0s autopkgtest [16:48:19]: starting date and time: 2024-03-24 16:48:19+0000
  0s autopkgtest [16:48:19]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps
  0s autopkgtest [16:48:19]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.a3xkmc8c/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:python-pysam,src:curl,src:gnutls28,src:htslib,src:libpsl,src:nettle,src:openssl --apt-upgrade gasic --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python-pysam/0.22.0+ds-1build1 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 htslib/1.19+ds-1.1build2 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-10.secgroup --name adt-noble-arm64-gasic-20240324-164819-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
669s Creating nova instance adt-noble-arm64-gasic-20240324-164819-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240324.img (UUID 943dd583-2042-4622-b4ce-bdf10ad153ac)...
669s nova boot failed (attempt #1):
669s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader')
669s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader')
669s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken')
669s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth')
669s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP')
669s DEBUG (session:517) REQ: curl -g -i -X GET https://keystone.ps6.canonical.com:5000/v3 -H "Accept: application/json" -H "User-Agent: nova keystoneauth1/4.0.0 python-requests/2.22.0 CPython/3.8.10"
669s DEBUG (connectionpool:962) Starting new HTTPS connection (1): keystone.ps6.canonical.com:5000
669s DEBUG (connectionpool:429) https://keystone.ps6.canonical.com:5000 "GET /v3 HTTP/1.1" 200 267
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 267 Content-Type: application/json Date: Sun, 24 Mar 2024 16:48:43 GMT Keep-Alive: timeout=75, max=1000 Server: Apache/2.4.52 (Ubuntu) Vary: X-Auth-Token x-openstack-request-id: req-c649ae72-0408-4a78-8994-9915f6d7b0f2
669s DEBUG (session:580) RESP BODY: {"version": {"id": "v3.14", "status": "stable", "updated": "2020-04-07T00:00:00Z", "links": [{"rel": "self", "href": "https://keystone.ps6.canonical.com:5000/v3/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.identity-v3+json"}]}}
669s DEBUG (session:946) GET call to https://keystone.ps6.canonical.com:5000/v3 used request id req-c649ae72-0408-4a78-8994-9915f6d7b0f2
669s DEBUG (base:182) Making authentication request to https://keystone.ps6.canonical.com:5000/v3/auth/tokens
669s DEBUG (connectionpool:429) https://keystone.ps6.canonical.com:5000 "POST /v3/auth/tokens HTTP/1.1" 201 12445
669s DEBUG (base:187) {"token": {"methods": ["password"], "user": {"domain": {"id": "default", "name": "Default"}, "id": "369f50a481564a2c9433776a4ebd224d", "name": "prod-proposed-migration-arm64", "password_expires_at": null}, "audit_ids": ["W0jr7TF2QiKgdxjgxq-Zng"], "expires_at": "2024-03-25T16:48:43.000000Z", "issued_at": "2024-03-24T16:48:43.000000Z", "project": {"domain": {"id": "default", "name": "Default"}, "id": "bd8b3df3f03d43a0a9303b7c0434fdab", "name": "prod-proposed-migration-arm64_project"}, "is_domain": false, "roles": [{"id": "15cf997650e345b7b21c02b5cdb7d84a", "name": "member"}, {"id": "86bf3043974746c2bf52c2a9f362f986", "name": "reader"}], "is_admin_project": false, "catalog": [{"endpoints": [{"id": "213cdf38198c4581bd5b7d6d0836923b", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/", "region": "prodstack6"}, {"id": "67061eee26944a1a8009f9d07be19738", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/", "region": "prodstack6"}, {"id": "fc88c52c749a47d08a24a2c7efbde01b", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/", "region": "prodstack6"}], "id": "06e4714942634054bf9aa11715312b4e", "type": "s3", "name": "s3"}, {"endpoints": [{"id": "8aa44c94b63746bd9b37f1008ad55fa8", "interface": "admin", "region_id": "prodstack6", "url": "https://aodh-admin.ps6.canonical.com:8042", "region": "prodstack6"}, {"id": "92cf08a80a0242ebbca8ec893cf332b1", "interface": "public", "region_id": "prodstack6", "url": "https://aodh.ps6.canonical.com:8042", "region": "prodstack6"}, {"id": "d8139c6e11ae4edcb78981c12bd53212", "interface": "internal", "region_id": "prodstack6", "url": "https://aodh-internal.ps6.canonical.com:8042", "region": "prodstack6"}], "id": "2fb939b0b969435c8f0c5fa4edb4de94", "type": "alarming", "name": "aodh"}, {"endpoints": [{"id": "a49fcc80e658411885f88cdd8432a571", "interface": "internal", "region_id": "prodstack6", "url": "https://heat-internal.ps6.canonical.com:8000/v1", "region": "prodstack6"}, {"id": "b23866fddba8415885b06c064c34b94b", "interface": "public", "region_id": "prodstack6", "url": "https://heat.ps6.canonical.com:8000/v1", "region": "prodstack6"}, {"id": "f84ae55197f94b8392a678f35c82ca26", "interface": "admin", "region_id": "prodstack6", "url": "https://heat-admin.ps6.canonical.com:8000/v1", "region": "prodstack6"}], "id": "3d4b59f7dab644b2b527e8e96b697545", "type": "cloudformation", "name": "heat-cfn"}, {"endpoints": [{"id": "2e0143334c6241169f45f1c11970c6bc", "interface": "public", "region_id": "prodstack6", "url": "https://heat.ps6.canonical.com:8004/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "5e19c32243c04a3faf1e5f9ab900c260", "interface": "internal", "region_id": "prodstack6", "url": "https://heat-internal.ps6.canonical.com:8004/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "b3fc5c88ec8543a691fec75726b86967", "interface": "admin", "region_id": "prodstack6", "url": "https://heat-admin.ps6.canonical.com:8004/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "43b926205044476b8093b18d8ce0a9e4", "type": "orchestration", "name": "heat"}, {"endpoints": [{"id": "a47569b96e5b4146a312e4673504557c", "interface": "public", "region_id": "prodstack6", "url": "https://glance.ps6.canonical.com:9292", "region": "prodstack6"}, {"id": "bba35c4ab04f4114a2a34e65568537bd", "interface": "internal", "region_id": "prodstack6", "url": "https://glance-internal.ps6.canonical.com:9292", "region": "prodstack6"}, {"id": "ef769f1117c74a62a279131486c89628", "interface": "admin", "region_id": "prodstack6", "url": "https://glance-admin.ps6.canonical.com:9292", "region": "prodstack6"}], "id": "49de724549524bd78e9cd46a4477226f", "type": "image", "name": "glance"}, {"endpoints": [{"id": "a1a41e9a1e2d42e5b6cd5380cd1e21bf", "interface": "admin", "region_id": "prodstack6", "url": "https://cinder-admin.ps6.canonical.com:8776/v3/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "d2309a99724b4111827482c68a832c0c", "interface": "public", "region_id": "prodstack6", "url": "https://cinder.ps6.canonical.com:8776/v3/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "f8a02e3949ff42afa772eb5e74dbef9f", "interface": "internal", "region_id": "prodstack6", "url": "https://cinder-internal.ps6.canonical.com:8776/v3/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "5bf6578a631349e3af4bf36d7adb18e1", "type": "volumev3", "name": "cinderv3"}, {"endpoints": [{"id": "01d84128f36444e9b01549b86bd69116", "interface": "admin", "region_id": "prodstack6", "url": "https://barbican-admin.ps6.canonical.com:9312", "region": "prodstack6"}, {"id": "0ce4a8777e0b40a88f7fc0f77e34a605", "interface": "public", "region_id": "prodstack6", "url": "https://barbican.ps6.canonical.com:9311", "region": "prodstack6"}, {"id": "f507ba49e4a7435cb330234217c92449", "interface": "internal", "region_id": "prodstack6", "url": "https://barbican-internal.ps6.canonical.com:9311", "region": "prodstack6"}], "id": "62cb1c3d9f6c45979c13516a6b3ff114", "type": "key-manager", "name": "barbican"}, {"endpoints": [{"id": "3cb6121bd8f14da8aa2fba7be823a2b4", "interface": "internal", "region_id": "prodstack6", "url": "https://neutron-internal.ps6.canonical.com:9696", "region": "prodstack6"}, {"id": "46ba11d133fe4e8f9e8f9097ba737682", "interface": "admin", "region_id": "prodstack6", "url": "https://neutron-admin.ps6.canonical.com:9696", "region": "prodstack6"}, {"id": "d872eb6aa23d40009165aa3dcdce3948", "interface": "public", "region_id": "prodstack6", "url": "https://neutron.ps6.canonical.com:9696", "region": "prodstack6"}], "id": "759cb6fdfbc146dd8b9d1ba444c4b9db", "type": "network", "name": "neutron"}, {"endpoints": [{"id": "4349d565f72446da9699269f85df5e8b", "interface": "internal", "region_id": "prodstack6", "url": "https://manila-internal.ps6.canonical.com:8786/v2/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "a483dcc58f5e415e9ec739c94474e609", "interface": "public", "region_id": "prodstack6", "url": "https://manila.ps6.canonical.com:8786/v2/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "c1f14236723e42878562d8dd63d5a6a0", "interface": "admin", "region_id": "prodstack6", "url": "https://manila-admin.ps6.canonical.com:8786/v2/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "93fc4008035946deb1f433c2dd905a5d", "type": "sharev2", "name": "manilav2"}, {"endpoints": [{"id": "0fa148793c7249c8b187b6b4ff425731", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/swift/v1/AUTH_e4b04ca58d734ed0aa29e306adad4f79/simplestreams/data", "region": "prodstack6"}, {"id": "555ade266a6b4bcc81b6e5abf607aec5", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/swift/v1/AUTH_e4b04ca58d734ed0aa29e306adad4f79/simplestreams/data", "region": "prodstack6"}, {"id": "7dad1a7b1552465686424fc014463173", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/swift/simplestreams/data", "region": "prodstack6"}], "id": "977dd359af1a4fcc91a9daf4dc33b0f3", "type": "product-streams", "name": "image-stream"}, {"endpoints": [{"id": "12d30eabcdec4831bd15273d55b1cbab", "interface": "internal", "region_id": "prodstack6", "url": "https://manila-internal.ps6.canonical.com:8786/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "29d35b2b483346479f1ff1a13604d50e", "interface": "admin", "region_id": "prodstack6", "url": "https://manila-admin.ps6.canonical.com:8786/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "4aa1422b8f5945d8aed9ba6a8d670e5c", "interface": "public", "region_id": "prodstack6", "url": "https://manila.ps6.canonical.com:8786/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "ac5e4f28fa794cde99f1d7ffc1b664e5", "type": "share", "name": "manila"}, {"endpoints": [{"id": "c7db93d54a684d8caeae1d9e18a59118", "interface": "admin", "region_id": "prodstack6", "url": "https://nova-admin.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}, {"id": "dd7a796f401b477f9f1b5bbc05747d8d", "interface": "public", "region_id": "prodstack6", "url": "https://nova.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}, {"id": "e7ecb038d830462ea67b0b463af5e013", "interface": "internal", "region_id": "prodstack6", "url": "https://nova-internal.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}], "id": "b4519af08e174d4a8333a2d14ac3ba3b", "type": "compute", "name": "nova"}, {"endpoints": [{"id": "02ef5b6154934ffd97d8b5b8e4d70d2a", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/swift/v1/AUTH_bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "2741abe526e94842a4fa801423ba1ef0", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/swift/v1/AUTH_bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "3742f9406c604516933d6fd8c29e0880", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/swift", "region": "prodstack6"}], "id": "c7f07a7b3b3c408c96200dfd1d1a0f6f", "type": "object-store", "name": "swift"}, {"endpoints": [{"id": "06d4ed6c160a43f2b7fa7f80ad1dc709", "interface": "internal", "region_id": "prodstack6", "url": "https://designate-internal.ps6.canonical.com:9001", "region": "prodstack6"}, {"id": "1e240624a50c4ca0aaa6ef63cbc94f1b", "interface": "admin", "region_id": "prodstack6", "url": "https://designate-admin.ps6.canonical.com:9001", "region": "prodstack6"}, {"id": "f94d7d17997a43fd9c63b34c43301c6e", "interface": "public", "region_id": "prodstack6", "url": "https://designate.ps6.canonical.com:9001", "region": "prodstack6"}], "id": "cf82013d63844fedbe96bcacb6bd1fef", "type": "dns", "name": "designate"}, {"endpoints": [{"id": "4a688340be464710bfa60bf3f88f41c4", "interface": "admin", "region_id": "prodstack6", "url": "https://gnocchi-admin.ps6.canonical.com:8041", "region": "prodstack6"}, {"id": "a5a95506c96d4716adb4efc3ac9051be", "interface": "public", "region_id": "prodstack6", "url": "https://gnocchi.ps6.canonical.com:8041", "region": "prodstack6"}, {"id": "eebc17a086834f8fa8bb6b35c8061a8c", "interface": "internal", "region_id": "prodstack6", "url": "https://gnocchi-internal.ps6.canonical.com:8041", "region": "prodstack6"}], "id": "d10589e854a446a5b852593f33f170a7", "type": "metric", "name": "gnocchi"}, {"endpoints": [{"id": "08f66df28d0f47f3bec12f29e06d85ac", "interface": "admin", "region_id": "prodstack6", "url": "https://keystone-admin.ps6.canonical.com:35357/v3", "region": "prodstack6"}, {"id": "46d270b45ceb42db902f4d241afa6a70", "interface": "public", "region_id": "prodstack6", "url": "https://keystone.ps6.canonical.com:5000/v3", "region": "prodstack6"}, {"id": "a4addee11d9349cfa46ec6660dbad947", "interface": "internal", "region_id": "prodstack6", "url": "https://keystone-internal.ps6.canonical.com:5000/v3", "region": "prodstack6"}], "id": "deb38a775a9b4e87a8de9e3eed779882", "type": "identity", "name": "keystone"}, {"endpoints": [{"id": "18b4af5f40664babb94e884c6a53ccf3", "interface": "admin", "region_id": "prodstack6", "url": "https://octavia-admin.ps6.canonical.com:9876", "region": "prodstack6"}, {"id": "2b6f7ba7f9944ee1aebd6dccc5223b2d", "interface": "internal", "region_id": "prodstack6", "url": "https://octavia-internal.ps6.canonical.com:9876", "region": "prodstack6"}, {"id": "5e3012e9c79e4890be4d964b6208f5c6", "interface": "public", "region_id": "prodstack6", "url": "https://octavia.ps6.canonical.com:9876", "region": "prodstack6"}], "id": "e00337be20d54948b66a1c3109b885c6", "type": "load-balancer", "name": "octavia"}, {"endpoints": [{"id": "2d2942b35f3041389ad810f679d02f22", "interface": "public", "region_id": "prodstack6", "url": "https://placement.ps6.canonical.com:8778", "region": "prodstack6"}, {"id": "2e3beaac7ac14284b72e2592820ad725", "interface": "admin", "region_id": "prodstack6", "url": "https://placement-admin.ps6.canonical.com:8778", "region": "prodstack6"}, {"id": "91060f6df9ae444f81808adf40540d94", "interface": "internal", "region_id": "prodstack6", "url": "https://placement-internal.ps6.canonical.com:8778", "region": "prodstack6"}], "id": "edc6e37f154f4c0ab3dd4d52b82bf873", "type": "placement", "name": "placement"}]}}
669s REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}c028ba647d3c109cd35512124fb7bede614e22f2a48b9c1afb40803831f328b1"
669s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}c028ba647d3c109cd35512124fb7bede614e22f2a48b9c1afb40803831f328b1"
669s DEBUG (connectionpool:962) Starting new HTTPS connection (1): nova.ps6.canonical.com:8774
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1 HTTP/1.1" 302 0
669s RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Sun, 24 Mar 2024 16:48:44 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps6.canonical.com:8774/v2.1/ Server: Apache/2.4.52 (Ubuntu) x-compute-request-id: req-80b92299-bfb9-4bbb-a7e4-936db3dec8a6 x-openstack-request-id: req-80b92299-bfb9-4bbb-a7e4-936db3dec8a6
669s DEBUG (session:548) RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Sun, 24 Mar 2024 16:48:44 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps6.canonical.com:8774/v2.1/ Server: Apache/2.4.52 (Ubuntu) x-compute-request-id: req-80b92299-bfb9-4bbb-a7e4-936db3dec8a6 x-openstack-request-id: req-80b92299-bfb9-4bbb-a7e4-936db3dec8a6
669s RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged.
669s DEBUG (session:580) RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged.
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/ HTTP/1.1" 200 397
669s RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Sun, 24 Mar 2024 16:48:44 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-3a82c030-ca0c-48f3-920f-dbe430c29935 x-openstack-request-id: req-3a82c030-ca0c-48f3-920f-dbe430c29935
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Sun, 24 Mar 2024 16:48:44 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-3a82c030-ca0c-48f3-920f-dbe430c29935 x-openstack-request-id: req-3a82c030-ca0c-48f3-920f-dbe430c29935
669s RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.90", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}}
669s DEBUG (session:580) RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.90", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}}
669s GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/ used request id req-3a82c030-ca0c-48f3-920f-dbe430c29935
669s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/ used request id req-3a82c030-ca0c-48f3-920f-dbe430c29935
669s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader')
669s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader')
669s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken')
669s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth')
669s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP')
669s DEBUG (session:517) REQ: curl -g -i -X GET https://glance.ps6.canonical.com:9292/v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}c028ba647d3c109cd35512124fb7bede614e22f2a48b9c1afb40803831f328b1" -H "X-OpenStack-Nova-API-Version: 2.87"
669s DEBUG (connectionpool:962) Starting new HTTPS connection (1): glance.ps6.canonical.com:9292
669s DEBUG (connectionpool:429) https://glance.ps6.canonical.com:9292 "GET /v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac HTTP/1.1" 200 1935
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 1935 Content-Type: application/json Date: Sun, 24 Mar 2024 16:48:44 GMT Keep-Alive: timeout=75, max=1000 Server: Apache/2.4.52 (Ubuntu) X-Openstack-Request-Id: req-d68505b8-51a5-4e65-aa58-b073bdc37329
669s DEBUG (session:580) RESP BODY: {"base_image_ref": "09c3944a-cd0d-425d-b22f-cde7ec51d155", "boot_roles": "member,reader", "hw_cdrom_bus": "scsi", "hw_disk_bus": "virtio", "hw_machine_type": "virt", "hw_video_model": "virtio", "hw_vif_model": "virtio", "image_location": "snapshot", "image_state": "available", "image_type": "snapshot", "instance_uuid": "bc4d8474-2306-4932-a029-eb05e6aa0070", "owner_id": "bd8b3df3f03d43a0a9303b7c0434fdab", "owner_project_name": "prod-proposed-migration-arm64_project", "owner_specified.openstack.md5": "087a26f2222dab8516c553374a9d1b4d", "owner_specified.openstack.object": "images/adt/ubuntu-noble-arm64-server-20240201.img", "owner_specified.openstack.sha256": "095b278df09de76f01843de514daf3f8eb0a0cc67fee4b3491161913153619db", "owner_user_name": "prod-proposed-migration-arm64", "user_id": "369f50a481564a2c9433776a4ebd224d", "name": "adt/ubuntu-noble-arm64-server-20240324.img", "disk_format": "qcow2", "container_format": "bare", "visibility": "private", "size": 2340683776, "virtual_size": 21474836480, "status": "active", "checksum": "02217aaa63f3d49965efbdca847c5c0e", "protected": false, "min_ram": 0, "min_disk": 20, "owner": "bd8b3df3f03d43a0a9303b7c0434fdab", "os_hidden": false, "os_hash_algo": "sha512", "os_hash_value": "fe5802fc52ec80a7347f29b260d672bc687386dd19d42565cf2df8da873e45471382efffbf170f29d30990636735cf90a3d2d75240f91e8b686c49ccc9dc9b83", "id": "943dd583-2042-4622-b4ce-bdf10ad153ac", "created_at": "2024-03-24T04:06:45Z", "updated_at": "2024-03-24T04:07:10Z", "locations": [{"url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/943dd583-2042-4622-b4ce-bdf10ad153ac/snap", "metadata": {"store": "ceph"}}], "direct_url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/943dd583-2042-4622-b4ce-bdf10ad153ac/snap", "tags": [], "self": "/v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac", "file": "/v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac/file", "schema": "/v2/schemas/image", "stores": "ceph"}
669s DEBUG (session:936) GET call to image for https://glance.ps6.canonical.com:9292/v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac used request id req-d68505b8-51a5-4e65-aa58-b073bdc37329
669s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors/autopkgtest -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}c028ba647d3c109cd35512124fb7bede614e22f2a48b9c1afb40803831f328b1" -H "X-OpenStack-Nova-API-Version: 2.87"
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors/autopkgtest HTTP/1.1" 404 84
669s DEBUG (session:548) RESP: [404] Connection: Keep-Alive Content-Length: 84 Content-Type: application/json; charset=UTF-8 Date: Sun, 24 Mar 2024 16:48:44 GMT Keep-Alive: timeout=75, max=998 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-105a847e-7d04-4b18-b68e-ebf487f92312 x-openstack-request-id: req-105a847e-7d04-4b18-b68e-ebf487f92312
669s DEBUG (session:580) RESP BODY: {"itemNotFound": {"code": 404, "message": "Flavor autopkgtest could not be found."}}
669s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors/autopkgtest used request id req-105a847e-7d04-4b18-b68e-ebf487f92312
669s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors?is_public=None -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}c028ba647d3c109cd35512124fb7bede614e22f2a48b9c1afb40803831f328b1" -H "X-OpenStack-Nova-API-Version: 2.87"
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors?is_public=None HTTP/1.1" 200 1739
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 1739 Content-Type: application/json Date: Sun, 24 Mar 2024 16:48:44 GMT Keep-Alive: timeout=75, max=997 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-402c604c-e268-4832-8349-48c187e5fc5d x-openstack-request-id: req-402c604c-e268-4832-8349-48c187e5fc5d
669s DEBUG (session:580) RESP BODY: {"flavors": [{"id": "062428d9-35a1-461f-a33a-38436ed516b4", "name": "autopkgtest-cpu8-ram16-disk160-arm64", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/062428d9-35a1-461f-a33a-38436ed516b4"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/062428d9-35a1-461f-a33a-38436ed516b4"}], "description": null}, {"id": "8d27c5f0-65c7-4018-b3f7-50463875ab09", "name": "autopkgtest", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}], "description": null}, {"id": "8ebe34fb-1390-4cc7-bbe5-0d38c80f2fb4", "name": "autopkgtest-cpu2-ram4-disk20-arm64", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/8ebe34fb-1390-4cc7-bbe5-0d38c80f2fb4"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/8ebe34fb-1390-4cc7-bbe5-0d38c80f2fb4"}], "description": null}, {"id": "a8256f9e-53ee-4584-ad7f-60e088825b83", "name": "autopkgtest-big", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/a8256f9e-53ee-4584-ad7f-60e088825b83"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/a8256f9e-53ee-4584-ad7f-60e088825b83"}], "description": null}, {"id": "cfc564ac-9f6e-4477-91c4-a89ccb4b744e", "name": "autopkgtest-cpu4-ram8-disk100-arm64", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/cfc564ac-9f6e-4477-91c4-a89ccb4b744e"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/cfc564ac-9f6e-4477-91c4-a89ccb4b744e"}], "description": null}]}
669s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors?is_public=None used request id req-402c604c-e268-4832-8349-48c187e5fc5d
669s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}c028ba647d3c109cd35512124fb7bede614e22f2a48b9c1afb40803831f328b1" -H "X-OpenStack-Nova-API-Version: 2.87"
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09 HTTP/1.1" 200 613
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 613 Content-Type: application/json Date: Sun, 24 Mar 2024 16:48:44 GMT Keep-Alive: timeout=75, max=996 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-6a979159-0556-4c44-b57a-04f03da9ace7 x-openstack-request-id: req-6a979159-0556-4c44-b57a-04f03da9ace7
669s DEBUG (session:580) RESP BODY: {"flavor": {"id": "8d27c5f0-65c7-4018-b3f7-50463875ab09", "name": "autopkgtest", "ram": 4096, "disk": 20, "swap": 0, "OS-FLV-EXT-DATA:ephemeral": 0, "OS-FLV-DISABLED:disabled": false, "vcpus": 2, "os-flavor-access:is_public": false, "rxtx_factor": 1.0, "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}], "description": null, "extra_specs": {"aggregate_instance_extra_specs:commit": "builder-arm64", "hw_rng:allowed": "True"}}}
669s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09 used request id req-6a979159-0556-4c44-b57a-04f03da9ace7
669s DEBUG (session:517) REQ: curl -g -i -X POST https://nova.ps6.canonical.com:8774/v2.1/servers -H "Accept: application/json" -H "Content-Type: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}c028ba647d3c109cd35512124fb7bede614e22f2a48b9c1afb40803831f328b1" -H "X-OpenStack-Nova-API-Version: 2.87" -d '{"server": {"name": "adt-noble-arm64-gasic-20240324-164819-juju-7f2275-prod-proposed-migration-environment-2", "imageRef": "943dd583-2042-4622-b4ce-bdf10ad153ac", "flavorRef": "8d27c5f0-65c7-4018-b3f7-50463875ab09", "user_data": "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", "key_name": "testbed-juju-7f2275-prod-proposed-migration-environment-2", "min_count": 1, "max_count": 1, "security_groups": [{"name": "autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-10.secgroup"}], "networks": [{"uuid": "6ea4839c-9760-4b54-ab7d-70a6312667d1"}]}}'
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "POST /v2.1/servers HTTP/1.1" 403 115
669s DEBUG (session:548) RESP: [403] Connection: Keep-Alive Content-Length: 115 Content-Type: application/json; charset=UTF-8 Date: Sun, 24 Mar 2024 16:48:44 GMT Keep-Alive: timeout=75, max=995 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-f9e11cd5-a83b-4a4a-a7a0-74f4ff5013fd x-openstack-request-id: req-f9e11cd5-a83b-4a4a-a7a0-74f4ff5013fd
669s DEBUG (session:580) RESP BODY: {"forbidden": {"code": 403, "message": "Quota exceeded for cores: Requested 2, but already used 140 of 140 cores"}}
669s DEBUG (session:936) POST call to compute for https://nova.ps6.canonical.com:8774/v2.1/servers used request id req-f9e11cd5-a83b-4a4a-a7a0-74f4ff5013fd
669s DEBUG (shell:822) Quota exceeded for cores: Requested 2, but already used 140 of 140 cores (HTTP 403) (Request-ID: req-f9e11cd5-a83b-4a4a-a7a0-74f4ff5013fd)
669s Traceback (most recent call last):
669s   File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 820, in main
669s     OpenStackComputeShell().main(argv)
669s   File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 742, in main
669s     args.func(self.cs, args)
669s   File "/usr/lib/python3/dist-packages/novaclient/v2/shell.py", line 971, in do_boot
669s     server = cs.servers.create(*boot_args, **boot_kwargs)
669s   File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 1477, in create
669s     return self._boot(response_key, *boot_args, **boot_kwargs)
669s   File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 836, in _boot
669s     return self._create('/servers', body, response_key,
669s   File "/usr/lib/python3/dist-packages/novaclient/base.py", line 363, in _create
669s     resp, body = self.api.client.post(url, body=body)
669s   File "/usr/lib/python3/dist-packages/keystoneauth1/adapter.py", line 392, in post
669s     return self.request(url, 'POST', **kwargs)
669s   File "/usr/lib/python3/dist-packages/novaclient/client.py", line 78, in request
669s     raise exceptions.from_response(resp, body, url, method)
669s novaclient.exceptions.Forbidden: Quota exceeded for cores: Requested 2, but already used 140 of 140 cores (HTTP 403) (Request-ID: req-f9e11cd5-a83b-4a4a-a7a0-74f4ff5013fd)
669s ERROR (Forbidden): Quota exceeded for cores: Requested 2, but already used 140 of 140 cores (HTTP 403) (Request-ID: req-f9e11cd5-a83b-4a4a-a7a0-74f4ff5013fd)
669s nova boot failed (attempt #2):
669s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader')
669s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader')
669s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken')
669s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth')
669s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP')
669s DEBUG (session:517) REQ: curl -g -i -X GET https://keystone.ps6.canonical.com:5000/v3 -H "Accept: application/json" -H "User-Agent: nova keystoneauth1/4.0.0 python-requests/2.22.0 CPython/3.8.10"
669s DEBUG (connectionpool:962) Starting new HTTPS connection (1): keystone.ps6.canonical.com:5000
669s DEBUG (connectionpool:429) https://keystone.ps6.canonical.com:5000 "GET /v3 HTTP/1.1" 200 267
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 267 Content-Type: application/json Date: Sun, 24 Mar 2024 16:53:46 GMT Keep-Alive: timeout=75, max=1000 Server: Apache/2.4.52 (Ubuntu) Vary: X-Auth-Token x-openstack-request-id: req-98a83388-6a52-4458-9449-74477108cab7
669s DEBUG (session:580) RESP BODY: {"version": {"id": "v3.14", "status": "stable", "updated": "2020-04-07T00:00:00Z", "links": [{"rel": "self", "href": "https://keystone.ps6.canonical.com:5000/v3/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.identity-v3+json"}]}}
669s DEBUG (session:946) GET call to https://keystone.ps6.canonical.com:5000/v3 used request id req-98a83388-6a52-4458-9449-74477108cab7
669s DEBUG (base:182) Making authentication request to https://keystone.ps6.canonical.com:5000/v3/auth/tokens
669s DEBUG (connectionpool:429) https://keystone.ps6.canonical.com:5000 "POST /v3/auth/tokens HTTP/1.1" 201 12445
669s DEBUG (base:187) {"token": {"methods": ["password"], "user": {"domain": {"id": "default", "name": "Default"}, "id": "369f50a481564a2c9433776a4ebd224d", "name": "prod-proposed-migration-arm64", "password_expires_at": null}, "audit_ids": ["S8kTpxfzTbivLT8x5k5uLA"], "expires_at": "2024-03-25T16:53:46.000000Z", "issued_at": "2024-03-24T16:53:46.000000Z", "project": {"domain": {"id": "default", "name": "Default"}, "id": "bd8b3df3f03d43a0a9303b7c0434fdab", "name": "prod-proposed-migration-arm64_project"}, "is_domain": false, "roles": [{"id": "15cf997650e345b7b21c02b5cdb7d84a", "name": "member"}, {"id": "86bf3043974746c2bf52c2a9f362f986", "name": "reader"}], "is_admin_project": false, "catalog": [{"endpoints": [{"id": "213cdf38198c4581bd5b7d6d0836923b", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/", "region": "prodstack6"}, {"id": "67061eee26944a1a8009f9d07be19738", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/", "region": "prodstack6"}, {"id": "fc88c52c749a47d08a24a2c7efbde01b", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/", "region": "prodstack6"}], "id": "06e4714942634054bf9aa11715312b4e", "type": "s3", "name": "s3"}, {"endpoints": [{"id": "8aa44c94b63746bd9b37f1008ad55fa8", "interface": "admin", "region_id": "prodstack6", "url": "https://aodh-admin.ps6.canonical.com:8042", "region": "prodstack6"}, {"id": "92cf08a80a0242ebbca8ec893cf332b1", "interface": "public", "region_id": "prodstack6", "url": "https://aodh.ps6.canonical.com:8042", "region": "prodstack6"}, {"id": "d8139c6e11ae4edcb78981c12bd53212", "interface": "internal", "region_id": "prodstack6", "url": "https://aodh-internal.ps6.canonical.com:8042", "region": "prodstack6"}], "id": "2fb939b0b969435c8f0c5fa4edb4de94", "type": "alarming", "name": "aodh"}, {"endpoints": [{"id": "a49fcc80e658411885f88cdd8432a571", "interface": "internal", "region_id": "prodstack6", "url": "https://heat-internal.ps6.canonical.com:8000/v1", "region": "prodstack6"}, {"id": "b23866fddba8415885b06c064c34b94b", "interface": "public", "region_id": "prodstack6", "url": "https://heat.ps6.canonical.com:8000/v1", "region": "prodstack6"}, {"id": "f84ae55197f94b8392a678f35c82ca26", "interface": "admin", "region_id": "prodstack6", "url": "https://heat-admin.ps6.canonical.com:8000/v1", "region": "prodstack6"}], "id": "3d4b59f7dab644b2b527e8e96b697545", "type": "cloudformation", "name": "heat-cfn"}, {"endpoints": [{"id": "2e0143334c6241169f45f1c11970c6bc", "interface": "public", "region_id": "prodstack6", "url": "https://heat.ps6.canonical.com:8004/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "5e19c32243c04a3faf1e5f9ab900c260", "interface": "internal", "region_id": "prodstack6", "url": "https://heat-internal.ps6.canonical.com:8004/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "b3fc5c88ec8543a691fec75726b86967", "interface": "admin", "region_id": "prodstack6", "url": "https://heat-admin.ps6.canonical.com:8004/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "43b926205044476b8093b18d8ce0a9e4", "type": "orchestration", "name": "heat"}, {"endpoints": [{"id": "a47569b96e5b4146a312e4673504557c", "interface": "public", "region_id": "prodstack6", "url": "https://glance.ps6.canonical.com:9292", "region": "prodstack6"}, {"id": "bba35c4ab04f4114a2a34e65568537bd", "interface": "internal", "region_id": "prodstack6", "url": "https://glance-internal.ps6.canonical.com:9292", "region": "prodstack6"}, {"id": "ef769f1117c74a62a279131486c89628", "interface": "admin", "region_id": "prodstack6", "url": "https://glance-admin.ps6.canonical.com:9292", "region": "prodstack6"}], "id": "49de724549524bd78e9cd46a4477226f", "type": "image", "name": "glance"}, {"endpoints": [{"id": "a1a41e9a1e2d42e5b6cd5380cd1e21bf", "interface": "admin", "region_id": "prodstack6", "url": "https://cinder-admin.ps6.canonical.com:8776/v3/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "d2309a99724b4111827482c68a832c0c", "interface": "public", "region_id": "prodstack6", "url": "https://cinder.ps6.canonical.com:8776/v3/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "f8a02e3949ff42afa772eb5e74dbef9f", "interface": "internal", "region_id": "prodstack6", "url": "https://cinder-internal.ps6.canonical.com:8776/v3/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "5bf6578a631349e3af4bf36d7adb18e1", "type": "volumev3", "name": "cinderv3"}, {"endpoints": [{"id": "01d84128f36444e9b01549b86bd69116", "interface": "admin", "region_id": "prodstack6", "url": "https://barbican-admin.ps6.canonical.com:9312", "region": "prodstack6"}, {"id": "0ce4a8777e0b40a88f7fc0f77e34a605", "interface": "public", "region_id": "prodstack6", "url": "https://barbican.ps6.canonical.com:9311", "region": "prodstack6"}, {"id": "f507ba49e4a7435cb330234217c92449", "interface": "internal", "region_id": "prodstack6", "url": "https://barbican-internal.ps6.canonical.com:9311", "region": "prodstack6"}], "id": "62cb1c3d9f6c45979c13516a6b3ff114", "type": "key-manager", "name": "barbican"}, {"endpoints": [{"id": "3cb6121bd8f14da8aa2fba7be823a2b4", "interface": "internal", "region_id": "prodstack6", "url": "https://neutron-internal.ps6.canonical.com:9696", "region": "prodstack6"}, {"id": "46ba11d133fe4e8f9e8f9097ba737682", "interface": "admin", "region_id": "prodstack6", "url": "https://neutron-admin.ps6.canonical.com:9696", "region": "prodstack6"}, {"id": "d872eb6aa23d40009165aa3dcdce3948", "interface": "public", "region_id": "prodstack6", "url": "https://neutron.ps6.canonical.com:9696", "region": "prodstack6"}], "id": "759cb6fdfbc146dd8b9d1ba444c4b9db", "type": "network", "name": "neutron"}, {"endpoints": [{"id": "4349d565f72446da9699269f85df5e8b", "interface": "internal", "region_id": "prodstack6", "url": "https://manila-internal.ps6.canonical.com:8786/v2/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "a483dcc58f5e415e9ec739c94474e609", "interface": "public", "region_id": "prodstack6", "url": "https://manila.ps6.canonical.com:8786/v2/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "c1f14236723e42878562d8dd63d5a6a0", "interface": "admin", "region_id": "prodstack6", "url": "https://manila-admin.ps6.canonical.com:8786/v2/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "93fc4008035946deb1f433c2dd905a5d", "type": "sharev2", "name": "manilav2"}, {"endpoints": [{"id": "0fa148793c7249c8b187b6b4ff425731", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/swift/v1/AUTH_e4b04ca58d734ed0aa29e306adad4f79/simplestreams/data", "region": "prodstack6"}, {"id": "555ade266a6b4bcc81b6e5abf607aec5", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/swift/v1/AUTH_e4b04ca58d734ed0aa29e306adad4f79/simplestreams/data", "region": "prodstack6"}, {"id": "7dad1a7b1552465686424fc014463173", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/swift/simplestreams/data", "region": "prodstack6"}], "id": "977dd359af1a4fcc91a9daf4dc33b0f3", "type": "product-streams", "name": "image-stream"}, {"endpoints": [{"id": "12d30eabcdec4831bd15273d55b1cbab", "interface": "internal", "region_id": "prodstack6", "url": "https://manila-internal.ps6.canonical.com:8786/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "29d35b2b483346479f1ff1a13604d50e", "interface": "admin", "region_id": "prodstack6", "url": "https://manila-admin.ps6.canonical.com:8786/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "4aa1422b8f5945d8aed9ba6a8d670e5c", "interface": "public", "region_id": "prodstack6", "url": "https://manila.ps6.canonical.com:8786/v1/bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}], "id": "ac5e4f28fa794cde99f1d7ffc1b664e5", "type": "share", "name": "manila"}, {"endpoints": [{"id": "c7db93d54a684d8caeae1d9e18a59118", "interface": "admin", "region_id": "prodstack6", "url": "https://nova-admin.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}, {"id": "dd7a796f401b477f9f1b5bbc05747d8d", "interface": "public", "region_id": "prodstack6", "url": "https://nova.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}, {"id": "e7ecb038d830462ea67b0b463af5e013", "interface": "internal", "region_id": "prodstack6", "url": "https://nova-internal.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}], "id": "b4519af08e174d4a8333a2d14ac3ba3b", "type": "compute", "name": "nova"}, {"endpoints": [{"id": "02ef5b6154934ffd97d8b5b8e4d70d2a", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/swift/v1/AUTH_bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "2741abe526e94842a4fa801423ba1ef0", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/swift/v1/AUTH_bd8b3df3f03d43a0a9303b7c0434fdab", "region": "prodstack6"}, {"id": "3742f9406c604516933d6fd8c29e0880", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/swift", "region": "prodstack6"}], "id": "c7f07a7b3b3c408c96200dfd1d1a0f6f", "type": "object-store", "name": "swift"}, {"endpoints": [{"id": "06d4ed6c160a43f2b7fa7f80ad1dc709", "interface": "internal", "region_id": "prodstack6", "url": "https://designate-internal.ps6.canonical.com:9001", "region": "prodstack6"}, {"id": "1e240624a50c4ca0aaa6ef63cbc94f1b", "interface": "admin", "region_id": "prodstack6", "url": "https://designate-admin.ps6.canonical.com:9001", "region": "prodstack6"}, {"id": "f94d7d17997a43fd9c63b34c43301c6e", "interface": "public", "region_id": "prodstack6", "url": "https://designate.ps6.canonical.com:9001", "region": "prodstack6"}], "id": "cf82013d63844fedbe96bcacb6bd1fef", "type": "dns", "name": "designate"}, {"endpoints": [{"id": "4a688340be464710bfa60bf3f88f41c4", "interface": "admin", "region_id": "prodstack6", "url": "https://gnocchi-admin.ps6.canonical.com:8041", "region": "prodstack6"}, {"id": "a5a95506c96d4716adb4efc3ac9051be", "interface": "public", "region_id": "prodstack6", "url": "https://gnocchi.ps6.canonical.com:8041", "region": "prodstack6"}, {"id": "eebc17a086834f8fa8bb6b35c8061a8c", "interface": "internal", "region_id": "prodstack6", "url": "https://gnocchi-internal.ps6.canonical.com:8041", "region": "prodstack6"}], "id": "d10589e854a446a5b852593f33f170a7", "type": "metric", "name": "gnocchi"}, {"endpoints": [{"id": "08f66df28d0f47f3bec12f29e06d85ac", "interface": "admin", "region_id": "prodstack6", "url": "https://keystone-admin.ps6.canonical.com:35357/v3", "region": "prodstack6"}, {"id": "46d270b45ceb42db902f4d241afa6a70", "interface": "public", "region_id": "prodstack6", "url": "https://keystone.ps6.canonical.com:5000/v3", "region": "prodstack6"}, {"id": "a4addee11d9349cfa46ec6660dbad947", "interface": "internal", "region_id": "prodstack6", "url": "https://keystone-internal.ps6.canonical.com:5000/v3", "region": "prodstack6"}], "id": "deb38a775a9b4e87a8de9e3eed779882", "type": "identity", "name": "keystone"}, {"endpoints": [{"id": "18b4af5f40664babb94e884c6a53ccf3", "interface": "admin", "region_id": "prodstack6", "url": "https://octavia-admin.ps6.canonical.com:9876", "region": "prodstack6"}, {"id": "2b6f7ba7f9944ee1aebd6dccc5223b2d", "interface": "internal", "region_id": "prodstack6", "url": "https://octavia-internal.ps6.canonical.com:9876", "region": "prodstack6"}, {"id": "5e3012e9c79e4890be4d964b6208f5c6", "interface": "public", "region_id": "prodstack6", "url": "https://octavia.ps6.canonical.com:9876", "region": "prodstack6"}], "id": "e00337be20d54948b66a1c3109b885c6", "type": "load-balancer", "name": "octavia"}, {"endpoints": [{"id": "2d2942b35f3041389ad810f679d02f22", "interface": "public", "region_id": "prodstack6", "url": "https://placement.ps6.canonical.com:8778", "region": "prodstack6"}, {"id": "2e3beaac7ac14284b72e2592820ad725", "interface": "admin", "region_id": "prodstack6", "url": "https://placement-admin.ps6.canonical.com:8778", "region": "prodstack6"}, {"id": "91060f6df9ae444f81808adf40540d94", "interface": "internal", "region_id": "prodstack6", "url": "https://placement-internal.ps6.canonical.com:8778", "region": "prodstack6"}], "id": "edc6e37f154f4c0ab3dd4d52b82bf873", "type": "placement", "name": "placement"}]}}
669s REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}b497786732ae1f04872df131a425879d01b6dd667e5127c0286a7940be095bc6"
669s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}b497786732ae1f04872df131a425879d01b6dd667e5127c0286a7940be095bc6"
669s DEBUG (connectionpool:962) Starting new HTTPS connection (1): nova.ps6.canonical.com:8774
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1 HTTP/1.1" 302 0
669s RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Sun, 24 Mar 2024 16:53:46 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps6.canonical.com:8774/v2.1/ Server: Apache/2.4.52 (Ubuntu) x-compute-request-id: req-4953d61d-ed07-4c49-98be-119e20d2b65b x-openstack-request-id: req-4953d61d-ed07-4c49-98be-119e20d2b65b
669s DEBUG (session:548) RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Sun, 24 Mar 2024 16:53:46 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps6.canonical.com:8774/v2.1/ Server: Apache/2.4.52 (Ubuntu) x-compute-request-id: req-4953d61d-ed07-4c49-98be-119e20d2b65b x-openstack-request-id: req-4953d61d-ed07-4c49-98be-119e20d2b65b
669s RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged.
669s DEBUG (session:580) RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged.
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/ HTTP/1.1" 200 397
669s RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Sun, 24 Mar 2024 16:53:46 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-323327f9-336e-4daf-a7a7-e4cbc2832820 x-openstack-request-id: req-323327f9-336e-4daf-a7a7-e4cbc2832820
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Sun, 24 Mar 2024 16:53:46 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-323327f9-336e-4daf-a7a7-e4cbc2832820 x-openstack-request-id: req-323327f9-336e-4daf-a7a7-e4cbc2832820
669s RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.90", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}}
669s DEBUG (session:580) RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.90", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}}
669s GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/ used request id req-323327f9-336e-4daf-a7a7-e4cbc2832820
669s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/ used request id req-323327f9-336e-4daf-a7a7-e4cbc2832820
669s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader')
669s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader')
669s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken')
669s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth')
669s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth')
669s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP')
669s DEBUG (session:517) REQ: curl -g -i -X GET https://glance.ps6.canonical.com:9292/v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}b497786732ae1f04872df131a425879d01b6dd667e5127c0286a7940be095bc6" -H "X-OpenStack-Nova-API-Version: 2.87"
669s DEBUG (connectionpool:962) Starting new HTTPS connection (1): glance.ps6.canonical.com:9292
669s DEBUG (connectionpool:429) https://glance.ps6.canonical.com:9292 "GET /v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac HTTP/1.1" 200 1935
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 1935 Content-Type: application/json Date: Sun, 24 Mar 2024 16:53:47 GMT Keep-Alive: timeout=75, max=1000 Server: Apache/2.4.52 (Ubuntu) X-Openstack-Request-Id: req-13bf3141-ac90-4ccf-bec2-007273524d8d
669s DEBUG (session:580) RESP BODY: {"base_image_ref": "09c3944a-cd0d-425d-b22f-cde7ec51d155", "boot_roles": "member,reader", "hw_cdrom_bus": "scsi", "hw_disk_bus": "virtio", "hw_machine_type": "virt", "hw_video_model": "virtio", "hw_vif_model": "virtio", "image_location": "snapshot", "image_state": "available", "image_type": "snapshot", "instance_uuid": "bc4d8474-2306-4932-a029-eb05e6aa0070", "owner_id": "bd8b3df3f03d43a0a9303b7c0434fdab", "owner_project_name": "prod-proposed-migration-arm64_project", "owner_specified.openstack.md5": "087a26f2222dab8516c553374a9d1b4d", "owner_specified.openstack.object": "images/adt/ubuntu-noble-arm64-server-20240201.img", "owner_specified.openstack.sha256": "095b278df09de76f01843de514daf3f8eb0a0cc67fee4b3491161913153619db", "owner_user_name": "prod-proposed-migration-arm64", "user_id": "369f50a481564a2c9433776a4ebd224d", "name": "adt/ubuntu-noble-arm64-server-20240324.img", "disk_format": "qcow2", "container_format": "bare", "visibility": "private", "size": 2340683776, "virtual_size": 21474836480, "status": "active", "checksum": "02217aaa63f3d49965efbdca847c5c0e", "protected": false, "min_ram": 0, "min_disk": 20, "owner": "bd8b3df3f03d43a0a9303b7c0434fdab", "os_hidden": false, "os_hash_algo": "sha512", "os_hash_value": "fe5802fc52ec80a7347f29b260d672bc687386dd19d42565cf2df8da873e45471382efffbf170f29d30990636735cf90a3d2d75240f91e8b686c49ccc9dc9b83", "id": "943dd583-2042-4622-b4ce-bdf10ad153ac", "created_at": "2024-03-24T04:06:45Z", "updated_at": "2024-03-24T04:07:10Z", "locations": [{"url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/943dd583-2042-4622-b4ce-bdf10ad153ac/snap", "metadata": {"store": "ceph"}}], "direct_url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/943dd583-2042-4622-b4ce-bdf10ad153ac/snap", "tags": [], "self": "/v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac", "file": "/v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac/file", "schema": "/v2/schemas/image", "stores": "ceph"}
669s DEBUG (session:936) GET call to image for https://glance.ps6.canonical.com:9292/v2/images/943dd583-2042-4622-b4ce-bdf10ad153ac used request id req-13bf3141-ac90-4ccf-bec2-007273524d8d
669s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors/autopkgtest -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}b497786732ae1f04872df131a425879d01b6dd667e5127c0286a7940be095bc6" -H "X-OpenStack-Nova-API-Version: 2.87"
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors/autopkgtest HTTP/1.1" 404 84
669s DEBUG (session:548) RESP: [404] Connection: Keep-Alive Content-Length: 84 Content-Type: application/json; charset=UTF-8 Date: Sun, 24 Mar 2024 16:53:47 GMT Keep-Alive: timeout=75, max=998 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-5ec4c1e6-579d-4bd1-ae96-29c538d73537 x-openstack-request-id: req-5ec4c1e6-579d-4bd1-ae96-29c538d73537
669s DEBUG (session:580) RESP BODY: {"itemNotFound": {"code": 404, "message": "Flavor autopkgtest could not be found."}}
669s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors/autopkgtest used request id req-5ec4c1e6-579d-4bd1-ae96-29c538d73537
669s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors?is_public=None -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}b497786732ae1f04872df131a425879d01b6dd667e5127c0286a7940be095bc6" -H "X-OpenStack-Nova-API-Version: 2.87"
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors?is_public=None HTTP/1.1" 200 1739
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 1739 Content-Type: application/json Date: Sun, 24 Mar 2024 16:53:47 GMT Keep-Alive: timeout=75, max=997 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-eeb616c2-8752-4c77-b673-cad1b2112f6b x-openstack-request-id: req-eeb616c2-8752-4c77-b673-cad1b2112f6b
669s DEBUG (session:580) RESP BODY: {"flavors": [{"id": "062428d9-35a1-461f-a33a-38436ed516b4", "name": "autopkgtest-cpu8-ram16-disk160-arm64", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/062428d9-35a1-461f-a33a-38436ed516b4"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/062428d9-35a1-461f-a33a-38436ed516b4"}], "description": null}, {"id": "8d27c5f0-65c7-4018-b3f7-50463875ab09", "name": "autopkgtest", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}], "description": null}, {"id": "8ebe34fb-1390-4cc7-bbe5-0d38c80f2fb4", "name": "autopkgtest-cpu2-ram4-disk20-arm64", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/8ebe34fb-1390-4cc7-bbe5-0d38c80f2fb4"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/8ebe34fb-1390-4cc7-bbe5-0d38c80f2fb4"}], "description": null}, {"id": "a8256f9e-53ee-4584-ad7f-60e088825b83", "name": "autopkgtest-big", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/a8256f9e-53ee-4584-ad7f-60e088825b83"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/a8256f9e-53ee-4584-ad7f-60e088825b83"}], "description": null}, {"id": "cfc564ac-9f6e-4477-91c4-a89ccb4b744e", "name": "autopkgtest-cpu4-ram8-disk100-arm64", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/cfc564ac-9f6e-4477-91c4-a89ccb4b744e"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/cfc564ac-9f6e-4477-91c4-a89ccb4b744e"}], "description": null}]}
669s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors?is_public=None used request id req-eeb616c2-8752-4c77-b673-cad1b2112f6b
669s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}b497786732ae1f04872df131a425879d01b6dd667e5127c0286a7940be095bc6" -H "X-OpenStack-Nova-API-Version: 2.87"
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09 HTTP/1.1" 200 613
669s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 613 Content-Type: application/json Date: Sun, 24 Mar 2024 16:53:47 GMT Keep-Alive: timeout=75, max=996 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-eb60ceb6-2560-4648-b057-544dcadf0d40 x-openstack-request-id: req-eb60ceb6-2560-4648-b057-544dcadf0d40
669s DEBUG (session:580) RESP BODY: {"flavor": {"id": "8d27c5f0-65c7-4018-b3f7-50463875ab09", "name": "autopkgtest", "ram": 4096, "disk": 20, "swap": 0, "OS-FLV-EXT-DATA:ephemeral": 0, "OS-FLV-DISABLED:disabled": false, "vcpus": 2, "os-flavor-access:is_public": false, "rxtx_factor": 1.0, "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09"}], "description": null, "extra_specs": {"aggregate_instance_extra_specs:commit": "builder-arm64", "hw_rng:allowed": "True"}}}
669s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors/8d27c5f0-65c7-4018-b3f7-50463875ab09 used request id req-eb60ceb6-2560-4648-b057-544dcadf0d40
669s DEBUG (session:517) REQ: curl -g -i -X POST https://nova.ps6.canonical.com:8774/v2.1/servers -H "Accept: application/json" -H "Content-Type: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}b497786732ae1f04872df131a425879d01b6dd667e5127c0286a7940be095bc6" -H "X-OpenStack-Nova-API-Version: 2.87" -d '{"server": {"name": "adt-noble-arm64-gasic-20240324-164819-juju-7f2275-prod-proposed-migration-environment-2", "imageRef": "943dd583-2042-4622-b4ce-bdf10ad153ac", "flavorRef": "8d27c5f0-65c7-4018-b3f7-50463875ab09", "user_data": "I2Nsb3VkLWNvbmZpZwpob3N0bmFtZTogYXV0b3BrZ3Rlc3QKbWFuYWdlX2V0Y19ob3N0czogdHJ1ZQphcHRfdXBkYXRlOiB0cnVlCmFwdF91cGdyYWRlOiBmYWxzZQphcHRfbWlycm9yOiBodHRwOi8vZnRwbWFzdGVyLmludGVybmFsL3VidW50dS8KCnJ1bmNtZDoKIC0gZWNobyAnQWNxdWlyZTo6TGFuZ3VhZ2VzICJub25lIjsnID4gL2V0Yy9hcHQvYXB0LmNvbmYuZC85MG5vbGFuZ3VhZ2VzCiAtIGVjaG8gJ2ZvcmNlLXVuc2FmZS1pbycgPiAvZXRjL2Rwa2cvZHBrZy5jZmcuZC9hdXRvcGtndGVzdAogLSBwcmludGYgJ1xuVEVSTT1saW51eFxuJ2h0dHBfcHJveHk9aHR0cDovL3NxdWlkLmludGVybmFsOjMxMjgnXG4naHR0cHNfcHJveHk9aHR0cDovL3NxdWlkLmludGVybmFsOjMxMjgnXG4nbm9fcHJveHk9MTI3LjAuMC4xLDEyNy4wLjEuMSxsb2dpbi51YnVudHUuY29tLGxvY2FsaG9zdCxsb2NhbGRvbWFpbixub3ZhbG9jYWwsaW50ZXJuYWwsYXJjaGl2ZS51YnVudHUuY29tLHBvcnRzLnVidW50dS5jb20sc2VjdXJpdHkudWJ1bnR1LmNvbSxkZGVicy51YnVudHUuY29tLGNoYW5nZWxvZ3MudWJ1bnR1LmNvbSxsYXVuY2hwYWRsaWJyYXJpYW4ubmV0LGxhdW5jaHBhZGNvbnRlbnQubmV0LGxhdW5jaHBhZC5uZXQsMTAuMjQuMC4wLzI0LGtleXN0b25lLnBzNS5jYW5vbmljYWwuY29tLG9iamVjdHN0b3JhZ2UucHJvZHN0YWNrNS5jYW5vbmljYWwuY29tJ1xuJyA+PiAvZXRjL2Vudmlyb25tZW50CiAtIHNlZCAtaSAtciAnL14xMjcuMC4xLjEvIHMvYXV0b3BrZ3Rlc3QtW14gXStcLi9hdXRvcGtndGVzdFwuLycgL2V0Yy9ob3N0cwo=", "key_name": "testbed-juju-7f2275-prod-proposed-migration-environment-2", "min_count": 1, "max_count": 1, "security_groups": [{"name": "autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-10.secgroup"}], "networks": [{"uuid": "6ea4839c-9760-4b54-ab7d-70a6312667d1"}]}}'
669s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "POST /v2.1/servers HTTP/1.1" 403 115
669s DEBUG (session:548) RESP: [403] Connection: Keep-Alive Content-Length: 115 Content-Type: application/json; charset=UTF-8 Date: Sun, 24 Mar 2024 16:53:47 GMT Keep-Alive: timeout=75, max=995 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-c0a2cb0c-6f31-4528-aeec-c0cbd4a0ad8c x-openstack-request-id: req-c0a2cb0c-6f31-4528-aeec-c0cbd4a0ad8c
669s DEBUG (session:580) RESP BODY: {"forbidden": {"code": 403, "message": "Quota exceeded for cores: Requested 2, but already used 140 of 140 cores"}}
669s DEBUG (session:936) POST call to compute for https://nova.ps6.canonical.com:8774/v2.1/servers used request id req-c0a2cb0c-6f31-4528-aeec-c0cbd4a0ad8c
669s DEBUG (shell:822) Quota exceeded for cores: Requested 2, but already used 140 of 140 cores (HTTP 403) (Request-ID: req-c0a2cb0c-6f31-4528-aeec-c0cbd4a0ad8c)
669s Traceback (most recent call last):
669s   File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 820, in main
669s     OpenStackComputeShell().main(argv)
669s   File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 742, in main
669s     args.func(self.cs, args)
669s   File "/usr/lib/python3/dist-packages/novaclient/v2/shell.py", line 971, in do_boot
669s     server = cs.servers.create(*boot_args, **boot_kwargs)
669s   File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 1477, in create
669s     return self._boot(response_key, *boot_args, **boot_kwargs)
669s   File "/usr/lib/python3/dist-packages/novaclient/v2/servers.py", line 836, in _boot
669s     return self._create('/servers', body, response_key,
669s   File "/usr/lib/python3/dist-packages/novaclient/base.py", line 363, in _create
669s     resp, body = self.api.client.post(url, body=body)
669s   File "/usr/lib/python3/dist-packages/keystoneauth1/adapter.py", line 392, in post
669s     return self.request(url, 'POST', **kwargs)
669s   File "/usr/lib/python3/dist-packages/novaclient/client.py", line 78, in request
669s     raise exceptions.from_response(resp, body, url, method)
669s novaclient.exceptions.Forbidden: Quota exceeded for cores: Requested 2, but already used 140 of 140 cores (HTTP 403) (Request-ID: req-c0a2cb0c-6f31-4528-aeec-c0cbd4a0ad8c)
669s ERROR (Forbidden): Quota exceeded for cores: Requested 2, but already used 140 of 140 cores (HTTP 403) (Request-ID: req-c0a2cb0c-6f31-4528-aeec-c0cbd4a0ad8c)
671s autopkgtest [16:59:30]: testbed dpkg architecture: arm64
671s autopkgtest [16:59:30]: testbed apt version: 2.7.12
671s autopkgtest [16:59:30]: @@@@@@@@@@@@@@@@@@@@ test bed setup
672s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
672s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
672s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3986 kB]
672s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [57.3 kB]
672s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB]
672s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [708 kB]
672s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
672s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.7 kB]
672s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
672s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4364 kB]
673s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
673s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [70.1 kB]
673s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
675s Fetched 9850 kB in 2s (5662 kB/s)
675s Reading package lists...
678s Reading package lists...
679s Building dependency tree...
679s Reading state information...
679s Calculating upgrade...
679s The following packages will be REMOVED:
679s   libssl3
679s The following NEW packages will be installed:
679s   libssl3t64
679s The following packages have been kept back:
679s   curl
679s The following packages will be upgraded:
679s   openssl
680s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded.
680s Need to get 2777 kB of archives.
680s After this operation, 139 kB of additional disk space will be used.
680s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.13-0ubuntu2 [985 kB]
680s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3t64 arm64 3.0.13-0ubuntu2 [1793 kB]
681s Fetched 2777 kB in 1s (3944 kB/s)
681s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74819 files and directories currently installed.)
681s Preparing to unpack .../openssl_3.0.13-0ubuntu2_arm64.deb ...
681s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ...
682s dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested:
682s  wget depends on libssl3 (>= 3.0.0).
682s  u-boot-tools depends on libssl3 (>= 3.0.0).
682s  tnftp depends on libssl3 (>= 3.0.0).
682s  tcpdump depends on libssl3 (>= 3.0.0).
682s  systemd-resolved depends on libssl3 (>= 3.0.0).
682s  systemd depends on libssl3 (>= 3.0.0).
682s  sudo depends on libssl3 (>= 3.0.0).
682s  sbsigntool depends on libssl3 (>= 3.0.0).
682s  rsync depends on libssl3 (>= 3.0.0).
682s  python3-cryptography depends on libssl3 (>= 3.0.0).
682s  openssh-server depends on libssl3 (>= 3.0.10).
682s  openssh-client depends on libssl3 (>= 3.0.10).
682s  mtd-utils depends on libssl3 (>= 3.0.0).
682s  mokutil depends on libssl3 (>= 3.0.0).
682s  linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0).
682s  libsystemd-shared:arm64 depends on libssl3 (>= 3.0.0).
682s  libssh-4:arm64 depends on libssl3 (>= 3.0.0).
682s  libsasl2-modules:arm64 depends on libssl3 (>= 3.0.0).
682s  libsasl2-2:arm64 depends on libssl3 (>= 3.0.0).
682s  libpython3.12-minimal:arm64 depends on libssl3 (>= 3.0.0).
682s  libnvme1 depends on libssl3 (>= 3.0.0).
682s  libkrb5-3:arm64 depends on libssl3 (>= 3.0.0).
682s  libkmod2:arm64 depends on libssl3 (>= 3.0.0).
682s  libfido2-1:arm64 depends on libssl3 (>= 3.0.0).
682s  libcurl4:arm64 depends on libssl3 (>= 3.0.0).
682s  libcryptsetup12:arm64 depends on libssl3 (>= 3.0.0).
682s  kmod depends on libssl3 (>= 3.0.0).
682s  dhcpcd-base depends on libssl3 (>= 3.0.0).
682s  bind9-libs:arm64 depends on libssl3 (>= 3.0.0).
682s 
682s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74819 files and directories currently installed.)
682s Removing libssl3:arm64 (3.0.10-1ubuntu4) ...
682s Selecting previously unselected package libssl3t64:arm64.
682s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74808 files and directories currently installed.)
682s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_arm64.deb ...
682s Unpacking libssl3t64:arm64 (3.0.13-0ubuntu2) ...
682s Setting up libssl3t64:arm64 (3.0.13-0ubuntu2) ...
682s Setting up openssl (3.0.13-0ubuntu2) ...
682s Processing triggers for man-db (2.12.0-3) ...
682s Processing triggers for libc-bin (2.39-0ubuntu6) ...
683s Reading package lists...
683s Building dependency tree...
683s Reading state information...
684s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
684s sh: Attempting to set up Debian/Ubuntu apt sources automatically
684s sh: Distribution appears to be Ubuntu
685s Reading package lists...
685s Building dependency tree...
685s Reading state information...
686s eatmydata is already the newest version (131-1).
686s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
686s Reading package lists...
686s Building dependency tree...
686s Reading state information...
687s dbus is already the newest version (1.14.10-4ubuntu1).
687s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
687s Reading package lists...
688s Building dependency tree...
688s Reading state information...
688s rng-tools-debian is already the newest version (2.4).
688s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
688s Reading package lists...
689s Building dependency tree...
689s Reading state information...
689s The following packages will be REMOVED:
689s   cloud-init* python3-configobj* python3-debconf*
689s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
689s After this operation, 3256 kB disk space will be freed.
689s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74821 files and directories currently installed.)
689s Removing cloud-init (24.1.2-0ubuntu1) ...
690s Removing python3-configobj (5.0.8-3) ...
690s Removing python3-debconf (1.5.86) ...
690s Processing triggers for man-db (2.12.0-3) ...
690s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74432 files and directories currently installed.)
690s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ...
692s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
692s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
692s invoke-rc.d: policy-rc.d denied execution of try-restart.
692s Reading package lists...
692s Building dependency tree...
692s Reading state information...
693s linux-generic is already the newest version (6.8.0-11.11+1).
693s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
694s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
694s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
694s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
696s Reading package lists...
696s Reading package lists...
697s Building dependency tree...
697s Reading state information...
697s Calculating upgrade...
697s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
697s Reading package lists...
698s Building dependency tree...
698s Reading state information...
698s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
699s autopkgtest [16:59:58]: rebooting testbed after setup commands that affected boot
726s autopkgtest [17:00:25]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024
729s autopkgtest [17:00:28]: @@@@@@@@@@@@@@@@@@@@ apt-source gasic
732s Get:1 http://ftpmaster.internal/ubuntu noble/universe gasic 0.0.r19-8 (dsc) [2112 B]
732s Get:2 http://ftpmaster.internal/ubuntu noble/universe gasic 0.0.r19-8 (tar) [12.4 kB]
732s Get:3 http://ftpmaster.internal/ubuntu noble/universe gasic 0.0.r19-8 (diff) [7305 kB]
732s gpgv: Signature made Thu Dec 29 18:00:34 2022 UTC
732s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
732s gpgv:                issuer "tille@debian.org"
732s gpgv: Can't check signature: No public key
732s dpkg-source: warning: cannot verify inline signature for ./gasic_0.0.r19-8.dsc: no acceptable signature found
732s autopkgtest [17:00:31]: testing package gasic version 0.0.r19-8
733s autopkgtest [17:00:32]: build not needed
734s autopkgtest [17:00:33]: test run-unit-test: preparing testbed
743s Reading package lists...
743s Building dependency tree...
743s Reading state information...
744s Starting pkgProblemResolver with broken count: 0
744s Starting 2 pkgProblemResolver with broken count: 0
744s Done
744s The following additional packages will be installed:
744s   blt bowtie bowtie2 bwa fontconfig-config fonts-dejavu-core
744s   fonts-dejavu-extra fonts-dejavu-mono fonts-lyx fonts-urw-base35 gasic
744s   gasic-examples libblas3 libcairo2 libdeflate0 libfontconfig1 libfontenc1
744s   libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhts3 libhtscodecs2
744s   libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui
744s   liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libopenjp2-7 libpixman-1-0
744s   libpython3.11-minimal libpython3.11-stdlib libqhull-r8.0 libraqm0
744s   libsharpyuv0 libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3
744s   libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1
744s   python-matplotlib-data python3-appdirs python3-biopython python3-brotli
744s   python3-cairo python3-contourpy python3-cycler python3-dateutil
744s   python3-decorator python3-fonttools python3-freetype python3-fs
744s   python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib
744s   python3-mpmath python3-numpy python3-packaging python3-pil
744s   python3-pil.imagetk python3-pysam python3-reportlab python3-rlpycairo
744s   python3-scipy python3-sympy python3-tk python3-ufolib2 python3-unicodedata2
744s   python3.11 python3.11-minimal seqan-apps sgml-base tk8.6-blt2.5 unicode-data
744s   w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core
744s Suggested packages:
744s   blt-demo bowtie-examples bowtie2-examples samtools fonts-freefont-otf
744s   | fonts-freefont-ttf fonts-texgyre libjs-jquery-ui-docs liblcms2-utils
744s   tcl8.6 tk8.6 clustalo clustalw dialign dssp emboss fasttree mafft muscle3
744s   phylip phyml prank probcons python3-mysqldb python3-mmtf python3-rdflib
744s   python3-psycopg2 raxml t-coffee wise python-cycler-doc python-lxml-doc
744s   cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0
744s   inkscape ipython3 librsvg2-common python3-cairocffi python3-gi-cairo
744s   python3-gobject python3-pyqt5 python3-sip python3-tornado
744s   texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc
744s   gfortran python3-dev python3-pytest python-pil-doc pdf-viewer
744s   python3-egenix-mxtexttools python-reportlab-doc rl-accel rl-renderpm
744s   python-scipy-doc texlive-fonts-extra python-sympy-doc tix python3-tk-dbg
744s   python3.11-venv python3.11-doc binfmt-support cwltool | cwl-runner
744s   sgml-base-doc debhelper
744s Recommended packages:
744s   javascript-common python-biopython-doc ncbi-blast+ python3-bs4
744s   python3-cssselect python3-html5lib python3-olefile g++ | c++-compiler
744s   isympy-common
744s The following NEW packages will be installed:
744s   autopkgtest-satdep blt bowtie bowtie2 bwa fontconfig-config
744s   fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-lyx
744s   fonts-urw-base35 gasic gasic-examples libblas3 libcairo2 libdeflate0
744s   libfontconfig1 libfontenc1 libgfortran5 libgomp1 libgraphite2-3
744s   libharfbuzz0b libhts3 libhtscodecs2 libimagequant0 libjbig0 libjpeg-turbo8
744s   libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2
744s   liblerc4 libopenjp2-7 libpixman-1-0 libpython3.11-minimal
744s   libpython3.11-stdlib libqhull-r8.0 libraqm0 libsharpyuv0 libtcl8.6 libtiff6
744s   libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0
744s   libxft2 libxrender1 libxslt1.1 libxss1 python-matplotlib-data
744s   python3-appdirs python3-biopython python3-brotli python3-cairo
744s   python3-contourpy python3-cycler python3-dateutil python3-decorator
744s   python3-fonttools python3-freetype python3-fs python3-kiwisolver
744s   python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-numpy
744s   python3-packaging python3-pil python3-pil.imagetk python3-pysam
744s   python3-reportlab python3-rlpycairo python3-scipy python3-sympy python3-tk
744s   python3-ufolib2 python3-unicodedata2 python3.11 python3.11-minimal
744s   seqan-apps sgml-base tk8.6-blt2.5 unicode-data w3c-sgml-lib x11-common
744s   xfonts-encodings xfonts-utils xml-core
744s 0 upgraded, 93 newly installed, 0 to remove and 0 not upgraded.
744s Need to get 112 MB/112 MB of archives.
744s After this operation, 482 MB of additional disk space will be used.
744s Get:1 /tmp/autopkgtest.vS37oR/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B]
744s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.11-minimal arm64 3.11.8-1 [837 kB]
745s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 python3.11-minimal arm64 3.11.8-1 [2150 kB]
745s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 sgml-base all 1.31 [11.4 kB]
745s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.11-stdlib arm64 3.11.8-1 [1913 kB]
745s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 python3.11 arm64 3.11.8-1 [589 kB]
745s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB]
745s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
745s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
745s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 libfontenc1 arm64 1:1.1.8-1 [13.9 kB]
745s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
745s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB]
745s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 xfonts-utils arm64 1:7.7+6build2 [93.6 kB]
745s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-urw-base35 all 20200910-8 [11.0 MB]
745s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.15.0-1ubuntu1 [37.0 kB]
745s Get:16 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.15.0-1ubuntu1 [142 kB]
745s Get:17 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB]
745s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB]
745s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B]
745s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.14-1 [767 kB]
745s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7 [618 kB]
745s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 blt arm64 2.5.3+dfsg-7 [4826 B]
745s Get:23 http://ftpmaster.internal/ubuntu noble/universe arm64 bwa arm64 0.7.17-7 [192 kB]
745s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-extra all 2.37-8 [1947 kB]
746s Get:25 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lyx all 2.4.0~RC3-1 [170 kB]
746s Get:26 http://ftpmaster.internal/ubuntu noble/main arm64 python3-decorator all 5.1.1-5 [10.1 kB]
746s Get:27 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.12.0-3 [143 kB]
746s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB]
746s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.12.0-3 [2241 kB]
746s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 python3-numpy arm64 1:1.24.2-2 [4525 kB]
746s Get:31 http://ftpmaster.internal/ubuntu noble/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1 [27.7 kB]
746s Get:32 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-scipy arm64 1.11.4-6 [18.6 MB]
746s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 python3-tk arm64 3.11.5-1 [112 kB]
746s Get:34 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pil.imagetk arm64 10.2.0-1 [9708 B]
746s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 14-20240303-1ubuntu1 [144 kB]
746s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libimagequant0 arm64 2.18.0-1 [37.0 kB]
746s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB]
746s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
746s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 liblcms2-2 arm64 2.14-2 [159 kB]
746s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 libopenjp2-7 arm64 2.5.0-2 [170 kB]
746s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-2 [81.5 kB]
746s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.3.0-2 [463 kB]
746s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libraqm0 arm64 0.10.1-1 [14.4 kB]
746s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.19-1 [43.4 kB]
746s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB]
746s Get:46 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-4ubuntu1 [153 kB]
746s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.4 [14.4 kB]
746s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.4 [191 kB]
746s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-3ubuntu1 [226 kB]
746s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpdemux2 arm64 1.3.2-0.4 [12.3 kB]
746s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpmux3 arm64 1.3.2-0.4 [25.0 kB]
746s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 python3-pil arm64 10.2.0-1 [477 kB]
746s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libpixman-1-0 arm64 0.42.2-1 [193 kB]
746s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB]
746s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B]
746s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 libcairo2 arm64 1.18.0-1 [550 kB]
746s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 python3-cairo arm64 1.25.1-2 [153 kB]
746s Get:58 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-freetype all 2.4.0-1 [83.1 kB]
746s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-rlpycairo all 0.3.0-3 [9130 B]
746s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-reportlab all 4.1.0-1 [683 kB]
746s Get:61 http://ftpmaster.internal/ubuntu noble/main arm64 xml-core all 0.19 [20.3 kB]
746s Get:62 http://ftpmaster.internal/ubuntu noble/universe arm64 w3c-sgml-lib all 1.3-3 [280 kB]
746s Get:63 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-biopython arm64 1.81+dfsg-3 [1664 kB]
746s Get:64 http://ftpmaster.internal/ubuntu noble/universe arm64 libhtscodecs2 arm64 1.6.0-1 [78.1 kB]
746s Get:65 http://ftpmaster.internal/ubuntu noble/universe arm64 libhts3 arm64 1.18+ds-1 [422 kB]
746s Get:66 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pysam arm64 0.22.0+ds-1 [4399 kB]
747s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
747s Get:68 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
747s Get:69 http://ftpmaster.internal/ubuntu noble/universe arm64 python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB]
747s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 python3-dateutil all 2.8.2-3 [79.2 kB]
747s Get:71 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-contourpy arm64 1.0.7-1build2 [244 kB]
747s Get:72 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-cycler all 0.11.0-2 [8202 B]
747s Get:73 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-brotli arm64 1.1.0-2 [345 kB]
747s Get:74 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB]
747s Get:75 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-mpmath all 1.2.1-3 [421 kB]
747s Get:76 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-sympy all 1.12-7 [3966 kB]
747s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB]
747s Get:78 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fs all 2.4.16-3 [91.1 kB]
747s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 libxslt1.1 arm64 1.1.39-0exp1 [166 kB]
747s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 python3-lxml arm64 5.1.0-1 [2042 kB]
747s Get:81 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build2 [28.4 kB]
747s Get:82 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-unicodedata2 arm64 15.1.0+ds-1 [362 kB]
747s Get:83 http://ftpmaster.internal/ubuntu noble/universe arm64 unicode-data all 15.1.0-1 [8878 kB]
747s Get:84 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fonttools arm64 4.46.0-1 [1625 kB]
747s Get:85 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-kiwisolver arm64 1.4.4-2 [48.5 kB]
747s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 python3-packaging all 23.2-1 [40.6 kB]
747s Get:87 http://ftpmaster.internal/ubuntu noble/universe arm64 libqhull-r8.0 arm64 2020.2-6 [188 kB]
747s Get:88 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-matplotlib arm64 3.6.3-1ubuntu3 [7291 kB]
747s Get:89 http://ftpmaster.internal/ubuntu noble/universe arm64 bowtie arm64 1.3.1-3 [1346 kB]
747s Get:90 http://ftpmaster.internal/ubuntu noble/universe arm64 bowtie2 arm64 2.5.2-1 [1261 kB]
747s Get:91 http://ftpmaster.internal/ubuntu noble/universe arm64 seqan-apps arm64 2.4.0+dfsg-16 [11.8 MB]
748s Get:92 http://ftpmaster.internal/ubuntu noble/universe arm64 gasic all 0.0.r19-8 [21.1 kB]
748s Get:93 http://ftpmaster.internal/ubuntu noble/universe arm64 gasic-examples all 0.0.r19-8 [7270 kB]
748s Fetched 112 MB in 3s (32.4 MB/s)
748s Selecting previously unselected package libpython3.11-minimal:arm64.
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749s Preparing to unpack .../00-libpython3.11-minimal_3.11.8-1_arm64.deb ...
749s Unpacking libpython3.11-minimal:arm64 (3.11.8-1) ...
749s Selecting previously unselected package python3.11-minimal.
749s Preparing to unpack .../01-python3.11-minimal_3.11.8-1_arm64.deb ...
749s Unpacking python3.11-minimal (3.11.8-1) ...
749s Selecting previously unselected package sgml-base.
749s Preparing to unpack .../02-sgml-base_1.31_all.deb ...
749s Unpacking sgml-base (1.31) ...
749s Selecting previously unselected package libpython3.11-stdlib:arm64.
749s Preparing to unpack .../03-libpython3.11-stdlib_3.11.8-1_arm64.deb ...
749s Unpacking libpython3.11-stdlib:arm64 (3.11.8-1) ...
749s Selecting previously unselected package python3.11.
749s Preparing to unpack .../04-python3.11_3.11.8-1_arm64.deb ...
749s Unpacking python3.11 (3.11.8-1) ...
749s Selecting previously unselected package libtcl8.6:arm64.
749s Preparing to unpack .../05-libtcl8.6_8.6.13+dfsg-2_arm64.deb ...
749s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ...
749s Selecting previously unselected package fonts-dejavu-mono.
749s Preparing to unpack .../06-fonts-dejavu-mono_2.37-8_all.deb ...
749s Unpacking fonts-dejavu-mono (2.37-8) ...
749s Selecting previously unselected package fonts-dejavu-core.
749s Preparing to unpack .../07-fonts-dejavu-core_2.37-8_all.deb ...
749s Unpacking fonts-dejavu-core (2.37-8) ...
749s Selecting previously unselected package libfontenc1:arm64.
749s Preparing to unpack .../08-libfontenc1_1%3a1.1.8-1_arm64.deb ...
749s Unpacking libfontenc1:arm64 (1:1.1.8-1) ...
749s Selecting previously unselected package x11-common.
749s Preparing to unpack .../09-x11-common_1%3a7.7+23ubuntu2_all.deb ...
749s Unpacking x11-common (1:7.7+23ubuntu2) ...
749s Selecting previously unselected package xfonts-encodings.
749s Preparing to unpack .../10-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ...
749s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ...
749s Selecting previously unselected package xfonts-utils.
749s Preparing to unpack .../11-xfonts-utils_1%3a7.7+6build2_arm64.deb ...
749s Unpacking xfonts-utils (1:7.7+6build2) ...
749s Selecting previously unselected package fonts-urw-base35.
749s Preparing to unpack .../12-fonts-urw-base35_20200910-8_all.deb ...
749s Unpacking fonts-urw-base35 (20200910-8) ...
750s Selecting previously unselected package fontconfig-config.
750s Preparing to unpack .../13-fontconfig-config_2.15.0-1ubuntu1_arm64.deb ...
750s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
750s Selecting previously unselected package libfontconfig1:arm64.
750s Preparing to unpack .../14-libfontconfig1_2.15.0-1ubuntu1_arm64.deb ...
750s Unpacking libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
750s Selecting previously unselected package libxrender1:arm64.
750s Preparing to unpack .../15-libxrender1_1%3a0.9.10-1.1_arm64.deb ...
750s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ...
750s Selecting previously unselected package libxft2:arm64.
750s Preparing to unpack .../16-libxft2_2.3.6-1_arm64.deb ...
750s Unpacking libxft2:arm64 (2.3.6-1) ...
750s Selecting previously unselected package libxss1:arm64.
750s Preparing to unpack .../17-libxss1_1%3a1.2.3-1build2_arm64.deb ...
750s Unpacking libxss1:arm64 (1:1.2.3-1build2) ...
750s Selecting previously unselected package libtk8.6:arm64.
750s Preparing to unpack .../18-libtk8.6_8.6.14-1_arm64.deb ...
750s Unpacking libtk8.6:arm64 (8.6.14-1) ...
750s Selecting previously unselected package tk8.6-blt2.5.
750s Preparing to unpack .../19-tk8.6-blt2.5_2.5.3+dfsg-7_arm64.deb ...
750s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ...
750s Selecting previously unselected package blt.
750s Preparing to unpack .../20-blt_2.5.3+dfsg-7_arm64.deb ...
750s Unpacking blt (2.5.3+dfsg-7) ...
750s Selecting previously unselected package bwa.
750s Preparing to unpack .../21-bwa_0.7.17-7_arm64.deb ...
750s Unpacking bwa (0.7.17-7) ...
750s Selecting previously unselected package fonts-dejavu-extra.
750s Preparing to unpack .../22-fonts-dejavu-extra_2.37-8_all.deb ...
750s Unpacking fonts-dejavu-extra (2.37-8) ...
750s Selecting previously unselected package fonts-lyx.
750s Preparing to unpack .../23-fonts-lyx_2.4.0~RC3-1_all.deb ...
750s Unpacking fonts-lyx (2.4.0~RC3-1) ...
750s Selecting previously unselected package python3-decorator.
750s Preparing to unpack .../24-python3-decorator_5.1.1-5_all.deb ...
750s Unpacking python3-decorator (5.1.1-5) ...
750s Selecting previously unselected package libblas3:arm64.
750s Preparing to unpack .../25-libblas3_3.12.0-3_arm64.deb ...
750s Unpacking libblas3:arm64 (3.12.0-3) ...
750s Selecting previously unselected package libgfortran5:arm64.
750s Preparing to unpack .../26-libgfortran5_14-20240303-1ubuntu1_arm64.deb ...
750s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ...
750s Selecting previously unselected package liblapack3:arm64.
750s Preparing to unpack .../27-liblapack3_3.12.0-3_arm64.deb ...
750s Unpacking liblapack3:arm64 (3.12.0-3) ...
750s Selecting previously unselected package python3-numpy.
750s Preparing to unpack .../28-python3-numpy_1%3a1.24.2-2_arm64.deb ...
750s Unpacking python3-numpy (1:1.24.2-2) ...
751s Selecting previously unselected package liblbfgsb0:arm64.
751s Preparing to unpack .../29-liblbfgsb0_3.0+dfsg.4-1_arm64.deb ...
751s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1) ...
751s Selecting previously unselected package python3-scipy.
751s Preparing to unpack .../30-python3-scipy_1.11.4-6_arm64.deb ...
751s Unpacking python3-scipy (1.11.4-6) ...
751s Selecting previously unselected package python3-tk:arm64.
751s Preparing to unpack .../31-python3-tk_3.11.5-1_arm64.deb ...
751s Unpacking python3-tk:arm64 (3.11.5-1) ...
751s Selecting previously unselected package python3-pil.imagetk:arm64.
751s Preparing to unpack .../32-python3-pil.imagetk_10.2.0-1_arm64.deb ...
751s Unpacking python3-pil.imagetk:arm64 (10.2.0-1) ...
751s Selecting previously unselected package libgomp1:arm64.
751s Preparing to unpack .../33-libgomp1_14-20240303-1ubuntu1_arm64.deb ...
751s Unpacking libgomp1:arm64 (14-20240303-1ubuntu1) ...
751s Selecting previously unselected package libimagequant0:arm64.
751s Preparing to unpack .../34-libimagequant0_2.18.0-1_arm64.deb ...
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751s Selecting previously unselected package libjpeg-turbo8:arm64.
751s Preparing to unpack .../35-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ...
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751s Selecting previously unselected package libjpeg8:arm64.
751s Preparing to unpack .../36-libjpeg8_8c-2ubuntu11_arm64.deb ...
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751s Selecting previously unselected package liblcms2-2:arm64.
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751s Selecting previously unselected package libopenjp2-7:arm64.
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752s Unpacking libopenjp2-7:arm64 (2.5.0-2) ...
752s Selecting previously unselected package libgraphite2-3:arm64.
752s Preparing to unpack .../39-libgraphite2-3_1.3.14-2_arm64.deb ...
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752s Selecting previously unselected package libharfbuzz0b:arm64.
752s Preparing to unpack .../40-libharfbuzz0b_8.3.0-2_arm64.deb ...
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752s Selecting previously unselected package libraqm0:arm64.
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752s Selecting previously unselected package libdeflate0:arm64.
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752s Selecting previously unselected package libjbig0:arm64.
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752s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ...
752s Selecting previously unselected package liblerc4:arm64.
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752s Selecting previously unselected package libsharpyuv0:arm64.
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752s Selecting previously unselected package libwebp7:arm64.
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752s Selecting previously unselected package libtiff6:arm64.
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752s Selecting previously unselected package libwebpdemux2:arm64.
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752s Selecting previously unselected package libwebpmux3:arm64.
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752s Selecting previously unselected package python3-pil:arm64.
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752s Selecting previously unselected package libpixman-1-0:arm64.
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752s Selecting previously unselected package libxcb-render0:arm64.
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752s Selecting previously unselected package libxcb-shm0:arm64.
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752s Selecting previously unselected package libcairo2:arm64.
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752s Unpacking libcairo2:arm64 (1.18.0-1) ...
752s Selecting previously unselected package python3-cairo.
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752s Unpacking python3-cairo (1.25.1-2) ...
752s Selecting previously unselected package python3-freetype.
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752s Unpacking python3-freetype (2.4.0-1) ...
752s Selecting previously unselected package python3-rlpycairo.
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752s Unpacking python3-rlpycairo (0.3.0-3) ...
752s Selecting previously unselected package python3-reportlab.
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752s Unpacking python3-reportlab (4.1.0-1) ...
752s Selecting previously unselected package xml-core.
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752s Unpacking xml-core (0.19) ...
752s Selecting previously unselected package w3c-sgml-lib.
752s Preparing to unpack .../60-w3c-sgml-lib_1.3-3_all.deb ...
752s Unpacking w3c-sgml-lib (1.3-3) ...
752s Selecting previously unselected package python3-biopython.
752s Preparing to unpack .../61-python3-biopython_1.81+dfsg-3_arm64.deb ...
752s Unpacking python3-biopython (1.81+dfsg-3) ...
753s Selecting previously unselected package libhtscodecs2:arm64.
753s Preparing to unpack .../62-libhtscodecs2_1.6.0-1_arm64.deb ...
753s Unpacking libhtscodecs2:arm64 (1.6.0-1) ...
753s Selecting previously unselected package libhts3:arm64.
753s Preparing to unpack .../63-libhts3_1.18+ds-1_arm64.deb ...
753s Unpacking libhts3:arm64 (1.18+ds-1) ...
753s Selecting previously unselected package python3-pysam.
753s Preparing to unpack .../64-python3-pysam_0.22.0+ds-1_arm64.deb ...
753s Unpacking python3-pysam (0.22.0+ds-1) ...
753s Selecting previously unselected package libjs-jquery.
753s Preparing to unpack .../65-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
753s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
753s Selecting previously unselected package libjs-jquery-ui.
753s Preparing to unpack .../66-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
753s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
753s Selecting previously unselected package python-matplotlib-data.
753s Preparing to unpack .../67-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ...
753s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ...
753s Selecting previously unselected package python3-dateutil.
753s Preparing to unpack .../68-python3-dateutil_2.8.2-3_all.deb ...
753s Unpacking python3-dateutil (2.8.2-3) ...
753s Selecting previously unselected package python3-contourpy.
753s Preparing to unpack .../69-python3-contourpy_1.0.7-1build2_arm64.deb ...
753s Unpacking python3-contourpy (1.0.7-1build2) ...
753s Selecting previously unselected package python3-cycler.
753s Preparing to unpack .../70-python3-cycler_0.11.0-2_all.deb ...
753s Unpacking python3-cycler (0.11.0-2) ...
753s Selecting previously unselected package python3-brotli.
753s Preparing to unpack .../71-python3-brotli_1.1.0-2_arm64.deb ...
753s Unpacking python3-brotli (1.1.0-2) ...
753s Selecting previously unselected package python3-ufolib2.
753s Preparing to unpack .../72-python3-ufolib2_0.16.0+dfsg1-1_all.deb ...
753s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ...
753s Selecting previously unselected package python3-mpmath.
753s Preparing to unpack .../73-python3-mpmath_1.2.1-3_all.deb ...
753s Unpacking python3-mpmath (1.2.1-3) ...
753s Selecting previously unselected package python3-sympy.
753s Preparing to unpack .../74-python3-sympy_1.12-7_all.deb ...
753s Unpacking python3-sympy (1.12-7) ...
753s Selecting previously unselected package python3-appdirs.
753s Preparing to unpack .../75-python3-appdirs_1.4.4-4_all.deb ...
753s Unpacking python3-appdirs (1.4.4-4) ...
753s Selecting previously unselected package python3-fs.
753s Preparing to unpack .../76-python3-fs_2.4.16-3_all.deb ...
753s Unpacking python3-fs (2.4.16-3) ...
753s Selecting previously unselected package libxslt1.1:arm64.
753s Preparing to unpack .../77-libxslt1.1_1.1.39-0exp1_arm64.deb ...
753s Unpacking libxslt1.1:arm64 (1.1.39-0exp1) ...
753s Selecting previously unselected package python3-lxml:arm64.
753s Preparing to unpack .../78-python3-lxml_5.1.0-1_arm64.deb ...
753s Unpacking python3-lxml:arm64 (5.1.0-1) ...
754s Selecting previously unselected package python3-lz4.
754s Preparing to unpack .../79-python3-lz4_4.0.2+dfsg-1build2_arm64.deb ...
754s Unpacking python3-lz4 (4.0.2+dfsg-1build2) ...
754s Selecting previously unselected package python3-unicodedata2.
754s Preparing to unpack .../80-python3-unicodedata2_15.1.0+ds-1_arm64.deb ...
754s Unpacking python3-unicodedata2 (15.1.0+ds-1) ...
754s Selecting previously unselected package unicode-data.
754s Preparing to unpack .../81-unicode-data_15.1.0-1_all.deb ...
754s Unpacking unicode-data (15.1.0-1) ...
754s Selecting previously unselected package python3-fonttools.
754s Preparing to unpack .../82-python3-fonttools_4.46.0-1_arm64.deb ...
754s Unpacking python3-fonttools (4.46.0-1) ...
754s Selecting previously unselected package python3-kiwisolver.
754s Preparing to unpack .../83-python3-kiwisolver_1.4.4-2_arm64.deb ...
754s Unpacking python3-kiwisolver (1.4.4-2) ...
754s Selecting previously unselected package python3-packaging.
754s Preparing to unpack .../84-python3-packaging_23.2-1_all.deb ...
754s Unpacking python3-packaging (23.2-1) ...
754s Selecting previously unselected package libqhull-r8.0:arm64.
754s Preparing to unpack .../85-libqhull-r8.0_2020.2-6_arm64.deb ...
754s Unpacking libqhull-r8.0:arm64 (2020.2-6) ...
754s Selecting previously unselected package python3-matplotlib.
754s Preparing to unpack .../86-python3-matplotlib_3.6.3-1ubuntu3_arm64.deb ...
754s Unpacking python3-matplotlib (3.6.3-1ubuntu3) ...
754s Selecting previously unselected package bowtie.
754s Preparing to unpack .../87-bowtie_1.3.1-3_arm64.deb ...
754s Unpacking bowtie (1.3.1-3) ...
754s Selecting previously unselected package bowtie2.
754s Preparing to unpack .../88-bowtie2_2.5.2-1_arm64.deb ...
754s Unpacking bowtie2 (2.5.2-1) ...
754s Selecting previously unselected package seqan-apps.
754s Preparing to unpack .../89-seqan-apps_2.4.0+dfsg-16_arm64.deb ...
754s Unpacking seqan-apps (2.4.0+dfsg-16) ...
755s Selecting previously unselected package gasic.
755s Preparing to unpack .../90-gasic_0.0.r19-8_all.deb ...
755s Unpacking gasic (0.0.r19-8) ...
755s Selecting previously unselected package gasic-examples.
755s Preparing to unpack .../91-gasic-examples_0.0.r19-8_all.deb ...
755s Unpacking gasic-examples (0.0.r19-8) ...
755s Selecting previously unselected package autopkgtest-satdep.
755s Preparing to unpack .../92-1-autopkgtest-satdep.deb ...
755s Unpacking autopkgtest-satdep (0) ...
755s Setting up libhtscodecs2:arm64 (1.6.0-1) ...
755s Setting up libgraphite2-3:arm64 (1.3.14-2) ...
755s Setting up liblcms2-2:arm64 (2.14-2) ...
755s Setting up libpixman-1-0:arm64 (0.42.2-1) ...
755s Setting up libsharpyuv0:arm64 (1.3.2-0.4) ...
755s Setting up liblerc4:arm64 (4.0.0+ds-4ubuntu1) ...
755s Setting up bowtie (1.3.1-3) ...
755s Setting up libxrender1:arm64 (1:0.9.10-1.1) ...
755s Setting up python3-lz4 (4.0.2+dfsg-1build2) ...
755s Setting up libxcb-render0:arm64 (1.15-1) ...
755s Setting up bwa (0.7.17-7) ...
755s Setting up python3-unicodedata2 (15.1.0+ds-1) ...
755s Setting up fonts-lyx (2.4.0~RC3-1) ...
755s Setting up gasic-examples (0.0.r19-8) ...
755s Setting up x11-common (1:7.7+23ubuntu2) ...
756s Setting up libdeflate0:arm64 (1.19-1) ...
756s Setting up libqhull-r8.0:arm64 (2020.2-6) ...
756s Setting up libxcb-shm0:arm64 (1.15-1) ...
756s Setting up libgomp1:arm64 (14-20240303-1ubuntu1) ...
756s Setting up python3-freetype (2.4.0-1) ...
756s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ...
756s Setting up bowtie2 (2.5.2-1) ...
756s Setting up unicode-data (15.1.0-1) ...
756s Setting up python3-decorator (5.1.1-5) ...
756s Setting up libfontenc1:arm64 (1:1.1.8-1) ...
756s Setting up libblas3:arm64 (3.12.0-3) ...
756s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
756s Setting up python3-packaging (23.2-1) ...
756s Setting up python3-brotli (1.1.0-2) ...
756s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ...
756s Setting up python3-cycler (0.11.0-2) ...
756s Setting up libimagequant0:arm64 (2.18.0-1) ...
756s Setting up seqan-apps (2.4.0+dfsg-16) ...
756s Setting up fonts-dejavu-mono (2.37-8) ...
756s Setting up python3-kiwisolver (1.4.4-2) ...
756s Setting up libtcl8.6:arm64 (8.6.13+dfsg-2) ...
756s Setting up fonts-dejavu-core (2.37-8) ...
756s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ...
756s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ...
756s Setting up libwebp7:arm64 (1.3.2-0.4) ...
756s Setting up fonts-dejavu-extra (2.37-8) ...
756s Setting up libxslt1.1:arm64 (1.1.39-0exp1) ...
756s Setting up libopenjp2-7:arm64 (2.5.0-2) ...
756s Setting up libharfbuzz0b:arm64 (8.3.0-2) ...
756s Setting up python3-dateutil (2.8.2-3) ...
757s Setting up sgml-base (1.31) ...
757s Setting up libpython3.11-minimal:arm64 (3.11.8-1) ...
757s Setting up libxss1:arm64 (1:1.2.3-1build2) ...
757s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
757s Setting up python3-mpmath (1.2.1-3) ...
757s Setting up python-matplotlib-data (3.6.3-1ubuntu3) ...
757s Setting up libwebpmux3:arm64 (1.3.2-0.4) ...
757s Setting up python3-appdirs (1.4.4-4) ...
757s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
757s Setting up python3.11-minimal (3.11.8-1) ...
758s Setting up python3-sympy (1.12-7) ...
763s Setting up liblapack3:arm64 (3.12.0-3) ...
763s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
763s Setting up libhts3:arm64 (1.18+ds-1) ...
763s Setting up python3-pysam (0.22.0+ds-1) ...
763s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
763s Setting up libwebpdemux2:arm64 (1.3.2-0.4) ...
763s Setting up libpython3.11-stdlib:arm64 (3.11.8-1) ...
763s Setting up xfonts-utils (1:7.7+6build2) ...
763s Setting up python3-fs (2.4.16-3) ...
763s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
763s Setting up libraqm0:arm64 (0.10.1-1) ...
763s Setting up python3-lxml:arm64 (5.1.0-1) ...
763s Setting up libtiff6:arm64 (4.5.1+git230720-3ubuntu1) ...
763s Setting up xml-core (0.19) ...
763s Setting up libfontconfig1:arm64 (2.15.0-1ubuntu1) ...
763s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1) ...
763s Setting up python3.11 (3.11.8-1) ...
764s Setting up libxft2:arm64 (2.3.6-1) ...
764s Setting up libtk8.6:arm64 (8.6.14-1) ...
764s Setting up fonts-urw-base35 (20200910-8) ...
764s Setting up libcairo2:arm64 (1.18.0-1) ...
764s Setting up python3-pil:arm64 (10.2.0-1) ...
765s Setting up python3-numpy (1:1.24.2-2) ...
767s Setting up python3-contourpy (1.0.7-1build2) ...
767s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ...
767s Setting up python3-scipy (1.11.4-6) ...
769s Setting up python3-cairo (1.25.1-2) ...
770s Setting up blt (2.5.3+dfsg-7) ...
770s Setting up python3-tk:arm64 (3.11.5-1) ...
770s Setting up python3-pil.imagetk:arm64 (10.2.0-1) ...
770s Setting up python3-rlpycairo (0.3.0-3) ...
770s Setting up python3-reportlab (4.1.0-1) ...
771s Setting up python3-fonttools (4.46.0-1) ...
771s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ...
772s Setting up python3-matplotlib (3.6.3-1ubuntu3) ...
773s Processing triggers for libc-bin (2.39-0ubuntu6) ...
773s Processing triggers for systemd (255.2-3ubuntu2) ...
773s Processing triggers for man-db (2.12.0-3) ...
774s Processing triggers for sgml-base (1.31) ...
774s Setting up w3c-sgml-lib (1.3-3) ...
799s Setting up python3-biopython (1.81+dfsg-3) ...
799s Setting up gasic (0.0.r19-8) ...
800s Setting up autopkgtest-satdep (0) ...
804s (Reading database ... 84635 files and directories currently installed.)
804s Removing autopkgtest-satdep (0) ...
805s autopkgtest [17:01:44]: test run-unit-test: [-----------------------
805s Test 0: Create Genome Indices
805s [bwa_index] Pack FASTA... 0.01 sec
805s [bwa_index] Construct BWT for the packed sequence...
805s [bwa_index] 0.00 seconds elapse.
805s [bwa_index] Update BWT... 0.00 sec
805s [bwa_index] Pack forward-only FASTA... 0.00 sec
805s [bwa_index] Construct SA from BWT and Occ... 0.00 sec
805s [main] Version: 0.7.17-r1188
805s [main] CMD: bwa index dwv.fasta
805s [main] Real time: 0.053 sec; CPU: 0.053 sec
805s [bwa_index] Pack FASTA... 0.00 sec
805s [bwa_index] Construct BWT for the packed sequence...
805s [bwa_index] 0.00 seconds elapse.
805s [bwa_index] Update BWT... 0.00 sec
805s [bwa_index] Pack forward-only FASTA... 0.00 sec
805s [bwa_index] Construct SA from BWT and Occ... 0.00 sec
805s [main] Version: 0.7.17-r1188
805s [main] CMD: bwa index vdv1.fasta
805s [main] Real time: 0.054 sec; CPU: 0.005 sec
805s [bwa_index] Pack FASTA... 0.00 sec
805s [bwa_index] Construct BWT for the packed sequence...
805s [bwa_index] 0.00 seconds elapse.
805s [bwa_index] Update BWT... 0.00 sec
805s [bwa_index] Pack forward-only FASTA... 0.00 sec
805s [bwa_index] Construct SA from BWT and Occ... 0.00 sec
805s [main] Version: 0.7.17-r1188
805s [main] CMD: bwa index vdv1dwv9.fasta
805s [main] Real time: 0.057 sec; CPU: 0.004 sec
805s [bwa_index] Pack FASTA... 0.00 sec
805s [bwa_index] Construct BWT for the packed sequence...
805s [bwa_index] 0.00 seconds elapse.
805s [bwa_index] Update BWT... 0.00 sec
805s [bwa_index] Pack forward-only FASTA... 0.00 sec
805s [bwa_index] Construct SA from BWT and Occ... 0.00 sec
805s [main] Version: 0.7.17-r1188
805s [main] CMD: bwa index vdv1dwv5.fasta
805s [main] Real time: 0.018 sec; CPU: 0.005 sec
805s Passed
805s 
805s Test 1: run_mappers
805s [bwa_aln] 17bp reads: max_diff = 2
805s [bwa_aln] 38bp reads: max_diff = 3
805s [bwa_aln] 64bp reads: max_diff = 4
805s [bwa_aln] 93bp reads: max_diff = 5
805s [bwa_aln] 124bp reads: max_diff = 6
805s [bwa_aln] 157bp reads: max_diff = 7
805s [bwa_aln] 190bp reads: max_diff = 8
805s [bwa_aln] 225bp reads: max_diff = 9
807s [bwa_aln_core] calculate SA coordinate... 0.97 sec
807s [bwa_aln_core] write to the disk... 0.01 sec
807s [bwa_aln_core] 100000 sequences have been processed.
807s [main] Version: 0.7.17-r1188
807s [main] CMD: bwa aln ./genomes/dwv.fasta reads/SRR059298_subset.fastq
807s [main] Real time: 1.108 sec; CPU: 1.102 sec
807s [bwa_aln_core] convert to sequence coordinate... 0.08 sec
807s [bwa_aln_core] refine gapped alignments... 0.04 sec
807s [bwa_aln_core] print alignments... 0.08 sec
807s [bwa_aln_core] 100000 sequences have been processed.
807s [main] Version: 0.7.17-r1188
807s [main] CMD: bwa samse ./genomes/dwv.fasta /tmp/res.sai reads/SRR059298_subset.fastq
807s [main] Real time: 0.319 sec; CPU: 0.310 sec
807s [bwa_aln] 17bp reads: max_diff = 2
807s [bwa_aln] 38bp reads: max_diff = 3
807s [bwa_aln] 64bp reads: max_diff = 4
807s [bwa_aln] 93bp reads: max_diff = 5
807s [bwa_aln] 124bp reads: max_diff = 6
807s [bwa_aln] 157bp reads: max_diff = 7
807s [bwa_aln] 190bp reads: max_diff = 8
807s [bwa_aln] 225bp reads: max_diff = 9
808s [bwa_aln_core] calculate SA coordinate... 0.76 sec
808s [bwa_aln_core] write to the disk... 0.01 sec
808s [bwa_aln_core] 100000 sequences have been processed.
808s [main] Version: 0.7.17-r1188
808s [main] CMD: bwa aln ./genomes/vdv1.fasta reads/SRR059298_subset.fastq
808s [main] Real time: 0.881 sec; CPU: 0.876 sec
808s [bwa_aln_core] convert to sequence coordinate... 0.04 sec
808s [bwa_aln_core] refine gapped alignments... 0.02 sec
808s [bwa_aln_core] print alignments... 0.07 sec
808s [bwa_aln_core] 100000 sequences have been processed.
808s [main] Version: 0.7.17-r1188
808s [main] CMD: bwa samse ./genomes/vdv1.fasta /tmp/res.sai reads/SRR059298_subset.fastq
808s [main] Real time: 0.268 sec; CPU: 0.254 sec
808s [bwa_aln] 17bp reads: max_diff = 2
808s [bwa_aln] 38bp reads: max_diff = 3
808s [bwa_aln] 64bp reads: max_diff = 4
808s [bwa_aln] 93bp reads: max_diff = 5
808s [bwa_aln] 124bp reads: max_diff = 6
808s [bwa_aln] 157bp reads: max_diff = 7
808s [bwa_aln] 190bp reads: max_diff = 8
808s [bwa_aln] 225bp reads: max_diff = 9
809s [bwa_aln_core] calculate SA coordinate... 1.20 sec
809s [bwa_aln_core] write to the disk... 0.01 sec
809s [bwa_aln_core] 100000 sequences have been processed.
809s [main] Version: 0.7.17-r1188
809s [main] CMD: bwa aln ./genomes/vdv1dwv5.fasta reads/SRR059298_subset.fastq
809s [main] Real time: 1.321 sec; CPU: 1.313 sec
810s [bwa_aln_core] convert to sequence coordinate... 0.11 sec
810s [bwa_aln_core] refine gapped alignments... 0.04 sec
810s [bwa_aln_core] print alignments... 0.10 sec
810s [bwa_aln_core] 100000 sequences have been processed.
810s [main] Version: 0.7.17-r1188
810s [main] CMD: bwa samse ./genomes/vdv1dwv5.fasta /tmp/res.sai reads/SRR059298_subset.fastq
810s [main] Real time: 0.363 sec; CPU: 0.352 sec
810s [bwa_aln] 17bp reads: max_diff = 2
810s [bwa_aln] 38bp reads: max_diff = 3
810s [bwa_aln] 64bp reads: max_diff = 4
810s [bwa_aln] 93bp reads: max_diff = 5
810s [bwa_aln] 124bp reads: max_diff = 6
810s [bwa_aln] 157bp reads: max_diff = 7
810s [bwa_aln] 190bp reads: max_diff = 8
810s [bwa_aln] 225bp reads: max_diff = 9
811s [bwa_aln_core] calculate SA coordinate... 1.10 sec
811s [bwa_aln_core] write to the disk... 0.02 sec
811s [bwa_aln_core] 100000 sequences have been processed.
811s [main] Version: 0.7.17-r1188
811s [main] CMD: bwa aln ./genomes/vdv1dwv9.fasta reads/SRR059298_subset.fastq
811s [main] Real time: 1.262 sec; CPU: 1.255 sec
811s [bwa_aln_core] convert to sequence coordinate... 0.09 sec
811s [bwa_aln_core] refine gapped alignments... 0.03 sec
811s [bwa_aln_core] print alignments... 0.09 sec
811s [bwa_aln_core] 100000 sequences have been processed.
811s [main] Version: 0.7.17-r1188
811s [main] CMD: bwa samse ./genomes/vdv1dwv9.fasta /tmp/res.sai reads/SRR059298_subset.fastq
811s [main] Real time: 0.333 sec; CPU: 0.321 sec
811s --- mapping reads with bwa to ./genomes/dwv.fasta
811s Executing: bwa aln  ./genomes/dwv.fasta reads/SRR059298_subset.fastq > /tmp/res.sai
811s --- mapping reads with bwa to ./genomes/vdv1.fasta
811s Executing: bwa aln  ./genomes/vdv1.fasta reads/SRR059298_subset.fastq > /tmp/res.sai
811s --- mapping reads with bwa to ./genomes/vdv1dwv5.fasta
811s Executing: bwa aln  ./genomes/vdv1dwv5.fasta reads/SRR059298_subset.fastq > /tmp/res.sai
811s --- mapping reads with bwa to ./genomes/vdv1dwv9.fasta
811s Executing: bwa aln  ./genomes/vdv1dwv9.fasta reads/SRR059298_subset.fastq > /tmp/res.sai
811s 
811s Mapping done.
811s 
811s Passed
811s 
811s Test 2: create_matrix
812s MASON SIMULATOR
812s ===============
812s 
812s ____INITIALIZING______________________________________________________________
812s 
812s Opening reference and variants file ... OK
812s Initializing fragment-to-contig distribution ... OK
812s Initializing simulation threads ... OK
812s Opening output file ./SAM/dwv.fastq ... OK
812s 
812s ____READ SIMULATION___________________________________________________________
812s 
812s Distributing fragments to 1 contigs (1 haplotypes each) ... OK
812s 
812s Simulating Reads:
812s   gi|71480055|ref|NC_004830.2| (allele 1) .. (10000 fragments) OK
812s   Done simulating reads.
812s 
812s Joining temporary files ... OK
812s rm: cannot remove './SAM/dwv.fastq.sam': No such file or directory
812s MASON SIMULATOR
812s ===============
812s 
812s ____INITIALIZING______________________________________________________________
812s 
812s Opening reference and variants file ... OK
812s Initializing fragment-to-contig distribution ... OK
812s Initializing simulation threads ... OK
812s Opening output file ./SAM/vdv1.fastq ... OK
812s 
812s ____READ SIMULATION___________________________________________________________
812s 
812s Distributing fragments to 1 contigs (1 haplotypes each) ... OK
812s 
812s Simulating Reads:
812s   gi|56121875|ref|NC_006494.1| (allele 1) .. (10000 fragments) OK
812s   Done simulating reads.
812s 
812s Joining temporary files ... OK
812s rm: cannot remove './SAM/vdv1.fastq.sam': No such file or directory
812s MASON SIMULATOR
812s ===============
812s 
812s ____INITIALIZING______________________________________________________________
812s 
812s Opening reference and variants file ... OK
812s Initializing fragment-to-contig distribution ... OK
812s Initializing simulation threads ... OK
812s Opening output file ./SAM/vdv1dwv5.fastq ... OK
812s 
812s ____READ SIMULATION___________________________________________________________
812s 
812s Distributing fragments to 1 contigs (1 haplotypes each) ... OK
812s 
812s Simulating Reads:
812s   gi|301070167|gb|HM067437.1| (allele 1) .. (10000 fragments) OK
812s   Done simulating reads.
812s 
812s Joining temporary files ... OK
812s rm: cannot remove './SAM/vdv1dwv5.fastq.sam': No such file or directory
812s MASON SIMULATOR
812s ===============
812s 
812s ____INITIALIZING______________________________________________________________
812s 
812s Opening reference and variants file ... OK
812s Initializing fragment-to-contig distribution ... OK
812s Initializing simulation threads ... OK
812s Opening output file ./SAM/vdv1dwv9.fastq ... OK
812s 
812s ____READ SIMULATION___________________________________________________________
812s 
812s Distributing fragments to 1 contigs (1 haplotypes each) ... OK
812s 
812s Simulating Reads:
812s   gi|301070169|gb|HM067438.1| (allele 1) .. (10000 fragments) OK
812s   Done simulating reads.
812s 
812s Joining temporary files ... OK
812s rm: cannot remove './SAM/vdv1dwv9.fastq.sam': No such file or directory
812s [bwa_aln] 17bp reads: max_diff = 2
812s [bwa_aln] 38bp reads: max_diff = 3
812s [bwa_aln] 64bp reads: max_diff = 4
812s [bwa_aln] 93bp reads: max_diff = 5
812s [bwa_aln] 124bp reads: max_diff = 6
812s [bwa_aln] 157bp reads: max_diff = 7
812s [bwa_aln] 190bp reads: max_diff = 8
812s [bwa_aln] 225bp reads: max_diff = 9
813s [bwa_aln_core] calculate SA coordinate... 0.13 sec
813s [bwa_aln_core] write to the disk... 0.00 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa aln genomes/dwv.fasta ./SAM/dwv.fastq
813s [main] Real time: 0.140 sec; CPU: 0.135 sec
813s [bwa_aln_core] convert to sequence coordinate... 0.02 sec
813s [bwa_aln_core] refine gapped alignments... 0.01 sec
813s [bwa_aln_core] print alignments... 0.01 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa samse genomes/dwv.fasta /tmp/res.sai ./SAM/dwv.fastq
813s [main] Real time: 0.051 sec; CPU: 0.044 sec
813s [bwa_aln] 17bp reads: max_diff = 2
813s [bwa_aln] 38bp reads: max_diff = 3
813s [bwa_aln] 64bp reads: max_diff = 4
813s [bwa_aln] 93bp reads: max_diff = 5
813s [bwa_aln] 124bp reads: max_diff = 6
813s [bwa_aln] 157bp reads: max_diff = 7
813s [bwa_aln] 190bp reads: max_diff = 8
813s [bwa_aln] 225bp reads: max_diff = 9
813s [bwa_aln_core] calculate SA coordinate... 0.04 sec
813s [bwa_aln_core] write to the disk... 0.00 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa aln genomes/vdv1.fasta ./SAM/dwv.fastq
813s [main] Real time: 0.052 sec; CPU: 0.048 sec
813s [bwa_aln_core] convert to sequence coordinate... 0.00 sec
813s [bwa_aln_core] refine gapped alignments... 0.00 sec
813s [bwa_aln_core] print alignments... 0.00 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa samse genomes/vdv1.fasta /tmp/res.sai ./SAM/dwv.fastq
813s [main] Real time: 0.021 sec; CPU: 0.015 sec
813s [bwa_aln] 17bp reads: max_diff = 2
813s [bwa_aln] 38bp reads: max_diff = 3
813s [bwa_aln] 64bp reads: max_diff = 4
813s [bwa_aln] 93bp reads: max_diff = 5
813s [bwa_aln] 124bp reads: max_diff = 6
813s [bwa_aln] 157bp reads: max_diff = 7
813s [bwa_aln] 190bp reads: max_diff = 8
813s [bwa_aln] 225bp reads: max_diff = 9
813s [bwa_aln_core] calculate SA coordinate... 0.08 sec
813s [bwa_aln_core] write to the disk... 0.00 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa aln genomes/vdv1dwv5.fasta ./SAM/dwv.fastq
813s [main] Real time: 0.094 sec; CPU: 0.090 sec
813s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
813s [bwa_aln_core] refine gapped alignments... 0.00 sec
813s [bwa_aln_core] print alignments... 0.01 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa samse genomes/vdv1dwv5.fasta /tmp/res.sai ./SAM/dwv.fastq
813s [main] Real time: 0.042 sec; CPU: 0.028 sec
813s [bwa_aln] 17bp reads: max_diff = 2
813s [bwa_aln] 38bp reads: max_diff = 3
813s [bwa_aln] 64bp reads: max_diff = 4
813s [bwa_aln] 93bp reads: max_diff = 5
813s [bwa_aln] 124bp reads: max_diff = 6
813s [bwa_aln] 157bp reads: max_diff = 7
813s [bwa_aln] 190bp reads: max_diff = 8
813s [bwa_aln] 225bp reads: max_diff = 9
813s [bwa_aln_core] calculate SA coordinate... 0.08 sec
813s [bwa_aln_core] write to the disk... 0.00 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa aln genomes/vdv1dwv9.fasta ./SAM/dwv.fastq
813s [main] Real time: 0.091 sec; CPU: 0.089 sec
813s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
813s [bwa_aln_core] refine gapped alignments... 0.00 sec
813s [bwa_aln_core] print alignments... 0.01 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa samse genomes/vdv1dwv9.fasta /tmp/res.sai ./SAM/dwv.fastq
813s [main] Real time: 0.039 sec; CPU: 0.030 sec
813s [bwa_aln] 17bp reads: max_diff = 2
813s [bwa_aln] 38bp reads: max_diff = 3
813s [bwa_aln] 64bp reads: max_diff = 4
813s [bwa_aln] 93bp reads: max_diff = 5
813s [bwa_aln] 124bp reads: max_diff = 6
813s [bwa_aln] 157bp reads: max_diff = 7
813s [bwa_aln] 190bp reads: max_diff = 8
813s [bwa_aln] 225bp reads: max_diff = 9
813s [bwa_aln_core] calculate SA coordinate... 0.04 sec
813s [bwa_aln_core] write to the disk... 0.00 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa aln genomes/dwv.fasta ./SAM/vdv1.fastq
813s [main] Real time: 0.052 sec; CPU: 0.049 sec
813s [bwa_aln_core] convert to sequence coordinate... 0.00 sec
813s [bwa_aln_core] refine gapped alignments... 0.00 sec
813s [bwa_aln_core] print alignments... 0.00 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa samse genomes/dwv.fasta /tmp/res.sai ./SAM/vdv1.fastq
813s [main] Real time: 0.022 sec; CPU: 0.015 sec
813s [bwa_aln] 17bp reads: max_diff = 2
813s [bwa_aln] 38bp reads: max_diff = 3
813s [bwa_aln] 64bp reads: max_diff = 4
813s [bwa_aln] 93bp reads: max_diff = 5
813s [bwa_aln] 124bp reads: max_diff = 6
813s [bwa_aln] 157bp reads: max_diff = 7
813s [bwa_aln] 190bp reads: max_diff = 8
813s [bwa_aln] 225bp reads: max_diff = 9
813s [bwa_aln_core] calculate SA coordinate... 0.12 sec
813s [bwa_aln_core] write to the disk... 0.00 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa aln genomes/vdv1.fasta ./SAM/vdv1.fastq
813s [main] Real time: 0.151 sec; CPU: 0.133 sec
813s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
813s [bwa_aln_core] refine gapped alignments... 0.01 sec
813s [bwa_aln_core] print alignments... 0.01 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa samse genomes/vdv1.fasta /tmp/res.sai ./SAM/vdv1.fastq
813s [main] Real time: 0.052 sec; CPU: 0.043 sec
813s [bwa_aln] 17bp reads: max_diff = 2
813s [bwa_aln] 38bp reads: max_diff = 3
813s [bwa_aln] 64bp reads: max_diff = 4
813s [bwa_aln] 93bp reads: max_diff = 5
813s [bwa_aln] 124bp reads: max_diff = 6
813s [bwa_aln] 157bp reads: max_diff = 7
813s [bwa_aln] 190bp reads: max_diff = 8
813s [bwa_aln] 225bp reads: max_diff = 9
813s [bwa_aln_core] calculate SA coordinate... 0.09 sec
813s [bwa_aln_core] write to the disk... 0.00 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa aln genomes/vdv1dwv5.fasta ./SAM/vdv1.fastq
813s [main] Real time: 0.101 sec; CPU: 0.097 sec
813s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
813s [bwa_aln_core] refine gapped alignments... 0.00 sec
813s [bwa_aln_core] print alignments... 0.01 sec
813s [bwa_aln_core] 10000 sequences have been processed.
813s [main] Version: 0.7.17-r1188
813s [main] CMD: bwa samse genomes/vdv1dwv5.fasta /tmp/res.sai ./SAM/vdv1.fastq
813s [main] Real time: 0.036 sec; CPU: 0.030 sec
813s [bwa_aln] 17bp reads: max_diff = 2
813s [bwa_aln] 38bp reads: max_diff = 3
813s [bwa_aln] 64bp reads: max_diff = 4
813s [bwa_aln] 93bp reads: max_diff = 5
813s [bwa_aln] 124bp reads: max_diff = 6
813s [bwa_aln] 157bp reads: max_diff = 7
813s [bwa_aln] 190bp reads: max_diff = 8
813s [bwa_aln] 225bp reads: max_diff = 9
814s [bwa_aln_core] calculate SA coordinate... 0.09 sec
814s [bwa_aln_core] write to the disk... 0.00 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa aln genomes/vdv1dwv9.fasta ./SAM/vdv1.fastq
814s [main] Real time: 0.102 sec; CPU: 0.098 sec
814s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
814s [bwa_aln_core] refine gapped alignments... 0.00 sec
814s [bwa_aln_core] print alignments... 0.01 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa samse genomes/vdv1dwv9.fasta /tmp/res.sai ./SAM/vdv1.fastq
814s [main] Real time: 0.037 sec; CPU: 0.032 sec
814s [bwa_aln] 17bp reads: max_diff = 2
814s [bwa_aln] 38bp reads: max_diff = 3
814s [bwa_aln] 64bp reads: max_diff = 4
814s [bwa_aln] 93bp reads: max_diff = 5
814s [bwa_aln] 124bp reads: max_diff = 6
814s [bwa_aln] 157bp reads: max_diff = 7
814s [bwa_aln] 190bp reads: max_diff = 8
814s [bwa_aln] 225bp reads: max_diff = 9
814s [bwa_aln_core] calculate SA coordinate... 0.08 sec
814s [bwa_aln_core] write to the disk... 0.00 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa aln genomes/dwv.fasta ./SAM/vdv1dwv5.fastq
814s [main] Real time: 0.095 sec; CPU: 0.091 sec
814s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
814s [bwa_aln_core] refine gapped alignments... 0.00 sec
814s [bwa_aln_core] print alignments... 0.01 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa samse genomes/dwv.fasta /tmp/res.sai ./SAM/vdv1dwv5.fastq
814s [main] Real time: 0.034 sec; CPU: 0.028 sec
814s [bwa_aln] 17bp reads: max_diff = 2
814s [bwa_aln] 38bp reads: max_diff = 3
814s [bwa_aln] 64bp reads: max_diff = 4
814s [bwa_aln] 93bp reads: max_diff = 5
814s [bwa_aln] 124bp reads: max_diff = 6
814s [bwa_aln] 157bp reads: max_diff = 7
814s [bwa_aln] 190bp reads: max_diff = 8
814s [bwa_aln] 225bp reads: max_diff = 9
814s [bwa_aln_core] calculate SA coordinate... 0.09 sec
814s [bwa_aln_core] write to the disk... 0.00 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa aln genomes/vdv1.fasta ./SAM/vdv1dwv5.fastq
814s [main] Real time: 0.100 sec; CPU: 0.097 sec
814s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
814s [bwa_aln_core] refine gapped alignments... 0.00 sec
814s [bwa_aln_core] print alignments... 0.01 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa samse genomes/vdv1.fasta /tmp/res.sai ./SAM/vdv1dwv5.fastq
814s [main] Real time: 0.037 sec; CPU: 0.030 sec
814s [bwa_aln] 17bp reads: max_diff = 2
814s [bwa_aln] 38bp reads: max_diff = 3
814s [bwa_aln] 64bp reads: max_diff = 4
814s [bwa_aln] 93bp reads: max_diff = 5
814s [bwa_aln] 124bp reads: max_diff = 6
814s [bwa_aln] 157bp reads: max_diff = 7
814s [bwa_aln] 190bp reads: max_diff = 8
814s [bwa_aln] 225bp reads: max_diff = 9
814s [bwa_aln_core] calculate SA coordinate... 0.12 sec
814s [bwa_aln_core] write to the disk... 0.00 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa aln genomes/vdv1dwv5.fasta ./SAM/vdv1dwv5.fastq
814s [main] Real time: 0.136 sec; CPU: 0.133 sec
814s [bwa_aln_core] convert to sequence coordinate... 0.02 sec
814s [bwa_aln_core] refine gapped alignments... 0.00 sec
814s [bwa_aln_core] print alignments... 0.01 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa samse genomes/vdv1dwv5.fasta /tmp/res.sai ./SAM/vdv1dwv5.fastq
814s [main] Real time: 0.049 sec; CPU: 0.043 sec
814s [bwa_aln] 17bp reads: max_diff = 2
814s [bwa_aln] 38bp reads: max_diff = 3
814s [bwa_aln] 64bp reads: max_diff = 4
814s [bwa_aln] 93bp reads: max_diff = 5
814s [bwa_aln] 124bp reads: max_diff = 6
814s [bwa_aln] 157bp reads: max_diff = 7
814s [bwa_aln] 190bp reads: max_diff = 8
814s [bwa_aln] 225bp reads: max_diff = 9
814s [bwa_aln_core] calculate SA coordinate... 0.11 sec
814s [bwa_aln_core] write to the disk... 0.00 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa aln genomes/vdv1dwv9.fasta ./SAM/vdv1dwv5.fastq
814s [main] Real time: 0.126 sec; CPU: 0.123 sec
814s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
814s [bwa_aln_core] refine gapped alignments... 0.00 sec
814s [bwa_aln_core] print alignments... 0.01 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa samse genomes/vdv1dwv9.fasta /tmp/res.sai ./SAM/vdv1dwv5.fastq
814s [main] Real time: 0.042 sec; CPU: 0.037 sec
814s [bwa_aln] 17bp reads: max_diff = 2
814s [bwa_aln] 38bp reads: max_diff = 3
814s [bwa_aln] 64bp reads: max_diff = 4
814s [bwa_aln] 93bp reads: max_diff = 5
814s [bwa_aln] 124bp reads: max_diff = 6
814s [bwa_aln] 157bp reads: max_diff = 7
814s [bwa_aln] 190bp reads: max_diff = 8
814s [bwa_aln] 225bp reads: max_diff = 9
814s [bwa_aln_core] calculate SA coordinate... 0.08 sec
814s [bwa_aln_core] write to the disk... 0.00 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa aln genomes/dwv.fasta ./SAM/vdv1dwv9.fastq
814s [main] Real time: 0.095 sec; CPU: 0.090 sec
814s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
814s [bwa_aln_core] refine gapped alignments... 0.00 sec
814s [bwa_aln_core] print alignments... 0.01 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa samse genomes/dwv.fasta /tmp/res.sai ./SAM/vdv1dwv9.fastq
814s [main] Real time: 0.033 sec; CPU: 0.028 sec
814s [bwa_aln] 17bp reads: max_diff = 2
814s [bwa_aln] 38bp reads: max_diff = 3
814s [bwa_aln] 64bp reads: max_diff = 4
814s [bwa_aln] 93bp reads: max_diff = 5
814s [bwa_aln] 124bp reads: max_diff = 6
814s [bwa_aln] 157bp reads: max_diff = 7
814s [bwa_aln] 190bp reads: max_diff = 8
814s [bwa_aln] 225bp reads: max_diff = 9
814s [bwa_aln_core] calculate SA coordinate... 0.09 sec
814s [bwa_aln_core] write to the disk... 0.00 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa aln genomes/vdv1.fasta ./SAM/vdv1dwv9.fastq
814s [main] Real time: 0.104 sec; CPU: 0.101 sec
814s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
814s [bwa_aln_core] refine gapped alignments... 0.00 sec
814s [bwa_aln_core] print alignments... 0.01 sec
814s [bwa_aln_core] 10000 sequences have been processed.
814s [main] Version: 0.7.17-r1188
814s [main] CMD: bwa samse genomes/vdv1.fasta /tmp/res.sai ./SAM/vdv1dwv9.fastq
814s [main] Real time: 0.035 sec; CPU: 0.032 sec
814s [bwa_aln] 17bp reads: max_diff = 2
814s [bwa_aln] 38bp reads: max_diff = 3
814s [bwa_aln] 64bp reads: max_diff = 4
814s [bwa_aln] 93bp reads: max_diff = 5
814s [bwa_aln] 124bp reads: max_diff = 6
814s [bwa_aln] 157bp reads: max_diff = 7
814s [bwa_aln] 190bp reads: max_diff = 8
814s [bwa_aln] 225bp reads: max_diff = 9
815s [bwa_aln_core] calculate SA coordinate... 0.11 sec
815s [bwa_aln_core] write to the disk... 0.00 sec
815s [bwa_aln_core] 10000 sequences have been processed.
815s [main] Version: 0.7.17-r1188
815s [main] CMD: bwa aln genomes/vdv1dwv5.fasta ./SAM/vdv1dwv9.fastq
815s [main] Real time: 0.129 sec; CPU: 0.125 sec
815s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
815s [bwa_aln_core] refine gapped alignments... 0.00 sec
815s [bwa_aln_core] print alignments... 0.01 sec
815s [bwa_aln_core] 10000 sequences have been processed.
815s [main] Version: 0.7.17-r1188
815s [main] CMD: bwa samse genomes/vdv1dwv5.fasta /tmp/res.sai ./SAM/vdv1dwv9.fastq
815s [main] Real time: 0.044 sec; CPU: 0.037 sec
815s [bwa_aln] 17bp reads: max_diff = 2
815s [bwa_aln] 38bp reads: max_diff = 3
815s [bwa_aln] 64bp reads: max_diff = 4
815s [bwa_aln] 93bp reads: max_diff = 5
815s [bwa_aln] 124bp reads: max_diff = 6
815s [bwa_aln] 157bp reads: max_diff = 7
815s [bwa_aln] 190bp reads: max_diff = 8
815s [bwa_aln] 225bp reads: max_diff = 9
815s [bwa_aln_core] calculate SA coordinate... 0.12 sec
815s [bwa_aln_core] write to the disk... 0.00 sec
815s [bwa_aln_core] 10000 sequences have been processed.
815s [main] Version: 0.7.17-r1188
815s [main] CMD: bwa aln genomes/vdv1dwv9.fasta ./SAM/vdv1dwv9.fastq
815s [main] Real time: 0.137 sec; CPU: 0.133 sec
815s [bwa_aln_core] convert to sequence coordinate... 0.01 sec
815s [bwa_aln_core] refine gapped alignments... 0.01 sec
815s [bwa_aln_core] print alignments... 0.01 sec
815s [bwa_aln_core] 10000 sequences have been processed.
815s [main] Version: 0.7.17-r1188
815s [main] CMD: bwa samse genomes/vdv1dwv9.fasta /tmp/res.sai ./SAM/vdv1dwv9.fastq
815s [main] Real time: 0.052 sec; CPU: 0.045 sec
815s 
815s --- Simulating reads for each reference genome with mason_illumina
815s 
815s Original command with mason from SeQan 1 was
815s     mason illumina -N 10000 -hi 0 -hs 0 -n 72  -sq -o ./SAM/dwv.fastq genomes/dwv.fasta
815s Please verify that the following call of mason_simulator fits your needs.  If not
815s please use
815s     reportbug gasic
815s to propose enhancements.
815s 
815s Executing: /usr/lib/seqan/bin/mason_simulator --seq-technology illumina -n 10000 --illumina-read-length 72 -o ./SAM/dwv.fastq -ir genomes/dwv.fasta
815s Original command with mason from SeQan 1 was
815s     mason illumina -N 10000 -hi 0 -hs 0 -n 72  -sq -o ./SAM/vdv1.fastq genomes/vdv1.fasta
815s Please verify that the following call of mason_simulator fits your needs.  If not
815s please use
815s     reportbug gasic
815s to propose enhancements.
815s 
815s Executing: /usr/lib/seqan/bin/mason_simulator --seq-technology illumina -n 10000 --illumina-read-length 72 -o ./SAM/vdv1.fastq -ir genomes/vdv1.fasta
815s Original command with mason from SeQan 1 was
815s     mason illumina -N 10000 -hi 0 -hs 0 -n 72  -sq -o ./SAM/vdv1dwv5.fastq genomes/vdv1dwv5.fasta
815s Please verify that the following call of mason_simulator fits your needs.  If not
815s please use
815s     reportbug gasic
815s to propose enhancements.
815s 
815s Executing: /usr/lib/seqan/bin/mason_simulator --seq-technology illumina -n 10000 --illumina-read-length 72 -o ./SAM/vdv1dwv5.fastq -ir genomes/vdv1dwv5.fasta
815s Original command with mason from SeQan 1 was
815s     mason illumina -N 10000 -hi 0 -hs 0 -n 72  -sq -o ./SAM/vdv1dwv9.fastq genomes/vdv1dwv9.fasta
815s Please verify that the following call of mason_simulator fits your needs.  If not
815s please use
815s     reportbug gasic
815s to propose enhancements.
815s 
815s Executing: /usr/lib/seqan/bin/mason_simulator --seq-technology illumina -n 10000 --illumina-read-length 72 -o ./SAM/vdv1dwv9.fastq -ir genomes/vdv1dwv9.fasta
815s 
815s --- Mapping simulated reads to reference genomes with bwa
815s 
815s Executing: bwa aln  genomes/dwv.fasta ./SAM/dwv.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1.fasta ./SAM/dwv.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1dwv5.fasta ./SAM/dwv.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1dwv9.fasta ./SAM/dwv.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/dwv.fasta ./SAM/vdv1.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1.fasta ./SAM/vdv1.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1dwv5.fasta ./SAM/vdv1.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1dwv9.fasta ./SAM/vdv1.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/dwv.fasta ./SAM/vdv1dwv5.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1.fasta ./SAM/vdv1dwv5.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1dwv5.fasta ./SAM/vdv1dwv5.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1dwv9.fasta ./SAM/vdv1dwv5.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/dwv.fasta ./SAM/vdv1dwv9.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1.fasta ./SAM/vdv1dwv9.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1dwv5.fasta ./SAM/vdv1dwv9.fastq > /tmp/res.sai
815s Executing: bwa aln  genomes/vdv1dwv9.fasta ./SAM/vdv1dwv9.fastq > /tmp/res.sai
815s 
815s --- Parsing SAM files
815s 
815s 
                         
    SAM file 1 of 16
                         
    SAM file 2 of 16
                         
    SAM file 3 of 16
                         
    SAM file 4 of 16
                         
    SAM file 5 of 16
                         
    SAM file 6 of 16
                         
    SAM file 7 of 16
                         
    SAM file 8 of 16
                         
    SAM file 9 of 16
                          
    SAM file 10 of 16
                          
    SAM file 11 of 16
                          
    SAM file 12 of 16
                          
    SAM file 13 of 16
                          
    SAM file 14 of 16
                          
    SAM file 15 of 16
                          
    SAM file 16 of 16
815s 
815s Matrix creation done
815s 
815s Wrote similarity matrix to ./similarity_matrix.npy
815s Passed
815s 
815s Test 3: correct_abundances
816s 
816s --- GASiC correction
816s 
816s     found 100000 reads
816s 
816s --- Analyzing SAM files
816s 
816s 
                        
    SAM file 1 of 4
                        
    SAM file 2 of 4
                        
    SAM file 3 of 4
                        
    SAM file 4 of 4
816s 
816s --- Bootstrapping abundances
816s 
821s 
                               
    bootstrapping 1 of 100
                               
    bootstrapping 2 of 100
                               
    bootstrapping 3 of 100
                               
    bootstrapping 4 of 100
                               
    bootstrapping 5 of 100
                               
    bootstrapping 6 of 100
                               
    bootstrapping 7 of 100
                               
    bootstrapping 8 of 100
                               
    bootstrapping 9 of 100
                                
    bootstrapping 10 of 100
                                
    bootstrapping 11 of 100
                                
    bootstrapping 12 of 100
                                
    bootstrapping 13 of 100
                                
    bootstrapping 14 of 100
                                
    bootstrapping 15 of 100
                                
    bootstrapping 16 of 100
                                
    bootstrapping 17 of 100
                                
    bootstrapping 18 of 100
                                
    bootstrapping 19 of 100
                                
    bootstrapping 20 of 100
                                
    bootstrapping 21 of 100
                                
    bootstrapping 22 of 100
                                
    bootstrapping 23 of 100
                                
    bootstrapping 24 of 100
                                
    bootstrapping 25 of 100
                                
    bootstrapping 26 of 100
                                
    bootstrapping 27 of 100
                                
    bootstrapping 28 of 100
                                
    bootstrapping 29 of 100
                                
    bootstrapping 30 of 100
                                
    bootstrapping 31 of 100
                                
    bootstrapping 32 of 100
                                
    bootstrapping 33 of 100
                                
    bootstrapping 34 of 100
                                
    bootstrapping 35 of 100
                                
    bootstrapping 36 of 100
                                
    bootstrapping 37 of 100
                                
    bootstrapping 38 of 100
                                
    bootstrapping 39 of 100
                                
    bootstrapping 40 of 100
                                
    bootstrapping 41 of 100
                                
    bootstrapping 42 of 100
                                
    bootstrapping 43 of 100
                                
    bootstrapping 44 of 100
                                
    bootstrapping 45 of 100
                                
    bootstrapping 46 of 100
                                
    bootstrapping 47 of 100
                                
    bootstrapping 48 of 100
                                
    bootstrapping 49 of 100
                                
    bootstrapping 50 of 100
                                
    bootstrapping 51 of 100
                                
    bootstrapping 52 of 100
                                
    bootstrapping 53 of 100
                                
    bootstrapping 54 of 100
                                
    bootstrapping 55 of 100
                                
    bootstrapping 56 of 100
                                
    bootstrapping 57 of 100
                                
    bootstrapping 58 of 100
                                
    bootstrapping 59 of 100
                                
    bootstrapping 60 of 100
                                
    bootstrapping 61 of 100
                                
    bootstrapping 62 of 100
                                
    bootstrapping 63 of 100
                                
    bootstrapping 64 of 100
                                
    bootstrapping 65 of 100
                                
    bootstrapping 66 of 100
                                
    bootstrapping 67 of 100
                                
    bootstrapping 68 of 100
                                
    bootstrapping 69 of 100
                                
    bootstrapping 70 of 100
                                
    bootstrapping 71 of 100
                                
    bootstrapping 72 of 100
                                
    bootstrapping 73 of 100
                                
    bootstrapping 74 of 100
                                
    bootstrapping 75 of 100
                                
    bootstrapping 76 of 100
                                
    bootstrapping 77 of 100
                                
    bootstrapping 78 of 100
                                
    bootstrapping 79 of 100
                                
    bootstrapping 80 of 100
                                
    bootstrapping 81 of 100
                                
    bootstrapping 82 of 100
                                
    bootstrapping 83 of 100
                                
    bootstrapping 84 of 100
                                
    bootstrapping 85 of 100
                                
    bootstrapping 86 of 100
                                
    bootstrapping 87 of 100
                                
    bootstrapping 88 of 100
                                
    bootstrapping 89 of 100
                                
    bootstrapping 90 of 100
                                
    bootstrapping 91 of 100
                                
    bootstrapping 92 of 100
                                
    bootstrapping 93 of 100
                                
    bootstrapping 94 of 100
                                
    bootstrapping 95 of 100
                                
    bootstrapping 96 of 100
                                
    bootstrapping 97 of 100
                                
    bootstrapping 98 of 100
                                
    bootstrapping 99 of 100
                                 
    bootstrapping 100 of 100
821s 
821s Done estimating abundances
821s 
821s --- wrote results to results.txt
821s Passed
821s 
821s Test 4: quality_check
823s Passed
823s 
824s autopkgtest [17:02:03]: test run-unit-test: -----------------------]
824s autopkgtest [17:02:03]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
824s run-unit-test        PASS
824s autopkgtest [17:02:03]: @@@@@@@@@@@@@@@@@@@@ summary
824s run-unit-test        PASS