - - - - - - - - - - results - - - - - - - - - -
347s autopkgtest [09:00:17]: test autodep8-perl: preparing testbed
447s autopkgtest [09:01:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup
448s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
448s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [3976 B]
448s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [2622 kB]
449s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [37.3 kB]
449s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [434 kB]
449s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [581 kB]
449s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
449s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [20.3 kB]
449s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
449s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [2971 kB]
449s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
449s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [39.6 kB]
449s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
451s Fetched 6838 kB in 2s (4296 kB/s)
451s Reading package lists...
454s Reading package lists...
455s Building dependency tree...
455s Reading state information...
456s Calculating upgrade...
457s The following packages will be upgraded:
457s   libsqlite3-0 readline-common
457s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
457s Need to get 760 kB of archives.
457s After this operation, 0 B of additional disk space will be used.
457s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libsqlite3-0 arm64 3.45.1-1ubuntu1 [704 kB]
457s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB]
458s Fetched 760 kB in 1s (1208 kB/s)
458s (Reading database ... 
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(Reading database ... 74748 files and directories currently installed.)
458s Preparing to unpack .../libsqlite3-0_3.45.1-1ubuntu1_arm64.deb ...
458s Unpacking libsqlite3-0:arm64 (3.45.1-1ubuntu1) over (3.45.1-1) ...
458s Preparing to unpack .../readline-common_8.2-3.1_all.deb ...
458s Unpacking readline-common (8.2-3.1) over (8.2-3) ...
458s Setting up libsqlite3-0:arm64 (3.45.1-1ubuntu1) ...
458s Setting up readline-common (8.2-3.1) ...
458s Processing triggers for man-db (2.12.0-3) ...
459s Processing triggers for install-info (7.1-3) ...
459s Processing triggers for libc-bin (2.39-0ubuntu2) ...
459s Reading package lists...
459s Building dependency tree...
459s Reading state information...
460s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
461s sh: Attempting to set up Debian/Ubuntu apt sources automatically
461s sh: Distribution appears to be Ubuntu
462s Reading package lists...
463s Building dependency tree...
463s Reading state information...
463s eatmydata is already the newest version (131-1).
463s dbus is already the newest version (1.14.10-4ubuntu1).
463s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
463s Reading package lists...
464s Building dependency tree...
464s Reading state information...
464s rng-tools-debian is already the newest version (2.4).
464s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
464s Reading package lists...
464s Building dependency tree...
464s Reading state information...
465s haveged is already the newest version (1.9.14-1ubuntu1).
465s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
465s Reading package lists...
465s Building dependency tree...
465s Reading state information...
466s The following packages will be REMOVED:
466s   cloud-init* python3-configobj* python3-debconf*
466s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
466s After this operation, 3248 kB disk space will be freed.
466s (Reading database ... 
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(Reading database ... 74748 files and directories currently installed.)
466s Removing cloud-init (24.1-0ubuntu1) ...
467s Removing python3-configobj (5.0.8-3) ...
468s Removing python3-debconf (1.5.86) ...
468s Processing triggers for man-db (2.12.0-3) ...
468s (Reading database ... 
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(Reading database ... 40%
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(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
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(Reading database ... 90%
(Reading database ... 95%
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(Reading database ... 74359 files and directories currently installed.)
468s Purging configuration files for cloud-init (24.1-0ubuntu1) ...
469s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
469s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
469s Reading package lists...
470s Building dependency tree...
470s Reading state information...
471s linux-generic is already the newest version (6.8.0-11.11+1).
471s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
471s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
471s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
471s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
471s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
473s Reading package lists...
473s Reading package lists...
473s Building dependency tree...
473s Reading state information...
473s Calculating upgrade...
474s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
474s Reading package lists...
474s Building dependency tree...
474s Reading state information...
474s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
474s autopkgtest [09:02:24]: rebooting testbed after setup commands that affected boot
687s autopkgtest [09:05:57]: testbed dpkg architecture: arm64
690s Reading package lists...
691s Building dependency tree...
691s Reading state information...
691s Correcting dependencies...Starting pkgProblemResolver with broken count: 0
691s Starting 2 pkgProblemResolver with broken count: 0
691s Done
691s  Done
692s Starting pkgProblemResolver with broken count: 0
692s Starting 2 pkgProblemResolver with broken count: 0
692s Done
692s The following additional packages will be installed:
692s   apache2 apache2-bin apache2-data apache2-utils autodep8 bioperl dctrl-tools
692s   fontconfig-config fonts-dejavu-core fonts-dejavu-mono gbrowse gbrowse-calign
692s   gbrowse-data libalgorithm-diff-perl libanyevent-cachedns-perl
692s   libanyevent-http-perl libanyevent-perl libapache-dbi-perl
692s   libapache2-mod-perl2 libapr1 libaprutil1 libaprutil1-dbd-sqlite3
692s   libaprutil1-ldap libbio-coordinate-perl libbio-db-biofetch-perl
692s   libbio-db-gff-perl libbio-db-seqfeature-perl libbio-graphics-perl
692s   libbio-perl-perl libcapture-tiny-perl libcgi-pm-perl libcgi-session-perl
692s   libclass-data-inheritable-perl libclone-perl libcommon-sense-perl
692s   libdata-stag-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdeflate0
692s   libdevel-stacktrace-perl libdevel-symdump-perl libencode-locale-perl
692s   libexception-class-perl libexporter-tiny-perl libfile-listing-perl
692s   libfontconfig1 libgd-perl libgd3 libhtml-parser-perl libhtml-tagset-perl
692s   libhtml-tree-perl libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl
692s   libhttp-message-perl libhttp-negotiate-perl libio-html-perl
692s   libio-socket-ssl-perl libio-string-perl libjbig0 libjpeg-turbo8 libjpeg8
692s   libjs-prototype libjs-scriptaculous libjson-perl liblerc4
692s   liblist-moreutils-perl liblist-moreutils-xs-perl liblua5.4-0
692s   liblwp-mediatypes-perl liblwp-protocol-https-perl libnet-http-perl
692s   libnet-ssleay-perl libpq5 libreadline8t64 libsharpyuv0
692s   libstatistics-descriptive-perl libstring-approx-perl libsub-uplevel-perl
692s   libterm-readkey-perl libtest-deep-perl libtest-differences-perl
692s   libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl
692s   libtiff6 libtimedate-perl libtry-tiny-perl liburi-perl libvm-ec2-perl
692s   libwebp7 libwww-perl libwww-robotrules-perl libxml-libxml-perl
692s   libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl
692s   libxml-simple-perl libxpm4 perl-openssl-defaults pkg-perl-autopkgtest
692s   sqlite3
692s Suggested packages:
692s   apache2-doc apache2-suexec-pristine | apache2-suexec-custom www-browser
692s   debtags libfile-nfslock-perl libev-perl libevent-perl libio-async-perl
692s   libpoe-perl libtask-weaken-perl libxml-sax-expatxs-perl libmldbm-perl
692s   libnet-daemon-perl libsql-statement-perl libgd-tools libdata-dump-perl
692s   libio-compress-brotli-perl libcrypt-ssleay-perl libsub-name-perl
692s   libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl debhelper
692s   sqlite3-doc
692s Recommended packages:
692s   ssl-cert bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl
692s   libyaml-perl libace-perl libxml-twig-perl libset-scalar-perl
692s   libalgorithm-diff-xs-perl libasync-interrupt-perl libev-perl | libevent-perl
692s   libguard-perl libapache2-reload-perl libbsd-resource-perl libbio-scf-perl
692s   libberkeleydb-perl libgd-svg-perl bioperl-run | libbio-perl-run-perl
692s   libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl
692s   libconvert-binary-c-perl libdbd-mysql-perl libgraph-perl libgraphviz-perl
692s   libhtml-tableextract-perl libpostscript-perl libsoap-lite-perl
692s   libsort-naturally-perl libspreadsheet-parseexcel-perl
692s   libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl
692s   libxml-dom-xpath-perl libxml-parser-perl libxml-sax-writer-perl
692s   libxml-writer-perl libcgi-fast-perl libfreezethaw-perl perl-tk
692s   libxml-libxslt-perl libmldbm-perl libxml-perl libhtml-format-perl
692s   javascript-common libjson-xs-perl libdata-dump-perl libhtml-form-perl
692s   libmailtools-perl libxml-sax-expat-perl
692s The following packages will be REMOVED:
692s   libreadline8
692s The following NEW packages will be installed:
692s   apache2 apache2-bin apache2-data apache2-utils autodep8 bioperl dctrl-tools
692s   fontconfig-config fonts-dejavu-core fonts-dejavu-mono gbrowse gbrowse-calign
692s   gbrowse-data libalgorithm-diff-perl libanyevent-cachedns-perl
692s   libanyevent-http-perl libanyevent-perl libapache-dbi-perl
692s   libapache2-mod-perl2 libapr1 libaprutil1 libaprutil1-dbd-sqlite3
692s   libaprutil1-ldap libbio-coordinate-perl libbio-db-biofetch-perl
692s   libbio-db-gff-perl libbio-db-seqfeature-perl libbio-graphics-perl
692s   libbio-perl-perl libcapture-tiny-perl libcgi-pm-perl libcgi-session-perl
692s   libclass-data-inheritable-perl libclone-perl libcommon-sense-perl
692s   libdata-stag-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdeflate0
692s   libdevel-stacktrace-perl libdevel-symdump-perl libencode-locale-perl
692s   libexception-class-perl libexporter-tiny-perl libfile-listing-perl
692s   libfontconfig1 libgd-perl libgd3 libhtml-parser-perl libhtml-tagset-perl
692s   libhtml-tree-perl libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl
692s   libhttp-message-perl libhttp-negotiate-perl libio-html-perl
692s   libio-socket-ssl-perl libio-string-perl libjbig0 libjpeg-turbo8 libjpeg8
692s   libjs-prototype libjs-scriptaculous libjson-perl liblerc4
692s   liblist-moreutils-perl liblist-moreutils-xs-perl liblua5.4-0
692s   liblwp-mediatypes-perl liblwp-protocol-https-perl libnet-http-perl
692s   libnet-ssleay-perl libpq5 libreadline8t64 libsharpyuv0
692s   libstatistics-descriptive-perl libstring-approx-perl libsub-uplevel-perl
692s   libterm-readkey-perl libtest-deep-perl libtest-differences-perl
692s   libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl
692s   libtiff6 libtimedate-perl libtry-tiny-perl liburi-perl libvm-ec2-perl
692s   libwebp7 libwww-perl libwww-robotrules-perl libxml-libxml-perl
692s   libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl
692s   libxml-simple-perl libxpm4 perl-openssl-defaults pkg-perl-autopkgtest
693s   sqlite3
693s 0 upgraded, 104 newly installed, 1 to remove and 0 not upgraded.
693s 1 not fully installed or removed.
693s Need to get 18.8 MB of archives.
693s After this operation, 68.7 MB of additional disk space will be used.
693s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 libapr1 arm64 1.7.2-3 [103 kB]
693s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1 arm64 1.6.3-1ubuntu1 [91.7 kB]
693s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1-dbd-sqlite3 arm64 1.6.3-1ubuntu1 [11.0 kB]
693s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1-ldap arm64 1.6.3-1ubuntu1 [8972 B]
693s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB]
693s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-bin arm64 2.4.58-1ubuntu2 [1316 kB]
693s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-data all 2.4.58-1ubuntu2 [163 kB]
693s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-utils arm64 2.4.58-1ubuntu2 [94.9 kB]
693s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 apache2 arm64 2.4.58-1ubuntu2 [90.2 kB]
693s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB]
693s Get:11 http://ftpmaster.internal/ubuntu noble/universe arm64 libdata-stag-perl all 0.14-3 [372 kB]
693s Get:12 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-perl-perl all 1.7.8-1 [2580 kB]
693s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libclass-data-inheritable-perl all 0.08-3 [8084 B]
693s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libdevel-stacktrace-perl all 2.0500-1 [22.1 kB]
693s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libexception-class-perl all 1.45-1 [28.6 kB]
693s Get:16 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-deep-perl all 1.204-1 [47.1 kB]
693s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libcapture-tiny-perl all 0.48-2 [20.2 kB]
693s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libalgorithm-diff-perl all 1.201-1 [41.8 kB]
693s Get:19 http://ftpmaster.internal/ubuntu noble/universe arm64 libtext-diff-perl all 1.45-2 [25.6 kB]
693s Get:20 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-differences-perl all 0.71-1 [15.8 kB]
693s Get:21 http://ftpmaster.internal/ubuntu noble/universe arm64 libsub-uplevel-perl all 0.2800-3 [11.6 kB]
694s Get:22 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-exception-perl all 0.43-3 [13.4 kB]
694s Get:23 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-warn-perl all 0.37-2 [12.6 kB]
694s Get:24 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-most-perl all 0.38-1 [21.5 kB]
694s Get:25 http://ftpmaster.internal/ubuntu noble/universe arm64 bioperl all 1.7.8-1 [216 kB]
694s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
694s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
694s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB]
694s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB]
694s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB]
694s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
694s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB]
694s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB]
694s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB]
694s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB]
694s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB]
694s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB]
694s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB]
694s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libgd3 arm64 2.3.3-9ubuntu1 [119 kB]
694s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libgd-perl arm64 2.78-1build1 [125 kB]
694s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libdevel-symdump-perl all 2.18-5 [12.6 kB]
694s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 liburi-perl all 5.27-1 [88.0 kB]
694s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libencode-locale-perl all 1.05-3 [11.6 kB]
694s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libtimedate-perl all 2.3300-2 [34.0 kB]
694s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-date-perl all 6.06-1 [10.2 kB]
694s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libfile-listing-perl all 6.16-1 [11.3 kB]
694s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-tagset-perl all 3.20-6 [11.3 kB]
694s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-parser-perl arm64 3.81-1build1 [84.8 kB]
694s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-tree-perl all 5.07-3 [200 kB]
694s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libclone-perl arm64 0.46-1build1 [10.4 kB]
694s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libio-html-perl all 1.004-3 [15.9 kB]
694s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.1 kB]
694s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-message-perl all 6.45-1ubuntu1 [78.2 kB]
694s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-cookies-perl all 6.11-1 [18.2 kB]
694s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-negotiate-perl all 6.01-2 [12.4 kB]
694s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 perl-openssl-defaults arm64 7 [7536 B]
694s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 libnet-ssleay-perl arm64 1.94-1 [311 kB]
694s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libio-socket-ssl-perl all 2.085-1 [195 kB]
694s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 libnet-http-perl all 6.23-1 [22.3 kB]
694s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 liblwp-protocol-https-perl all 6.13-1 [9006 B]
694s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libtry-tiny-perl all 0.31-2 [20.8 kB]
694s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libwww-robotrules-perl all 6.02-1 [12.6 kB]
694s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libwww-perl all 6.76-1 [138 kB]
694s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libapache2-mod-perl2 arm64 2.0.13-1build1 [777 kB]
694s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libdbi-perl arm64 1.643-4build1 [718 kB]
694s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 libapache-dbi-perl all 1.12-3 [40.5 kB]
694s Get:67 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-db-biofetch-perl all 1.7.3-4 [17.1 kB]
694s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libcgi-pm-perl all 4.61-1 [185 kB]
694s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-db-gff-perl all 1.7.4-1 [273 kB]
694s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libpq5 arm64 16.2-1 [136 kB]
694s Get:71 http://ftpmaster.internal/ubuntu noble/universe arm64 libdbd-pg-perl arm64 3.18.0-1build1 [191 kB]
694s Get:72 http://ftpmaster.internal/ubuntu noble/universe arm64 libdbd-sqlite3-perl arm64 1.74-1build1 [159 kB]
694s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-db-seqfeature-perl all 1.7.4-2 [169 kB]
694s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-graphics-perl all 2.40-6 [601 kB]
694s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-coordinate-perl all 1.7.1-4 [56.4 kB]
694s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 libcgi-session-perl all 4.48-4 [108 kB]
694s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libjson-perl all 4.10000-1 [81.9 kB]
694s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libexporter-tiny-perl all 1.006002-1 [36.8 kB]
694s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 liblist-moreutils-xs-perl arm64 0.430-3build3 [40.9 kB]
694s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 liblist-moreutils-perl all 0.430-2 [38.2 kB]
694s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libstatistics-descriptive-perl all 3.0801-1 [58.7 kB]
694s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-daemon-perl all 6.16-1 [22.4 kB]
694s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 libterm-readkey-perl arm64 2.38-2build2 [23.1 kB]
694s Get:84 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB]
694s Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 sqlite3 arm64 3.45.1-1ubuntu1 [140 kB]
694s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prototype all 1.7.3-1 [44.8 kB]
694s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-scriptaculous all 1.9.0-3 [92.6 kB]
694s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libanyevent-perl arm64 7.170-2build4 [368 kB]
694s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 libanyevent-cachedns-perl all 0.08-3 [7216 B]
694s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libcommon-sense-perl arm64 3.75-3build1 [20.3 kB]
694s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 libanyevent-http-perl all 2.25-2 [30.3 kB]
694s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 libstring-approx-perl arm64 3.28-2build2 [34.7 kB]
694s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-namespacesupport-perl all 1.12-2 [13.5 kB]
694s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-sax-base-perl all 1.09-3 [18.9 kB]
694s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-sax-perl all 1.02+dfsg-3 [57.0 kB]
695s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1build2 [296 kB]
695s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-simple-perl all 2.25-2 [64.1 kB]
695s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libvm-ec2-perl all 1.28-4 [766 kB]
695s Get:99 http://ftpmaster.internal/ubuntu noble/universe arm64 gbrowse all 2.56+dfsg-12build1 [2181 kB]
695s Get:100 http://ftpmaster.internal/ubuntu noble/universe arm64 gbrowse-data all 2.56+dfsg-12build1 [1226 kB]
695s Get:101 http://ftpmaster.internal/ubuntu noble/universe arm64 gbrowse-calign arm64 2.56+dfsg-12build1 [14.7 kB]
695s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB]
695s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 autodep8 all 0.28 [13.2 kB]
695s Get:104 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-perl-autopkgtest all 0.77 [18.0 kB]
696s Fetched 18.8 MB in 2s (7684 kB/s)
696s Selecting previously unselected package libapr1:arm64.
696s (Reading database ... 
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(Reading database ... 74304 files and directories currently installed.)
696s Preparing to unpack .../00-libapr1_1.7.2-3_arm64.deb ...
696s Unpacking libapr1:arm64 (1.7.2-3) ...
696s Selecting previously unselected package libaprutil1:arm64.
696s Preparing to unpack .../01-libaprutil1_1.6.3-1ubuntu1_arm64.deb ...
696s Unpacking libaprutil1:arm64 (1.6.3-1ubuntu1) ...
696s Selecting previously unselected package libaprutil1-dbd-sqlite3:arm64.
696s Preparing to unpack .../02-libaprutil1-dbd-sqlite3_1.6.3-1ubuntu1_arm64.deb ...
696s Unpacking libaprutil1-dbd-sqlite3:arm64 (1.6.3-1ubuntu1) ...
696s Selecting previously unselected package libaprutil1-ldap:arm64.
696s Preparing to unpack .../03-libaprutil1-ldap_1.6.3-1ubuntu1_arm64.deb ...
696s Unpacking libaprutil1-ldap:arm64 (1.6.3-1ubuntu1) ...
696s Selecting previously unselected package liblua5.4-0:arm64.
696s Preparing to unpack .../04-liblua5.4-0_5.4.6-3_arm64.deb ...
696s Unpacking liblua5.4-0:arm64 (5.4.6-3) ...
696s Selecting previously unselected package apache2-bin.
696s Preparing to unpack .../05-apache2-bin_2.4.58-1ubuntu2_arm64.deb ...
696s Unpacking apache2-bin (2.4.58-1ubuntu2) ...
696s Selecting previously unselected package apache2-data.
696s Preparing to unpack .../06-apache2-data_2.4.58-1ubuntu2_all.deb ...
696s Unpacking apache2-data (2.4.58-1ubuntu2) ...
696s Selecting previously unselected package apache2-utils.
696s Preparing to unpack .../07-apache2-utils_2.4.58-1ubuntu2_arm64.deb ...
696s Unpacking apache2-utils (2.4.58-1ubuntu2) ...
696s Selecting previously unselected package apache2.
696s Preparing to unpack .../08-apache2_2.4.58-1ubuntu2_arm64.deb ...
696s Unpacking apache2 (2.4.58-1ubuntu2) ...
697s Selecting previously unselected package libio-string-perl.
697s Preparing to unpack .../09-libio-string-perl_1.08-4_all.deb ...
697s Unpacking libio-string-perl (1.08-4) ...
697s Selecting previously unselected package libdata-stag-perl.
697s Preparing to unpack .../10-libdata-stag-perl_0.14-3_all.deb ...
697s Unpacking libdata-stag-perl (0.14-3) ...
697s Selecting previously unselected package libbio-perl-perl.
697s Preparing to unpack .../11-libbio-perl-perl_1.7.8-1_all.deb ...
697s Unpacking libbio-perl-perl (1.7.8-1) ...
697s Selecting previously unselected package libclass-data-inheritable-perl.
697s Preparing to unpack .../12-libclass-data-inheritable-perl_0.08-3_all.deb ...
697s Unpacking libclass-data-inheritable-perl (0.08-3) ...
697s Selecting previously unselected package libdevel-stacktrace-perl.
697s Preparing to unpack .../13-libdevel-stacktrace-perl_2.0500-1_all.deb ...
697s Unpacking libdevel-stacktrace-perl (2.0500-1) ...
697s Selecting previously unselected package libexception-class-perl.
697s Preparing to unpack .../14-libexception-class-perl_1.45-1_all.deb ...
697s Unpacking libexception-class-perl (1.45-1) ...
697s Selecting previously unselected package libtest-deep-perl.
697s Preparing to unpack .../15-libtest-deep-perl_1.204-1_all.deb ...
697s Unpacking libtest-deep-perl (1.204-1) ...
697s Selecting previously unselected package libcapture-tiny-perl.
697s Preparing to unpack .../16-libcapture-tiny-perl_0.48-2_all.deb ...
697s Unpacking libcapture-tiny-perl (0.48-2) ...
697s Selecting previously unselected package libalgorithm-diff-perl.
697s Preparing to unpack .../17-libalgorithm-diff-perl_1.201-1_all.deb ...
697s Unpacking libalgorithm-diff-perl (1.201-1) ...
697s Selecting previously unselected package libtext-diff-perl.
697s Preparing to unpack .../18-libtext-diff-perl_1.45-2_all.deb ...
697s Unpacking libtext-diff-perl (1.45-2) ...
697s Selecting previously unselected package libtest-differences-perl.
697s Preparing to unpack .../19-libtest-differences-perl_0.71-1_all.deb ...
697s Unpacking libtest-differences-perl (0.71-1) ...
697s Selecting previously unselected package libsub-uplevel-perl.
697s Preparing to unpack .../20-libsub-uplevel-perl_0.2800-3_all.deb ...
697s Unpacking libsub-uplevel-perl (0.2800-3) ...
697s Selecting previously unselected package libtest-exception-perl.
697s Preparing to unpack .../21-libtest-exception-perl_0.43-3_all.deb ...
697s Unpacking libtest-exception-perl (0.43-3) ...
697s Selecting previously unselected package libtest-warn-perl.
697s Preparing to unpack .../22-libtest-warn-perl_0.37-2_all.deb ...
697s Unpacking libtest-warn-perl (0.37-2) ...
697s Selecting previously unselected package libtest-most-perl.
697s Preparing to unpack .../23-libtest-most-perl_0.38-1_all.deb ...
697s Unpacking libtest-most-perl (0.38-1) ...
697s Selecting previously unselected package bioperl.
697s Preparing to unpack .../24-bioperl_1.7.8-1_all.deb ...
697s Unpacking bioperl (1.7.8-1) ...
697s Selecting previously unselected package fonts-dejavu-mono.
697s Preparing to unpack .../25-fonts-dejavu-mono_2.37-8_all.deb ...
697s Unpacking fonts-dejavu-mono (2.37-8) ...
698s Selecting previously unselected package fonts-dejavu-core.
698s Preparing to unpack .../26-fonts-dejavu-core_2.37-8_all.deb ...
698s Unpacking fonts-dejavu-core (2.37-8) ...
698s Selecting previously unselected package fontconfig-config.
698s Preparing to unpack .../27-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ...
698s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
698s Selecting previously unselected package libfontconfig1:arm64.
698s Preparing to unpack .../28-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ...
698s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
698s Selecting previously unselected package libjpeg-turbo8:arm64.
698s Preparing to unpack .../29-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ...
698s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
698s Selecting previously unselected package libjpeg8:arm64.
698s Preparing to unpack .../30-libjpeg8_8c-2ubuntu11_arm64.deb ...
698s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
698s Selecting previously unselected package libdeflate0:arm64.
698s Preparing to unpack .../31-libdeflate0_1.19-1_arm64.deb ...
698s Unpacking libdeflate0:arm64 (1.19-1) ...
698s Selecting previously unselected package libjbig0:arm64.
698s Preparing to unpack .../32-libjbig0_2.1-6.1ubuntu1_arm64.deb ...
698s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ...
698s Selecting previously unselected package liblerc4:arm64.
698s Preparing to unpack .../33-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ...
698s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
698s Selecting previously unselected package libsharpyuv0:arm64.
698s Preparing to unpack .../34-libsharpyuv0_1.3.2-0.4_arm64.deb ...
698s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ...
698s Selecting previously unselected package libwebp7:arm64.
698s Preparing to unpack .../35-libwebp7_1.3.2-0.4_arm64.deb ...
698s Unpacking libwebp7:arm64 (1.3.2-0.4) ...
699s Selecting previously unselected package libtiff6:arm64.
699s Preparing to unpack .../36-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ...
699s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
699s Selecting previously unselected package libxpm4:arm64.
699s Preparing to unpack .../37-libxpm4_1%3a3.5.17-1_arm64.deb ...
699s Unpacking libxpm4:arm64 (1:3.5.17-1) ...
699s Selecting previously unselected package libgd3:arm64.
699s Preparing to unpack .../38-libgd3_2.3.3-9ubuntu1_arm64.deb ...
699s Unpacking libgd3:arm64 (2.3.3-9ubuntu1) ...
699s Selecting previously unselected package libgd-perl.
699s Preparing to unpack .../39-libgd-perl_2.78-1build1_arm64.deb ...
699s Unpacking libgd-perl (2.78-1build1) ...
699s Selecting previously unselected package libdevel-symdump-perl.
699s Preparing to unpack .../40-libdevel-symdump-perl_2.18-5_all.deb ...
699s Unpacking libdevel-symdump-perl (2.18-5) ...
699s Selecting previously unselected package liburi-perl.
699s Preparing to unpack .../41-liburi-perl_5.27-1_all.deb ...
699s Unpacking liburi-perl (5.27-1) ...
699s Selecting previously unselected package libencode-locale-perl.
699s Preparing to unpack .../42-libencode-locale-perl_1.05-3_all.deb ...
699s Unpacking libencode-locale-perl (1.05-3) ...
699s Selecting previously unselected package libtimedate-perl.
699s Preparing to unpack .../43-libtimedate-perl_2.3300-2_all.deb ...
699s Unpacking libtimedate-perl (2.3300-2) ...
699s Selecting previously unselected package libhttp-date-perl.
699s Preparing to unpack .../44-libhttp-date-perl_6.06-1_all.deb ...
699s Unpacking libhttp-date-perl (6.06-1) ...
699s Selecting previously unselected package libfile-listing-perl.
699s Preparing to unpack .../45-libfile-listing-perl_6.16-1_all.deb ...
699s Unpacking libfile-listing-perl (6.16-1) ...
699s Selecting previously unselected package libhtml-tagset-perl.
699s Preparing to unpack .../46-libhtml-tagset-perl_3.20-6_all.deb ...
699s Unpacking libhtml-tagset-perl (3.20-6) ...
699s Selecting previously unselected package libhtml-parser-perl:arm64.
699s Preparing to unpack .../47-libhtml-parser-perl_3.81-1build1_arm64.deb ...
699s Unpacking libhtml-parser-perl:arm64 (3.81-1build1) ...
699s Selecting previously unselected package libhtml-tree-perl.
699s Preparing to unpack .../48-libhtml-tree-perl_5.07-3_all.deb ...
699s Unpacking libhtml-tree-perl (5.07-3) ...
699s Selecting previously unselected package libclone-perl:arm64.
699s Preparing to unpack .../49-libclone-perl_0.46-1build1_arm64.deb ...
699s Unpacking libclone-perl:arm64 (0.46-1build1) ...
699s Selecting previously unselected package libio-html-perl.
699s Preparing to unpack .../50-libio-html-perl_1.004-3_all.deb ...
699s Unpacking libio-html-perl (1.004-3) ...
699s Selecting previously unselected package liblwp-mediatypes-perl.
699s Preparing to unpack .../51-liblwp-mediatypes-perl_6.04-2_all.deb ...
699s Unpacking liblwp-mediatypes-perl (6.04-2) ...
699s Selecting previously unselected package libhttp-message-perl.
699s Preparing to unpack .../52-libhttp-message-perl_6.45-1ubuntu1_all.deb ...
699s Unpacking libhttp-message-perl (6.45-1ubuntu1) ...
699s Selecting previously unselected package libhttp-cookies-perl.
699s Preparing to unpack .../53-libhttp-cookies-perl_6.11-1_all.deb ...
699s Unpacking libhttp-cookies-perl (6.11-1) ...
699s Selecting previously unselected package libhttp-negotiate-perl.
700s Preparing to unpack .../54-libhttp-negotiate-perl_6.01-2_all.deb ...
700s Unpacking libhttp-negotiate-perl (6.01-2) ...
700s Selecting previously unselected package perl-openssl-defaults:arm64.
700s Preparing to unpack .../55-perl-openssl-defaults_7_arm64.deb ...
700s Unpacking perl-openssl-defaults:arm64 (7) ...
700s Selecting previously unselected package libnet-ssleay-perl:arm64.
700s Preparing to unpack .../56-libnet-ssleay-perl_1.94-1_arm64.deb ...
700s Unpacking libnet-ssleay-perl:arm64 (1.94-1) ...
700s Selecting previously unselected package libio-socket-ssl-perl.
700s Preparing to unpack .../57-libio-socket-ssl-perl_2.085-1_all.deb ...
700s Unpacking libio-socket-ssl-perl (2.085-1) ...
700s Selecting previously unselected package libnet-http-perl.
700s Preparing to unpack .../58-libnet-http-perl_6.23-1_all.deb ...
700s Unpacking libnet-http-perl (6.23-1) ...
700s Selecting previously unselected package liblwp-protocol-https-perl.
700s Preparing to unpack .../59-liblwp-protocol-https-perl_6.13-1_all.deb ...
700s Unpacking liblwp-protocol-https-perl (6.13-1) ...
700s Selecting previously unselected package libtry-tiny-perl.
700s Preparing to unpack .../60-libtry-tiny-perl_0.31-2_all.deb ...
700s Unpacking libtry-tiny-perl (0.31-2) ...
700s Selecting previously unselected package libwww-robotrules-perl.
700s Preparing to unpack .../61-libwww-robotrules-perl_6.02-1_all.deb ...
700s Unpacking libwww-robotrules-perl (6.02-1) ...
700s Selecting previously unselected package libwww-perl.
700s Preparing to unpack .../62-libwww-perl_6.76-1_all.deb ...
700s Unpacking libwww-perl (6.76-1) ...
700s Selecting previously unselected package libapache2-mod-perl2.
700s Preparing to unpack .../63-libapache2-mod-perl2_2.0.13-1build1_arm64.deb ...
700s Unpacking libapache2-mod-perl2 (2.0.13-1build1) ...
700s Selecting previously unselected package libdbi-perl:arm64.
700s Preparing to unpack .../64-libdbi-perl_1.643-4build1_arm64.deb ...
700s Unpacking libdbi-perl:arm64 (1.643-4build1) ...
700s Selecting previously unselected package libapache-dbi-perl.
700s Preparing to unpack .../65-libapache-dbi-perl_1.12-3_all.deb ...
700s Unpacking libapache-dbi-perl (1.12-3) ...
700s Selecting previously unselected package libbio-db-biofetch-perl.
700s Preparing to unpack .../66-libbio-db-biofetch-perl_1.7.3-4_all.deb ...
700s Unpacking libbio-db-biofetch-perl (1.7.3-4) ...
700s Selecting previously unselected package libcgi-pm-perl.
700s Preparing to unpack .../67-libcgi-pm-perl_4.61-1_all.deb ...
700s Unpacking libcgi-pm-perl (4.61-1) ...
700s Selecting previously unselected package libbio-db-gff-perl.
700s Preparing to unpack .../68-libbio-db-gff-perl_1.7.4-1_all.deb ...
700s Unpacking libbio-db-gff-perl (1.7.4-1) ...
700s Selecting previously unselected package libpq5:arm64.
700s Preparing to unpack .../69-libpq5_16.2-1_arm64.deb ...
700s Unpacking libpq5:arm64 (16.2-1) ...
700s Selecting previously unselected package libdbd-pg-perl.
700s Preparing to unpack .../70-libdbd-pg-perl_3.18.0-1build1_arm64.deb ...
700s Unpacking libdbd-pg-perl (3.18.0-1build1) ...
700s Selecting previously unselected package libdbd-sqlite3-perl:arm64.
701s Preparing to unpack .../71-libdbd-sqlite3-perl_1.74-1build1_arm64.deb ...
701s Unpacking libdbd-sqlite3-perl:arm64 (1.74-1build1) ...
701s Selecting previously unselected package libbio-db-seqfeature-perl.
701s Preparing to unpack .../72-libbio-db-seqfeature-perl_1.7.4-2_all.deb ...
701s Unpacking libbio-db-seqfeature-perl (1.7.4-2) ...
701s Selecting previously unselected package libbio-graphics-perl.
701s Preparing to unpack .../73-libbio-graphics-perl_2.40-6_all.deb ...
701s Unpacking libbio-graphics-perl (2.40-6) ...
701s Selecting previously unselected package libbio-coordinate-perl.
701s Preparing to unpack .../74-libbio-coordinate-perl_1.7.1-4_all.deb ...
701s Unpacking libbio-coordinate-perl (1.7.1-4) ...
701s Selecting previously unselected package libcgi-session-perl.
701s Preparing to unpack .../75-libcgi-session-perl_4.48-4_all.deb ...
701s Unpacking libcgi-session-perl (4.48-4) ...
701s Selecting previously unselected package libjson-perl.
701s Preparing to unpack .../76-libjson-perl_4.10000-1_all.deb ...
701s Unpacking libjson-perl (4.10000-1) ...
701s Selecting previously unselected package libexporter-tiny-perl.
701s Preparing to unpack .../77-libexporter-tiny-perl_1.006002-1_all.deb ...
701s Unpacking libexporter-tiny-perl (1.006002-1) ...
701s Selecting previously unselected package liblist-moreutils-xs-perl.
701s Preparing to unpack .../78-liblist-moreutils-xs-perl_0.430-3build3_arm64.deb ...
701s Unpacking liblist-moreutils-xs-perl (0.430-3build3) ...
701s Selecting previously unselected package liblist-moreutils-perl.
701s Preparing to unpack .../79-liblist-moreutils-perl_0.430-2_all.deb ...
701s Unpacking liblist-moreutils-perl (0.430-2) ...
701s Selecting previously unselected package libstatistics-descriptive-perl.
701s Preparing to unpack .../80-libstatistics-descriptive-perl_3.0801-1_all.deb ...
701s Unpacking libstatistics-descriptive-perl (3.0801-1) ...
701s Selecting previously unselected package libhttp-daemon-perl.
701s Preparing to unpack .../81-libhttp-daemon-perl_6.16-1_all.deb ...
701s Unpacking libhttp-daemon-perl (6.16-1) ...
701s Selecting previously unselected package libterm-readkey-perl.
701s Preparing to unpack .../82-libterm-readkey-perl_2.38-2build2_arm64.deb ...
701s Unpacking libterm-readkey-perl (2.38-2build2) ...
701s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested:
701s  parted depends on libreadline8 (>= 6.0).
701s  libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta).
701s  gpgsm depends on libreadline8 (>= 6.0).
701s  gpgconf depends on libreadline8 (>= 6.0).
701s  gpg depends on libreadline8 (>= 6.0).
701s  gawk depends on libreadline8 (>= 6.0).
701s  fdisk depends on libreadline8 (>= 6.0).
701s 
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701s Removing libreadline8:arm64 (8.2-3) ...
702s Selecting previously unselected package libreadline8t64:arm64.
702s (Reading database ... 
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702s Preparing to unpack .../00-libreadline8t64_8.2-3.1_arm64.deb ...
702s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
702s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
702s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
702s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
702s Unpacking libreadline8t64:arm64 (8.2-3.1) ...
702s Selecting previously unselected package sqlite3.
702s Preparing to unpack .../01-sqlite3_3.45.1-1ubuntu1_arm64.deb ...
702s Unpacking sqlite3 (3.45.1-1ubuntu1) ...
702s Selecting previously unselected package libjs-prototype.
702s Preparing to unpack .../02-libjs-prototype_1.7.3-1_all.deb ...
702s Unpacking libjs-prototype (1.7.3-1) ...
702s Selecting previously unselected package libjs-scriptaculous.
702s Preparing to unpack .../03-libjs-scriptaculous_1.9.0-3_all.deb ...
702s Unpacking libjs-scriptaculous (1.9.0-3) ...
702s Selecting previously unselected package libanyevent-perl.
702s Preparing to unpack .../04-libanyevent-perl_7.170-2build4_arm64.deb ...
702s Unpacking libanyevent-perl (7.170-2build4) ...
702s Selecting previously unselected package libanyevent-cachedns-perl.
702s Preparing to unpack .../05-libanyevent-cachedns-perl_0.08-3_all.deb ...
702s Unpacking libanyevent-cachedns-perl (0.08-3) ...
702s Selecting previously unselected package libcommon-sense-perl:arm64.
702s Preparing to unpack .../06-libcommon-sense-perl_3.75-3build1_arm64.deb ...
702s Unpacking libcommon-sense-perl:arm64 (3.75-3build1) ...
702s Selecting previously unselected package libanyevent-http-perl.
702s Preparing to unpack .../07-libanyevent-http-perl_2.25-2_all.deb ...
702s Unpacking libanyevent-http-perl (2.25-2) ...
702s Selecting previously unselected package libstring-approx-perl.
702s Preparing to unpack .../08-libstring-approx-perl_3.28-2build2_arm64.deb ...
702s Unpacking libstring-approx-perl (3.28-2build2) ...
702s Selecting previously unselected package libxml-namespacesupport-perl.
702s Preparing to unpack .../09-libxml-namespacesupport-perl_1.12-2_all.deb ...
702s Unpacking libxml-namespacesupport-perl (1.12-2) ...
702s Selecting previously unselected package libxml-sax-base-perl.
702s Preparing to unpack .../10-libxml-sax-base-perl_1.09-3_all.deb ...
702s Unpacking libxml-sax-base-perl (1.09-3) ...
702s Selecting previously unselected package libxml-sax-perl.
702s Preparing to unpack .../11-libxml-sax-perl_1.02+dfsg-3_all.deb ...
702s Unpacking libxml-sax-perl (1.02+dfsg-3) ...
702s Selecting previously unselected package libxml-libxml-perl.
702s Preparing to unpack .../12-libxml-libxml-perl_2.0207+dfsg+really+2.0134-1build2_arm64.deb ...
702s Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-1build2) ...
702s Selecting previously unselected package libxml-simple-perl.
702s Preparing to unpack .../13-libxml-simple-perl_2.25-2_all.deb ...
702s Unpacking libxml-simple-perl (2.25-2) ...
702s Selecting previously unselected package libvm-ec2-perl.
702s Preparing to unpack .../14-libvm-ec2-perl_1.28-4_all.deb ...
702s Unpacking libvm-ec2-perl (1.28-4) ...
703s Selecting previously unselected package gbrowse.
703s Preparing to unpack .../15-gbrowse_2.56+dfsg-12build1_all.deb ...
703s Unpacking gbrowse (2.56+dfsg-12build1) ...
703s Selecting previously unselected package gbrowse-data.
703s Preparing to unpack .../16-gbrowse-data_2.56+dfsg-12build1_all.deb ...
703s Unpacking gbrowse-data (2.56+dfsg-12build1) ...
703s Selecting previously unselected package gbrowse-calign:arm64.
703s Preparing to unpack .../17-gbrowse-calign_2.56+dfsg-12build1_arm64.deb ...
703s Unpacking gbrowse-calign:arm64 (2.56+dfsg-12build1) ...
703s Selecting previously unselected package dctrl-tools.
703s Preparing to unpack .../18-dctrl-tools_2.24-3build2_arm64.deb ...
703s Unpacking dctrl-tools (2.24-3build2) ...
703s Selecting previously unselected package autodep8.
703s Preparing to unpack .../19-autodep8_0.28_all.deb ...
703s Unpacking autodep8 (0.28) ...
703s Selecting previously unselected package pkg-perl-autopkgtest.
703s Preparing to unpack .../20-pkg-perl-autopkgtest_0.77_all.deb ...
703s Unpacking pkg-perl-autopkgtest (0.77) ...
703s Setting up libanyevent-perl (7.170-2build4) ...
703s Setting up libstring-approx-perl (3.28-2build2) ...
703s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ...
703s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
703s Setting up libxpm4:arm64 (1:3.5.17-1) ...
703s Setting up libtest-deep-perl (1.204-1) ...
703s Setting up libclone-perl:arm64 (0.46-1build1) ...
703s Setting up libalgorithm-diff-perl (1.201-1) ...
703s Setting up libhtml-tagset-perl (3.20-6) ...
703s Setting up liblwp-mediatypes-perl (6.04-2) ...
703s Setting up libtry-tiny-perl (0.31-2) ...
703s Setting up libpq5:arm64 (16.2-1) ...
703s Setting up libdeflate0:arm64 (1.19-1) ...
703s Setting up libapr1:arm64 (1.7.2-3) ...
703s Setting up perl-openssl-defaults:arm64 (7) ...
703s Setting up libcommon-sense-perl:arm64 (3.75-3build1) ...
703s Setting up libxml-namespacesupport-perl (1.12-2) ...
703s Setting up libanyevent-http-perl (2.25-2) ...
703s Setting up libencode-locale-perl (1.05-3) ...
703s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ...
703s Setting up libxml-sax-base-perl (1.09-3) ...
703s Setting up libio-string-perl (1.08-4) ...
703s Setting up libclass-data-inheritable-perl (0.08-3) ...
703s Setting up libtext-diff-perl (1.45-2) ...
703s Setting up gbrowse-data (2.56+dfsg-12build1) ...
703s Setting up libanyevent-cachedns-perl (0.08-3) ...
703s Setting up fonts-dejavu-mono (2.37-8) ...
703s Setting up libio-html-perl (1.004-3) ...
703s Setting up fonts-dejavu-core (2.37-8) ...
703s Setting up liblist-moreutils-xs-perl (0.430-3build3) ...
703s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
703s Setting up libjs-prototype (1.7.3-1) ...
703s Setting up libwebp7:arm64 (1.3.2-0.4) ...
703s Setting up libcapture-tiny-perl (0.48-2) ...
703s Setting up libtimedate-perl (2.3300-2) ...
703s Setting up libreadline8t64:arm64 (8.2-3.1) ...
703s Setting up libdata-stag-perl (0.14-3) ...
703s Setting up libjson-perl (4.10000-1) ...
703s Setting up libsub-uplevel-perl (0.2800-3) ...
703s Setting up liblua5.4-0:arm64 (5.4.6-3) ...
703s Setting up libdevel-stacktrace-perl (2.0500-1) ...
703s Setting up apache2-data (2.4.58-1ubuntu2) ...
703s Setting up libdevel-symdump-perl (2.18-5) ...
703s Setting up libbio-perl-perl (1.7.8-1) ...
703s Setting up libexporter-tiny-perl (1.006002-1) ...
703s Setting up libterm-readkey-perl (2.38-2build2) ...
703s Setting up liburi-perl (5.27-1) ...
703s Setting up sqlite3 (3.45.1-1ubuntu1) ...
703s Setting up libdbi-perl:arm64 (1.643-4build1) ...
703s Setting up dctrl-tools (2.24-3build2) ...
703s Setting up autodep8 (0.28) ...
703s Setting up libaprutil1:arm64 (1.6.3-1ubuntu1) ...
703s Setting up libnet-ssleay-perl:arm64 (1.94-1) ...
703s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
703s Setting up libhttp-date-perl (6.06-1) ...
703s Setting up libfile-listing-perl (6.16-1) ...
703s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
704s Setting up libjs-scriptaculous (1.9.0-3) ...
704s Setting up liblist-moreutils-perl (0.430-2) ...
704s Setting up libtest-warn-perl (0.37-2) ...
704s Setting up libtest-differences-perl (0.71-1) ...
704s Setting up libnet-http-perl (6.23-1) ...
704s Setting up libdbd-pg-perl (3.18.0-1build1) ...
704s Setting up libexception-class-perl (1.45-1) ...
704s Setting up libaprutil1-ldap:arm64 (1.6.3-1ubuntu1) ...
704s Setting up libaprutil1-dbd-sqlite3:arm64 (1.6.3-1ubuntu1) ...
704s Setting up libxml-sax-perl (1.02+dfsg-3) ...
704s update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
704s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
704s 
704s Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
704s Setting up libtest-exception-perl (0.43-3) ...
704s Setting up pkg-perl-autopkgtest (0.77) ...
704s Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1build2) ...
704s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
705s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
705s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
705s Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
705s Setting up libwww-robotrules-perl (6.02-1) ...
705s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
705s Setting up libhtml-parser-perl:arm64 (3.81-1build1) ...
705s Setting up libdbd-sqlite3-perl:arm64 (1.74-1build1) ...
705s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
705s Setting up libio-socket-ssl-perl (2.085-1) ...
705s Setting up libhttp-message-perl (6.45-1ubuntu1) ...
705s Setting up apache2-utils (2.4.58-1ubuntu2) ...
705s Setting up libhttp-negotiate-perl (6.01-2) ...
705s Setting up libstatistics-descriptive-perl (3.0801-1) ...
705s Setting up libhttp-cookies-perl (6.11-1) ...
705s Setting up libtest-most-perl (0.38-1) ...
705s Setting up libhtml-tree-perl (5.07-3) ...
705s Setting up libcgi-pm-perl (4.61-1) ...
705s Setting up apache2-bin (2.4.58-1ubuntu2) ...
705s Setting up libcgi-session-perl (4.48-4) ...
705s Setting up libgd3:arm64 (2.3.3-9ubuntu1) ...
705s Setting up libxml-simple-perl (2.25-2) ...
705s Setting up libhttp-daemon-perl (6.16-1) ...
705s Setting up bioperl (1.7.8-1) ...
705s Setting up apache2 (2.4.58-1ubuntu2) ...
705s Enabling module mpm_event.
705s Enabling module authz_core.
705s Enabling module authz_host.
705s Enabling module authn_core.
705s Enabling module auth_basic.
705s Enabling module access_compat.
705s Enabling module authn_file.
705s Enabling module authz_user.
706s Enabling module alias.
706s Enabling module dir.
706s Enabling module autoindex.
706s Enabling module env.
706s Enabling module mime.
706s Enabling module negotiation.
706s Enabling module setenvif.
706s Enabling module filter.
706s Enabling module deflate.
706s Enabling module status.
706s Enabling module reqtimeout.
706s Enabling conf charset.
706s Enabling conf localized-error-pages.
706s Enabling conf other-vhosts-access-log.
706s Enabling conf security.
706s Enabling conf serve-cgi-bin.
706s Enabling site 000-default.
707s Created symlink /etc/systemd/system/multi-user.target.wants/apache2.service → /usr/lib/systemd/system/apache2.service.

708s Created symlink /etc/systemd/system/multi-user.target.wants/apache-htcacheclean.service → /usr/lib/systemd/system/apache-htcacheclean.service.

709s Setting up libbio-coordinate-perl (1.7.1-4) ...
709s Setting up libgd-perl (2.78-1build1) ...
709s Setting up liblwp-protocol-https-perl (6.13-1) ...
709s Setting up libwww-perl (6.76-1) ...
709s Setting up libapache2-mod-perl2 (2.0.13-1build1) ...
710s apache2_invoke: Enable module perl
710s Setting up libbio-db-biofetch-perl (1.7.3-4) ...
710s Setting up libvm-ec2-perl (1.28-4) ...
710s Setting up libapache-dbi-perl (1.12-3) ...
710s Setting up libbio-db-gff-perl (1.7.4-1) ...
710s Setting up libbio-db-seqfeature-perl (1.7.4-2) ...
710s Setting up libbio-graphics-perl (2.40-6) ...
710s Setting up gbrowse (2.56+dfsg-12build1) ...
711s apache2_invoke: Enable configuration gbrowse
711s Setting up gbrowse-calign:arm64 (2.56+dfsg-12build1) ...
711s Setting up autopkgtest-satdep (0) ...
711s Processing triggers for libc-bin (2.39-0ubuntu2) ...
711s Processing triggers for ufw (0.36.2-5) ...
711s Processing triggers for man-db (2.12.0-3) ...
723s (Reading database ... 79961 files and directories currently installed.)
723s Removing autopkgtest-satdep (0) ...
726s autopkgtest [09:06:36]: test autodep8-perl: /usr/share/pkg-perl-autopkgtest/runner runtime-deps
726s autopkgtest [09:06:36]: test autodep8-perl: [-----------------------
727s /usr/share/pkg-perl-autopkgtest/runtime-deps.d/use.t .. skipped: GBrowse.pm or lib/GBrowse.pm not found
727s Files=1, Tests=0,  1 wallclock secs ( 0.02 usr  0.01 sys +  0.11 cusr  0.02 csys =  0.16 CPU)
727s Result: NOTESTS
727s autopkgtest [09:06:37]: test autodep8-perl: -----------------------]
727s autodep8-perl        PASS (superficial)
727s autopkgtest [09:06:37]: test autodep8-perl:  - - - - - - - - - - results - - - - - - - - - -
728s autopkgtest [09:06:38]: test autodep8-perl-recommends: preparing testbed
812s autopkgtest [09:08:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup
813s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
813s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [434 kB]
813s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [2621 kB]
813s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [3976 B]
813s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [37.3 kB]
813s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [581 kB]
813s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
813s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [20.3 kB]
813s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
813s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [2971 kB]
813s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
813s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [39.6 kB]
813s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
815s Fetched 6837 kB in 2s (4234 kB/s)
815s Reading package lists...
818s Reading package lists...
818s Building dependency tree...
818s Reading state information...
818s Calculating upgrade...
819s The following packages will be upgraded:
819s   libsqlite3-0 readline-common
819s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
819s Need to get 760 kB of archives.
819s After this operation, 0 B of additional disk space will be used.
819s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libsqlite3-0 arm64 3.45.1-1ubuntu1 [704 kB]
819s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 readline-common all 8.2-3.1 [56.4 kB]
820s Fetched 760 kB in 1s (1415 kB/s)
820s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74748 files and directories currently installed.)
820s Preparing to unpack .../libsqlite3-0_3.45.1-1ubuntu1_arm64.deb ...
820s Unpacking libsqlite3-0:arm64 (3.45.1-1ubuntu1) over (3.45.1-1) ...
820s Preparing to unpack .../readline-common_8.2-3.1_all.deb ...
820s Unpacking readline-common (8.2-3.1) over (8.2-3) ...
820s Setting up libsqlite3-0:arm64 (3.45.1-1ubuntu1) ...
820s Setting up readline-common (8.2-3.1) ...
820s Processing triggers for man-db (2.12.0-3) ...
820s Processing triggers for install-info (7.1-3) ...
821s Processing triggers for libc-bin (2.39-0ubuntu2) ...
821s Reading package lists...
821s Building dependency tree...
821s Reading state information...
822s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
822s sh: Attempting to set up Debian/Ubuntu apt sources automatically
822s sh: Distribution appears to be Ubuntu
823s Reading package lists...
823s Building dependency tree...
823s Reading state information...
824s eatmydata is already the newest version (131-1).
824s dbus is already the newest version (1.14.10-4ubuntu1).
824s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
824s Reading package lists...
824s Building dependency tree...
824s Reading state information...
825s rng-tools-debian is already the newest version (2.4).
825s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
825s Reading package lists...
825s Building dependency tree...
825s Reading state information...
826s haveged is already the newest version (1.9.14-1ubuntu1).
826s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
826s Reading package lists...
826s Building dependency tree...
826s Reading state information...
826s The following packages will be REMOVED:
826s   cloud-init* python3-configobj* python3-debconf*
827s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
827s After this operation, 3248 kB disk space will be freed.
827s (Reading database ... 
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(Reading database ... 80%
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74748 files and directories currently installed.)
827s Removing cloud-init (24.1-0ubuntu1) ...
827s Removing python3-configobj (5.0.8-3) ...
827s Removing python3-debconf (1.5.86) ...
828s Processing triggers for man-db (2.12.0-3) ...
828s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74359 files and directories currently installed.)
828s Purging configuration files for cloud-init (24.1-0ubuntu1) ...
829s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
829s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
829s Reading package lists...
829s Building dependency tree...
829s Reading state information...
830s linux-generic is already the newest version (6.8.0-11.11+1).
830s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
830s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
831s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
831s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
831s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
832s Reading package lists...
832s Reading package lists...
832s Building dependency tree...
832s Reading state information...
832s Calculating upgrade...
833s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
833s Reading package lists...
833s Building dependency tree...
833s Reading state information...
833s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
833s autopkgtest [09:08:23]: rebooting testbed after setup commands that affected boot
1042s autopkgtest [09:11:52]: testbed dpkg architecture: arm64
1048s Reading package lists...
1048s Building dependency tree...
1048s Reading state information...
1048s Correcting dependencies...Starting pkgProblemResolver with broken count: 0
1049s Starting 2 pkgProblemResolver with broken count: 0
1049s Done
1049s  Done
1049s Starting pkgProblemResolver with broken count: 0
1049s Starting 2 pkgProblemResolver with broken count: 0
1049s Done
1050s The following additional packages will be installed:
1050s   alsa-topology-conf alsa-ucm-conf amap-align apache2 apache2-bin apache2-data
1050s   apache2-utils autodep8 bedtools bioperl bioperl-run blends-common bowtie bwa
1050s   ca-certificates-java clustalo clustalw dctrl-tools default-jdk-headless
1050s   default-jre-headless dialign dialign-tx dialign-tx-data emboss emboss-data
1050s   emboss-lib exonerate fontconfig fontconfig-config fonts-dejavu-core
1050s   fonts-dejavu-mono fonts-droid-fallback fonts-lato fonts-liberation
1050s   fonts-liberation-sans-narrow fonts-liberation2 fonts-noto-mono
1050s   fonts-urw-base35 fsa gbrowse gbrowse-calign gbrowse-data ghostscript
1050s   graphviz hmmer hyphy-common hyphy-pt infernal java-common javascript-common
1050s   kalign lagan libace-perl libalgorithm-diff-perl libalgorithm-diff-xs-perl
1050s   libalgorithm-munkres-perl libamd-comgr2 libamdhip64-5 libann0
1050s   libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl
1050s   libapache-dbi-perl libapache2-mod-perl2 libapache2-reload-perl libapr1
1050s   libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libargtable2-0
1050s   libarray-compare-perl libasound2 libasound2-data libasync-interrupt-perl
1050s   libatomic1 libauthen-sasl-perl libavahi-client3 libavahi-common-data
1050s   libavahi-common3 libb-hooks-endofscope-perl libb-hooks-op-check-perl
1050s   libberkeleydb-perl libbio-asn1-entrezgene-perl libbio-cluster-perl
1050s   libbio-coordinate-perl libbio-db-biofetch-perl libbio-db-gff-perl
1050s   libbio-db-seqfeature-perl libbio-eutilities-perl libbio-featureio-perl
1050s   libbio-graphics-perl libbio-perl-perl libbio-perl-run-perl libbio-scf-perl
1050s   libbio-tools-run-alignment-clustalw-perl libbio-tools-run-remoteblast-perl
1050s   libbio-variation-perl libbit-vector-perl libbsd-resource-perl
1050s   libcache-cache-perl libcairo2 libcapture-tiny-perl libcarp-clan-perl libcdt5
1050s   libcgi-fast-perl libcgi-pm-perl libcgi-session-perl libcgraph6
1050s   libclass-data-inheritable-perl libclass-inspector-perl
1050s   libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl
1050s   libcommon-sense-perl libconvert-binary-c-perl libconvert-binhex-perl
1050s   libcrypt-rc4-perl libcups2 libdata-dump-perl libdata-stag-perl
1050s   libdate-calc-perl libdate-calc-xs-perl libdate-manip-perl libdatrie1
1050s   libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdeflate0
1050s   libdevel-callchecker-perl libdevel-stacktrace-perl libdevel-symdump-perl
1050s   libdigest-perl-md5-perl libdivsufsort3 libdrm-amdgpu1
1050s   libdynaloader-functions-perl libencode-locale-perl libencode-perl
1050s   liberror-perl libev-perl libevent-pthreads-2.1-7 libexception-class-perl
1050s   libexporter-tiny-perl libfabric1 libfcgi-bin libfcgi-perl libfcgi0ldbl
1050s   libfile-listing-perl libfile-slurp-tiny-perl libfile-sort-perl
1050s   libfont-afm-perl libfontconfig1 libfontenc1 libfreezethaw-perl libgd-perl
1050s   libgd-svg-perl libgd3 libgfortran5 libgomp1 libgraph-perl libgraphite2-3
1050s   libgraphviz-perl libgs-common libgs10 libgs10-common libgts-0.7-5 libgts-bin
1050s   libguard-perl libgvc6 libgvpr2 libharfbuzz0b libheap-perl libhpdf-2.3.0
1050s   libhsa-runtime64-1 libhsakmt1 libhtml-form-perl libhtml-format-perl
1050s   libhtml-parser-perl libhtml-tableextract-perl libhtml-tagset-perl
1050s   libhtml-tree-perl libhts3 libhtscodecs2 libhttp-cookies-perl
1050s   libhttp-daemon-perl libhttp-date-perl libhttp-message-perl
1050s   libhttp-negotiate-perl libhwloc-plugins libhwloc15 libice6 libidn12
1050s   libijs-0.35 libimport-into-perl libio-html-perl libio-pty-perl
1050s   libio-sessiondata-perl libio-socket-ssl-perl libio-string-perl
1050s   libio-stringy-perl libipc-run-perl libipc-sharelite-perl libjbig0
1050s   libjbig2dec0 libjcode-pm-perl libjpeg-turbo8 libjpeg8 libjs-jquery
1050s   libjs-prototype libjs-scriptaculous libjson-perl libjson-xs-perl
1050s   liblab-gamut1 liblcms2-2 liblerc4 liblist-moreutils-perl
1050s   liblist-moreutils-xs-perl libllvm17 libltdl7 liblua5.4-0
1050s   liblwp-mediatypes-perl liblwp-protocol-https-perl libmailtools-perl
1050s   libmath-derivative-perl libmath-spline-perl libmbedcrypto7 libmbedtls14
1050s   libmbedx509-1 libmime-tools-perl libmldbm-perl libmodule-implementation-perl
1050s   libmodule-runtime-perl libmoo-perl libmunge2 libmysqlclient21
1050s   libnamespace-clean-perl libnet-http-perl libnet-smtp-ssl-perl
1050s   libnet-ssleay-perl libole-storage-lite-perl libopenjp2-7 libopenmpi3
1050s   libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0
1050s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
1050s   libparams-classify-perl libparse-recdescent-perl libpathplan4 libpciaccess0
1050s   libpcsclite1 libpixman-1-0 libpmix2 libpostscript-perl libpq5 librdmacm1t64
1050s   libreadline8t64 libreadonly-perl libref-util-perl libref-util-xs-perl
1050s   librole-tiny-perl libruby libruby3.1 libset-object-perl libset-scalar-perl
1050s   libsharpyuv0 libsm6 libsoap-lite-perl libsort-naturally-perl
1050s   libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl
1050s   libstaden-read14 libstatistics-descriptive-perl libstring-approx-perl
1050s   libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl
1050s   libsub-quote-perl libsub-uplevel-perl libsvg-graph-perl libsvg-perl
1050s   libtask-weaken-perl libterm-readkey-perl libtest-deep-perl
1050s   libtest-differences-perl libtest-exception-perl libtest-most-perl
1050s   libtest-requiresinternet-perl libtest-warn-perl libtext-csv-perl
1050s   libtext-csv-xs-perl libtext-diff-perl libthai-data libthai0
1050s   libtie-ixhash-perl libtiff6 libtimedate-perl libtree-dagnode-perl
1050s   libtry-tiny-perl libtype-tiny-perl libtype-tiny-xs-perl
1050s   libtypes-serialiser-perl libucx0 libunicode-map-perl liburi-perl
1050s   libvariable-magic-perl libvm-ec2-perl libwebp7 libwww-perl
1050s   libwww-robotrules-perl libxaw7 libxcb-render0 libxcb-shm0 libxft2
1050s   libxml-dom-perl libxml-dom-xpath-perl libxml-filter-buffertext-perl
1050s   libxml-libxml-perl libxml-libxslt-perl libxml-namespacesupport-perl
1050s   libxml-parser-perl libxml-perl libxml-regexp-perl libxml-sax-base-perl
1050s   libxml-sax-expat-perl libxml-sax-perl libxml-sax-writer-perl
1050s   libxml-simple-perl libxml-twig-perl libxml-writer-perl libxml-xpath-perl
1050s   libxml-xpathengine-perl libxmlrpc-lite-perl libxmu6 libxnvctrl0 libxpm4
1050s   libxrender1 libxslt1.1 libxt6 libyaml-libyaml-perl libyaml-perl lynx
1050s   lynx-common mafft mailcap maq med-config menu mummer muscle mustang
1050s   mysql-common ncbi-blast+ ncbi-blast+-legacy ncbi-data ncoils
1050s   ocl-icd-libopencl1 openjdk-21-jdk-headless openjdk-21-jre-headless
1050s   openmpi-bin openmpi-common pal2nal paml perl-doc perl-openssl-defaults
1050s   perl-tk phylip phyml pkg-perl-autopkgtest poa poppler-data prank primer3
1050s   probalign probcons proda rake raxml ruby ruby-net-telnet ruby-rubygems
1050s   ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration samtools
1050s   sim4 sqlite3 ssl-cert t-coffee tigr-glimmer tm-align unzip wise wise-data
1050s   x11-common xfonts-encodings xfonts-utils zip
1050s Suggested packages:
1050s   apache2-doc apache2-suexec-pristine | apache2-suexec-custom gmap fasta3
1050s   trnascan-se blends-doc bowtie-examples clustalx seaview debtags default-jre
1050s   emboss-doc emboss-test embassy fonts-noto fonts-freefont-otf
1050s   | fonts-freefont-ttf fonts-texgyre libfile-nfslock-perl gsfonts graphviz-doc
1050s   hmmer-doc libevent-perl libio-async-perl libpoe-perl libasound2-plugins
1050s   alsa-utils libdigest-hmac-perl libgssapi-perl libxml-sax-expatxs-perl
1050s   cups-common libnet-daemon-perl libsql-statement-perl libgd-tools
1050s   libhtml-element-extended-perl libio-compress-brotli-perl liblcms2-utils
1050s   libcrypt-ssleay-perl libscalar-number-perl pcscd libmime-lite-perl
1050s   libnet-jabber-perl libxstring-perl libdevel-lexalias-perl
1050s   libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl
1050s   libunicode-map8-perl libunicode-string-perl xml-twig-tools
1050s   libyaml-shell-perl menu-l10n gksu | kde-cli-tools | ktsuss mustang-testdata
1050s   gnuplot opencl-icd openjdk-21-demo openjdk-21-source libnss-mdns
1050s   fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho
1050s   fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic gfortran
1050s   | fortran-compiler debhelper phylip-doc blast2 poppler-utils
1050s   fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic
1050s   | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum
1050s   ncbi-epcr probcons-extra ri ruby-dev bundler cwltool sqlite3-doc boxshade
1050s   t-coffee-examples pymol rasmol wise-doc
1050s Recommended packages:
1050s   pftools blast2
1050s The following packages will be REMOVED:
1050s   libreadline8
1050s The following NEW packages will be installed:
1050s   alsa-topology-conf alsa-ucm-conf amap-align apache2 apache2-bin apache2-data
1050s   apache2-utils autodep8 bedtools bioperl bioperl-run blends-common bowtie bwa
1050s   ca-certificates-java clustalo clustalw dctrl-tools default-jdk-headless
1050s   default-jre-headless dialign dialign-tx dialign-tx-data emboss emboss-data
1050s   emboss-lib exonerate fontconfig fontconfig-config fonts-dejavu-core
1050s   fonts-dejavu-mono fonts-droid-fallback fonts-lato fonts-liberation
1050s   fonts-liberation-sans-narrow fonts-liberation2 fonts-noto-mono
1050s   fonts-urw-base35 fsa gbrowse gbrowse-calign gbrowse-data ghostscript
1050s   graphviz hmmer hyphy-common hyphy-pt infernal java-common javascript-common
1050s   kalign lagan libace-perl libalgorithm-diff-perl libalgorithm-diff-xs-perl
1050s   libalgorithm-munkres-perl libamd-comgr2 libamdhip64-5 libann0
1050s   libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl
1050s   libapache-dbi-perl libapache2-mod-perl2 libapache2-reload-perl libapr1
1050s   libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libargtable2-0
1050s   libarray-compare-perl libasound2 libasound2-data libasync-interrupt-perl
1050s   libatomic1 libauthen-sasl-perl libavahi-client3 libavahi-common-data
1050s   libavahi-common3 libb-hooks-endofscope-perl libb-hooks-op-check-perl
1050s   libberkeleydb-perl libbio-asn1-entrezgene-perl libbio-cluster-perl
1050s   libbio-coordinate-perl libbio-db-biofetch-perl libbio-db-gff-perl
1050s   libbio-db-seqfeature-perl libbio-eutilities-perl libbio-featureio-perl
1050s   libbio-graphics-perl libbio-perl-perl libbio-perl-run-perl libbio-scf-perl
1050s   libbio-tools-run-alignment-clustalw-perl libbio-tools-run-remoteblast-perl
1050s   libbio-variation-perl libbit-vector-perl libbsd-resource-perl
1050s   libcache-cache-perl libcairo2 libcapture-tiny-perl libcarp-clan-perl libcdt5
1050s   libcgi-fast-perl libcgi-pm-perl libcgi-session-perl libcgraph6
1050s   libclass-data-inheritable-perl libclass-inspector-perl
1050s   libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl
1050s   libcommon-sense-perl libconvert-binary-c-perl libconvert-binhex-perl
1050s   libcrypt-rc4-perl libcups2 libdata-dump-perl libdata-stag-perl
1050s   libdate-calc-perl libdate-calc-xs-perl libdate-manip-perl libdatrie1
1050s   libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdeflate0
1050s   libdevel-callchecker-perl libdevel-stacktrace-perl libdevel-symdump-perl
1050s   libdigest-perl-md5-perl libdivsufsort3 libdrm-amdgpu1
1050s   libdynaloader-functions-perl libencode-locale-perl libencode-perl
1050s   liberror-perl libev-perl libevent-pthreads-2.1-7 libexception-class-perl
1050s   libexporter-tiny-perl libfabric1 libfcgi-bin libfcgi-perl libfcgi0ldbl
1050s   libfile-listing-perl libfile-slurp-tiny-perl libfile-sort-perl
1050s   libfont-afm-perl libfontconfig1 libfontenc1 libfreezethaw-perl libgd-perl
1050s   libgd-svg-perl libgd3 libgfortran5 libgomp1 libgraph-perl libgraphite2-3
1050s   libgraphviz-perl libgs-common libgs10 libgs10-common libgts-0.7-5 libgts-bin
1050s   libguard-perl libgvc6 libgvpr2 libharfbuzz0b libheap-perl libhpdf-2.3.0
1050s   libhsa-runtime64-1 libhsakmt1 libhtml-form-perl libhtml-format-perl
1050s   libhtml-parser-perl libhtml-tableextract-perl libhtml-tagset-perl
1050s   libhtml-tree-perl libhts3 libhtscodecs2 libhttp-cookies-perl
1050s   libhttp-daemon-perl libhttp-date-perl libhttp-message-perl
1050s   libhttp-negotiate-perl libhwloc-plugins libhwloc15 libice6 libidn12
1050s   libijs-0.35 libimport-into-perl libio-html-perl libio-pty-perl
1050s   libio-sessiondata-perl libio-socket-ssl-perl libio-string-perl
1050s   libio-stringy-perl libipc-run-perl libipc-sharelite-perl libjbig0
1050s   libjbig2dec0 libjcode-pm-perl libjpeg-turbo8 libjpeg8 libjs-jquery
1050s   libjs-prototype libjs-scriptaculous libjson-perl libjson-xs-perl
1050s   liblab-gamut1 liblcms2-2 liblerc4 liblist-moreutils-perl
1050s   liblist-moreutils-xs-perl libllvm17 libltdl7 liblua5.4-0
1050s   liblwp-mediatypes-perl liblwp-protocol-https-perl libmailtools-perl
1050s   libmath-derivative-perl libmath-spline-perl libmbedcrypto7 libmbedtls14
1050s   libmbedx509-1 libmime-tools-perl libmldbm-perl libmodule-implementation-perl
1050s   libmodule-runtime-perl libmoo-perl libmunge2 libmysqlclient21
1050s   libnamespace-clean-perl libnet-http-perl libnet-smtp-ssl-perl
1050s   libnet-ssleay-perl libole-storage-lite-perl libopenjp2-7 libopenmpi3
1050s   libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0
1050s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
1050s   libparams-classify-perl libparse-recdescent-perl libpathplan4 libpciaccess0
1050s   libpcsclite1 libpixman-1-0 libpmix2 libpostscript-perl libpq5 librdmacm1t64
1050s   libreadline8t64 libreadonly-perl libref-util-perl libref-util-xs-perl
1050s   librole-tiny-perl libruby libruby3.1 libset-object-perl libset-scalar-perl
1050s   libsharpyuv0 libsm6 libsoap-lite-perl libsort-naturally-perl
1050s   libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl
1050s   libstaden-read14 libstatistics-descriptive-perl libstring-approx-perl
1050s   libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl
1050s   libsub-quote-perl libsub-uplevel-perl libsvg-graph-perl libsvg-perl
1050s   libtask-weaken-perl libterm-readkey-perl libtest-deep-perl
1050s   libtest-differences-perl libtest-exception-perl libtest-most-perl
1050s   libtest-requiresinternet-perl libtest-warn-perl libtext-csv-perl
1050s   libtext-csv-xs-perl libtext-diff-perl libthai-data libthai0
1050s   libtie-ixhash-perl libtiff6 libtimedate-perl libtree-dagnode-perl
1050s   libtry-tiny-perl libtype-tiny-perl libtype-tiny-xs-perl
1050s   libtypes-serialiser-perl libucx0 libunicode-map-perl liburi-perl
1050s   libvariable-magic-perl libvm-ec2-perl libwebp7 libwww-perl
1050s   libwww-robotrules-perl libxaw7 libxcb-render0 libxcb-shm0 libxft2
1050s   libxml-dom-perl libxml-dom-xpath-perl libxml-filter-buffertext-perl
1050s   libxml-libxml-perl libxml-libxslt-perl libxml-namespacesupport-perl
1050s   libxml-parser-perl libxml-perl libxml-regexp-perl libxml-sax-base-perl
1050s   libxml-sax-expat-perl libxml-sax-perl libxml-sax-writer-perl
1050s   libxml-simple-perl libxml-twig-perl libxml-writer-perl libxml-xpath-perl
1050s   libxml-xpathengine-perl libxmlrpc-lite-perl libxmu6 libxnvctrl0 libxpm4
1050s   libxrender1 libxslt1.1 libxt6 libyaml-libyaml-perl libyaml-perl lynx
1050s   lynx-common mafft mailcap maq med-config menu mummer muscle mustang
1050s   mysql-common ncbi-blast+ ncbi-blast+-legacy ncbi-data ncoils
1050s   ocl-icd-libopencl1 openjdk-21-jdk-headless openjdk-21-jre-headless
1050s   openmpi-bin openmpi-common pal2nal paml perl-doc perl-openssl-defaults
1050s   perl-tk phylip phyml pkg-perl-autopkgtest poa poppler-data prank primer3
1050s   probalign probcons proda rake raxml ruby ruby-net-telnet ruby-rubygems
1050s   ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration samtools
1050s   sim4 sqlite3 ssl-cert t-coffee tigr-glimmer tm-align unzip wise wise-data
1050s   x11-common xfonts-encodings xfonts-utils zip
1050s 0 upgraded, 403 newly installed, 1 to remove and 0 not upgraded.
1050s 1 not fully installed or removed.
1050s Need to get 366 MB of archives.
1050s After this operation, 1520 MB of additional disk space will be used.
1050s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 libapr1 arm64 1.7.2-3 [103 kB]
1051s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1 arm64 1.6.3-1ubuntu1 [91.7 kB]
1051s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1-dbd-sqlite3 arm64 1.6.3-1ubuntu1 [11.0 kB]
1051s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 libaprutil1-ldap arm64 1.6.3-1ubuntu1 [8972 B]
1051s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 liblua5.4-0 arm64 5.4.6-3 [158 kB]
1051s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-bin arm64 2.4.58-1ubuntu2 [1316 kB]
1051s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-data all 2.4.58-1ubuntu2 [163 kB]
1051s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 apache2-utils arm64 2.4.58-1ubuntu2 [94.9 kB]
1051s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 apache2 arm64 2.4.58-1ubuntu2 [90.2 kB]
1051s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libio-string-perl all 1.08-4 [11.1 kB]
1051s Get:11 http://ftpmaster.internal/ubuntu noble/universe arm64 libdata-stag-perl all 0.14-3 [372 kB]
1051s Get:12 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-perl-perl all 1.7.8-1 [2580 kB]
1051s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libclass-data-inheritable-perl all 0.08-3 [8084 B]
1051s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 libdevel-stacktrace-perl all 2.0500-1 [22.1 kB]
1051s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 libexception-class-perl all 1.45-1 [28.6 kB]
1051s Get:16 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-deep-perl all 1.204-1 [47.1 kB]
1051s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libcapture-tiny-perl all 0.48-2 [20.2 kB]
1051s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libalgorithm-diff-perl all 1.201-1 [41.8 kB]
1051s Get:19 http://ftpmaster.internal/ubuntu noble/universe arm64 libtext-diff-perl all 1.45-2 [25.6 kB]
1051s Get:20 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-differences-perl all 0.71-1 [15.8 kB]
1051s Get:21 http://ftpmaster.internal/ubuntu noble/universe arm64 libsub-uplevel-perl all 0.2800-3 [11.6 kB]
1051s Get:22 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-exception-perl all 0.43-3 [13.4 kB]
1051s Get:23 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-warn-perl all 0.37-2 [12.6 kB]
1051s Get:24 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-most-perl all 0.38-1 [21.5 kB]
1051s Get:25 http://ftpmaster.internal/ubuntu noble/universe arm64 bioperl all 1.7.8-1 [216 kB]
1051s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
1051s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
1051s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-liberation all 1:2.1.5-3 [1603 kB]
1051s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libfontenc1 arm64 1:1.1.4-1build3 [14.1 kB]
1051s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
1051s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB]
1051s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-utils arm64 1:7.7+6build2 [93.6 kB]
1051s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-urw-base35 all 20200910-8 [11.0 MB]
1052s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB]
1052s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB]
1052s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB]
1052s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
1052s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB]
1052s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB]
1052s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB]
1052s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB]
1052s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB]
1052s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB]
1052s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libxpm4 arm64 1:3.5.17-1 [34.5 kB]
1052s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libgd3 arm64 2.3.3-9ubuntu1 [119 kB]
1052s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 libgd-perl arm64 2.78-1build1 [125 kB]
1052s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libdevel-symdump-perl all 2.18-5 [12.6 kB]
1052s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 liburi-perl all 5.27-1 [88.0 kB]
1052s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libencode-locale-perl all 1.05-3 [11.6 kB]
1052s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libtimedate-perl all 2.3300-2 [34.0 kB]
1052s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-date-perl all 6.06-1 [10.2 kB]
1052s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 libfile-listing-perl all 6.16-1 [11.3 kB]
1052s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-tagset-perl all 3.20-6 [11.3 kB]
1052s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-parser-perl arm64 3.81-1build1 [84.8 kB]
1052s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-tree-perl all 5.07-3 [200 kB]
1052s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libclone-perl arm64 0.46-1build1 [10.4 kB]
1052s Get:57 http://ftpmaster.internal/ubuntu noble/universe arm64 libencode-perl arm64 3.21-1 [1707 kB]
1052s Get:58 http://ftpmaster.internal/ubuntu noble/main arm64 libio-html-perl all 1.004-3 [15.9 kB]
1052s Get:59 http://ftpmaster.internal/ubuntu noble/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.1 kB]
1052s Get:60 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-message-perl all 6.45-1ubuntu1 [78.2 kB]
1052s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-cookies-perl all 6.11-1 [18.2 kB]
1052s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-negotiate-perl all 6.01-2 [12.4 kB]
1052s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 perl-openssl-defaults arm64 7 [7536 B]
1052s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libnet-ssleay-perl arm64 1.94-1 [311 kB]
1052s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 libio-socket-ssl-perl all 2.085-1 [195 kB]
1052s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 libnet-http-perl all 6.23-1 [22.3 kB]
1052s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 liblwp-protocol-https-perl all 6.13-1 [9006 B]
1052s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libtry-tiny-perl all 0.31-2 [20.8 kB]
1052s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libwww-robotrules-perl all 6.02-1 [12.6 kB]
1052s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libwww-perl all 6.76-1 [138 kB]
1052s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 libapache2-mod-perl2 arm64 2.0.13-1build1 [777 kB]
1052s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libdbi-perl arm64 1.643-4build1 [718 kB]
1052s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 libapache-dbi-perl all 1.12-3 [40.5 kB]
1052s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-db-biofetch-perl all 1.7.3-4 [17.1 kB]
1052s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libcgi-pm-perl all 4.61-1 [185 kB]
1052s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-db-gff-perl all 1.7.4-1 [273 kB]
1052s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 libpq5 arm64 16.2-1 [136 kB]
1052s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 libdbd-pg-perl arm64 3.18.0-1build1 [191 kB]
1052s Get:79 http://ftpmaster.internal/ubuntu noble/universe arm64 libdbd-sqlite3-perl arm64 1.74-1build1 [159 kB]
1052s Get:80 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-db-seqfeature-perl all 1.7.4-2 [169 kB]
1052s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-graphics-perl all 2.40-6 [601 kB]
1052s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-coordinate-perl all 1.7.1-4 [56.4 kB]
1052s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 libcgi-session-perl all 4.48-4 [108 kB]
1052s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libjson-perl all 4.10000-1 [81.9 kB]
1052s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libexporter-tiny-perl all 1.006002-1 [36.8 kB]
1052s Get:86 http://ftpmaster.internal/ubuntu noble/universe arm64 liblist-moreutils-xs-perl arm64 0.430-3build3 [40.9 kB]
1052s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 liblist-moreutils-perl all 0.430-2 [38.2 kB]
1052s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 libstatistics-descriptive-perl all 3.0801-1 [58.7 kB]
1052s Get:89 http://ftpmaster.internal/ubuntu noble/main arm64 libhttp-daemon-perl all 6.16-1 [22.4 kB]
1052s Get:90 http://ftpmaster.internal/ubuntu noble/main arm64 libterm-readkey-perl arm64 2.38-2build2 [23.1 kB]
1052s Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libreadline8t64 arm64 8.2-3.1 [153 kB]
1052s Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 sqlite3 arm64 3.45.1-1ubuntu1 [140 kB]
1052s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-prototype all 1.7.3-1 [44.8 kB]
1052s Get:94 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-scriptaculous all 1.9.0-3 [92.6 kB]
1052s Get:95 http://ftpmaster.internal/ubuntu noble/universe arm64 libanyevent-perl arm64 7.170-2build4 [368 kB]
1052s Get:96 http://ftpmaster.internal/ubuntu noble/universe arm64 libanyevent-cachedns-perl all 0.08-3 [7216 B]
1052s Get:97 http://ftpmaster.internal/ubuntu noble/main arm64 libcommon-sense-perl arm64 3.75-3build1 [20.3 kB]
1052s Get:98 http://ftpmaster.internal/ubuntu noble/universe arm64 libanyevent-http-perl all 2.25-2 [30.3 kB]
1052s Get:99 http://ftpmaster.internal/ubuntu noble/universe arm64 libstring-approx-perl arm64 3.28-2build2 [34.7 kB]
1052s Get:100 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-namespacesupport-perl all 1.12-2 [13.5 kB]
1052s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-sax-base-perl all 1.09-3 [18.9 kB]
1052s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-sax-perl all 1.02+dfsg-3 [57.0 kB]
1053s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1build2 [296 kB]
1053s Get:104 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-parser-perl arm64 2.47-1build1 [202 kB]
1053s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-sax-expat-perl all 0.51-2 [8644 B]
1053s Get:106 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-simple-perl all 2.25-2 [64.1 kB]
1053s Get:107 http://ftpmaster.internal/ubuntu noble/universe arm64 libvm-ec2-perl all 1.28-4 [766 kB]
1053s Get:108 http://ftpmaster.internal/ubuntu noble/universe arm64 gbrowse all 2.56+dfsg-12build1 [2181 kB]
1053s Get:109 http://ftpmaster.internal/ubuntu noble/universe arm64 gbrowse-data all 2.56+dfsg-12build1 [1226 kB]
1053s Get:110 http://ftpmaster.internal/ubuntu noble/universe arm64 gbrowse-calign arm64 2.56+dfsg-12build1 [14.7 kB]
1053s Get:111 http://ftpmaster.internal/ubuntu noble/main arm64 dctrl-tools arm64 2.24-3build2 [65.2 kB]
1053s Get:112 http://ftpmaster.internal/ubuntu noble/main arm64 autodep8 all 0.28 [13.2 kB]
1053s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 pkg-perl-autopkgtest all 0.77 [18.0 kB]
1053s Get:114 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-droid-fallback all 1:6.0.1r16-1.1build1 [1805 kB]
1053s Get:115 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-lato all 2.015-1 [2781 kB]
1053s Get:116 http://ftpmaster.internal/ubuntu noble/main arm64 poppler-data all 0.4.12-1 [2060 kB]
1053s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 alsa-topology-conf all 1.2.5.1-2 [15.5 kB]
1053s Get:118 http://ftpmaster.internal/ubuntu noble/main arm64 libasound2-data all 1.2.10-3build1 [20.7 kB]
1053s Get:119 http://ftpmaster.internal/ubuntu noble/main arm64 libasound2 arm64 1.2.10-3build1 [386 kB]
1053s Get:120 http://ftpmaster.internal/ubuntu noble/main arm64 alsa-ucm-conf all 1.2.10-1ubuntu3 [63.1 kB]
1053s Get:121 http://ftpmaster.internal/ubuntu noble/universe arm64 amap-align arm64 2.2+git20080214.600fc29+dfsg-2 [124 kB]
1053s Get:122 http://ftpmaster.internal/ubuntu noble/universe arm64 bedtools arm64 2.31.1+dfsg-2 [636 kB]
1053s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 libio-pty-perl arm64 1:1.20-1 [31.0 kB]
1053s Get:124 http://ftpmaster.internal/ubuntu noble/main arm64 libipc-run-perl all 20231003.0-1 [92.1 kB]
1053s Get:125 http://ftpmaster.internal/ubuntu noble/universe arm64 libfile-sort-perl all 1.01-3 [21.5 kB]
1053s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-perl-run-perl all 1.7.3-9 [606 kB]
1053s Get:127 http://ftpmaster.internal/ubuntu noble/universe arm64 clustalw arm64 2.1+lgpl-7 [240 kB]
1053s Get:128 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-tools-run-alignment-clustalw-perl all 1.7.4-3 [24.4 kB]
1053s Get:129 http://ftpmaster.internal/ubuntu noble/universe arm64 libfile-slurp-tiny-perl all 0.004-2 [6906 B]
1053s Get:130 http://ftpmaster.internal/ubuntu noble/universe arm64 libtree-dagnode-perl all 1.32-1 [54.8 kB]
1053s Get:131 http://ftpmaster.internal/ubuntu noble/universe arm64 libxml-perl all 0.08-4 [90.5 kB]
1053s Get:132 http://ftpmaster.internal/ubuntu noble/universe arm64 libxml-regexp-perl all 0.04-1.1 [7208 B]
1053s Get:133 http://ftpmaster.internal/ubuntu noble/universe arm64 libxml-dom-perl all 1.46-2 [143 kB]
1053s Get:134 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-xpathengine-perl all 0.14-2 [32.6 kB]
1053s Get:135 http://ftpmaster.internal/ubuntu noble/universe arm64 libxml-dom-xpath-perl all 0.14-4 [8338 B]
1053s Get:136 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-featureio-perl all 1.6.905-2 [52.8 kB]
1053s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libxml-twig-perl all 1:3.52-2 [158 kB]
1054s Get:138 http://ftpmaster.internal/ubuntu noble/universe arm64 libxml-writer-perl all 0.900-2 [24.0 kB]
1054s Get:139 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-variation-perl all 1.7.5-3 [73.4 kB]
1054s Get:140 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-cluster-perl all 1.7.3-6 [53.7 kB]
1054s Get:141 http://ftpmaster.internal/ubuntu noble/universe arm64 libtest-requiresinternet-perl all 0.05-4 [5942 B]
1054s Get:142 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-asn1-entrezgene-perl all 1.730-3 [45.0 kB]
1054s Get:143 http://ftpmaster.internal/ubuntu noble/universe arm64 libtext-csv-perl all 2.04-1 [109 kB]
1054s Get:144 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-eutilities-perl all 1.77-2 [123 kB]
1054s Get:145 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-tools-run-remoteblast-perl all 1.7.3-3 [17.3 kB]
1054s Get:146 http://ftpmaster.internal/ubuntu noble/universe arm64 libclass-inspector-perl all 1.36-3 [15.4 kB]
1054s Get:147 http://ftpmaster.internal/ubuntu noble/main arm64 libfcgi0ldbl arm64 2.4.2-2build2 [28.0 kB]
1054s Get:148 http://ftpmaster.internal/ubuntu noble/main arm64 libfcgi-perl arm64 0.82+ds-2build1 [20.6 kB]
1054s Get:149 http://ftpmaster.internal/ubuntu noble/universe arm64 libio-sessiondata-perl all 1.03-3 [6132 B]
1054s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 libio-stringy-perl all 2.111-3 [55.8 kB]
1054s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 libconvert-binhex-perl all 1.125-3 [27.1 kB]
1054s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 libnet-smtp-ssl-perl all 1.04-2 [6218 B]
1054s Get:153 http://ftpmaster.internal/ubuntu noble/main arm64 libmailtools-perl all 2.21-2 [80.4 kB]
1054s Get:154 http://ftpmaster.internal/ubuntu noble/main arm64 libmime-tools-perl all 5.514-1 [187 kB]
1054s Get:155 http://ftpmaster.internal/ubuntu noble/universe arm64 libtask-weaken-perl all 1.06-2 [7924 B]
1054s Get:156 http://ftpmaster.internal/ubuntu noble/universe arm64 libsoap-lite-perl all 1.27-3 [225 kB]
1054s Get:157 http://ftpmaster.internal/ubuntu noble/main arm64 ca-certificates-java all 20240118 [11.6 kB]
1054s Get:158 http://ftpmaster.internal/ubuntu noble/main arm64 java-common all 0.75+exp1 [6798 B]
1054s Get:159 http://ftpmaster.internal/ubuntu noble/main arm64 libavahi-common-data arm64 0.8-13ubuntu2 [29.5 kB]
1054s Get:160 http://ftpmaster.internal/ubuntu noble/main arm64 libavahi-common3 arm64 0.8-13ubuntu2 [23.2 kB]
1054s Get:161 http://ftpmaster.internal/ubuntu noble/main arm64 libavahi-client3 arm64 0.8-13ubuntu2 [27.3 kB]
1054s Get:162 http://ftpmaster.internal/ubuntu noble/main arm64 libcups2 arm64 2.4.6-0ubuntu3 [270 kB]
1054s Get:163 http://ftpmaster.internal/ubuntu noble/main arm64 liblcms2-2 arm64 2.14-2 [159 kB]
1054s Get:164 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB]
1054s Get:165 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB]
1054s Get:166 http://ftpmaster.internal/ubuntu noble/main arm64 libpcsclite1 arm64 2.0.0-1 [21.2 kB]
1054s Get:167 http://ftpmaster.internal/ubuntu noble/main arm64 openjdk-21-jre-headless arm64 21.0.2+13-2 [45.8 MB]
1056s Get:168 http://ftpmaster.internal/ubuntu noble/main arm64 default-jre-headless arm64 2:1.21-75+exp1 [3096 B]
1056s Get:169 http://ftpmaster.internal/ubuntu noble/main arm64 openjdk-21-jdk-headless arm64 21.0.2+13-2 [81.6 MB]
1058s Get:170 http://ftpmaster.internal/ubuntu noble/main arm64 default-jdk-headless arm64 2:1.21-75+exp1 [960 B]
1058s Get:171 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB]
1058s Get:172 http://ftpmaster.internal/ubuntu noble/universe arm64 hyphy-common all 2.5.59+dfsg-1 [624 kB]
1058s Get:173 http://ftpmaster.internal/ubuntu noble/universe arm64 hyphy-pt arm64 2.5.59+dfsg-1 [1162 kB]
1058s Get:174 http://ftpmaster.internal/ubuntu noble/universe arm64 bioperl-run all 1.7.3-9 [35.5 kB]
1058s Get:175 http://ftpmaster.internal/ubuntu noble/universe arm64 menu arm64 2.1.50 [366 kB]
1058s Get:176 http://ftpmaster.internal/ubuntu noble/universe arm64 blends-common all 0.7.6 [15.2 kB]
1058s Get:177 http://ftpmaster.internal/ubuntu noble/universe arm64 bwa arm64 0.7.17-7 [192 kB]
1058s Get:178 http://ftpmaster.internal/ubuntu noble/universe arm64 libargtable2-0 arm64 13-1.1 [13.4 kB]
1058s Get:179 http://ftpmaster.internal/ubuntu noble/universe arm64 clustalo arm64 1.2.4-8 [189 kB]
1058s Get:180 http://ftpmaster.internal/ubuntu noble/universe arm64 dialign arm64 2.2.1-11 [138 kB]
1059s Get:181 http://ftpmaster.internal/ubuntu noble/universe arm64 dialign-tx-data all 1.0.2-14 [1022 kB]
1059s Get:182 http://ftpmaster.internal/ubuntu noble/universe arm64 dialign-tx arm64 1.0.2-14 [84.2 kB]
1059s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 libhpdf-2.3.0 arm64 2.3.0+dfsg-1build1 [344 kB]
1059s Get:184 http://ftpmaster.internal/ubuntu noble/main arm64 mysql-common all 5.8+1.1.0 [6626 B]
1059s Get:185 http://ftpmaster.internal/ubuntu noble/main arm64 libmysqlclient21 arm64 8.0.36-1 [1271 kB]
1059s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 emboss-lib arm64 6.6.0+dfsg-12ubuntu1 [2838 kB]
1059s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 emboss-data all 6.6.0+dfsg-12ubuntu1 [61.0 MB]
1061s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 emboss arm64 6.6.0+dfsg-12ubuntu1 [936 kB]
1061s Get:189 http://ftpmaster.internal/ubuntu noble/universe arm64 exonerate arm64 2.4.0-5 [1424 kB]
1061s Get:190 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.15.0-1ubuntu1 [190 kB]
1061s Get:191 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-liberation-sans-narrow all 1:1.07.6-4 [197 kB]
1061s Get:192 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-liberation2 all 1:2.1.5-3 [3418 B]
1061s Get:193 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-noto-mono all 20201225-2 [435 kB]
1061s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 mummer arm64 3.23+dfsg-8 [673 kB]
1061s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 fsa arm64 1.15.9+dfsg-6 [597 kB]
1061s Get:196 http://ftpmaster.internal/ubuntu noble/main arm64 libgs-common all 10.02.1~dfsg1-0ubuntu2 [174 kB]
1061s Get:197 http://ftpmaster.internal/ubuntu noble/main arm64 libgs10-common all 10.02.1~dfsg1-0ubuntu2 [488 kB]
1061s Get:198 http://ftpmaster.internal/ubuntu noble/main arm64 libidn12 arm64 1.42-1 [56.8 kB]
1061s Get:199 http://ftpmaster.internal/ubuntu noble/main arm64 libijs-0.35 arm64 0.35-15.1 [15.1 kB]
1061s Get:200 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig2dec0 arm64 0.20-1 [62.8 kB]
1061s Get:201 http://ftpmaster.internal/ubuntu noble/main arm64 libopenjp2-7 arm64 2.5.0-2 [170 kB]
1061s Get:202 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper1 arm64 1.1.29 [13.1 kB]
1061s Get:203 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB]
1061s Get:204 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB]
1061s Get:205 http://ftpmaster.internal/ubuntu noble/main arm64 libxt6 arm64 1:1.2.1-1.1 [167 kB]
1062s Get:206 http://ftpmaster.internal/ubuntu noble/main arm64 libgs10 arm64 10.02.1~dfsg1-0ubuntu2 [3777 kB]
1062s Get:207 http://ftpmaster.internal/ubuntu noble/main arm64 ghostscript arm64 10.02.1~dfsg1-0ubuntu2 [43.4 kB]
1062s Get:208 http://ftpmaster.internal/ubuntu noble/universe arm64 libann0 arm64 1.1.2+doc-9 [25.1 kB]
1062s Get:209 http://ftpmaster.internal/ubuntu noble/universe arm64 libcdt5 arm64 2.42.2-8build1 [20.3 kB]
1062s Get:210 http://ftpmaster.internal/ubuntu noble/universe arm64 libcgraph6 arm64 2.42.2-8build1 [44.8 kB]
1062s Get:211 http://ftpmaster.internal/ubuntu noble/universe arm64 libgts-0.7-5 arm64 0.7.6+darcs121130-5 [157 kB]
1062s Get:212 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB]
1062s Get:213 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB]
1062s Get:214 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B]
1062s Get:215 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB]
1062s Get:216 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB]
1062s Get:217 http://ftpmaster.internal/ubuntu noble/main arm64 libltdl7 arm64 2.4.7-7 [40.3 kB]
1062s Get:218 http://ftpmaster.internal/ubuntu noble/main arm64 libthai-data all 0.1.29-2 [158 kB]
1062s Get:219 http://ftpmaster.internal/ubuntu noble/main arm64 libdatrie1 arm64 0.2.13-3 [21.7 kB]
1062s Get:220 http://ftpmaster.internal/ubuntu noble/main arm64 libthai0 arm64 0.1.29-2 [18.1 kB]
1062s Get:221 http://ftpmaster.internal/ubuntu noble/main arm64 libpango-1.0-0 arm64 1.51.0+ds-4 [226 kB]
1062s Get:222 http://ftpmaster.internal/ubuntu noble/main arm64 libpangoft2-1.0-0 arm64 1.51.0+ds-4 [41.2 kB]
1062s Get:223 http://ftpmaster.internal/ubuntu noble/main arm64 libpangocairo-1.0-0 arm64 1.51.0+ds-4 [27.6 kB]
1062s Get:224 http://ftpmaster.internal/ubuntu noble/universe arm64 libpathplan4 arm64 2.42.2-8build1 [22.6 kB]
1062s Get:225 http://ftpmaster.internal/ubuntu noble/universe arm64 libgvc6 arm64 2.42.2-8build1 [692 kB]
1062s Get:226 http://ftpmaster.internal/ubuntu noble/universe arm64 libgvpr2 arm64 2.42.2-8build1 [187 kB]
1062s Get:227 http://ftpmaster.internal/ubuntu noble/universe arm64 liblab-gamut1 arm64 2.42.2-8build1 [1860 kB]
1062s Get:228 http://ftpmaster.internal/ubuntu noble/main arm64 libxmu6 arm64 2:1.1.3-3 [48.9 kB]
1062s Get:229 http://ftpmaster.internal/ubuntu noble/main arm64 libxaw7 arm64 2:1.0.14-1 [184 kB]
1062s Get:230 http://ftpmaster.internal/ubuntu noble/universe arm64 graphviz arm64 2.42.2-8build1 [613 kB]
1062s Get:231 http://ftpmaster.internal/ubuntu noble/universe arm64 infernal arm64 1.1.5-2 [4132 kB]
1062s Get:232 http://ftpmaster.internal/ubuntu noble/main arm64 javascript-common all 11+nmu1 [5936 B]
1062s Get:233 http://ftpmaster.internal/ubuntu noble/universe arm64 kalign arm64 1:3.3.5-1 [92.0 kB]
1062s Get:234 http://ftpmaster.internal/ubuntu noble/universe arm64 lagan arm64 2.0-9 [193 kB]
1062s Get:235 http://ftpmaster.internal/ubuntu noble/main arm64 liberror-perl all 0.17029-2 [25.6 kB]
1062s Get:236 http://ftpmaster.internal/ubuntu noble/universe arm64 libipc-sharelite-perl arm64 0.17-5build1 [21.4 kB]
1062s Get:237 http://ftpmaster.internal/ubuntu noble/universe arm64 libcache-cache-perl all 1.08-3 [59.9 kB]
1062s Get:238 http://ftpmaster.internal/ubuntu noble/universe arm64 libace-perl arm64 1.92-11build3 [273 kB]
1062s Get:239 http://ftpmaster.internal/ubuntu noble/main arm64 libalgorithm-diff-xs-perl arm64 0.04-8build1 [10.9 kB]
1062s Get:240 http://ftpmaster.internal/ubuntu noble/universe arm64 libalgorithm-munkres-perl all 0.08-5 [10.5 kB]
1062s Get:241 http://ftpmaster.internal/ubuntu noble/main arm64 libllvm17 arm64 1:17.0.6-5build1 [25.0 MB]
1063s Get:242 http://ftpmaster.internal/ubuntu noble/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3 [14.1 MB]
1064s Get:243 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-amdgpu1 arm64 2.4.120-2 [20.4 kB]
1064s Get:244 http://ftpmaster.internal/ubuntu noble/universe arm64 libhsakmt1 arm64 5.7.0-1 [63.6 kB]
1064s Get:245 http://ftpmaster.internal/ubuntu noble/universe arm64 libhsa-runtime64-1 arm64 5.7.1-1 [286 kB]
1064s Get:246 http://ftpmaster.internal/ubuntu noble/universe arm64 libamdhip64-5 arm64 5.2.3-12 [5134 kB]
1064s Get:247 http://ftpmaster.internal/ubuntu noble/main arm64 libapache2-reload-perl all 0.14-1 [15.4 kB]
1064s Get:248 http://ftpmaster.internal/ubuntu noble/main arm64 libclass-method-modifiers-perl all 2.15-1 [16.1 kB]
1064s Get:249 http://ftpmaster.internal/ubuntu noble/main arm64 libclass-xsaccessor-perl arm64 1.19-4build2 [33.1 kB]
1064s Get:250 http://ftpmaster.internal/ubuntu noble/main arm64 libb-hooks-op-check-perl arm64 0.22-2build2 [9220 B]
1064s Get:251 http://ftpmaster.internal/ubuntu noble/main arm64 libdynaloader-functions-perl all 0.003-3 [12.1 kB]
1064s Get:252 http://ftpmaster.internal/ubuntu noble/main arm64 libdevel-callchecker-perl arm64 0.008-2build1 [13.7 kB]
1064s Get:253 http://ftpmaster.internal/ubuntu noble/main arm64 libparams-classify-perl arm64 0.015-2build3 [19.6 kB]
1064s Get:254 http://ftpmaster.internal/ubuntu noble/main arm64 libmodule-runtime-perl all 0.016-2 [16.4 kB]
1064s Get:255 http://ftpmaster.internal/ubuntu noble/main arm64 libimport-into-perl all 1.002005-2 [10.7 kB]
1064s Get:256 http://ftpmaster.internal/ubuntu noble/main arm64 librole-tiny-perl all 2.002004-1 [16.3 kB]
1064s Get:257 http://ftpmaster.internal/ubuntu noble/main arm64 libsub-quote-perl all 2.006008-1ubuntu1 [20.7 kB]
1064s Get:258 http://ftpmaster.internal/ubuntu noble/main arm64 libmoo-perl all 2.005005-1 [47.4 kB]
1064s Get:259 http://ftpmaster.internal/ubuntu noble/universe arm64 libtype-tiny-perl all 2.004000-1 [354 kB]
1064s Get:260 http://ftpmaster.internal/ubuntu noble/universe arm64 libarray-compare-perl all 3.0.8-1 [13.2 kB]
1064s Get:261 http://ftpmaster.internal/ubuntu noble/universe arm64 libasync-interrupt-perl arm64 1.26-1build4 [31.9 kB]
1064s Get:262 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB]
1064s Get:263 http://ftpmaster.internal/ubuntu noble/main arm64 libmodule-implementation-perl all 0.09-2 [12.0 kB]
1064s Get:264 http://ftpmaster.internal/ubuntu noble/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [6718 B]
1064s Get:265 http://ftpmaster.internal/ubuntu noble/main arm64 libvariable-magic-perl arm64 0.63-1build1 [34.2 kB]
1064s Get:266 http://ftpmaster.internal/ubuntu noble/main arm64 libb-hooks-endofscope-perl all 0.28-1 [15.8 kB]
1064s Get:267 http://ftpmaster.internal/ubuntu noble/main arm64 libberkeleydb-perl arm64 0.64-2build1 [122 kB]
1064s Get:268 http://ftpmaster.internal/ubuntu noble/universe arm64 libhtscodecs2 arm64 1.6.0-1 [78.1 kB]
1064s Get:269 http://ftpmaster.internal/ubuntu noble/universe arm64 libstaden-read14 arm64 1.15.0-1 [247 kB]
1064s Get:270 http://ftpmaster.internal/ubuntu noble/universe arm64 libbio-scf-perl arm64 1.03-6build1 [20.1 kB]
1064s Get:271 http://ftpmaster.internal/ubuntu noble/universe arm64 libcarp-clan-perl all 6.08-2 [11.9 kB]
1064s Get:272 http://ftpmaster.internal/ubuntu noble/universe arm64 libbit-vector-perl arm64 7.4-2build2 [136 kB]
1064s Get:273 http://ftpmaster.internal/ubuntu noble/main arm64 libcgi-fast-perl all 1:2.17-1 [10.3 kB]
1064s Get:274 http://ftpmaster.internal/ubuntu noble/universe arm64 libconvert-binary-c-perl arm64 0.84-1build3 [268 kB]
1064s Get:275 http://ftpmaster.internal/ubuntu noble/universe arm64 libcrypt-rc4-perl all 2.02-5 [7064 B]
1064s Get:276 http://ftpmaster.internal/ubuntu noble/main arm64 libdata-dump-perl all 1.25-1 [25.9 kB]
1064s Get:277 http://ftpmaster.internal/ubuntu noble/universe arm64 libdate-calc-perl all 6.4-2 [187 kB]
1064s Get:278 http://ftpmaster.internal/ubuntu noble/universe arm64 libdate-calc-xs-perl arm64 6.4-2build2 [46.6 kB]
1064s Get:279 http://ftpmaster.internal/ubuntu noble/main arm64 libdate-manip-perl all 6.95-1 [923 kB]
1064s Get:280 http://ftpmaster.internal/ubuntu noble/universe arm64 libdbd-mysql-perl arm64 4.050-5ubuntu2 [83.1 kB]
1064s Get:281 http://ftpmaster.internal/ubuntu noble/universe arm64 libdigest-perl-md5-perl all 1.9-5 [11.1 kB]
1064s Get:282 http://ftpmaster.internal/ubuntu noble/universe arm64 libdivsufsort3 arm64 2.0.1-6 [41.0 kB]
1064s Get:283 http://ftpmaster.internal/ubuntu noble/universe arm64 libev-perl arm64 4.34-1build1 [237 kB]
1064s Get:284 http://ftpmaster.internal/ubuntu noble/main arm64 libevent-pthreads-2.1-7 arm64 2.1.12-stable-9 [7738 B]
1064s Get:285 http://ftpmaster.internal/ubuntu noble/main arm64 librdmacm1t64 arm64 50.0-2 [70.6 kB]
1064s Get:286 http://ftpmaster.internal/ubuntu noble/universe arm64 libfabric1 arm64 1.17.0-3 [537 kB]
1064s Get:287 http://ftpmaster.internal/ubuntu noble/main arm64 libfcgi-bin arm64 2.4.2-2build2 [10.7 kB]
1064s Get:288 http://ftpmaster.internal/ubuntu noble/main arm64 libfont-afm-perl all 1.20-4 [13.0 kB]
1064s Get:289 http://ftpmaster.internal/ubuntu noble/main arm64 libfreezethaw-perl all 0.5001-3 [14.6 kB]
1064s Get:290 http://ftpmaster.internal/ubuntu noble/universe arm64 libsvg-perl all 2.87-1 [59.3 kB]
1064s Get:291 http://ftpmaster.internal/ubuntu noble/universe arm64 libgd-svg-perl all 0.33-3 [56.4 kB]
1064s Get:292 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB]
1064s Get:293 http://ftpmaster.internal/ubuntu noble/universe arm64 libheap-perl all 0.80-5 [33.8 kB]
1064s Get:294 http://ftpmaster.internal/ubuntu noble/universe arm64 libset-object-perl arm64 1.42-1build3 [32.8 kB]
1064s Get:295 http://ftpmaster.internal/ubuntu noble/universe arm64 libgraph-perl all 1:0.9727-1 [100 kB]
1064s Get:296 http://ftpmaster.internal/ubuntu noble/universe arm64 libparse-recdescent-perl all 1.967015+dfsg-4 [139 kB]
1064s Get:297 http://ftpmaster.internal/ubuntu noble/universe arm64 libxml-xpath-perl all 1.48-1 [67.5 kB]
1064s Get:298 http://ftpmaster.internal/ubuntu noble/universe arm64 libgraphviz-perl all 2.24-1 [86.4 kB]
1064s Get:299 http://ftpmaster.internal/ubuntu noble/universe arm64 libgts-bin arm64 0.7.6+darcs121130-5 [43.4 kB]
1064s Get:300 http://ftpmaster.internal/ubuntu noble/universe arm64 libguard-perl arm64 1.023-2build2 [14.5 kB]
1064s Get:301 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-form-perl all 6.11-1 [32.1 kB]
1064s Get:302 http://ftpmaster.internal/ubuntu noble/main arm64 libhtml-format-perl all 2.16-2 [36.9 kB]
1064s Get:303 http://ftpmaster.internal/ubuntu noble/universe arm64 libhtml-tableextract-perl all 2.15-2 [28.0 kB]
1064s Get:304 http://ftpmaster.internal/ubuntu noble/universe arm64 libhts3 arm64 1.18+ds-1 [422 kB]
1065s Get:305 http://ftpmaster.internal/ubuntu noble/universe arm64 libhwloc15 arm64 2.10.0-1 [158 kB]
1065s Get:306 http://ftpmaster.internal/ubuntu noble/universe arm64 libjcode-pm-perl arm64 2.06-1.1 [27.5 kB]
1065s Get:307 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
1065s Get:308 http://ftpmaster.internal/ubuntu noble/main arm64 libtypes-serialiser-perl all 1.01-1 [11.6 kB]
1065s Get:309 http://ftpmaster.internal/ubuntu noble/main arm64 libjson-xs-perl arm64 4.030-2build1 [83.1 kB]
1065s Get:310 http://ftpmaster.internal/ubuntu noble/universe arm64 libmath-derivative-perl all 1.01-3 [7206 B]
1065s Get:311 http://ftpmaster.internal/ubuntu noble/universe arm64 libmath-spline-perl all 0.02-4 [6384 B]
1065s Get:312 http://ftpmaster.internal/ubuntu noble/universe arm64 libmbedcrypto7 arm64 2.28.7-1ubuntu1 [206 kB]
1065s Get:313 http://ftpmaster.internal/ubuntu noble/universe arm64 libmbedx509-1 arm64 2.28.7-1ubuntu1 [46.8 kB]
1065s Get:314 http://ftpmaster.internal/ubuntu noble/universe arm64 libmbedtls14 arm64 2.28.7-1ubuntu1 [82.0 kB]
1065s Get:315 http://ftpmaster.internal/ubuntu noble/main arm64 libmldbm-perl all 2.05-4 [16.0 kB]
1065s Get:316 http://ftpmaster.internal/ubuntu noble/main arm64 libpackage-stash-perl all 0.40-1 [19.5 kB]
1065s Get:317 http://ftpmaster.internal/ubuntu noble/main arm64 libsub-identify-perl arm64 0.14-3build1 [9724 B]
1065s Get:318 http://ftpmaster.internal/ubuntu noble/main arm64 libsub-name-perl arm64 0.27-1build1 [10.4 kB]
1065s Get:319 http://ftpmaster.internal/ubuntu noble/main arm64 libnamespace-clean-perl all 0.27-2 [14.0 kB]
1065s Get:320 http://ftpmaster.internal/ubuntu noble/universe arm64 libole-storage-lite-perl all 0.22-1 [21.6 kB]
1065s Get:321 http://ftpmaster.internal/ubuntu noble/universe arm64 libmunge2 arm64 0.5.15-3ubuntu1 [14.8 kB]
1065s Get:322 http://ftpmaster.internal/ubuntu noble/main arm64 libpciaccess0 arm64 0.17-3 [18.6 kB]
1065s Get:323 http://ftpmaster.internal/ubuntu noble/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu1 [11.1 kB]
1065s Get:324 http://ftpmaster.internal/ubuntu noble/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1 [37.3 kB]
1065s Get:325 http://ftpmaster.internal/ubuntu noble/universe arm64 libhwloc-plugins arm64 2.10.0-1 [15.7 kB]
1065s Get:326 http://ftpmaster.internal/ubuntu noble/universe arm64 libpmix2 arm64 5.0.1-4 [659 kB]
1065s Get:327 http://ftpmaster.internal/ubuntu noble/universe arm64 libucx0 arm64 1.16.0+ds-4 [1076 kB]
1065s Get:328 http://ftpmaster.internal/ubuntu noble/universe arm64 libopenmpi3 arm64 4.1.6-5ubuntu1 [3081 kB]
1065s Get:329 http://ftpmaster.internal/ubuntu noble/main arm64 libpackage-stash-xs-perl arm64 0.30-1build2 [18.0 kB]
1065s Get:330 http://ftpmaster.internal/ubuntu noble/main arm64 libpaper-utils arm64 1.1.29 [8480 B]
1065s Get:331 http://ftpmaster.internal/ubuntu noble/universe arm64 libpostscript-perl all 0.06-3.1 [26.0 kB]
1065s Get:332 http://ftpmaster.internal/ubuntu noble/universe arm64 libreadonly-perl all 2.050-3 [19.9 kB]
1065s Get:333 http://ftpmaster.internal/ubuntu noble/universe arm64 libref-util-perl all 0.204-2 [15.1 kB]
1065s Get:334 http://ftpmaster.internal/ubuntu noble/universe arm64 libref-util-xs-perl arm64 0.117-2build2 [12.4 kB]
1065s Get:335 http://ftpmaster.internal/ubuntu noble/main arm64 rubygems-integration all 1.18 [5336 B]
1065s Get:336 http://ftpmaster.internal/ubuntu noble/main arm64 ruby3.1 arm64 3.1.2-7ubuntu4 [49.0 kB]
1065s Get:337 http://ftpmaster.internal/ubuntu noble/main arm64 ruby-rubygems all 3.4.20-1 [238 kB]
1065s Get:338 http://ftpmaster.internal/ubuntu noble/main arm64 ruby arm64 1:3.1+1 [3464 B]
1065s Get:339 http://ftpmaster.internal/ubuntu noble/main arm64 rake all 13.0.6-3 [61.6 kB]
1065s Get:340 http://ftpmaster.internal/ubuntu noble/main arm64 ruby-net-telnet all 0.2.0-1 [13.3 kB]
1065s Get:341 http://ftpmaster.internal/ubuntu noble/main arm64 ruby-webrick all 1.8.1-1 [52.3 kB]
1065s Get:342 http://ftpmaster.internal/ubuntu noble/main arm64 ruby-xmlrpc all 0.3.2-2 [24.8 kB]
1065s Get:343 http://ftpmaster.internal/ubuntu noble/main arm64 ruby-sdbm arm64 1.0.0-5build3 [17.9 kB]
1065s Get:344 http://ftpmaster.internal/ubuntu noble/main arm64 libruby3.1 arm64 3.1.2-7ubuntu4 [5115 kB]
1065s Get:345 http://ftpmaster.internal/ubuntu noble/main arm64 libruby arm64 1:3.1+1 [4640 B]
1065s Get:346 http://ftpmaster.internal/ubuntu noble/main arm64 libsort-naturally-perl all 1.03-4 [13.1 kB]
1065s Get:347 http://ftpmaster.internal/ubuntu noble/universe arm64 libspreadsheet-writeexcel-perl all 2.40-4 [497 kB]
1066s Get:348 http://ftpmaster.internal/ubuntu noble/universe arm64 libunicode-map-perl arm64 0.112-13build2 [204 kB]
1066s Get:349 http://ftpmaster.internal/ubuntu noble/universe arm64 libspreadsheet-parseexcel-perl all 0.6600-1 [144 kB]
1066s Get:350 http://ftpmaster.internal/ubuntu noble/universe arm64 libsvg-graph-perl all 0.02-4 [109 kB]
1066s Get:351 http://ftpmaster.internal/ubuntu noble/universe arm64 libtext-csv-xs-perl arm64 1.53-1build1 [119 kB]
1066s Get:352 http://ftpmaster.internal/ubuntu noble/main arm64 libtie-ixhash-perl all 1.23-4 [11.3 kB]
1066s Get:353 http://ftpmaster.internal/ubuntu noble/universe arm64 libtype-tiny-xs-perl arm64 0.025-1build1 [25.2 kB]
1066s Get:354 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB]
1066s Get:355 http://ftpmaster.internal/ubuntu noble/universe arm64 libxml-filter-buffertext-perl all 1.01-7 [6898 B]
1066s Get:356 http://ftpmaster.internal/ubuntu noble/main arm64 libxslt1.1 arm64 1.1.35-1 [161 kB]
1066s Get:357 http://ftpmaster.internal/ubuntu noble/universe arm64 libxml-libxslt-perl arm64 2.002001-1build1 [43.0 kB]
1066s Get:358 http://ftpmaster.internal/ubuntu noble/universe arm64 libxml-sax-writer-perl all 0.57-2 [20.4 kB]
1066s Get:359 http://ftpmaster.internal/ubuntu noble/universe arm64 libxmlrpc-lite-perl all 0.717-5 [22.4 kB]
1066s Get:360 http://ftpmaster.internal/ubuntu noble/main arm64 libyaml-libyaml-perl arm64 0.89+ds-1 [29.7 kB]
1066s Get:361 http://ftpmaster.internal/ubuntu noble/main arm64 libyaml-perl all 1.31-1 [65.7 kB]
1066s Get:362 http://ftpmaster.internal/ubuntu noble/universe arm64 lynx-common all 2.9.0rel.0-2 [1007 kB]
1066s Get:363 http://ftpmaster.internal/ubuntu noble/universe arm64 mafft arm64 7.505-1 [756 kB]
1066s Get:364 http://ftpmaster.internal/ubuntu noble/main arm64 mailcap all 3.70+nmu1ubuntu1 [23.8 kB]
1066s Get:365 http://ftpmaster.internal/ubuntu noble/universe arm64 maq arm64 0.7.1-9 [271 kB]
1066s Get:366 http://ftpmaster.internal/ubuntu noble/universe arm64 muscle arm64 1:5.1.0-1 [214 kB]
1066s Get:367 http://ftpmaster.internal/ubuntu noble/universe arm64 mustang arm64 3.2.4-1 [91.4 kB]
1066s Get:368 http://ftpmaster.internal/ubuntu noble/universe arm64 ncbi-data all 6.1.20170106+dfsg1-10 [4395 kB]
1066s Get:369 http://ftpmaster.internal/ubuntu noble/universe arm64 ncbi-blast+ arm64 2.12.0+ds-4 [12.1 MB]
1066s Get:370 http://ftpmaster.internal/ubuntu noble/universe arm64 ncbi-blast+-legacy all 2.12.0+ds-4 [4984 B]
1066s Get:371 http://ftpmaster.internal/ubuntu noble/universe arm64 ncoils arm64 2002-9 [22.9 kB]
1066s Get:372 http://ftpmaster.internal/ubuntu noble/universe arm64 openmpi-common all 4.1.6-5ubuntu1 [178 kB]
1066s Get:373 http://ftpmaster.internal/ubuntu noble/universe arm64 openmpi-bin arm64 4.1.6-5ubuntu1 [123 kB]
1066s Get:374 http://ftpmaster.internal/ubuntu noble/universe arm64 pal2nal all 14.1-3 [17.8 kB]
1066s Get:375 http://ftpmaster.internal/ubuntu noble/main arm64 perl-doc all 5.38.2-3 [7832 kB]
1067s Get:376 http://ftpmaster.internal/ubuntu noble/universe arm64 perl-tk arm64 1:804.036+dfsg1-1ubuntu1 [2039 kB]
1067s Get:377 http://ftpmaster.internal/ubuntu noble/universe arm64 phylip arm64 1:3.697+dfsg-3 [844 kB]
1067s Get:378 http://ftpmaster.internal/ubuntu noble/universe arm64 phyml arm64 3:3.3.20220408-3 [975 kB]
1067s Get:379 http://ftpmaster.internal/ubuntu noble/universe arm64 poa arm64 2.0+20060928-8 [50.2 kB]
1067s Get:380 http://ftpmaster.internal/ubuntu noble/universe arm64 prank arm64 0.0.170427+dfsg-3 [325 kB]
1067s Get:381 http://ftpmaster.internal/ubuntu noble/universe arm64 primer3 arm64 2.6.1-4 [211 kB]
1067s Get:382 http://ftpmaster.internal/ubuntu noble/universe arm64 probalign arm64 1.4-10 [67.3 kB]
1067s Get:383 http://ftpmaster.internal/ubuntu noble/universe arm64 probcons arm64 1.12-14 [129 kB]
1067s Get:384 http://ftpmaster.internal/ubuntu noble/universe arm64 proda arm64 1.0-14 [52.9 kB]
1067s Get:385 http://ftpmaster.internal/ubuntu noble/universe arm64 raxml arm64 8.2.13+dfsg-1 [999 kB]
1067s Get:386 http://ftpmaster.internal/ubuntu noble/universe arm64 samtools arm64 1.19.2-1 [584 kB]
1067s Get:387 http://ftpmaster.internal/ubuntu noble/universe arm64 sim4 arm64 0.0.20121010-8 [355 kB]
1067s Get:388 http://ftpmaster.internal/ubuntu noble/main arm64 ssl-cert all 1.1.2ubuntu1 [17.8 kB]
1067s Get:389 http://ftpmaster.internal/ubuntu noble/universe arm64 t-coffee arm64 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 [879 kB]
1067s Get:390 http://ftpmaster.internal/ubuntu noble/universe arm64 tigr-glimmer arm64 3.02b-6 [268 kB]
1067s Get:391 http://ftpmaster.internal/ubuntu noble/universe arm64 tm-align arm64 20190822+dfsg-2build1 [864 kB]
1067s Get:392 http://ftpmaster.internal/ubuntu noble/main arm64 unzip arm64 6.0-28ubuntu3 [171 kB]
1067s Get:393 http://ftpmaster.internal/ubuntu noble/universe arm64 wise-data all 2.4.1-23 [76.8 kB]
1067s Get:394 http://ftpmaster.internal/ubuntu noble/universe arm64 wise arm64 2.4.1-23 [964 kB]
1067s Get:395 http://ftpmaster.internal/ubuntu noble/main arm64 zip arm64 3.0-13 [172 kB]
1067s Get:396 http://ftpmaster.internal/ubuntu noble/universe arm64 bowtie arm64 1.3.1-3 [1346 kB]
1067s Get:397 http://ftpmaster.internal/ubuntu noble/universe arm64 hmmer arm64 3.4+dfsg-2 [1107 kB]
1067s Get:398 http://ftpmaster.internal/ubuntu noble/main arm64 libauthen-sasl-perl all 2.1700-1 [42.9 kB]
1067s Get:399 http://ftpmaster.internal/ubuntu noble/main arm64 libbsd-resource-perl arm64 1.2911-2build2 [27.0 kB]
1067s Get:400 http://ftpmaster.internal/ubuntu noble/universe arm64 libset-scalar-perl all 1.29-3 [28.6 kB]
1067s Get:401 http://ftpmaster.internal/ubuntu noble/universe arm64 lynx arm64 2.9.0rel.0-2 [691 kB]
1067s Get:402 http://ftpmaster.internal/ubuntu noble/universe arm64 med-config all 3.8.1 [11.2 kB]
1067s Get:403 http://ftpmaster.internal/ubuntu noble/universe arm64 paml arm64 4.9j+dfsg-4 [616 kB]
1069s Preconfiguring packages ...
1069s Fetched 366 MB in 17s (21.5 MB/s)
1069s Selecting previously unselected package libapr1:arm64.
1069s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74304 files and directories currently installed.)
1069s Preparing to unpack .../00-libapr1_1.7.2-3_arm64.deb ...
1069s Unpacking libapr1:arm64 (1.7.2-3) ...
1070s Selecting previously unselected package libaprutil1:arm64.
1070s Preparing to unpack .../01-libaprutil1_1.6.3-1ubuntu1_arm64.deb ...
1070s Unpacking libaprutil1:arm64 (1.6.3-1ubuntu1) ...
1070s Selecting previously unselected package libaprutil1-dbd-sqlite3:arm64.
1070s Preparing to unpack .../02-libaprutil1-dbd-sqlite3_1.6.3-1ubuntu1_arm64.deb ...
1070s Unpacking libaprutil1-dbd-sqlite3:arm64 (1.6.3-1ubuntu1) ...
1070s Selecting previously unselected package libaprutil1-ldap:arm64.
1070s Preparing to unpack .../03-libaprutil1-ldap_1.6.3-1ubuntu1_arm64.deb ...
1070s Unpacking libaprutil1-ldap:arm64 (1.6.3-1ubuntu1) ...
1070s Selecting previously unselected package liblua5.4-0:arm64.
1070s Preparing to unpack .../04-liblua5.4-0_5.4.6-3_arm64.deb ...
1070s Unpacking liblua5.4-0:arm64 (5.4.6-3) ...
1070s Selecting previously unselected package apache2-bin.
1070s Preparing to unpack .../05-apache2-bin_2.4.58-1ubuntu2_arm64.deb ...
1070s Unpacking apache2-bin (2.4.58-1ubuntu2) ...
1070s Selecting previously unselected package apache2-data.
1070s Preparing to unpack .../06-apache2-data_2.4.58-1ubuntu2_all.deb ...
1070s Unpacking apache2-data (2.4.58-1ubuntu2) ...
1070s Selecting previously unselected package apache2-utils.
1070s Preparing to unpack .../07-apache2-utils_2.4.58-1ubuntu2_arm64.deb ...
1070s Unpacking apache2-utils (2.4.58-1ubuntu2) ...
1070s Selecting previously unselected package apache2.
1070s Preparing to unpack .../08-apache2_2.4.58-1ubuntu2_arm64.deb ...
1070s Unpacking apache2 (2.4.58-1ubuntu2) ...
1070s Selecting previously unselected package libio-string-perl.
1070s Preparing to unpack .../09-libio-string-perl_1.08-4_all.deb ...
1070s Unpacking libio-string-perl (1.08-4) ...
1070s Selecting previously unselected package libdata-stag-perl.
1070s Preparing to unpack .../10-libdata-stag-perl_0.14-3_all.deb ...
1070s Unpacking libdata-stag-perl (0.14-3) ...
1070s Selecting previously unselected package libbio-perl-perl.
1070s Preparing to unpack .../11-libbio-perl-perl_1.7.8-1_all.deb ...
1070s Unpacking libbio-perl-perl (1.7.8-1) ...
1071s Selecting previously unselected package libclass-data-inheritable-perl.
1071s Preparing to unpack .../12-libclass-data-inheritable-perl_0.08-3_all.deb ...
1071s Unpacking libclass-data-inheritable-perl (0.08-3) ...
1071s Selecting previously unselected package libdevel-stacktrace-perl.
1071s Preparing to unpack .../13-libdevel-stacktrace-perl_2.0500-1_all.deb ...
1071s Unpacking libdevel-stacktrace-perl (2.0500-1) ...
1071s Selecting previously unselected package libexception-class-perl.
1071s Preparing to unpack .../14-libexception-class-perl_1.45-1_all.deb ...
1071s Unpacking libexception-class-perl (1.45-1) ...
1071s Selecting previously unselected package libtest-deep-perl.
1071s Preparing to unpack .../15-libtest-deep-perl_1.204-1_all.deb ...
1071s Unpacking libtest-deep-perl (1.204-1) ...
1071s Selecting previously unselected package libcapture-tiny-perl.
1071s Preparing to unpack .../16-libcapture-tiny-perl_0.48-2_all.deb ...
1071s Unpacking libcapture-tiny-perl (0.48-2) ...
1071s Selecting previously unselected package libalgorithm-diff-perl.
1071s Preparing to unpack .../17-libalgorithm-diff-perl_1.201-1_all.deb ...
1071s Unpacking libalgorithm-diff-perl (1.201-1) ...
1071s Selecting previously unselected package libtext-diff-perl.
1071s Preparing to unpack .../18-libtext-diff-perl_1.45-2_all.deb ...
1071s Unpacking libtext-diff-perl (1.45-2) ...
1071s Selecting previously unselected package libtest-differences-perl.
1071s Preparing to unpack .../19-libtest-differences-perl_0.71-1_all.deb ...
1071s Unpacking libtest-differences-perl (0.71-1) ...
1071s Selecting previously unselected package libsub-uplevel-perl.
1071s Preparing to unpack .../20-libsub-uplevel-perl_0.2800-3_all.deb ...
1071s Unpacking libsub-uplevel-perl (0.2800-3) ...
1071s Selecting previously unselected package libtest-exception-perl.
1071s Preparing to unpack .../21-libtest-exception-perl_0.43-3_all.deb ...
1071s Unpacking libtest-exception-perl (0.43-3) ...
1071s Selecting previously unselected package libtest-warn-perl.
1071s Preparing to unpack .../22-libtest-warn-perl_0.37-2_all.deb ...
1071s Unpacking libtest-warn-perl (0.37-2) ...
1071s Selecting previously unselected package libtest-most-perl.
1071s Preparing to unpack .../23-libtest-most-perl_0.38-1_all.deb ...
1071s Unpacking libtest-most-perl (0.38-1) ...
1071s Selecting previously unselected package bioperl.
1071s Preparing to unpack .../24-bioperl_1.7.8-1_all.deb ...
1071s Unpacking bioperl (1.7.8-1) ...
1071s Selecting previously unselected package fonts-dejavu-mono.
1071s Preparing to unpack .../25-fonts-dejavu-mono_2.37-8_all.deb ...
1071s Unpacking fonts-dejavu-mono (2.37-8) ...
1071s Selecting previously unselected package fonts-dejavu-core.
1071s Preparing to unpack .../26-fonts-dejavu-core_2.37-8_all.deb ...
1071s Unpacking fonts-dejavu-core (2.37-8) ...
1071s Selecting previously unselected package fonts-liberation.
1071s Preparing to unpack .../27-fonts-liberation_1%3a2.1.5-3_all.deb ...
1071s Unpacking fonts-liberation (1:2.1.5-3) ...
1071s Selecting previously unselected package libfontenc1:arm64.
1071s Preparing to unpack .../28-libfontenc1_1%3a1.1.4-1build3_arm64.deb ...
1071s Unpacking libfontenc1:arm64 (1:1.1.4-1build3) ...
1071s Selecting previously unselected package x11-common.
1071s Preparing to unpack .../29-x11-common_1%3a7.7+23ubuntu2_all.deb ...
1071s Unpacking x11-common (1:7.7+23ubuntu2) ...
1071s Selecting previously unselected package xfonts-encodings.
1071s Preparing to unpack .../30-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ...
1071s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ...
1071s Selecting previously unselected package xfonts-utils.
1071s Preparing to unpack .../31-xfonts-utils_1%3a7.7+6build2_arm64.deb ...
1071s Unpacking xfonts-utils (1:7.7+6build2) ...
1071s Selecting previously unselected package fonts-urw-base35.
1071s Preparing to unpack .../32-fonts-urw-base35_20200910-8_all.deb ...
1072s Unpacking fonts-urw-base35 (20200910-8) ...
1072s Selecting previously unselected package fontconfig-config.
1072s Preparing to unpack .../33-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ...
1072s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
1072s Selecting previously unselected package libfontconfig1:arm64.
1072s Preparing to unpack .../34-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ...
1072s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
1072s Selecting previously unselected package libjpeg-turbo8:arm64.
1072s Preparing to unpack .../35-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ...
1072s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
1072s Selecting previously unselected package libjpeg8:arm64.
1072s Preparing to unpack .../36-libjpeg8_8c-2ubuntu11_arm64.deb ...
1072s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
1072s Selecting previously unselected package libdeflate0:arm64.
1072s Preparing to unpack .../37-libdeflate0_1.19-1_arm64.deb ...
1072s Unpacking libdeflate0:arm64 (1.19-1) ...
1072s Selecting previously unselected package libjbig0:arm64.
1072s Preparing to unpack .../38-libjbig0_2.1-6.1ubuntu1_arm64.deb ...
1072s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ...
1072s Selecting previously unselected package liblerc4:arm64.
1072s Preparing to unpack .../39-liblerc4_4.0.0+ds-4ubuntu1_arm64.deb ...
1072s Unpacking liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
1072s Selecting previously unselected package libsharpyuv0:arm64.
1072s Preparing to unpack .../40-libsharpyuv0_1.3.2-0.4_arm64.deb ...
1072s Unpacking libsharpyuv0:arm64 (1.3.2-0.4) ...
1072s Selecting previously unselected package libwebp7:arm64.
1072s Preparing to unpack .../41-libwebp7_1.3.2-0.4_arm64.deb ...
1072s Unpacking libwebp7:arm64 (1.3.2-0.4) ...
1072s Selecting previously unselected package libtiff6:arm64.
1072s Preparing to unpack .../42-libtiff6_4.5.1+git230720-3ubuntu1_arm64.deb ...
1072s Unpacking libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
1072s Selecting previously unselected package libxpm4:arm64.
1072s Preparing to unpack .../43-libxpm4_1%3a3.5.17-1_arm64.deb ...
1072s Unpacking libxpm4:arm64 (1:3.5.17-1) ...
1072s Selecting previously unselected package libgd3:arm64.
1072s Preparing to unpack .../44-libgd3_2.3.3-9ubuntu1_arm64.deb ...
1072s Unpacking libgd3:arm64 (2.3.3-9ubuntu1) ...
1072s Selecting previously unselected package libgd-perl.
1072s Preparing to unpack .../45-libgd-perl_2.78-1build1_arm64.deb ...
1072s Unpacking libgd-perl (2.78-1build1) ...
1072s Selecting previously unselected package libdevel-symdump-perl.
1072s Preparing to unpack .../46-libdevel-symdump-perl_2.18-5_all.deb ...
1072s Unpacking libdevel-symdump-perl (2.18-5) ...
1072s Selecting previously unselected package liburi-perl.
1073s Preparing to unpack .../47-liburi-perl_5.27-1_all.deb ...
1073s Unpacking liburi-perl (5.27-1) ...
1073s Selecting previously unselected package libencode-locale-perl.
1073s Preparing to unpack .../48-libencode-locale-perl_1.05-3_all.deb ...
1073s Unpacking libencode-locale-perl (1.05-3) ...
1073s Selecting previously unselected package libtimedate-perl.
1073s Preparing to unpack .../49-libtimedate-perl_2.3300-2_all.deb ...
1073s Unpacking libtimedate-perl (2.3300-2) ...
1073s Selecting previously unselected package libhttp-date-perl.
1073s Preparing to unpack .../50-libhttp-date-perl_6.06-1_all.deb ...
1073s Unpacking libhttp-date-perl (6.06-1) ...
1073s Selecting previously unselected package libfile-listing-perl.
1073s Preparing to unpack .../51-libfile-listing-perl_6.16-1_all.deb ...
1073s Unpacking libfile-listing-perl (6.16-1) ...
1073s Selecting previously unselected package libhtml-tagset-perl.
1073s Preparing to unpack .../52-libhtml-tagset-perl_3.20-6_all.deb ...
1073s Unpacking libhtml-tagset-perl (3.20-6) ...
1073s Selecting previously unselected package libhtml-parser-perl:arm64.
1073s Preparing to unpack .../53-libhtml-parser-perl_3.81-1build1_arm64.deb ...
1073s Unpacking libhtml-parser-perl:arm64 (3.81-1build1) ...
1073s Selecting previously unselected package libhtml-tree-perl.
1073s Preparing to unpack .../54-libhtml-tree-perl_5.07-3_all.deb ...
1073s Unpacking libhtml-tree-perl (5.07-3) ...
1073s Selecting previously unselected package libclone-perl:arm64.
1073s Preparing to unpack .../55-libclone-perl_0.46-1build1_arm64.deb ...
1073s Unpacking libclone-perl:arm64 (0.46-1build1) ...
1073s Selecting previously unselected package libencode-perl:arm64.
1073s Preparing to unpack .../56-libencode-perl_3.21-1_arm64.deb ...
1073s Unpacking libencode-perl:arm64 (3.21-1) ...
1073s Selecting previously unselected package libio-html-perl.
1073s Preparing to unpack .../57-libio-html-perl_1.004-3_all.deb ...
1073s Unpacking libio-html-perl (1.004-3) ...
1073s Selecting previously unselected package liblwp-mediatypes-perl.
1073s Preparing to unpack .../58-liblwp-mediatypes-perl_6.04-2_all.deb ...
1073s Unpacking liblwp-mediatypes-perl (6.04-2) ...
1073s Selecting previously unselected package libhttp-message-perl.
1073s Preparing to unpack .../59-libhttp-message-perl_6.45-1ubuntu1_all.deb ...
1073s Unpacking libhttp-message-perl (6.45-1ubuntu1) ...
1073s Selecting previously unselected package libhttp-cookies-perl.
1073s Preparing to unpack .../60-libhttp-cookies-perl_6.11-1_all.deb ...
1073s Unpacking libhttp-cookies-perl (6.11-1) ...
1073s Selecting previously unselected package libhttp-negotiate-perl.
1073s Preparing to unpack .../61-libhttp-negotiate-perl_6.01-2_all.deb ...
1073s Unpacking libhttp-negotiate-perl (6.01-2) ...
1073s Selecting previously unselected package perl-openssl-defaults:arm64.
1073s Preparing to unpack .../62-perl-openssl-defaults_7_arm64.deb ...
1073s Unpacking perl-openssl-defaults:arm64 (7) ...
1073s Selecting previously unselected package libnet-ssleay-perl:arm64.
1073s Preparing to unpack .../63-libnet-ssleay-perl_1.94-1_arm64.deb ...
1073s Unpacking libnet-ssleay-perl:arm64 (1.94-1) ...
1073s Selecting previously unselected package libio-socket-ssl-perl.
1073s Preparing to unpack .../64-libio-socket-ssl-perl_2.085-1_all.deb ...
1073s Unpacking libio-socket-ssl-perl (2.085-1) ...
1073s Selecting previously unselected package libnet-http-perl.
1073s Preparing to unpack .../65-libnet-http-perl_6.23-1_all.deb ...
1073s Unpacking libnet-http-perl (6.23-1) ...
1073s Selecting previously unselected package liblwp-protocol-https-perl.
1073s Preparing to unpack .../66-liblwp-protocol-https-perl_6.13-1_all.deb ...
1073s Unpacking liblwp-protocol-https-perl (6.13-1) ...
1073s Selecting previously unselected package libtry-tiny-perl.
1073s Preparing to unpack .../67-libtry-tiny-perl_0.31-2_all.deb ...
1073s Unpacking libtry-tiny-perl (0.31-2) ...
1073s Selecting previously unselected package libwww-robotrules-perl.
1073s Preparing to unpack .../68-libwww-robotrules-perl_6.02-1_all.deb ...
1073s Unpacking libwww-robotrules-perl (6.02-1) ...
1073s Selecting previously unselected package libwww-perl.
1073s Preparing to unpack .../69-libwww-perl_6.76-1_all.deb ...
1073s Unpacking libwww-perl (6.76-1) ...
1073s Selecting previously unselected package libapache2-mod-perl2.
1073s Preparing to unpack .../70-libapache2-mod-perl2_2.0.13-1build1_arm64.deb ...
1073s Unpacking libapache2-mod-perl2 (2.0.13-1build1) ...
1073s Selecting previously unselected package libdbi-perl:arm64.
1073s Preparing to unpack .../71-libdbi-perl_1.643-4build1_arm64.deb ...
1073s Unpacking libdbi-perl:arm64 (1.643-4build1) ...
1073s Selecting previously unselected package libapache-dbi-perl.
1073s Preparing to unpack .../72-libapache-dbi-perl_1.12-3_all.deb ...
1073s Unpacking libapache-dbi-perl (1.12-3) ...
1073s Selecting previously unselected package libbio-db-biofetch-perl.
1073s Preparing to unpack .../73-libbio-db-biofetch-perl_1.7.3-4_all.deb ...
1073s Unpacking libbio-db-biofetch-perl (1.7.3-4) ...
1074s Selecting previously unselected package libcgi-pm-perl.
1074s Preparing to unpack .../74-libcgi-pm-perl_4.61-1_all.deb ...
1074s Unpacking libcgi-pm-perl (4.61-1) ...
1074s Selecting previously unselected package libbio-db-gff-perl.
1074s Preparing to unpack .../75-libbio-db-gff-perl_1.7.4-1_all.deb ...
1074s Unpacking libbio-db-gff-perl (1.7.4-1) ...
1074s Selecting previously unselected package libpq5:arm64.
1074s Preparing to unpack .../76-libpq5_16.2-1_arm64.deb ...
1074s Unpacking libpq5:arm64 (16.2-1) ...
1074s Selecting previously unselected package libdbd-pg-perl.
1074s Preparing to unpack .../77-libdbd-pg-perl_3.18.0-1build1_arm64.deb ...
1074s Unpacking libdbd-pg-perl (3.18.0-1build1) ...
1074s Selecting previously unselected package libdbd-sqlite3-perl:arm64.
1074s Preparing to unpack .../78-libdbd-sqlite3-perl_1.74-1build1_arm64.deb ...
1074s Unpacking libdbd-sqlite3-perl:arm64 (1.74-1build1) ...
1074s Selecting previously unselected package libbio-db-seqfeature-perl.
1074s Preparing to unpack .../79-libbio-db-seqfeature-perl_1.7.4-2_all.deb ...
1074s Unpacking libbio-db-seqfeature-perl (1.7.4-2) ...
1074s Selecting previously unselected package libbio-graphics-perl.
1074s Preparing to unpack .../80-libbio-graphics-perl_2.40-6_all.deb ...
1074s Unpacking libbio-graphics-perl (2.40-6) ...
1074s Selecting previously unselected package libbio-coordinate-perl.
1074s Preparing to unpack .../81-libbio-coordinate-perl_1.7.1-4_all.deb ...
1074s Unpacking libbio-coordinate-perl (1.7.1-4) ...
1074s Selecting previously unselected package libcgi-session-perl.
1074s Preparing to unpack .../82-libcgi-session-perl_4.48-4_all.deb ...
1074s Unpacking libcgi-session-perl (4.48-4) ...
1074s Selecting previously unselected package libjson-perl.
1074s Preparing to unpack .../83-libjson-perl_4.10000-1_all.deb ...
1074s Unpacking libjson-perl (4.10000-1) ...
1074s Selecting previously unselected package libexporter-tiny-perl.
1074s Preparing to unpack .../84-libexporter-tiny-perl_1.006002-1_all.deb ...
1074s Unpacking libexporter-tiny-perl (1.006002-1) ...
1074s Selecting previously unselected package liblist-moreutils-xs-perl.
1074s Preparing to unpack .../85-liblist-moreutils-xs-perl_0.430-3build3_arm64.deb ...
1074s Unpacking liblist-moreutils-xs-perl (0.430-3build3) ...
1074s Selecting previously unselected package liblist-moreutils-perl.
1074s Preparing to unpack .../86-liblist-moreutils-perl_0.430-2_all.deb ...
1074s Unpacking liblist-moreutils-perl (0.430-2) ...
1074s Selecting previously unselected package libstatistics-descriptive-perl.
1074s Preparing to unpack .../87-libstatistics-descriptive-perl_3.0801-1_all.deb ...
1074s Unpacking libstatistics-descriptive-perl (3.0801-1) ...
1074s Selecting previously unselected package libhttp-daemon-perl.
1074s Preparing to unpack .../88-libhttp-daemon-perl_6.16-1_all.deb ...
1074s Unpacking libhttp-daemon-perl (6.16-1) ...
1074s Selecting previously unselected package libterm-readkey-perl.
1074s Preparing to unpack .../89-libterm-readkey-perl_2.38-2build2_arm64.deb ...
1074s Unpacking libterm-readkey-perl (2.38-2build2) ...
1074s dpkg: libreadline8:arm64: dependency problems, but removing anyway as you requested:
1074s  parted depends on libreadline8 (>= 6.0).
1074s  libpython3.12-stdlib:arm64 depends on libreadline8 (>= 7.0~beta).
1074s  gpgsm depends on libreadline8 (>= 6.0).
1074s  gpgconf depends on libreadline8 (>= 6.0).
1074s  gpg depends on libreadline8 (>= 6.0).
1074s  gawk depends on libreadline8 (>= 6.0).
1074s  fdisk depends on libreadline8 (>= 6.0).
1074s 
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1074s Removing libreadline8:arm64 (8.2-3) ...
1075s Selecting previously unselected package libreadline8t64:arm64.
1075s (Reading database ... 
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1075s Preparing to unpack .../000-libreadline8t64_8.2-3.1_arm64.deb ...
1075s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
1075s Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
1075s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
1075s Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
1075s Unpacking libreadline8t64:arm64 (8.2-3.1) ...
1075s Selecting previously unselected package sqlite3.
1075s Preparing to unpack .../001-sqlite3_3.45.1-1ubuntu1_arm64.deb ...
1075s Unpacking sqlite3 (3.45.1-1ubuntu1) ...
1075s Selecting previously unselected package libjs-prototype.
1075s Preparing to unpack .../002-libjs-prototype_1.7.3-1_all.deb ...
1075s Unpacking libjs-prototype (1.7.3-1) ...
1075s Selecting previously unselected package libjs-scriptaculous.
1075s Preparing to unpack .../003-libjs-scriptaculous_1.9.0-3_all.deb ...
1075s Unpacking libjs-scriptaculous (1.9.0-3) ...
1075s Selecting previously unselected package libanyevent-perl.
1075s Preparing to unpack .../004-libanyevent-perl_7.170-2build4_arm64.deb ...
1075s Unpacking libanyevent-perl (7.170-2build4) ...
1075s Selecting previously unselected package libanyevent-cachedns-perl.
1075s Preparing to unpack .../005-libanyevent-cachedns-perl_0.08-3_all.deb ...
1075s Unpacking libanyevent-cachedns-perl (0.08-3) ...
1075s Selecting previously unselected package libcommon-sense-perl:arm64.
1075s Preparing to unpack .../006-libcommon-sense-perl_3.75-3build1_arm64.deb ...
1075s Unpacking libcommon-sense-perl:arm64 (3.75-3build1) ...
1075s Selecting previously unselected package libanyevent-http-perl.
1075s Preparing to unpack .../007-libanyevent-http-perl_2.25-2_all.deb ...
1075s Unpacking libanyevent-http-perl (2.25-2) ...
1075s Selecting previously unselected package libstring-approx-perl.
1075s Preparing to unpack .../008-libstring-approx-perl_3.28-2build2_arm64.deb ...
1075s Unpacking libstring-approx-perl (3.28-2build2) ...
1075s Selecting previously unselected package libxml-namespacesupport-perl.
1075s Preparing to unpack .../009-libxml-namespacesupport-perl_1.12-2_all.deb ...
1075s Unpacking libxml-namespacesupport-perl (1.12-2) ...
1075s Selecting previously unselected package libxml-sax-base-perl.
1075s Preparing to unpack .../010-libxml-sax-base-perl_1.09-3_all.deb ...
1075s Unpacking libxml-sax-base-perl (1.09-3) ...
1075s Selecting previously unselected package libxml-sax-perl.
1075s Preparing to unpack .../011-libxml-sax-perl_1.02+dfsg-3_all.deb ...
1075s Unpacking libxml-sax-perl (1.02+dfsg-3) ...
1075s Selecting previously unselected package libxml-libxml-perl.
1075s Preparing to unpack .../012-libxml-libxml-perl_2.0207+dfsg+really+2.0134-1build2_arm64.deb ...
1075s Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-1build2) ...
1075s Selecting previously unselected package libxml-parser-perl.
1075s Preparing to unpack .../013-libxml-parser-perl_2.47-1build1_arm64.deb ...
1075s Unpacking libxml-parser-perl (2.47-1build1) ...
1075s Selecting previously unselected package libxml-sax-expat-perl.
1075s Preparing to unpack .../014-libxml-sax-expat-perl_0.51-2_all.deb ...
1075s Unpacking libxml-sax-expat-perl (0.51-2) ...
1075s Selecting previously unselected package libxml-simple-perl.
1075s Preparing to unpack .../015-libxml-simple-perl_2.25-2_all.deb ...
1075s Unpacking libxml-simple-perl (2.25-2) ...
1075s Selecting previously unselected package libvm-ec2-perl.
1075s Preparing to unpack .../016-libvm-ec2-perl_1.28-4_all.deb ...
1075s Unpacking libvm-ec2-perl (1.28-4) ...
1075s Selecting previously unselected package gbrowse.
1075s Preparing to unpack .../017-gbrowse_2.56+dfsg-12build1_all.deb ...
1075s Unpacking gbrowse (2.56+dfsg-12build1) ...
1075s Selecting previously unselected package gbrowse-data.
1075s Preparing to unpack .../018-gbrowse-data_2.56+dfsg-12build1_all.deb ...
1075s Unpacking gbrowse-data (2.56+dfsg-12build1) ...
1075s Selecting previously unselected package gbrowse-calign:arm64.
1075s Preparing to unpack .../019-gbrowse-calign_2.56+dfsg-12build1_arm64.deb ...
1075s Unpacking gbrowse-calign:arm64 (2.56+dfsg-12build1) ...
1075s Selecting previously unselected package dctrl-tools.
1075s Preparing to unpack .../020-dctrl-tools_2.24-3build2_arm64.deb ...
1075s Unpacking dctrl-tools (2.24-3build2) ...
1075s Selecting previously unselected package autodep8.
1075s Preparing to unpack .../021-autodep8_0.28_all.deb ...
1075s Unpacking autodep8 (0.28) ...
1076s Selecting previously unselected package pkg-perl-autopkgtest.
1076s Preparing to unpack .../022-pkg-perl-autopkgtest_0.77_all.deb ...
1076s Unpacking pkg-perl-autopkgtest (0.77) ...
1076s Selecting previously unselected package fonts-droid-fallback.
1076s Preparing to unpack .../023-fonts-droid-fallback_1%3a6.0.1r16-1.1build1_all.deb ...
1076s Unpacking fonts-droid-fallback (1:6.0.1r16-1.1build1) ...
1076s Selecting previously unselected package fonts-lato.
1076s Preparing to unpack .../024-fonts-lato_2.015-1_all.deb ...
1076s Unpacking fonts-lato (2.015-1) ...
1076s Selecting previously unselected package poppler-data.
1076s Preparing to unpack .../025-poppler-data_0.4.12-1_all.deb ...
1076s Unpacking poppler-data (0.4.12-1) ...
1076s Selecting previously unselected package alsa-topology-conf.
1076s Preparing to unpack .../026-alsa-topology-conf_1.2.5.1-2_all.deb ...
1076s Unpacking alsa-topology-conf (1.2.5.1-2) ...
1076s Selecting previously unselected package libasound2-data.
1076s Preparing to unpack .../027-libasound2-data_1.2.10-3build1_all.deb ...
1076s Unpacking libasound2-data (1.2.10-3build1) ...
1076s Selecting previously unselected package libasound2:arm64.
1076s Preparing to unpack .../028-libasound2_1.2.10-3build1_arm64.deb ...
1076s Unpacking libasound2:arm64 (1.2.10-3build1) ...
1076s Selecting previously unselected package alsa-ucm-conf.
1076s Preparing to unpack .../029-alsa-ucm-conf_1.2.10-1ubuntu3_all.deb ...
1076s Unpacking alsa-ucm-conf (1.2.10-1ubuntu3) ...
1076s Selecting previously unselected package amap-align.
1076s Preparing to unpack .../030-amap-align_2.2+git20080214.600fc29+dfsg-2_arm64.deb ...
1076s Unpacking amap-align (2.2+git20080214.600fc29+dfsg-2) ...
1076s Selecting previously unselected package bedtools.
1077s Preparing to unpack .../031-bedtools_2.31.1+dfsg-2_arm64.deb ...
1077s Unpacking bedtools (2.31.1+dfsg-2) ...
1077s Selecting previously unselected package libio-pty-perl.
1077s Preparing to unpack .../032-libio-pty-perl_1%3a1.20-1_arm64.deb ...
1077s Unpacking libio-pty-perl (1:1.20-1) ...
1077s Selecting previously unselected package libipc-run-perl.
1077s Preparing to unpack .../033-libipc-run-perl_20231003.0-1_all.deb ...
1077s Unpacking libipc-run-perl (20231003.0-1) ...
1077s Selecting previously unselected package libfile-sort-perl.
1077s Preparing to unpack .../034-libfile-sort-perl_1.01-3_all.deb ...
1077s Unpacking libfile-sort-perl (1.01-3) ...
1077s Selecting previously unselected package libbio-perl-run-perl.
1077s Preparing to unpack .../035-libbio-perl-run-perl_1.7.3-9_all.deb ...
1077s Unpacking libbio-perl-run-perl (1.7.3-9) ...
1077s Selecting previously unselected package clustalw.
1077s Preparing to unpack .../036-clustalw_2.1+lgpl-7_arm64.deb ...
1077s Unpacking clustalw (2.1+lgpl-7) ...
1077s Selecting previously unselected package libbio-tools-run-alignment-clustalw-perl.
1077s Preparing to unpack .../037-libbio-tools-run-alignment-clustalw-perl_1.7.4-3_all.deb ...
1077s Unpacking libbio-tools-run-alignment-clustalw-perl (1.7.4-3) ...
1077s Selecting previously unselected package libfile-slurp-tiny-perl.
1077s Preparing to unpack .../038-libfile-slurp-tiny-perl_0.004-2_all.deb ...
1077s Unpacking libfile-slurp-tiny-perl (0.004-2) ...
1077s Selecting previously unselected package libtree-dagnode-perl.
1077s Preparing to unpack .../039-libtree-dagnode-perl_1.32-1_all.deb ...
1077s Unpacking libtree-dagnode-perl (1.32-1) ...
1077s Selecting previously unselected package libxml-perl.
1077s Preparing to unpack .../040-libxml-perl_0.08-4_all.deb ...
1077s Unpacking libxml-perl (0.08-4) ...
1077s Selecting previously unselected package libxml-regexp-perl.
1077s Preparing to unpack .../041-libxml-regexp-perl_0.04-1.1_all.deb ...
1077s Unpacking libxml-regexp-perl (0.04-1.1) ...
1077s Selecting previously unselected package libxml-dom-perl.
1077s Preparing to unpack .../042-libxml-dom-perl_1.46-2_all.deb ...
1077s Unpacking libxml-dom-perl (1.46-2) ...
1077s Selecting previously unselected package libxml-xpathengine-perl.
1077s Preparing to unpack .../043-libxml-xpathengine-perl_0.14-2_all.deb ...
1077s Unpacking libxml-xpathengine-perl (0.14-2) ...
1077s Selecting previously unselected package libxml-dom-xpath-perl.
1077s Preparing to unpack .../044-libxml-dom-xpath-perl_0.14-4_all.deb ...
1077s Unpacking libxml-dom-xpath-perl (0.14-4) ...
1077s Selecting previously unselected package libbio-featureio-perl.
1077s Preparing to unpack .../045-libbio-featureio-perl_1.6.905-2_all.deb ...
1077s Unpacking libbio-featureio-perl (1.6.905-2) ...
1077s Selecting previously unselected package libxml-twig-perl.
1077s Preparing to unpack .../046-libxml-twig-perl_1%3a3.52-2_all.deb ...
1077s Unpacking libxml-twig-perl (1:3.52-2) ...
1077s Selecting previously unselected package libxml-writer-perl.
1077s Preparing to unpack .../047-libxml-writer-perl_0.900-2_all.deb ...
1077s Unpacking libxml-writer-perl (0.900-2) ...
1077s Selecting previously unselected package libbio-variation-perl.
1077s Preparing to unpack .../048-libbio-variation-perl_1.7.5-3_all.deb ...
1077s Unpacking libbio-variation-perl (1.7.5-3) ...
1077s Selecting previously unselected package libbio-cluster-perl.
1077s Preparing to unpack .../049-libbio-cluster-perl_1.7.3-6_all.deb ...
1077s Unpacking libbio-cluster-perl (1.7.3-6) ...
1077s Selecting previously unselected package libtest-requiresinternet-perl.
1077s Preparing to unpack .../050-libtest-requiresinternet-perl_0.05-4_all.deb ...
1077s Unpacking libtest-requiresinternet-perl (0.05-4) ...
1078s Selecting previously unselected package libbio-asn1-entrezgene-perl.
1078s Preparing to unpack .../051-libbio-asn1-entrezgene-perl_1.730-3_all.deb ...
1078s Unpacking libbio-asn1-entrezgene-perl (1.730-3) ...
1078s Selecting previously unselected package libtext-csv-perl.
1078s Preparing to unpack .../052-libtext-csv-perl_2.04-1_all.deb ...
1078s Unpacking libtext-csv-perl (2.04-1) ...
1078s Selecting previously unselected package libbio-eutilities-perl.
1078s Preparing to unpack .../053-libbio-eutilities-perl_1.77-2_all.deb ...
1078s Unpacking libbio-eutilities-perl (1.77-2) ...
1078s Selecting previously unselected package libbio-tools-run-remoteblast-perl.
1078s Preparing to unpack .../054-libbio-tools-run-remoteblast-perl_1.7.3-3_all.deb ...
1078s Unpacking libbio-tools-run-remoteblast-perl (1.7.3-3) ...
1078s Selecting previously unselected package libclass-inspector-perl.
1078s Preparing to unpack .../055-libclass-inspector-perl_1.36-3_all.deb ...
1078s Unpacking libclass-inspector-perl (1.36-3) ...
1078s Selecting previously unselected package libfcgi0ldbl:arm64.
1078s Preparing to unpack .../056-libfcgi0ldbl_2.4.2-2build2_arm64.deb ...
1078s Unpacking libfcgi0ldbl:arm64 (2.4.2-2build2) ...
1078s Selecting previously unselected package libfcgi-perl.
1078s Preparing to unpack .../057-libfcgi-perl_0.82+ds-2build1_arm64.deb ...
1078s Unpacking libfcgi-perl (0.82+ds-2build1) ...
1078s Selecting previously unselected package libio-sessiondata-perl.
1078s Preparing to unpack .../058-libio-sessiondata-perl_1.03-3_all.deb ...
1078s Unpacking libio-sessiondata-perl (1.03-3) ...
1078s Selecting previously unselected package libio-stringy-perl.
1078s Preparing to unpack .../059-libio-stringy-perl_2.111-3_all.deb ...
1078s Unpacking libio-stringy-perl (2.111-3) ...
1078s Selecting previously unselected package libconvert-binhex-perl.
1078s Preparing to unpack .../060-libconvert-binhex-perl_1.125-3_all.deb ...
1078s Unpacking libconvert-binhex-perl (1.125-3) ...
1078s Selecting previously unselected package libnet-smtp-ssl-perl.
1078s Preparing to unpack .../061-libnet-smtp-ssl-perl_1.04-2_all.deb ...
1078s Unpacking libnet-smtp-ssl-perl (1.04-2) ...
1078s Selecting previously unselected package libmailtools-perl.
1078s Preparing to unpack .../062-libmailtools-perl_2.21-2_all.deb ...
1078s Unpacking libmailtools-perl (2.21-2) ...
1078s Selecting previously unselected package libmime-tools-perl.
1078s Preparing to unpack .../063-libmime-tools-perl_5.514-1_all.deb ...
1078s Unpacking libmime-tools-perl (5.514-1) ...
1078s Selecting previously unselected package libtask-weaken-perl.
1078s Preparing to unpack .../064-libtask-weaken-perl_1.06-2_all.deb ...
1078s Unpacking libtask-weaken-perl (1.06-2) ...
1078s Selecting previously unselected package libsoap-lite-perl.
1078s Preparing to unpack .../065-libsoap-lite-perl_1.27-3_all.deb ...
1078s Unpacking libsoap-lite-perl (1.27-3) ...
1078s Selecting previously unselected package ca-certificates-java.
1078s Preparing to unpack .../066-ca-certificates-java_20240118_all.deb ...
1078s Unpacking ca-certificates-java (20240118) ...
1078s Selecting previously unselected package java-common.
1078s Preparing to unpack .../067-java-common_0.75+exp1_all.deb ...
1078s Unpacking java-common (0.75+exp1) ...
1078s Selecting previously unselected package libavahi-common-data:arm64.
1078s Preparing to unpack .../068-libavahi-common-data_0.8-13ubuntu2_arm64.deb ...
1078s Unpacking libavahi-common-data:arm64 (0.8-13ubuntu2) ...
1078s Selecting previously unselected package libavahi-common3:arm64.
1078s Preparing to unpack .../069-libavahi-common3_0.8-13ubuntu2_arm64.deb ...
1078s Unpacking libavahi-common3:arm64 (0.8-13ubuntu2) ...
1078s Selecting previously unselected package libavahi-client3:arm64.
1078s Preparing to unpack .../070-libavahi-client3_0.8-13ubuntu2_arm64.deb ...
1078s Unpacking libavahi-client3:arm64 (0.8-13ubuntu2) ...
1078s Selecting previously unselected package libcups2:arm64.
1078s Preparing to unpack .../071-libcups2_2.4.6-0ubuntu3_arm64.deb ...
1078s Unpacking libcups2:arm64 (2.4.6-0ubuntu3) ...
1078s Selecting previously unselected package liblcms2-2:arm64.
1078s Preparing to unpack .../072-liblcms2-2_2.14-2_arm64.deb ...
1078s Unpacking liblcms2-2:arm64 (2.14-2) ...
1078s Selecting previously unselected package libgraphite2-3:arm64.
1078s Preparing to unpack .../073-libgraphite2-3_1.3.14-2_arm64.deb ...
1078s Unpacking libgraphite2-3:arm64 (1.3.14-2) ...
1078s Selecting previously unselected package libharfbuzz0b:arm64.
1078s Preparing to unpack .../074-libharfbuzz0b_8.3.0-2_arm64.deb ...
1078s Unpacking libharfbuzz0b:arm64 (8.3.0-2) ...
1078s Selecting previously unselected package libpcsclite1:arm64.
1078s Preparing to unpack .../075-libpcsclite1_2.0.0-1_arm64.deb ...
1078s Unpacking libpcsclite1:arm64 (2.0.0-1) ...
1078s Selecting previously unselected package openjdk-21-jre-headless:arm64.
1078s Preparing to unpack .../076-openjdk-21-jre-headless_21.0.2+13-2_arm64.deb ...
1078s Unpacking openjdk-21-jre-headless:arm64 (21.0.2+13-2) ...
1079s Selecting previously unselected package default-jre-headless.
1079s Preparing to unpack .../077-default-jre-headless_2%3a1.21-75+exp1_arm64.deb ...
1079s Unpacking default-jre-headless (2:1.21-75+exp1) ...
1079s Selecting previously unselected package openjdk-21-jdk-headless:arm64.
1079s Preparing to unpack .../078-openjdk-21-jdk-headless_21.0.2+13-2_arm64.deb ...
1080s Unpacking openjdk-21-jdk-headless:arm64 (21.0.2+13-2) ...
1080s Selecting previously unselected package default-jdk-headless.
1080s Preparing to unpack .../079-default-jdk-headless_2%3a1.21-75+exp1_arm64.deb ...
1080s Unpacking default-jdk-headless (2:1.21-75+exp1) ...
1080s Selecting previously unselected package libgomp1:arm64.
1080s Preparing to unpack .../080-libgomp1_14-20240303-1ubuntu1_arm64.deb ...
1080s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ...
1080s Selecting previously unselected package hyphy-common.
1080s Preparing to unpack .../081-hyphy-common_2.5.59+dfsg-1_all.deb ...
1080s Unpacking hyphy-common (2.5.59+dfsg-1) ...
1080s Selecting previously unselected package hyphy-pt.
1080s Preparing to unpack .../082-hyphy-pt_2.5.59+dfsg-1_arm64.deb ...
1080s Unpacking hyphy-pt (2.5.59+dfsg-1) ...
1080s Selecting previously unselected package bioperl-run.
1080s Preparing to unpack .../083-bioperl-run_1.7.3-9_all.deb ...
1080s Unpacking bioperl-run (1.7.3-9) ...
1080s Selecting previously unselected package menu.
1080s Preparing to unpack .../084-menu_2.1.50_arm64.deb ...
1080s Unpacking menu (2.1.50) ...
1080s Selecting previously unselected package blends-common.
1080s Preparing to unpack .../085-blends-common_0.7.6_all.deb ...
1080s Unpacking blends-common (0.7.6) ...
1080s Selecting previously unselected package bwa.
1080s Preparing to unpack .../086-bwa_0.7.17-7_arm64.deb ...
1080s Unpacking bwa (0.7.17-7) ...
1081s Selecting previously unselected package libargtable2-0.
1081s Preparing to unpack .../087-libargtable2-0_13-1.1_arm64.deb ...
1081s Unpacking libargtable2-0 (13-1.1) ...
1081s Selecting previously unselected package clustalo.
1081s Preparing to unpack .../088-clustalo_1.2.4-8_arm64.deb ...
1081s Unpacking clustalo (1.2.4-8) ...
1081s Selecting previously unselected package dialign.
1081s Preparing to unpack .../089-dialign_2.2.1-11_arm64.deb ...
1081s Unpacking dialign (2.2.1-11) ...
1081s Selecting previously unselected package dialign-tx-data.
1081s Preparing to unpack .../090-dialign-tx-data_1.0.2-14_all.deb ...
1081s Unpacking dialign-tx-data (1.0.2-14) ...
1081s Selecting previously unselected package dialign-tx.
1081s Preparing to unpack .../091-dialign-tx_1.0.2-14_arm64.deb ...
1081s Unpacking dialign-tx (1.0.2-14) ...
1081s Selecting previously unselected package libhpdf-2.3.0:arm64.
1081s Preparing to unpack .../092-libhpdf-2.3.0_2.3.0+dfsg-1build1_arm64.deb ...
1081s Unpacking libhpdf-2.3.0:arm64 (2.3.0+dfsg-1build1) ...
1081s Selecting previously unselected package mysql-common.
1081s Preparing to unpack .../093-mysql-common_5.8+1.1.0_all.deb ...
1081s Unpacking mysql-common (5.8+1.1.0) ...
1081s Selecting previously unselected package libmysqlclient21:arm64.
1081s Preparing to unpack .../094-libmysqlclient21_8.0.36-1_arm64.deb ...
1081s Unpacking libmysqlclient21:arm64 (8.0.36-1) ...
1081s Selecting previously unselected package emboss-lib.
1081s Preparing to unpack .../095-emboss-lib_6.6.0+dfsg-12ubuntu1_arm64.deb ...
1081s Unpacking emboss-lib (6.6.0+dfsg-12ubuntu1) ...
1081s Selecting previously unselected package emboss-data.
1081s Preparing to unpack .../096-emboss-data_6.6.0+dfsg-12ubuntu1_all.deb ...
1081s Unpacking emboss-data (6.6.0+dfsg-12ubuntu1) ...
1084s Selecting previously unselected package emboss.
1085s Preparing to unpack .../097-emboss_6.6.0+dfsg-12ubuntu1_arm64.deb ...
1085s Unpacking emboss (6.6.0+dfsg-12ubuntu1) ...
1085s Selecting previously unselected package exonerate.
1085s Preparing to unpack .../098-exonerate_2.4.0-5_arm64.deb ...
1085s Unpacking exonerate (2.4.0-5) ...
1085s Selecting previously unselected package fontconfig.
1085s Preparing to unpack .../099-fontconfig_2.15.0-1ubuntu1_arm64.deb ...
1085s Unpacking fontconfig (2.15.0-1ubuntu1) ...
1085s Selecting previously unselected package fonts-liberation-sans-narrow.
1085s Preparing to unpack .../100-fonts-liberation-sans-narrow_1%3a1.07.6-4_all.deb ...
1085s Unpacking fonts-liberation-sans-narrow (1:1.07.6-4) ...
1085s Selecting previously unselected package fonts-liberation2.
1085s Preparing to unpack .../101-fonts-liberation2_1%3a2.1.5-3_all.deb ...
1085s Unpacking fonts-liberation2 (1:2.1.5-3) ...
1085s Selecting previously unselected package fonts-noto-mono.
1085s Preparing to unpack .../102-fonts-noto-mono_20201225-2_all.deb ...
1085s Unpacking fonts-noto-mono (20201225-2) ...
1085s Selecting previously unselected package mummer.
1085s Preparing to unpack .../103-mummer_3.23+dfsg-8_arm64.deb ...
1085s Unpacking mummer (3.23+dfsg-8) ...
1085s Selecting previously unselected package fsa.
1085s Preparing to unpack .../104-fsa_1.15.9+dfsg-6_arm64.deb ...
1085s Unpacking fsa (1.15.9+dfsg-6) ...
1085s Selecting previously unselected package libgs-common.
1085s Preparing to unpack .../105-libgs-common_10.02.1~dfsg1-0ubuntu2_all.deb ...
1085s Unpacking libgs-common (10.02.1~dfsg1-0ubuntu2) ...
1086s Selecting previously unselected package libgs10-common.
1086s Preparing to unpack .../106-libgs10-common_10.02.1~dfsg1-0ubuntu2_all.deb ...
1086s Unpacking libgs10-common (10.02.1~dfsg1-0ubuntu2) ...
1086s Selecting previously unselected package libidn12:arm64.
1086s Preparing to unpack .../107-libidn12_1.42-1_arm64.deb ...
1086s Unpacking libidn12:arm64 (1.42-1) ...
1086s Selecting previously unselected package libijs-0.35:arm64.
1086s Preparing to unpack .../108-libijs-0.35_0.35-15.1_arm64.deb ...
1086s Unpacking libijs-0.35:arm64 (0.35-15.1) ...
1086s Selecting previously unselected package libjbig2dec0:arm64.
1086s Preparing to unpack .../109-libjbig2dec0_0.20-1_arm64.deb ...
1086s Unpacking libjbig2dec0:arm64 (0.20-1) ...
1086s Selecting previously unselected package libopenjp2-7:arm64.
1086s Preparing to unpack .../110-libopenjp2-7_2.5.0-2_arm64.deb ...
1086s Unpacking libopenjp2-7:arm64 (2.5.0-2) ...
1086s Selecting previously unselected package libpaper1:arm64.
1086s Preparing to unpack .../111-libpaper1_1.1.29_arm64.deb ...
1086s Unpacking libpaper1:arm64 (1.1.29) ...
1086s Selecting previously unselected package libice6:arm64.
1086s Preparing to unpack .../112-libice6_2%3a1.0.10-1build2_arm64.deb ...
1086s Unpacking libice6:arm64 (2:1.0.10-1build2) ...
1086s Selecting previously unselected package libsm6:arm64.
1086s Preparing to unpack .../113-libsm6_2%3a1.2.3-1build2_arm64.deb ...
1086s Unpacking libsm6:arm64 (2:1.2.3-1build2) ...
1086s Selecting previously unselected package libxt6:arm64.
1086s Preparing to unpack .../114-libxt6_1%3a1.2.1-1.1_arm64.deb ...
1086s Unpacking libxt6:arm64 (1:1.2.1-1.1) ...
1086s Selecting previously unselected package libgs10:arm64.
1086s Preparing to unpack .../115-libgs10_10.02.1~dfsg1-0ubuntu2_arm64.deb ...
1086s Unpacking libgs10:arm64 (10.02.1~dfsg1-0ubuntu2) ...
1086s Selecting previously unselected package ghostscript.
1086s Preparing to unpack .../116-ghostscript_10.02.1~dfsg1-0ubuntu2_arm64.deb ...
1086s Unpacking ghostscript (10.02.1~dfsg1-0ubuntu2) ...
1086s Selecting previously unselected package libann0.
1086s Preparing to unpack .../117-libann0_1.1.2+doc-9_arm64.deb ...
1086s Unpacking libann0 (1.1.2+doc-9) ...
1086s Selecting previously unselected package libcdt5:arm64.
1086s Preparing to unpack .../118-libcdt5_2.42.2-8build1_arm64.deb ...
1086s Unpacking libcdt5:arm64 (2.42.2-8build1) ...
1086s Selecting previously unselected package libcgraph6:arm64.
1086s Preparing to unpack .../119-libcgraph6_2.42.2-8build1_arm64.deb ...
1086s Unpacking libcgraph6:arm64 (2.42.2-8build1) ...
1086s Selecting previously unselected package libgts-0.7-5:arm64.
1086s Preparing to unpack .../120-libgts-0.7-5_0.7.6+darcs121130-5_arm64.deb ...
1086s Unpacking libgts-0.7-5:arm64 (0.7.6+darcs121130-5) ...
1086s Selecting previously unselected package libpixman-1-0:arm64.
1086s Preparing to unpack .../121-libpixman-1-0_0.42.2-1_arm64.deb ...
1086s Unpacking libpixman-1-0:arm64 (0.42.2-1) ...
1086s Selecting previously unselected package libxcb-render0:arm64.
1087s Preparing to unpack .../122-libxcb-render0_1.15-1_arm64.deb ...
1087s Unpacking libxcb-render0:arm64 (1.15-1) ...
1087s Selecting previously unselected package libxcb-shm0:arm64.
1087s Preparing to unpack .../123-libxcb-shm0_1.15-1_arm64.deb ...
1087s Unpacking libxcb-shm0:arm64 (1.15-1) ...
1087s Selecting previously unselected package libxrender1:arm64.
1087s Preparing to unpack .../124-libxrender1_1%3a0.9.10-1.1_arm64.deb ...
1087s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ...
1087s Selecting previously unselected package libcairo2:arm64.
1087s Preparing to unpack .../125-libcairo2_1.18.0-1_arm64.deb ...
1087s Unpacking libcairo2:arm64 (1.18.0-1) ...
1087s Selecting previously unselected package libltdl7:arm64.
1087s Preparing to unpack .../126-libltdl7_2.4.7-7_arm64.deb ...
1087s Unpacking libltdl7:arm64 (2.4.7-7) ...
1087s Selecting previously unselected package libthai-data.
1087s Preparing to unpack .../127-libthai-data_0.1.29-2_all.deb ...
1087s Unpacking libthai-data (0.1.29-2) ...
1087s Selecting previously unselected package libdatrie1:arm64.
1087s Preparing to unpack .../128-libdatrie1_0.2.13-3_arm64.deb ...
1087s Unpacking libdatrie1:arm64 (0.2.13-3) ...
1087s Selecting previously unselected package libthai0:arm64.
1087s Preparing to unpack .../129-libthai0_0.1.29-2_arm64.deb ...
1087s Unpacking libthai0:arm64 (0.1.29-2) ...
1087s Selecting previously unselected package libpango-1.0-0:arm64.
1087s Preparing to unpack .../130-libpango-1.0-0_1.51.0+ds-4_arm64.deb ...
1087s Unpacking libpango-1.0-0:arm64 (1.51.0+ds-4) ...
1087s Selecting previously unselected package libpangoft2-1.0-0:arm64.
1087s Preparing to unpack .../131-libpangoft2-1.0-0_1.51.0+ds-4_arm64.deb ...
1087s Unpacking libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ...
1087s Selecting previously unselected package libpangocairo-1.0-0:arm64.
1087s Preparing to unpack .../132-libpangocairo-1.0-0_1.51.0+ds-4_arm64.deb ...
1087s Unpacking libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ...
1087s Selecting previously unselected package libpathplan4:arm64.
1087s Preparing to unpack .../133-libpathplan4_2.42.2-8build1_arm64.deb ...
1087s Unpacking libpathplan4:arm64 (2.42.2-8build1) ...
1087s Selecting previously unselected package libgvc6.
1087s Preparing to unpack .../134-libgvc6_2.42.2-8build1_arm64.deb ...
1087s Unpacking libgvc6 (2.42.2-8build1) ...
1087s Selecting previously unselected package libgvpr2:arm64.
1087s Preparing to unpack .../135-libgvpr2_2.42.2-8build1_arm64.deb ...
1087s Unpacking libgvpr2:arm64 (2.42.2-8build1) ...
1087s Selecting previously unselected package liblab-gamut1:arm64.
1087s Preparing to unpack .../136-liblab-gamut1_2.42.2-8build1_arm64.deb ...
1087s Unpacking liblab-gamut1:arm64 (2.42.2-8build1) ...
1087s Selecting previously unselected package libxmu6:arm64.
1087s Preparing to unpack .../137-libxmu6_2%3a1.1.3-3_arm64.deb ...
1087s Unpacking libxmu6:arm64 (2:1.1.3-3) ...
1087s Selecting previously unselected package libxaw7:arm64.
1087s Preparing to unpack .../138-libxaw7_2%3a1.0.14-1_arm64.deb ...
1087s Unpacking libxaw7:arm64 (2:1.0.14-1) ...
1087s Selecting previously unselected package graphviz.
1087s Preparing to unpack .../139-graphviz_2.42.2-8build1_arm64.deb ...
1087s Unpacking graphviz (2.42.2-8build1) ...
1087s Selecting previously unselected package infernal.
1087s Preparing to unpack .../140-infernal_1.1.5-2_arm64.deb ...
1087s Unpacking infernal (1.1.5-2) ...
1087s Selecting previously unselected package javascript-common.
1087s Preparing to unpack .../141-javascript-common_11+nmu1_all.deb ...
1087s Unpacking javascript-common (11+nmu1) ...
1087s Selecting previously unselected package kalign.
1087s Preparing to unpack .../142-kalign_1%3a3.3.5-1_arm64.deb ...
1087s Unpacking kalign (1:3.3.5-1) ...
1087s Selecting previously unselected package lagan.
1088s Preparing to unpack .../143-lagan_2.0-9_arm64.deb ...
1088s Unpacking lagan (2.0-9) ...
1088s Selecting previously unselected package liberror-perl.
1088s Preparing to unpack .../144-liberror-perl_0.17029-2_all.deb ...
1088s Unpacking liberror-perl (0.17029-2) ...
1088s Selecting previously unselected package libipc-sharelite-perl.
1088s Preparing to unpack .../145-libipc-sharelite-perl_0.17-5build1_arm64.deb ...
1088s Unpacking libipc-sharelite-perl (0.17-5build1) ...
1088s Selecting previously unselected package libcache-cache-perl.
1088s Preparing to unpack .../146-libcache-cache-perl_1.08-3_all.deb ...
1088s Unpacking libcache-cache-perl (1.08-3) ...
1088s Selecting previously unselected package libace-perl.
1088s Preparing to unpack .../147-libace-perl_1.92-11build3_arm64.deb ...
1088s Unpacking libace-perl (1.92-11build3) ...
1088s Selecting previously unselected package libalgorithm-diff-xs-perl:arm64.
1088s Preparing to unpack .../148-libalgorithm-diff-xs-perl_0.04-8build1_arm64.deb ...
1088s Unpacking libalgorithm-diff-xs-perl:arm64 (0.04-8build1) ...
1088s Selecting previously unselected package libalgorithm-munkres-perl.
1088s Preparing to unpack .../149-libalgorithm-munkres-perl_0.08-5_all.deb ...
1088s Unpacking libalgorithm-munkres-perl (0.08-5) ...
1088s Selecting previously unselected package libllvm17:arm64.
1088s Preparing to unpack .../150-libllvm17_1%3a17.0.6-5build1_arm64.deb ...
1088s Unpacking libllvm17:arm64 (1:17.0.6-5build1) ...
1089s Selecting previously unselected package libamd-comgr2:arm64.
1089s Preparing to unpack .../151-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3_arm64.deb ...
1089s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3) ...
1089s Selecting previously unselected package libdrm-amdgpu1:arm64.
1089s Preparing to unpack .../152-libdrm-amdgpu1_2.4.120-2_arm64.deb ...
1089s Unpacking libdrm-amdgpu1:arm64 (2.4.120-2) ...
1089s Selecting previously unselected package libhsakmt1:arm64.
1089s Preparing to unpack .../153-libhsakmt1_5.7.0-1_arm64.deb ...
1089s Unpacking libhsakmt1:arm64 (5.7.0-1) ...
1089s Selecting previously unselected package libhsa-runtime64-1.
1089s Preparing to unpack .../154-libhsa-runtime64-1_5.7.1-1_arm64.deb ...
1089s Unpacking libhsa-runtime64-1 (5.7.1-1) ...
1089s Selecting previously unselected package libamdhip64-5.
1089s Preparing to unpack .../155-libamdhip64-5_5.2.3-12_arm64.deb ...
1089s Unpacking libamdhip64-5 (5.2.3-12) ...
1089s Selecting previously unselected package libapache2-reload-perl.
1090s Preparing to unpack .../156-libapache2-reload-perl_0.14-1_all.deb ...
1090s Unpacking libapache2-reload-perl (0.14-1) ...
1090s Selecting previously unselected package libclass-method-modifiers-perl.
1090s Preparing to unpack .../157-libclass-method-modifiers-perl_2.15-1_all.deb ...
1090s Unpacking libclass-method-modifiers-perl (2.15-1) ...
1090s Selecting previously unselected package libclass-xsaccessor-perl.
1090s Preparing to unpack .../158-libclass-xsaccessor-perl_1.19-4build2_arm64.deb ...
1090s Unpacking libclass-xsaccessor-perl (1.19-4build2) ...
1090s Selecting previously unselected package libb-hooks-op-check-perl:arm64.
1090s Preparing to unpack .../159-libb-hooks-op-check-perl_0.22-2build2_arm64.deb ...
1090s Unpacking libb-hooks-op-check-perl:arm64 (0.22-2build2) ...
1090s Selecting previously unselected package libdynaloader-functions-perl.
1090s Preparing to unpack .../160-libdynaloader-functions-perl_0.003-3_all.deb ...
1090s Unpacking libdynaloader-functions-perl (0.003-3) ...
1090s Selecting previously unselected package libdevel-callchecker-perl:arm64.
1090s Preparing to unpack .../161-libdevel-callchecker-perl_0.008-2build1_arm64.deb ...
1090s Unpacking libdevel-callchecker-perl:arm64 (0.008-2build1) ...
1090s Selecting previously unselected package libparams-classify-perl:arm64.
1090s Preparing to unpack .../162-libparams-classify-perl_0.015-2build3_arm64.deb ...
1090s Unpacking libparams-classify-perl:arm64 (0.015-2build3) ...
1090s Selecting previously unselected package libmodule-runtime-perl.
1090s Preparing to unpack .../163-libmodule-runtime-perl_0.016-2_all.deb ...
1090s Unpacking libmodule-runtime-perl (0.016-2) ...
1090s Selecting previously unselected package libimport-into-perl.
1090s Preparing to unpack .../164-libimport-into-perl_1.002005-2_all.deb ...
1090s Unpacking libimport-into-perl (1.002005-2) ...
1090s Selecting previously unselected package librole-tiny-perl.
1090s Preparing to unpack .../165-librole-tiny-perl_2.002004-1_all.deb ...
1090s Unpacking librole-tiny-perl (2.002004-1) ...
1090s Selecting previously unselected package libsub-quote-perl.
1090s Preparing to unpack .../166-libsub-quote-perl_2.006008-1ubuntu1_all.deb ...
1090s Unpacking libsub-quote-perl (2.006008-1ubuntu1) ...
1090s Selecting previously unselected package libmoo-perl.
1090s Preparing to unpack .../167-libmoo-perl_2.005005-1_all.deb ...
1090s Unpacking libmoo-perl (2.005005-1) ...
1090s Selecting previously unselected package libtype-tiny-perl.
1090s Preparing to unpack .../168-libtype-tiny-perl_2.004000-1_all.deb ...
1090s Unpacking libtype-tiny-perl (2.004000-1) ...
1090s Selecting previously unselected package libarray-compare-perl.
1090s Preparing to unpack .../169-libarray-compare-perl_3.0.8-1_all.deb ...
1090s Unpacking libarray-compare-perl (3.0.8-1) ...
1090s Selecting previously unselected package libasync-interrupt-perl.
1090s Preparing to unpack .../170-libasync-interrupt-perl_1.26-1build4_arm64.deb ...
1090s Unpacking libasync-interrupt-perl (1.26-1build4) ...
1090s Selecting previously unselected package libatomic1:arm64.
1090s Preparing to unpack .../171-libatomic1_14-20240303-1ubuntu1_arm64.deb ...
1090s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ...
1090s Selecting previously unselected package libmodule-implementation-perl.
1090s Preparing to unpack .../172-libmodule-implementation-perl_0.09-2_all.deb ...
1090s Unpacking libmodule-implementation-perl (0.09-2) ...
1090s Selecting previously unselected package libsub-exporter-progressive-perl.
1090s Preparing to unpack .../173-libsub-exporter-progressive-perl_0.001013-3_all.deb ...
1090s Unpacking libsub-exporter-progressive-perl (0.001013-3) ...
1090s Selecting previously unselected package libvariable-magic-perl.
1090s Preparing to unpack .../174-libvariable-magic-perl_0.63-1build1_arm64.deb ...
1090s Unpacking libvariable-magic-perl (0.63-1build1) ...
1090s Selecting previously unselected package libb-hooks-endofscope-perl.
1090s Preparing to unpack .../175-libb-hooks-endofscope-perl_0.28-1_all.deb ...
1090s Unpacking libb-hooks-endofscope-perl (0.28-1) ...
1090s Selecting previously unselected package libberkeleydb-perl:arm64.
1090s Preparing to unpack .../176-libberkeleydb-perl_0.64-2build1_arm64.deb ...
1090s Unpacking libberkeleydb-perl:arm64 (0.64-2build1) ...
1090s Selecting previously unselected package libhtscodecs2:arm64.
1090s Preparing to unpack .../177-libhtscodecs2_1.6.0-1_arm64.deb ...
1090s Unpacking libhtscodecs2:arm64 (1.6.0-1) ...
1090s Selecting previously unselected package libstaden-read14:arm64.
1090s Preparing to unpack .../178-libstaden-read14_1.15.0-1_arm64.deb ...
1090s Unpacking libstaden-read14:arm64 (1.15.0-1) ...
1090s Selecting previously unselected package libbio-scf-perl.
1090s Preparing to unpack .../179-libbio-scf-perl_1.03-6build1_arm64.deb ...
1090s Unpacking libbio-scf-perl (1.03-6build1) ...
1090s Selecting previously unselected package libcarp-clan-perl.
1090s Preparing to unpack .../180-libcarp-clan-perl_6.08-2_all.deb ...
1090s Unpacking libcarp-clan-perl (6.08-2) ...
1090s Selecting previously unselected package libbit-vector-perl:arm64.
1091s Preparing to unpack .../181-libbit-vector-perl_7.4-2build2_arm64.deb ...
1091s Unpacking libbit-vector-perl:arm64 (7.4-2build2) ...
1091s Selecting previously unselected package libcgi-fast-perl.
1091s Preparing to unpack .../182-libcgi-fast-perl_1%3a2.17-1_all.deb ...
1091s Unpacking libcgi-fast-perl (1:2.17-1) ...
1091s Selecting previously unselected package libconvert-binary-c-perl.
1091s Preparing to unpack .../183-libconvert-binary-c-perl_0.84-1build3_arm64.deb ...
1091s Unpacking libconvert-binary-c-perl (0.84-1build3) ...
1091s Selecting previously unselected package libcrypt-rc4-perl.
1091s Preparing to unpack .../184-libcrypt-rc4-perl_2.02-5_all.deb ...
1091s Unpacking libcrypt-rc4-perl (2.02-5) ...
1091s Selecting previously unselected package libdata-dump-perl.
1091s Preparing to unpack .../185-libdata-dump-perl_1.25-1_all.deb ...
1091s Unpacking libdata-dump-perl (1.25-1) ...
1091s Selecting previously unselected package libdate-calc-perl.
1091s Preparing to unpack .../186-libdate-calc-perl_6.4-2_all.deb ...
1091s Unpacking libdate-calc-perl (6.4-2) ...
1091s Selecting previously unselected package libdate-calc-xs-perl:arm64.
1091s Preparing to unpack .../187-libdate-calc-xs-perl_6.4-2build2_arm64.deb ...
1091s Unpacking libdate-calc-xs-perl:arm64 (6.4-2build2) ...
1091s Selecting previously unselected package libdate-manip-perl.
1091s Preparing to unpack .../188-libdate-manip-perl_6.95-1_all.deb ...
1091s Unpacking libdate-manip-perl (6.95-1) ...
1091s Selecting previously unselected package libdbd-mysql-perl:arm64.
1091s Preparing to unpack .../189-libdbd-mysql-perl_4.050-5ubuntu2_arm64.deb ...
1091s Unpacking libdbd-mysql-perl:arm64 (4.050-5ubuntu2) ...
1091s Selecting previously unselected package libdigest-perl-md5-perl.
1091s Preparing to unpack .../190-libdigest-perl-md5-perl_1.9-5_all.deb ...
1091s Unpacking libdigest-perl-md5-perl (1.9-5) ...
1091s Selecting previously unselected package libdivsufsort3:arm64.
1091s Preparing to unpack .../191-libdivsufsort3_2.0.1-6_arm64.deb ...
1091s Unpacking libdivsufsort3:arm64 (2.0.1-6) ...
1091s Selecting previously unselected package libev-perl:arm64.
1091s Preparing to unpack .../192-libev-perl_4.34-1build1_arm64.deb ...
1091s Unpacking libev-perl:arm64 (4.34-1build1) ...
1091s Selecting previously unselected package libevent-pthreads-2.1-7:arm64.
1091s Preparing to unpack .../193-libevent-pthreads-2.1-7_2.1.12-stable-9_arm64.deb ...
1091s Unpacking libevent-pthreads-2.1-7:arm64 (2.1.12-stable-9) ...
1091s Selecting previously unselected package librdmacm1t64:arm64.
1091s Preparing to unpack .../194-librdmacm1t64_50.0-2_arm64.deb ...
1091s Unpacking librdmacm1t64:arm64 (50.0-2) ...
1091s Selecting previously unselected package libfabric1:arm64.
1091s Preparing to unpack .../195-libfabric1_1.17.0-3_arm64.deb ...
1091s Unpacking libfabric1:arm64 (1.17.0-3) ...
1092s Selecting previously unselected package libfcgi-bin.
1092s Preparing to unpack .../196-libfcgi-bin_2.4.2-2build2_arm64.deb ...
1092s Unpacking libfcgi-bin (2.4.2-2build2) ...
1092s Selecting previously unselected package libfont-afm-perl.
1092s Preparing to unpack .../197-libfont-afm-perl_1.20-4_all.deb ...
1092s Unpacking libfont-afm-perl (1.20-4) ...
1092s Selecting previously unselected package libfreezethaw-perl.
1092s Preparing to unpack .../198-libfreezethaw-perl_0.5001-3_all.deb ...
1092s Unpacking libfreezethaw-perl (0.5001-3) ...
1092s Selecting previously unselected package libsvg-perl.
1092s Preparing to unpack .../199-libsvg-perl_2.87-1_all.deb ...
1092s Unpacking libsvg-perl (2.87-1) ...
1092s Selecting previously unselected package libgd-svg-perl.
1092s Preparing to unpack .../200-libgd-svg-perl_0.33-3_all.deb ...
1092s Unpacking libgd-svg-perl (0.33-3) ...
1092s Selecting previously unselected package libgfortran5:arm64.
1092s Preparing to unpack .../201-libgfortran5_14-20240303-1ubuntu1_arm64.deb ...
1092s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ...
1092s Selecting previously unselected package libheap-perl.
1092s Preparing to unpack .../202-libheap-perl_0.80-5_all.deb ...
1092s Unpacking libheap-perl (0.80-5) ...
1092s Selecting previously unselected package libset-object-perl.
1092s Preparing to unpack .../203-libset-object-perl_1.42-1build3_arm64.deb ...
1092s Unpacking libset-object-perl (1.42-1build3) ...
1092s Selecting previously unselected package libgraph-perl.
1093s Preparing to unpack .../204-libgraph-perl_1%3a0.9727-1_all.deb ...
1093s Unpacking libgraph-perl (1:0.9727-1) ...
1093s Selecting previously unselected package libparse-recdescent-perl.
1093s Preparing to unpack .../205-libparse-recdescent-perl_1.967015+dfsg-4_all.deb ...
1093s Unpacking libparse-recdescent-perl (1.967015+dfsg-4) ...
1093s Selecting previously unselected package libxml-xpath-perl.
1093s Preparing to unpack .../206-libxml-xpath-perl_1.48-1_all.deb ...
1093s Unpacking libxml-xpath-perl (1.48-1) ...
1093s Selecting previously unselected package libgraphviz-perl.
1093s Preparing to unpack .../207-libgraphviz-perl_2.24-1_all.deb ...
1093s Unpacking libgraphviz-perl (2.24-1) ...
1093s Selecting previously unselected package libgts-bin.
1093s Preparing to unpack .../208-libgts-bin_0.7.6+darcs121130-5_arm64.deb ...
1093s Unpacking libgts-bin (0.7.6+darcs121130-5) ...
1093s Selecting previously unselected package libguard-perl.
1093s Preparing to unpack .../209-libguard-perl_1.023-2build2_arm64.deb ...
1093s Unpacking libguard-perl (1.023-2build2) ...
1093s Selecting previously unselected package libhtml-form-perl.
1093s Preparing to unpack .../210-libhtml-form-perl_6.11-1_all.deb ...
1093s Unpacking libhtml-form-perl (6.11-1) ...
1093s Selecting previously unselected package libhtml-format-perl.
1093s Preparing to unpack .../211-libhtml-format-perl_2.16-2_all.deb ...
1093s Unpacking libhtml-format-perl (2.16-2) ...
1093s Selecting previously unselected package libhtml-tableextract-perl.
1093s Preparing to unpack .../212-libhtml-tableextract-perl_2.15-2_all.deb ...
1093s Unpacking libhtml-tableextract-perl (2.15-2) ...
1093s Selecting previously unselected package libhts3:arm64.
1093s Preparing to unpack .../213-libhts3_1.18+ds-1_arm64.deb ...
1093s Unpacking libhts3:arm64 (1.18+ds-1) ...
1093s Selecting previously unselected package libhwloc15:arm64.
1093s Preparing to unpack .../214-libhwloc15_2.10.0-1_arm64.deb ...
1093s Unpacking libhwloc15:arm64 (2.10.0-1) ...
1093s Selecting previously unselected package libjcode-pm-perl.
1093s Preparing to unpack .../215-libjcode-pm-perl_2.06-1.1_arm64.deb ...
1093s Unpacking libjcode-pm-perl (2.06-1.1) ...
1093s Selecting previously unselected package libjs-jquery.
1094s Preparing to unpack .../216-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
1094s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
1094s Selecting previously unselected package libtypes-serialiser-perl.
1094s Preparing to unpack .../217-libtypes-serialiser-perl_1.01-1_all.deb ...
1094s Unpacking libtypes-serialiser-perl (1.01-1) ...
1094s Selecting previously unselected package libjson-xs-perl.
1094s Preparing to unpack .../218-libjson-xs-perl_4.030-2build1_arm64.deb ...
1094s Unpacking libjson-xs-perl (4.030-2build1) ...
1094s Selecting previously unselected package libmath-derivative-perl.
1094s Preparing to unpack .../219-libmath-derivative-perl_1.01-3_all.deb ...
1094s Unpacking libmath-derivative-perl (1.01-3) ...
1094s Selecting previously unselected package libmath-spline-perl.
1094s Preparing to unpack .../220-libmath-spline-perl_0.02-4_all.deb ...
1094s Unpacking libmath-spline-perl (0.02-4) ...
1094s Selecting previously unselected package libmbedcrypto7:arm64.
1094s Preparing to unpack .../221-libmbedcrypto7_2.28.7-1ubuntu1_arm64.deb ...
1094s Unpacking libmbedcrypto7:arm64 (2.28.7-1ubuntu1) ...
1094s Selecting previously unselected package libmbedx509-1:arm64.
1094s Preparing to unpack .../222-libmbedx509-1_2.28.7-1ubuntu1_arm64.deb ...
1094s Unpacking libmbedx509-1:arm64 (2.28.7-1ubuntu1) ...
1094s Selecting previously unselected package libmbedtls14:arm64.
1094s Preparing to unpack .../223-libmbedtls14_2.28.7-1ubuntu1_arm64.deb ...
1094s Unpacking libmbedtls14:arm64 (2.28.7-1ubuntu1) ...
1094s Selecting previously unselected package libmldbm-perl.
1094s Preparing to unpack .../224-libmldbm-perl_2.05-4_all.deb ...
1094s Unpacking libmldbm-perl (2.05-4) ...
1094s Selecting previously unselected package libpackage-stash-perl.
1094s Preparing to unpack .../225-libpackage-stash-perl_0.40-1_all.deb ...
1094s Unpacking libpackage-stash-perl (0.40-1) ...
1094s Selecting previously unselected package libsub-identify-perl.
1094s Preparing to unpack .../226-libsub-identify-perl_0.14-3build1_arm64.deb ...
1094s Unpacking libsub-identify-perl (0.14-3build1) ...
1094s Selecting previously unselected package libsub-name-perl:arm64.
1094s Preparing to unpack .../227-libsub-name-perl_0.27-1build1_arm64.deb ...
1094s Unpacking libsub-name-perl:arm64 (0.27-1build1) ...
1094s Selecting previously unselected package libnamespace-clean-perl.
1094s Preparing to unpack .../228-libnamespace-clean-perl_0.27-2_all.deb ...
1094s Unpacking libnamespace-clean-perl (0.27-2) ...
1094s Selecting previously unselected package libole-storage-lite-perl.
1094s Preparing to unpack .../229-libole-storage-lite-perl_0.22-1_all.deb ...
1094s Unpacking libole-storage-lite-perl (0.22-1) ...
1094s Selecting previously unselected package libmunge2:arm64.
1094s Preparing to unpack .../230-libmunge2_0.5.15-3ubuntu1_arm64.deb ...
1094s Unpacking libmunge2:arm64 (0.5.15-3ubuntu1) ...
1094s Selecting previously unselected package libpciaccess0:arm64.
1094s Preparing to unpack .../231-libpciaccess0_0.17-3_arm64.deb ...
1094s Unpacking libpciaccess0:arm64 (0.17-3) ...
1094s Selecting previously unselected package libxnvctrl0:arm64.
1094s Preparing to unpack .../232-libxnvctrl0_510.47.03-0ubuntu1_arm64.deb ...
1094s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu1) ...
1094s Selecting previously unselected package ocl-icd-libopencl1:arm64.
1094s Preparing to unpack .../233-ocl-icd-libopencl1_2.3.2-1_arm64.deb ...
1094s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1) ...
1094s Selecting previously unselected package libhwloc-plugins:arm64.
1094s Preparing to unpack .../234-libhwloc-plugins_2.10.0-1_arm64.deb ...
1094s Unpacking libhwloc-plugins:arm64 (2.10.0-1) ...
1094s Selecting previously unselected package libpmix2:arm64.
1094s Preparing to unpack .../235-libpmix2_5.0.1-4_arm64.deb ...
1094s Unpacking libpmix2:arm64 (5.0.1-4) ...
1094s Selecting previously unselected package libucx0:arm64.
1094s Preparing to unpack .../236-libucx0_1.16.0+ds-4_arm64.deb ...
1094s Unpacking libucx0:arm64 (1.16.0+ds-4) ...
1094s Selecting previously unselected package libopenmpi3:arm64.
1094s Preparing to unpack .../237-libopenmpi3_4.1.6-5ubuntu1_arm64.deb ...
1094s Unpacking libopenmpi3:arm64 (4.1.6-5ubuntu1) ...
1095s Selecting previously unselected package libpackage-stash-xs-perl:arm64.
1095s Preparing to unpack .../238-libpackage-stash-xs-perl_0.30-1build2_arm64.deb ...
1095s Unpacking libpackage-stash-xs-perl:arm64 (0.30-1build2) ...
1095s Selecting previously unselected package libpaper-utils.
1095s Preparing to unpack .../239-libpaper-utils_1.1.29_arm64.deb ...
1095s Unpacking libpaper-utils (1.1.29) ...
1095s Selecting previously unselected package libpostscript-perl.
1095s Preparing to unpack .../240-libpostscript-perl_0.06-3.1_all.deb ...
1095s Unpacking libpostscript-perl (0.06-3.1) ...
1095s Selecting previously unselected package libreadonly-perl.
1095s Preparing to unpack .../241-libreadonly-perl_2.050-3_all.deb ...
1095s Unpacking libreadonly-perl (2.050-3) ...
1095s Selecting previously unselected package libref-util-perl.
1095s Preparing to unpack .../242-libref-util-perl_0.204-2_all.deb ...
1095s Unpacking libref-util-perl (0.204-2) ...
1095s Selecting previously unselected package libref-util-xs-perl.
1095s Preparing to unpack .../243-libref-util-xs-perl_0.117-2build2_arm64.deb ...
1095s Unpacking libref-util-xs-perl (0.117-2build2) ...
1095s Selecting previously unselected package rubygems-integration.
1095s Preparing to unpack .../244-rubygems-integration_1.18_all.deb ...
1095s Unpacking rubygems-integration (1.18) ...
1095s Selecting previously unselected package ruby3.1.
1095s Preparing to unpack .../245-ruby3.1_3.1.2-7ubuntu4_arm64.deb ...
1095s Unpacking ruby3.1 (3.1.2-7ubuntu4) ...
1095s Selecting previously unselected package ruby-rubygems.
1095s Preparing to unpack .../246-ruby-rubygems_3.4.20-1_all.deb ...
1095s Unpacking ruby-rubygems (3.4.20-1) ...
1095s Selecting previously unselected package ruby.
1095s Preparing to unpack .../247-ruby_1%3a3.1+1_arm64.deb ...
1095s Unpacking ruby (1:3.1+1) ...
1095s Selecting previously unselected package rake.
1095s Preparing to unpack .../248-rake_13.0.6-3_all.deb ...
1095s Unpacking rake (13.0.6-3) ...
1095s Selecting previously unselected package ruby-net-telnet.
1095s Preparing to unpack .../249-ruby-net-telnet_0.2.0-1_all.deb ...
1095s Unpacking ruby-net-telnet (0.2.0-1) ...
1095s Selecting previously unselected package ruby-webrick.
1095s Preparing to unpack .../250-ruby-webrick_1.8.1-1_all.deb ...
1095s Unpacking ruby-webrick (1.8.1-1) ...
1095s Selecting previously unselected package ruby-xmlrpc.
1095s Preparing to unpack .../251-ruby-xmlrpc_0.3.2-2_all.deb ...
1095s Unpacking ruby-xmlrpc (0.3.2-2) ...
1095s Selecting previously unselected package ruby-sdbm:arm64.
1095s Preparing to unpack .../252-ruby-sdbm_1.0.0-5build3_arm64.deb ...
1095s Unpacking ruby-sdbm:arm64 (1.0.0-5build3) ...
1095s Selecting previously unselected package libruby3.1:arm64.
1095s Preparing to unpack .../253-libruby3.1_3.1.2-7ubuntu4_arm64.deb ...
1095s Unpacking libruby3.1:arm64 (3.1.2-7ubuntu4) ...
1096s Selecting previously unselected package libruby:arm64.
1096s Preparing to unpack .../254-libruby_1%3a3.1+1_arm64.deb ...
1096s Unpacking libruby:arm64 (1:3.1+1) ...
1096s Selecting previously unselected package libsort-naturally-perl.
1096s Preparing to unpack .../255-libsort-naturally-perl_1.03-4_all.deb ...
1096s Unpacking libsort-naturally-perl (1.03-4) ...
1096s Selecting previously unselected package libspreadsheet-writeexcel-perl.
1096s Preparing to unpack .../256-libspreadsheet-writeexcel-perl_2.40-4_all.deb ...
1096s Unpacking libspreadsheet-writeexcel-perl (2.40-4) ...
1096s Selecting previously unselected package libunicode-map-perl.
1096s Preparing to unpack .../257-libunicode-map-perl_0.112-13build2_arm64.deb ...
1096s Unpacking libunicode-map-perl (0.112-13build2) ...
1096s Selecting previously unselected package libspreadsheet-parseexcel-perl.
1096s Preparing to unpack .../258-libspreadsheet-parseexcel-perl_0.6600-1_all.deb ...
1096s Unpacking libspreadsheet-parseexcel-perl (0.6600-1) ...
1096s Selecting previously unselected package libsvg-graph-perl.
1096s Preparing to unpack .../259-libsvg-graph-perl_0.02-4_all.deb ...
1096s Unpacking libsvg-graph-perl (0.02-4) ...
1096s Selecting previously unselected package libtext-csv-xs-perl:arm64.
1096s Preparing to unpack .../260-libtext-csv-xs-perl_1.53-1build1_arm64.deb ...
1096s Unpacking libtext-csv-xs-perl:arm64 (1.53-1build1) ...
1096s Selecting previously unselected package libtie-ixhash-perl.
1096s Preparing to unpack .../261-libtie-ixhash-perl_1.23-4_all.deb ...
1096s Unpacking libtie-ixhash-perl (1.23-4) ...
1096s Selecting previously unselected package libtype-tiny-xs-perl:arm64.
1097s Preparing to unpack .../262-libtype-tiny-xs-perl_0.025-1build1_arm64.deb ...
1097s Unpacking libtype-tiny-xs-perl:arm64 (0.025-1build1) ...
1097s Selecting previously unselected package libxft2:arm64.
1097s Preparing to unpack .../263-libxft2_2.3.6-1_arm64.deb ...
1097s Unpacking libxft2:arm64 (2.3.6-1) ...
1097s Selecting previously unselected package libxml-filter-buffertext-perl.
1097s Preparing to unpack .../264-libxml-filter-buffertext-perl_1.01-7_all.deb ...
1097s Unpacking libxml-filter-buffertext-perl (1.01-7) ...
1097s Selecting previously unselected package libxslt1.1:arm64.
1097s Preparing to unpack .../265-libxslt1.1_1.1.35-1_arm64.deb ...
1097s Unpacking libxslt1.1:arm64 (1.1.35-1) ...
1097s Selecting previously unselected package libxml-libxslt-perl:arm64.
1097s Preparing to unpack .../266-libxml-libxslt-perl_2.002001-1build1_arm64.deb ...
1097s Unpacking libxml-libxslt-perl:arm64 (2.002001-1build1) ...
1097s Selecting previously unselected package libxml-sax-writer-perl.
1097s Preparing to unpack .../267-libxml-sax-writer-perl_0.57-2_all.deb ...
1097s Unpacking libxml-sax-writer-perl (0.57-2) ...
1097s Selecting previously unselected package libxmlrpc-lite-perl.
1097s Preparing to unpack .../268-libxmlrpc-lite-perl_0.717-5_all.deb ...
1097s Unpacking libxmlrpc-lite-perl (0.717-5) ...
1097s Selecting previously unselected package libyaml-libyaml-perl.
1097s Preparing to unpack .../269-libyaml-libyaml-perl_0.89+ds-1_arm64.deb ...
1097s Unpacking libyaml-libyaml-perl (0.89+ds-1) ...
1097s Selecting previously unselected package libyaml-perl.
1097s Preparing to unpack .../270-libyaml-perl_1.31-1_all.deb ...
1097s Unpacking libyaml-perl (1.31-1) ...
1097s Selecting previously unselected package lynx-common.
1097s Preparing to unpack .../271-lynx-common_2.9.0rel.0-2_all.deb ...
1097s Unpacking lynx-common (2.9.0rel.0-2) ...
1097s Selecting previously unselected package mafft.
1098s Preparing to unpack .../272-mafft_7.505-1_arm64.deb ...
1098s Unpacking mafft (7.505-1) ...
1098s Selecting previously unselected package mailcap.
1098s Preparing to unpack .../273-mailcap_3.70+nmu1ubuntu1_all.deb ...
1098s Unpacking mailcap (3.70+nmu1ubuntu1) ...
1098s Selecting previously unselected package maq.
1098s Preparing to unpack .../274-maq_0.7.1-9_arm64.deb ...
1098s Unpacking maq (0.7.1-9) ...
1098s Selecting previously unselected package muscle.
1098s Preparing to unpack .../275-muscle_1%3a5.1.0-1_arm64.deb ...
1098s Unpacking muscle (1:5.1.0-1) ...
1098s Selecting previously unselected package mustang.
1098s Preparing to unpack .../276-mustang_3.2.4-1_arm64.deb ...
1098s Unpacking mustang (3.2.4-1) ...
1098s Selecting previously unselected package ncbi-data.
1098s Preparing to unpack .../277-ncbi-data_6.1.20170106+dfsg1-10_all.deb ...
1098s Unpacking ncbi-data (6.1.20170106+dfsg1-10) ...
1098s Selecting previously unselected package ncbi-blast+.
1098s Preparing to unpack .../278-ncbi-blast+_2.12.0+ds-4_arm64.deb ...
1098s Unpacking ncbi-blast+ (2.12.0+ds-4) ...
1099s Selecting previously unselected package ncbi-blast+-legacy.
1099s Preparing to unpack .../279-ncbi-blast+-legacy_2.12.0+ds-4_all.deb ...
1099s Unpacking ncbi-blast+-legacy (2.12.0+ds-4) ...
1099s Selecting previously unselected package ncoils.
1099s Preparing to unpack .../280-ncoils_2002-9_arm64.deb ...
1099s Unpacking ncoils (2002-9) ...
1099s Selecting previously unselected package openmpi-common.
1099s Preparing to unpack .../281-openmpi-common_4.1.6-5ubuntu1_all.deb ...
1099s Unpacking openmpi-common (4.1.6-5ubuntu1) ...
1099s Selecting previously unselected package openmpi-bin.
1099s Preparing to unpack .../282-openmpi-bin_4.1.6-5ubuntu1_arm64.deb ...
1099s Unpacking openmpi-bin (4.1.6-5ubuntu1) ...
1099s Selecting previously unselected package pal2nal.
1099s Preparing to unpack .../283-pal2nal_14.1-3_all.deb ...
1099s Unpacking pal2nal (14.1-3) ...
1099s Selecting previously unselected package perl-doc.
1099s Preparing to unpack .../284-perl-doc_5.38.2-3_all.deb ...
1099s Adding 'diversion of /usr/bin/perldoc to /usr/bin/perldoc.stub by perl-doc'
1099s Unpacking perl-doc (5.38.2-3) ...
1099s Selecting previously unselected package perl-tk.
1099s Preparing to unpack .../285-perl-tk_1%3a804.036+dfsg1-1ubuntu1_arm64.deb ...
1099s Unpacking perl-tk (1:804.036+dfsg1-1ubuntu1) ...
1100s Selecting previously unselected package phylip.
1100s Preparing to unpack .../286-phylip_1%3a3.697+dfsg-3_arm64.deb ...
1100s Unpacking phylip (1:3.697+dfsg-3) ...
1100s Selecting previously unselected package phyml.
1100s Preparing to unpack .../287-phyml_3%3a3.3.20220408-3_arm64.deb ...
1100s Unpacking phyml (3:3.3.20220408-3) ...
1100s Selecting previously unselected package poa.
1100s Preparing to unpack .../288-poa_2.0+20060928-8_arm64.deb ...
1100s Unpacking poa (2.0+20060928-8) ...
1100s Selecting previously unselected package prank.
1100s Preparing to unpack .../289-prank_0.0.170427+dfsg-3_arm64.deb ...
1100s Unpacking prank (0.0.170427+dfsg-3) ...
1100s Selecting previously unselected package primer3.
1100s Preparing to unpack .../290-primer3_2.6.1-4_arm64.deb ...
1100s Unpacking primer3 (2.6.1-4) ...
1100s Selecting previously unselected package probalign.
1100s Preparing to unpack .../291-probalign_1.4-10_arm64.deb ...
1100s Unpacking probalign (1.4-10) ...
1100s Selecting previously unselected package probcons.
1100s Preparing to unpack .../292-probcons_1.12-14_arm64.deb ...
1100s Unpacking probcons (1.12-14) ...
1100s Selecting previously unselected package proda.
1100s Preparing to unpack .../293-proda_1.0-14_arm64.deb ...
1100s Unpacking proda (1.0-14) ...
1100s Selecting previously unselected package raxml.
1100s Preparing to unpack .../294-raxml_8.2.13+dfsg-1_arm64.deb ...
1100s Unpacking raxml (8.2.13+dfsg-1) ...
1100s Selecting previously unselected package samtools.
1100s Preparing to unpack .../295-samtools_1.19.2-1_arm64.deb ...
1100s Unpacking samtools (1.19.2-1) ...
1100s Selecting previously unselected package sim4.
1100s Preparing to unpack .../296-sim4_0.0.20121010-8_arm64.deb ...
1100s Unpacking sim4 (0.0.20121010-8) ...
1101s Selecting previously unselected package ssl-cert.
1101s Preparing to unpack .../297-ssl-cert_1.1.2ubuntu1_all.deb ...
1101s Unpacking ssl-cert (1.1.2ubuntu1) ...
1101s Selecting previously unselected package t-coffee.
1101s Preparing to unpack .../298-t-coffee_13.45.0.4846264+really13.41.0.28bdc39+dfsg-1_arm64.deb ...
1101s Unpacking t-coffee (13.45.0.4846264+really13.41.0.28bdc39+dfsg-1) ...
1101s Selecting previously unselected package tigr-glimmer.
1101s Preparing to unpack .../299-tigr-glimmer_3.02b-6_arm64.deb ...
1101s Unpacking tigr-glimmer (3.02b-6) ...
1101s Selecting previously unselected package tm-align.
1101s Preparing to unpack .../300-tm-align_20190822+dfsg-2build1_arm64.deb ...
1101s Unpacking tm-align (20190822+dfsg-2build1) ...
1101s Selecting previously unselected package unzip.
1101s Preparing to unpack .../301-unzip_6.0-28ubuntu3_arm64.deb ...
1101s Unpacking unzip (6.0-28ubuntu3) ...
1101s Selecting previously unselected package wise-data.
1101s Preparing to unpack .../302-wise-data_2.4.1-23_all.deb ...
1101s Unpacking wise-data (2.4.1-23) ...
1101s Selecting previously unselected package wise.
1101s Preparing to unpack .../303-wise_2.4.1-23_arm64.deb ...
1101s Unpacking wise (2.4.1-23) ...
1101s Selecting previously unselected package zip.
1101s Preparing to unpack .../304-zip_3.0-13_arm64.deb ...
1101s Unpacking zip (3.0-13) ...
1101s Selecting previously unselected package bowtie.
1101s Preparing to unpack .../305-bowtie_1.3.1-3_arm64.deb ...
1101s Unpacking bowtie (1.3.1-3) ...
1101s Selecting previously unselected package hmmer.
1101s Preparing to unpack .../306-hmmer_3.4+dfsg-2_arm64.deb ...
1101s Unpacking hmmer (3.4+dfsg-2) ...
1101s Selecting previously unselected package libauthen-sasl-perl.
1102s Preparing to unpack .../307-libauthen-sasl-perl_2.1700-1_all.deb ...
1102s Unpacking libauthen-sasl-perl (2.1700-1) ...
1102s Selecting previously unselected package libbsd-resource-perl.
1102s Preparing to unpack .../308-libbsd-resource-perl_1.2911-2build2_arm64.deb ...
1102s Unpacking libbsd-resource-perl (1.2911-2build2) ...
1102s Selecting previously unselected package libset-scalar-perl.
1102s Preparing to unpack .../309-libset-scalar-perl_1.29-3_all.deb ...
1102s Unpacking libset-scalar-perl (1.29-3) ...
1102s Selecting previously unselected package lynx.
1102s Preparing to unpack .../310-lynx_2.9.0rel.0-2_arm64.deb ...
1102s Unpacking lynx (2.9.0rel.0-2) ...
1102s Selecting previously unselected package med-config.
1102s Preparing to unpack .../311-med-config_3.8.1_all.deb ...
1102s Unpacking med-config (3.8.1) ...
1102s Selecting previously unselected package paml.
1102s Preparing to unpack .../312-paml_4.9j+dfsg-4_arm64.deb ...
1102s Unpacking paml (4.9j+dfsg-4) ...
1102s Setting up libhtscodecs2:arm64 (1.6.0-1) ...
1102s Setting up libanyevent-perl (7.170-2build4) ...
1102s Setting up libjcode-pm-perl (2.06-1.1) ...
1102s Setting up libio-sessiondata-perl (1.03-3) ...
1102s Setting up javascript-common (11+nmu1) ...
1102s Package apache2 is not configured yet. Will defer actions by package javascript-common.
1102s Setting up libgraphite2-3:arm64 (1.3.14-2) ...
1102s Setting up liblcms2-2:arm64 (2.14-2) ...
1102s Setting up ncbi-data (6.1.20170106+dfsg1-10) ...
1102s Setting up libberkeleydb-perl:arm64 (0.64-2build1) ...
1102s Setting up libpixman-1-0:arm64 (0.42.2-1) ...
1102s Setting up libstring-approx-perl (3.28-2build2) ...
1102s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ...
1102s Setting up libpaper1:arm64 (1.1.29) ...
1102s 
1102s Creating config file /etc/papersize with new version
1103s Setting up libpciaccess0:arm64 (0.17-3) ...
1103s Setting up mysql-common (5.8+1.1.0) ...
1103s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode
1103s Setting up libmysqlclient21:arm64 (8.0.36-1) ...
1103s Setting up libhpdf-2.3.0:arm64 (2.3.0+dfsg-1build1) ...
1103s Setting up libtie-ixhash-perl (1.23-4) ...
1103s Setting up libtask-weaken-perl (1.06-2) ...
1103s Setting up fonts-lato (2.015-1) ...
1103s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
1103s Setting up fonts-noto-mono (20201225-2) ...
1103s Setting up libxpm4:arm64 (1:3.5.17-1) ...
1103s Setting up libtest-requiresinternet-perl (0.05-4) ...
1103s Setting up libconvert-binary-c-perl (0.84-1build3) ...
1103s Setting up probcons (1.12-14) ...
1103s Setting up java-common (0.75+exp1) ...
1103s Setting up libclass-inspector-perl (1.36-3) ...
1103s Setting up libfont-afm-perl (1.20-4) ...
1103s Setting up bowtie (1.3.1-3) ...
1103s Setting up libxrender1:arm64 (1:0.9.10-1.1) ...
1103s Setting up libdynaloader-functions-perl (0.003-3) ...
1103s Setting up libdatrie1:arm64 (0.2.13-3) ...
1103s Setting up libfcgi0ldbl:arm64 (2.4.2-2build2) ...
1103s Setting up poa (2.0+20060928-8) ...
1103s Setting up libtest-deep-perl (1.204-1) ...
1103s Setting up libclass-method-modifiers-perl (2.15-1) ...
1103s Setting up libxml-regexp-perl (0.04-1.1) ...
1103s Setting up libref-util-xs-perl (0.117-2build2) ...
1103s Setting up libalgorithm-munkres-perl (0.08-5) ...
1103s Setting up libio-pty-perl (1:1.20-1) ...
1103s Setting up libxcb-render0:arm64 (1.15-1) ...
1103s Setting up mafft (7.505-1) ...
1103s Setting up libclone-perl:arm64 (0.46-1build1) ...
1103s Setting up libalgorithm-diff-perl (1.201-1) ...
1103s Setting up libsub-identify-perl (0.14-3build1) ...
1103s Setting up bwa (0.7.17-7) ...
1103s Setting up libio-stringy-perl (2.111-3) ...
1103s Setting up libhtml-tagset-perl (3.20-6) ...
1103s Setting up libijs-0.35:arm64 (0.35-15.1) ...
1103s Setting up libauthen-sasl-perl (2.1700-1) ...
1103s Setting up unzip (6.0-28ubuntu3) ...
1103s Setting up libgs-common (10.02.1~dfsg1-0ubuntu2) ...
1103s Setting up libfile-slurp-tiny-perl (0.004-2) ...
1103s Setting up libipc-sharelite-perl (0.17-5build1) ...
1103s Setting up libconvert-binhex-perl (1.125-3) ...
1103s Setting up libheap-perl (0.80-5) ...
1103s Setting up liblwp-mediatypes-perl (6.04-2) ...
1103s Setting up liblab-gamut1:arm64 (2.42.2-8build1) ...
1103s Setting up libyaml-libyaml-perl (0.89+ds-1) ...
1103s Setting up phylip (1:3.697+dfsg-3) ...
1103s Setting up libfcgi-bin (2.4.2-2build2) ...
1103s Setting up x11-common (1:7.7+23ubuntu2) ...
1103s Setting up libtry-tiny-perl (0.31-2) ...
1103s Setting up libpq5:arm64 (16.2-1) ...
1103s Setting up libdeflate0:arm64 (1.19-1) ...
1103s Setting up libapr1:arm64 (1.7.2-3) ...
1103s Setting up perl-openssl-defaults:arm64 (7) ...
1103s Setting up perl-doc (5.38.2-3) ...
1103s Setting up libcommon-sense-perl:arm64 (3.75-3build1) ...
1103s Setting up libmldbm-perl (2.05-4) ...
1103s Setting up libxml-namespacesupport-perl (1.12-2) ...
1103s Setting up libsvg-perl (2.87-1) ...
1103s Setting up libanyevent-http-perl (2.25-2) ...
1103s Setting up libbsd-resource-perl (1.2911-2build2) ...
1103s Setting up libencode-locale-perl (1.05-3) ...
1103s Setting up ncoils (2002-9) ...
1103s Setting up rubygems-integration (1.18) ...
1103s Setting up libxcb-shm0:arm64 (1.15-1) ...
1103s Setting up hyphy-common (2.5.59+dfsg-1) ...
1103s Setting up libpaper-utils (1.1.29) ...
1103s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ...
1103s Setting up muscle (1:5.1.0-1) ...
1103s Setting up emboss-data (6.6.0+dfsg-12ubuntu1) ...
1103s Setting up libyaml-perl (1.31-1) ...
1103s Setting up probalign (1.4-10) ...
1103s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ...
1103s Setting up t-coffee (13.45.0.4846264+really13.41.0.28bdc39+dfsg-1) ...
1103s Setting up poppler-data (0.4.12-1) ...
1103s Setting up libfreezethaw-perl (0.5001-3) ...
1103s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu1) ...
1103s Setting up liberror-perl (0.17029-2) ...
1103s Setting up libgts-0.7-5:arm64 (0.7.6+darcs121130-5) ...
1103s Setting up libdigest-perl-md5-perl (1.9-5) ...
1103s Setting up libasound2-data (1.2.10-3build1) ...
1103s Setting up infernal (1.1.5-2) ...
1103s Setting up libxml-sax-base-perl (1.09-3) ...
1103s Setting up libio-string-perl (1.08-4) ...
1103s Setting up libreadonly-perl (2.050-3) ...
1103s Setting up primer3 (2.6.1-4) ...
1103s Setting up libunicode-map-perl (0.112-13build2) ...
1103s Setting up zip (3.0-13) ...
1103s Setting up libfontenc1:arm64 (1:1.1.4-1build3) ...
1103s Setting up libpackage-stash-xs-perl:arm64 (0.30-1build2) ...
1103s Setting up kalign (1:3.3.5-1) ...
1103s Setting up libclass-data-inheritable-perl (0.08-3) ...
1103s Setting up dialign-tx-data (1.0.2-14) ...
1103s Setting up libset-object-perl (1.42-1build3) ...
1103s Setting up libmunge2:arm64 (0.5.15-3ubuntu1) ...
1103s Setting up lagan (2.0-9) ...
1103s Setting up mustang (3.2.4-1) ...
1103s Setting up libdata-dump-perl (1.25-1) ...
1103s Setting up libmbedcrypto7:arm64 (2.28.7-1ubuntu1) ...
1103s Setting up libtext-diff-perl (1.45-2) ...
1103s Setting up libref-util-perl (0.204-2) ...
1103s Setting up ssl-cert (1.1.2ubuntu1) ...
1104s Created symlink /etc/systemd/system/multi-user.target.wants/ssl-cert.service → /usr/lib/systemd/system/ssl-cert.service.

1104s Setting up libjbig2dec0:arm64 (0.20-1) ...
1104s Setting up gbrowse-data (2.56+dfsg-12build1) ...
1104s Setting up libxml-xpathengine-perl (0.14-2) ...
1104s Setting up proda (1.0-14) ...
1104s Setting up sim4 (0.0.20121010-8) ...
1104s Setting up libpathplan4:arm64 (2.42.2-8build1) ...
1104s Setting up libavahi-common-data:arm64 (0.8-13ubuntu2) ...
1104s Setting up libxml-writer-perl (0.900-2) ...
1104s Setting up libann0 (1.1.2+doc-9) ...
1104s Setting up ruby-net-telnet (0.2.0-1) ...
1104s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ...
1104s Setting up libanyevent-cachedns-perl (0.08-3) ...
1104s Setting up libencode-perl:arm64 (3.21-1) ...
1104s Setting up libcrypt-rc4-perl (2.02-5) ...
1104s Setting up fonts-dejavu-mono (2.37-8) ...
1104s Setting up libhwloc15:arm64 (2.10.0-1) ...
1104s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ...
1104s Setting up libvariable-magic-perl (0.63-1build1) ...
1104s Setting up libidn12:arm64 (1.42-1) ...
1104s Setting up libio-html-perl (1.004-3) ...
1104s Setting up libb-hooks-op-check-perl:arm64 (0.22-2build2) ...
1104s Setting up fonts-dejavu-core (2.37-8) ...
1104s Setting up libipc-run-perl (20231003.0-1) ...
1104s Setting up liblist-moreutils-xs-perl (0.430-3build3) ...
1104s Setting up libpcsclite1:arm64 (2.0.0-1) ...
1104s Setting up libmath-derivative-perl (1.01-3) ...
1104s Setting up wise-data (2.4.1-23) ...
1104s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
1104s Setting up libjs-prototype (1.7.3-1) ...
1104s Setting up lynx-common (2.9.0rel.0-2) ...
1104s Setting up amap-align (2.2+git20080214.600fc29+dfsg-2) ...
1104s Setting up libltdl7:arm64 (2.4.7-7) ...
1104s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ...
1104s Setting up libsub-exporter-progressive-perl (0.001013-3) ...
1104s Setting up libwebp7:arm64 (1.3.2-0.4) ...
1104s Setting up libcapture-tiny-perl (0.48-2) ...
1104s Setting up libtimedate-perl (2.3300-2) ...
1104s Setting up libset-scalar-perl (1.29-3) ...
1104s Setting up libreadline8t64:arm64 (8.2-3.1) ...
1104s Setting up ruby-webrick (1.8.1-1) ...
1104s Setting up libole-storage-lite-perl (0.22-1) ...
1104s Setting up libsub-name-perl:arm64 (0.27-1build1) ...
1104s Setting up libtype-tiny-xs-perl:arm64 (0.025-1build1) ...
1104s Setting up libtypes-serialiser-perl (1.01-1) ...
1104s Setting up libtree-dagnode-perl (1.32-1) ...
1104s Setting up alsa-topology-conf (1.2.5.1-2) ...
1104s Setting up libdata-stag-perl (0.14-3) ...
1104s Setting up libparse-recdescent-perl (1.967015+dfsg-4) ...
1104s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1) ...
1104s Setting up paml (4.9j+dfsg-4) ...
1104s Setting up dialign-tx (1.0.2-14) ...
1104s Setting up pal2nal (14.1-3) ...
1104s Setting up libjson-perl (4.10000-1) ...
1104s Setting up libasound2:arm64 (1.2.10-3build1) ...
1104s Setting up libxslt1.1:arm64 (1.1.35-1) ...
1104s Setting up fonts-liberation (1:2.1.5-3) ...
1104s Setting up mummer (3.23+dfsg-8) ...
1104s Setting up librole-tiny-perl (2.002004-1) ...
1104s Setting up openmpi-common (4.1.6-5ubuntu1) ...
1104s Setting up clustalw (2.1+lgpl-7) ...
1104s Setting up libfcgi-perl (0.82+ds-2build1) ...
1104s Setting up libsub-uplevel-perl (0.2800-3) ...
1104s Setting up librdmacm1t64:arm64 (50.0-2) ...
1104s Setting up liblua5.4-0:arm64 (5.4.6-3) ...
1104s Setting up libopenjp2-7:arm64 (2.5.0-2) ...
1104s Setting up libharfbuzz0b:arm64 (8.3.0-2) ...
1104s Setting up libthai-data (0.1.29-2) ...
1104s Setting up libcarp-clan-perl (6.08-2) ...
1104s Setting up libsub-quote-perl (2.006008-1ubuntu1) ...
1104s Setting up libdevel-stacktrace-perl (2.0500-1) ...
1104s Setting up libclass-xsaccessor-perl (1.19-4build2) ...
1104s Setting up libcdt5:arm64 (2.42.2-8build1) ...
1104s Setting up libcgraph6:arm64 (2.42.2-8build1) ...
1104s Setting up apache2-data (2.4.58-1ubuntu2) ...
1104s Setting up libdevel-symdump-perl (2.18-5) ...
1104s Setting up fonts-droid-fallback (1:6.0.1r16-1.1build1) ...
1104s Setting up libbio-perl-perl (1.7.8-1) ...
1104s Setting up lynx (2.9.0rel.0-2) ...
1104s update-alternatives: using /usr/bin/lynx to provide /usr/bin/www-browser (www-browser) in auto mode
1104s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
1104s Setting up ca-certificates-java (20240118) ...
1104s No JRE found. Skipping Java certificates setup.
1104s Setting up libexporter-tiny-perl (1.006002-1) ...
1104s Setting up fonts-liberation-sans-narrow (1:1.07.6-4) ...
1104s Setting up libterm-readkey-perl (2.38-2build2) ...
1104s Setting up menu (2.1.50) ...
1105s Setting up libstaden-read14:arm64 (1.15.0-1) ...
1105s Setting up libdivsufsort3:arm64 (2.0.1-6) ...
1105s Setting up libev-perl:arm64 (4.34-1build1) ...
1105s Setting up libllvm17:arm64 (1:17.0.6-5build1) ...
1105s Setting up tigr-glimmer (3.02b-6) ...
1105s Setting up mailcap (3.70+nmu1ubuntu1) ...
1105s Setting up libguard-perl (1.023-2build2) ...
1105s Setting up libpostscript-perl (0.06-3.1) ...
1105s Setting up dialign (2.2.1-11) ...
1105s Setting up libalgorithm-diff-xs-perl:arm64 (0.04-8build1) ...
1105s Setting up ruby-xmlrpc (0.3.2-2) ...
1105s Setting up libsort-naturally-perl (1.03-4) ...
1105s Setting up exonerate (2.4.0-5) ...
1105s Setting up bedtools (2.31.1+dfsg-2) ...
1105s Setting up liburi-perl (5.27-1) ...
1105s Setting up sqlite3 (3.45.1-1ubuntu1) ...
1105s Setting up libdbi-perl:arm64 (1.643-4build1) ...
1105s Setting up libdate-manip-perl (6.95-1) ...
1105s Setting up dctrl-tools (2.24-3build2) ...
1105s Setting up libfile-sort-perl (1.01-3) ...
1105s Setting up autodep8 (0.28) ...
1105s Setting up prank (0.0.170427+dfsg-3) ...
1105s Setting up libargtable2-0 (13-1.1) ...
1105s Setting up maq (0.7.1-9) ...
1105s Setting up libevent-pthreads-2.1-7:arm64 (2.1.12-stable-9) ...
1105s Setting up raxml (8.2.13+dfsg-1) ...
1105s Setting up libdrm-amdgpu1:arm64 (2.4.120-2) ...
1105s Setting up libtext-csv-perl (2.04-1) ...
1105s Setting up libaprutil1:arm64 (1.6.3-1ubuntu1) ...
1105s Setting up libasync-interrupt-perl (1.26-1build4) ...
1105s Setting up libnet-ssleay-perl:arm64 (1.94-1) ...
1105s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
1105s Setting up libmath-spline-perl (0.02-4) ...
1105s Setting up libbio-perl-run-perl (1.7.3-9) ...
1105s Setting up libjson-xs-perl (4.030-2build1) ...
1105s Setting up libfabric1:arm64 (1.17.0-3) ...
1105s Setting up libgts-bin (0.7.6+darcs121130-5) ...
1105s Setting up libice6:arm64 (2:1.0.10-1build2) ...
1105s Setting up libhttp-date-perl (6.06-1) ...
1105s Setting up libhts3:arm64 (1.18+ds-1) ...
1105s Setting up libfile-listing-perl (6.16-1) ...
1105s Setting up libmbedx509-1:arm64 (2.28.7-1ubuntu1) ...
1105s Setting up libcache-cache-perl (1.08-3) ...
1105s Setting up libmbedtls14:arm64 (2.28.7-1ubuntu1) ...
1105s Setting up alsa-ucm-conf (1.2.10-1ubuntu3) ...
1105s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
1105s Setting up libjs-scriptaculous (1.9.0-3) ...
1105s Setting up wise (2.4.1-23) ...
1105s Setting up liblist-moreutils-perl (0.430-2) ...
1105s Setting up libtest-warn-perl (0.37-2) ...
1105s Setting up libbio-scf-perl (1.03-6build1) ...
1105s Setting up libavahi-common3:arm64 (0.8-13ubuntu2) ...
1105s Setting up libtype-tiny-perl (2.004000-1) ...
1105s Setting up libtest-differences-perl (0.71-1) ...
1105s Setting up libnet-http-perl (6.23-1) ...
1105s Setting up libdbd-pg-perl (3.18.0-1build1) ...
1105s Setting up libtext-csv-xs-perl:arm64 (1.53-1build1) ...
1105s Setting up fsa (1.15.9+dfsg-6) ...
1105s Setting up libexception-class-perl (1.45-1) ...
1105s Setting up hyphy-pt (2.5.59+dfsg-1) ...
1105s Setting up clustalo (1.2.4-8) ...
1105s Setting up libaprutil1-ldap:arm64 (1.6.3-1ubuntu1) ...
1105s Setting up tm-align (20190822+dfsg-2build1) ...
1105s Setting up libgraph-perl (1:0.9727-1) ...
1105s Setting up xfonts-utils (1:7.7+6build2) ...
1105s Setting up libhwloc-plugins:arm64 (2.10.0-1) ...
1105s Setting up libaprutil1-dbd-sqlite3:arm64 (1.6.3-1ubuntu1) ...
1105s Setting up libdevel-callchecker-perl:arm64 (0.008-2build1) ...
1105s Setting up libxml-sax-perl (1.02+dfsg-3) ...
1105s update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
1105s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
1105s 
1105s Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
1105s Setting up libspreadsheet-writeexcel-perl (2.40-4) ...
1105s Setting up samtools (1.19.2-1) ...
1105s Setting up libbit-vector-perl:arm64 (7.4-2build2) ...
1105s Setting up ncbi-blast+ (2.12.0+ds-4) ...
1105s Setting up libbio-tools-run-alignment-clustalw-perl (1.7.4-3) ...
1105s Setting up libthai0:arm64 (0.1.29-2) ...
1105s Setting up libtest-exception-perl (0.43-3) ...
1105s Setting up fonts-liberation2 (1:2.1.5-3) ...
1105s Setting up libdbd-mysql-perl:arm64 (4.050-5ubuntu2) ...
1105s Setting up libxml-filter-buffertext-perl (1.01-7) ...
1105s Setting up libace-perl (1.92-11build3) ...
1105s Setting up pkg-perl-autopkgtest (0.77) ...
1105s Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1build2) ...
1105s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
1105s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
1105s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
1106s Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
1106s Setting up libspreadsheet-parseexcel-perl (0.6600-1) ...
1106s Setting up libwww-robotrules-perl (6.02-1) ...
1106s Setting up libgvpr2:arm64 (2.42.2-8build1) ...
1106s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
1106s Setting up libhtml-parser-perl:arm64 (3.81-1build1) ...
1106s Setting up hmmer (3.4+dfsg-2) ...
1106s Setting up libdbd-sqlite3-perl:arm64 (1.74-1build1) ...
1106s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3) ...
1106s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
1106s Setting up libsm6:arm64 (2:1.2.3-1build2) ...
1106s Setting up libavahi-client3:arm64 (0.8-13ubuntu2) ...
1106s Setting up libio-socket-ssl-perl (2.085-1) ...
1106s Setting up libhsakmt1:arm64 (5.7.0-1) ...
1106s Setting up libhttp-message-perl (6.45-1ubuntu1) ...
1106s Setting up apache2-utils (2.4.58-1ubuntu2) ...
1106s Setting up libhtml-form-perl (6.11-1) ...
1106s Setting up ncbi-blast+-legacy (2.12.0+ds-4) ...
1106s Setting up libxml-sax-writer-perl (0.57-2) ...
1106s Setting up libhttp-negotiate-perl (6.01-2) ...
1106s Setting up fontconfig (2.15.0-1ubuntu1) ...
1108s Regenerating fonts cache... done.
1108s Setting up libxft2:arm64 (2.3.6-1) ...
1108s Setting up libstatistics-descriptive-perl (3.0801-1) ...
1108s Setting up libdate-calc-perl (6.4-2) ...
1108s Setting up libpmix2:arm64 (5.0.1-4) ...
1108s Setting up perl-tk (1:804.036+dfsg1-1ubuntu1) ...
1108s Setting up libhttp-cookies-perl (6.11-1) ...
1108s Setting up libdate-calc-xs-perl:arm64 (6.4-2build2) ...
1108s Setting up libtest-most-perl (0.38-1) ...
1108s Setting up libhtml-tree-perl (5.07-3) ...
1108s Setting up libparams-classify-perl:arm64 (0.015-2build3) ...
1108s Setting up libpango-1.0-0:arm64 (1.51.0+ds-4) ...
1108s Setting up libcgi-pm-perl (4.61-1) ...
1108s Setting up libhtml-format-perl (2.16-2) ...
1108s Setting up fonts-urw-base35 (20200910-8) ...
1108s Setting up apache2-bin (2.4.58-1ubuntu2) ...
1108s Setting up libcairo2:arm64 (1.18.0-1) ...
1108s Setting up libnet-smtp-ssl-perl (1.04-2) ...
1108s Setting up libmodule-runtime-perl (0.016-2) ...
1108s Setting up libmailtools-perl (2.21-2) ...
1108s Setting up libcgi-session-perl (4.48-4) ...
1108s Setting up libgd3:arm64 (2.3.3-9ubuntu1) ...
1108s Setting up libxml-simple-perl (2.25-2) ...
1108s Setting up libxt6:arm64 (1:1.2.1-1.1) ...
1108s Setting up libxml-libxslt-perl:arm64 (2.002001-1build1) ...
1108s Setting up libcups2:arm64 (2.4.6-0ubuntu3) ...
1108s Setting up libhtml-tableextract-perl (2.15-2) ...
1108s Setting up libhttp-daemon-perl (6.16-1) ...
1108s Setting up libhsa-runtime64-1 (5.7.1-1) ...
1108s Setting up emboss-lib (6.6.0+dfsg-12ubuntu1) ...
1108s Setting up libpangoft2-1.0-0:arm64 (1.51.0+ds-4) ...
1108s Setting up libpangocairo-1.0-0:arm64 (1.51.0+ds-4) ...
1108s Setting up bioperl (1.7.8-1) ...
1108s Setting up libgs10-common (10.02.1~dfsg1-0ubuntu2) ...
1108s Setting up libsvg-graph-perl (0.02-4) ...
1108s Setting up libxmu6:arm64 (2:1.1.3-3) ...
1108s Setting up emboss (6.6.0+dfsg-12ubuntu1) ...
1108s Setting up openjdk-21-jre-headless:arm64 (21.0.2+13-2) ...
1108s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode
1108s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode
1108s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
1108s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
1108s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
1108s Setting up libmodule-implementation-perl (0.09-2) ...
1108s Setting up libcgi-fast-perl (1:2.17-1) ...
1108s Setting up libpackage-stash-perl (0.40-1) ...
1108s Setting up libimport-into-perl (1.002005-2) ...
1108s Setting up libmoo-perl (2.005005-1) ...
1108s Setting up apache2 (2.4.58-1ubuntu2) ...
1108s Enabling module mpm_event.
1109s Enabling module authz_core.
1109s Enabling module authz_host.
1109s Enabling module authn_core.
1109s Enabling module auth_basic.
1109s Enabling module access_compat.
1109s Enabling module authn_file.
1109s Enabling module authz_user.
1109s Enabling module alias.
1109s Enabling module dir.
1109s Enabling module autoindex.
1109s Enabling module env.
1109s Enabling module mime.
1109s Enabling module negotiation.
1109s Enabling module setenvif.
1109s Enabling module filter.
1109s Enabling module deflate.
1109s Enabling module status.
1109s Enabling module reqtimeout.
1109s Enabling conf charset.
1109s Enabling conf localized-error-pages.
1109s Enabling conf other-vhosts-access-log.
1109s Enabling conf security.
1109s Enabling conf serve-cgi-bin.
1109s Enabling site 000-default.
1109s info: Executing deferred 'a2enconf javascript-common' for package javascript-common
1109s Enabling conf javascript-common.
1110s Created symlink /etc/systemd/system/multi-user.target.wants/apache2.service → /usr/lib/systemd/system/apache2.service.

1111s Created symlink /etc/systemd/system/multi-user.target.wants/apache-htcacheclean.service → /usr/lib/systemd/system/apache-htcacheclean.service.

1112s Setting up libxaw7:arm64 (2:1.0.14-1) ...
1112s Setting up libmime-tools-perl (5.514-1) ...
1112s Setting up libbio-coordinate-perl (1.7.1-4) ...
1112s Setting up libgd-perl (2.78-1build1) ...
1112s Setting up libarray-compare-perl (3.0.8-1) ...
1112s Setting up libamdhip64-5 (5.2.3-12) ...
1112s Setting up libgvc6 (2.42.2-8build1) ...
1112s Setting up libgd-svg-perl (0.33-3) ...
1112s Setting up libb-hooks-endofscope-perl (0.28-1) ...
1112s Setting up libgs10:arm64 (10.02.1~dfsg1-0ubuntu2) ...
1112s Setting up graphviz (2.42.2-8build1) ...
1112s Setting up libucx0:arm64 (1.16.0+ds-4) ...
1112s Setting up libopenmpi3:arm64 (4.1.6-5ubuntu1) ...
1112s Setting up ghostscript (10.02.1~dfsg1-0ubuntu2) ...
1112s Setting up libnamespace-clean-perl (0.27-2) ...
1112s Setting up openmpi-bin (4.1.6-5ubuntu1) ...
1112s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
1112s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
1112s Setting up phyml (3:3.3.20220408-3) ...
1112s Setting up liblwp-protocol-https-perl (6.13-1) ...
1112s Setting up libruby:arm64 (1:3.1+1) ...
1112s Setting up libwww-perl (6.76-1) ...
1112s Setting up libapache2-mod-perl2 (2.0.13-1build1) ...
1112s apache2_invoke: Enable module perl
1113s Setting up libapache2-reload-perl (0.14-1) ...
1113s Setting up libbio-db-biofetch-perl (1.7.3-4) ...
1113s Setting up libbio-tools-run-remoteblast-perl (1.7.3-3) ...
1113s Setting up ruby3.1 (3.1.2-7ubuntu4) ...
1113s Setting up libxml-parser-perl (2.47-1build1) ...
1113s Setting up libvm-ec2-perl (1.28-4) ...
1113s Setting up libxml-twig-perl (1:3.52-2) ...
1113s Setting up libxml-xpath-perl (1.48-1) ...
1113s Setting up libbio-variation-perl (1.7.5-3) ...
1113s Setting up libapache-dbi-perl (1.12-3) ...
1113s Setting up ruby (1:3.1+1) ...
1113s Setting up rake (13.0.6-3) ...
1113s Setting up libxml-sax-expat-perl (0.51-2) ...
1113s update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::Expat with priority 50...
1113s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
1113s Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
1113s Setting up libxml-perl (0.08-4) ...
1113s Setting up libbio-db-gff-perl (1.7.4-1) ...
1113s Setting up libbio-db-seqfeature-perl (1.7.4-2) ...
1113s Setting up libbio-graphics-perl (2.40-6) ...
1113s Setting up libsoap-lite-perl (1.27-3) ...
1113s Setting up libgraphviz-perl (2.24-1) ...
1113s Setting up libruby3.1:arm64 (3.1.2-7ubuntu4) ...
1113s Setting up libbio-cluster-perl (1.7.3-6) ...
1113s Setting up libxml-dom-perl (1.46-2) ...
1113s Setting up libbio-asn1-entrezgene-perl (1.730-3) ...
1113s Setting up ruby-rubygems (3.4.20-1) ...
1113s Setting up gbrowse (2.56+dfsg-12build1) ...
1114s apache2_invoke: Enable configuration gbrowse
1115s Setting up gbrowse-calign:arm64 (2.56+dfsg-12build1) ...
1115s Setting up libxml-dom-xpath-perl (0.14-4) ...
1115s Setting up libbio-eutilities-perl (1.77-2) ...
1115s Setting up libxmlrpc-lite-perl (0.717-5) ...
1115s Setting up ruby-sdbm:arm64 (1.0.0-5build3) ...
1115s Setting up libbio-featureio-perl (1.6.905-2) ...
1115s Setting up autopkgtest-satdep (0) ...
1115s Processing triggers for libc-bin (2.39-0ubuntu2) ...
1115s Processing triggers for ufw (0.36.2-5) ...
1115s Processing triggers for man-db (2.12.0-3) ...
1117s Processing triggers for shared-mime-info (2.4-1) ...
1118s Processing triggers for install-info (7.1-3) ...
1118s Processing triggers for ca-certificates-java (20240118) ...
1119s Adding debian:ACCVRAIZ1.pem
1119s Adding debian:AC_RAIZ_FNMT-RCM.pem
1119s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
1119s Adding debian:ANF_Secure_Server_Root_CA.pem
1119s Adding debian:Actalis_Authentication_Root_CA.pem
1119s Adding debian:AffirmTrust_Commercial.pem
1119s Adding debian:AffirmTrust_Networking.pem
1119s Adding debian:AffirmTrust_Premium.pem
1119s Adding debian:AffirmTrust_Premium_ECC.pem
1119s Adding debian:Amazon_Root_CA_1.pem
1119s Adding debian:Amazon_Root_CA_2.pem
1119s Adding debian:Amazon_Root_CA_3.pem
1119s Adding debian:Amazon_Root_CA_4.pem
1119s Adding debian:Atos_TrustedRoot_2011.pem
1119s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem
1119s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem
1119s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
1119s Adding debian:BJCA_Global_Root_CA1.pem
1119s Adding debian:BJCA_Global_Root_CA2.pem
1119s Adding debian:Baltimore_CyberTrust_Root.pem
1119s Adding debian:Buypass_Class_2_Root_CA.pem
1119s Adding debian:Buypass_Class_3_Root_CA.pem
1119s Adding debian:CA_Disig_Root_R2.pem
1119s Adding debian:CFCA_EV_ROOT.pem
1119s Adding debian:COMODO_Certification_Authority.pem
1119s Adding debian:COMODO_ECC_Certification_Authority.pem
1119s Adding debian:COMODO_RSA_Certification_Authority.pem
1119s Adding debian:Certainly_Root_E1.pem
1119s Adding debian:Certainly_Root_R1.pem
1119s Adding debian:Certigna.pem
1119s Adding debian:Certigna_Root_CA.pem
1119s Adding debian:Certum_EC-384_CA.pem
1119s Adding debian:Certum_Trusted_Network_CA.pem
1119s Adding debian:Certum_Trusted_Network_CA_2.pem
1119s Adding debian:Certum_Trusted_Root_CA.pem
1119s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem
1119s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem
1119s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem
1119s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem
1119s Adding debian:Comodo_AAA_Services_root.pem
1119s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem
1119s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem
1119s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
1119s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
1119s Adding debian:DigiCert_Assured_ID_Root_CA.pem
1119s Adding debian:DigiCert_Assured_ID_Root_G2.pem
1119s Adding debian:DigiCert_Assured_ID_Root_G3.pem
1119s Adding debian:DigiCert_Global_Root_CA.pem
1119s Adding debian:DigiCert_Global_Root_G2.pem
1119s Adding debian:DigiCert_Global_Root_G3.pem
1119s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
1119s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem
1119s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem
1119s Adding debian:DigiCert_Trusted_Root_G4.pem
1119s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
1119s Adding debian:Entrust_Root_Certification_Authority.pem
1119s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
1119s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
1119s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
1119s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
1119s Adding debian:GLOBALTRUST_2020.pem
1119s Adding debian:GTS_Root_R1.pem
1119s Adding debian:GTS_Root_R2.pem
1119s Adding debian:GTS_Root_R3.pem
1119s Adding debian:GTS_Root_R4.pem
1119s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
1119s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
1119s Adding debian:GlobalSign_Root_CA.pem
1119s Adding debian:GlobalSign_Root_CA_-_R3.pem
1119s Adding debian:GlobalSign_Root_CA_-_R6.pem
1119s Adding debian:GlobalSign_Root_E46.pem
1119s Adding debian:GlobalSign_Root_R46.pem
1119s Adding debian:Go_Daddy_Class_2_CA.pem
1119s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
1119s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem
1119s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem
1119s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
1119s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
1119s Adding debian:HiPKI_Root_CA_-_G1.pem
1119s Adding debian:Hongkong_Post_Root_CA_3.pem
1119s Adding debian:ISRG_Root_X1.pem
1119s Adding debian:ISRG_Root_X2.pem
1119s Adding debian:IdenTrust_Commercial_Root_CA_1.pem
1119s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
1119s Adding debian:Izenpe.com.pem
1119s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
1119s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
1119s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
1119s Adding debian:NAVER_Global_Root_Certification_Authority.pem
1119s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
1119s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
1119s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
1119s Adding debian:QuoVadis_Root_CA_1_G3.pem
1119s Adding debian:QuoVadis_Root_CA_2.pem
1119s Adding debian:QuoVadis_Root_CA_2_G3.pem
1119s Adding debian:QuoVadis_Root_CA_3.pem
1119s Adding debian:QuoVadis_Root_CA_3_G3.pem
1119s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
1119s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
1119s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
1119s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
1119s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem
1119s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem
1119s Adding debian:SZAFIR_ROOT_CA2.pem
1119s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem
1119s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem
1119s Adding debian:SecureSign_RootCA11.pem
1119s Adding debian:SecureTrust_CA.pem
1119s Adding debian:Secure_Global_CA.pem
1119s Adding debian:Security_Communication_ECC_RootCA1.pem
1119s Adding debian:Security_Communication_RootCA2.pem
1119s Adding debian:Security_Communication_RootCA3.pem
1119s Adding debian:Security_Communication_Root_CA.pem
1119s Adding debian:Starfield_Class_2_CA.pem
1119s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
1119s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
1119s Adding debian:SwissSign_Gold_CA_-_G2.pem
1119s Adding debian:SwissSign_Silver_CA_-_G2.pem
1119s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
1119s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
1119s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
1119s Adding debian:TWCA_Global_Root_CA.pem
1119s Adding debian:TWCA_Root_Certification_Authority.pem
1119s Adding debian:TeliaSonera_Root_CA_v1.pem
1119s Adding debian:Telia_Root_CA_v2.pem
1119s Adding debian:TrustAsia_Global_Root_CA_G3.pem
1119s Adding debian:TrustAsia_Global_Root_CA_G4.pem
1119s Adding debian:Trustwave_Global_Certification_Authority.pem
1119s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
1119s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
1119s Adding debian:TunTrust_Root_CA.pem
1119s Adding debian:UCA_Extended_Validation_Root.pem
1119s Adding debian:UCA_Global_G2_Root.pem
1119s Adding debian:USERTrust_ECC_Certification_Authority.pem
1119s Adding debian:USERTrust_RSA_Certification_Authority.pem
1119s Adding debian:XRamp_Global_CA_Root.pem
1119s Adding debian:certSIGN_ROOT_CA.pem
1119s Adding debian:certSIGN_Root_CA_G2.pem
1119s Adding debian:e-Szigno_Root_CA_2017.pem
1119s Adding debian:ePKI_Root_Certification_Authority.pem
1119s Adding debian:emSign_ECC_Root_CA_-_C3.pem
1119s Adding debian:emSign_ECC_Root_CA_-_G3.pem
1119s Adding debian:emSign_Root_CA_-_C1.pem
1119s Adding debian:emSign_Root_CA_-_G1.pem
1119s Adding debian:vTrus_ECC_Root_CA.pem
1119s Adding debian:vTrus_Root_CA.pem
1119s done.
1119s Setting up openjdk-21-jdk-headless:arm64 (21.0.2+13-2) ...
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jar to provide /usr/bin/jar (jar) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javac to provide /usr/bin/javac (javac) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javap to provide /usr/bin/javap (javap) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jps to provide /usr/bin/jps (jps) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
1119s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
1119s Setting up default-jre-headless (2:1.21-75+exp1) ...
1119s Setting up default-jdk-headless (2:1.21-75+exp1) ...
1119s Setting up bioperl-run (1.7.3-9) ...
1119s Processing triggers for menu (2.1.50) ...
1119s Setting up blends-common (0.7.6) ...
1119s Setting up med-config (3.8.1) ...
1119s info: Selecting GID from range 100 to 999 ...
1119s info: Adding group `med' (GID 115) ...
1138s (Reading database ... 97126 files and directories currently installed.)
1138s Removing autopkgtest-satdep (0) ...
1145s autopkgtest [09:13:35]: test autodep8-perl-recommends: /usr/share/pkg-perl-autopkgtest/runner runtime-deps-and-recommends
1145s autopkgtest [09:13:35]: test autodep8-perl-recommends: [-----------------------
1146s /usr/share/pkg-perl-autopkgtest/runtime-deps-and-recommends.d/syntax.t .. 
1146s 1..12
1146s ok 1 - Package gbrowse is known to dpkg
1146s ok 2 - Got status information for package gbrowse
1146s ok 3 # skip gbrowse has Suggestions and no explicit skip list
1146s ok 4 # skip gbrowse has Suggestions and no explicit skip list
1146s ok 5 - Package gbrowse-data is known to dpkg
1146s ok 6 - Got status information for package gbrowse-data
1146s ok 7 - Got file list for package gbrowse-data
1146s ok 8 # skip no perl modules to test in gbrowse-data
1146s ok 9 - Package gbrowse-calign is known to dpkg
1146s ok 10 - Got status information for package gbrowse-calign
1146s ok 11 - Got file list for package gbrowse-calign
1146s # Subtest: all modules in gbrowse-calign pass the syntax check
1146s     1..1
1146s     ok 1 - /usr/bin/perl -wc /usr/lib/aarch64-linux-gnu/perl5/5.38/Bio/Graphics/Browser2/CAlign.pm exited successfully
1146s ok 12 - all modules in gbrowse-calign pass the syntax check
1146s ok
1146s All tests successful.
1146s Files=1, Tests=12,  1 wallclock secs ( 0.01 usr  0.01 sys +  0.13 cusr  0.04 csys =  0.19 CPU)
1146s Result: PASS
1146s autopkgtest [09:13:36]: test autodep8-perl-recommends: -----------------------]
1146s autodep8-perl-recommends PASS (superficial)
1146s autopkgtest [09:13:36]: test autodep8-perl-recommends:  - - - - - - - - - - results - - - - - - - - - -
1147s autopkgtest [09:13:37]: @@@@@@@@@@@@@@@@@@@@ summary
1147s autodep8-perl-build-deps PASS
1147s autodep8-perl        PASS (superficial)
1147s autodep8-perl-recommends PASS (superficial)
1151s Creating nova instance adt-noble-arm64-gbrowse-20240311-085430-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240311.img (UUID 900cfff9-7f1a-42c7-81a7-22635cd2a5f9)...
1151s Creating nova instance adt-noble-arm64-gbrowse-20240311-085430-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240311.img (UUID 900cfff9-7f1a-42c7-81a7-22635cd2a5f9)...
1151s Creating nova instance adt-noble-arm64-gbrowse-20240311-085430-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240311.img (UUID 900cfff9-7f1a-42c7-81a7-22635cd2a5f9)...