0s autopkgtest [01:25:47]: starting date and time: 2024-04-19 01:25:47+0000 0s autopkgtest [01:25:47]: git checkout: 43bc6cdf gitlab-ci: do not include the salsa pipeline 0s autopkgtest [01:25:47]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.km80gmjo/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:gsl --apt-upgrade art-nextgen-simulation-tools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=gsl/2.7.1+dfsg-6ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-arm64-23.secgroup --name adt-noble-arm64-art-nextgen-simulation-tools-20240419-012546-juju-7f2275-prod-proposed-migration-environment-2-62cbee7e-c702-466d-a663-1f0d4667dcab --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 354s autopkgtest [01:31:41]: testbed dpkg architecture: arm64 354s autopkgtest [01:31:41]: testbed apt version: 2.7.14build2 354s autopkgtest [01:31:41]: @@@@@@@@@@@@@@@@@@@@ test bed setup 356s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 357s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [2340 B] 357s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [12.2 kB] 357s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [53.4 kB] 357s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [338 kB] 358s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [129 kB] 358s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B] 358s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [92.9 kB] 358s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B] 358s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [464 kB] 358s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B] 358s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B] 368s Fetched 1221 kB in 3s (454 kB/s) 368s Reading package lists... 371s sh: 4: dhclient: not found 374s Reading package lists... 375s Building dependency tree... 375s Reading state information... 377s Calculating upgrade... 379s The following packages will be upgraded: 379s apport apport-core-dump-handler libkeyutils1 libnetplan1 libnuma1 libunwind8 379s make man-db netcat-openbsd netplan-generator netplan.io numactl 379s python3-apport python3-netplan python3-problem-report 379s 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 379s Need to get 2062 kB of archives. 379s After this operation, 1024 B of additional disk space will be used. 379s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 python3-problem-report all 2.28.1-0ubuntu1 [23.8 kB] 379s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 python3-apport all 2.28.1-0ubuntu1 [92.1 kB] 380s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 apport-core-dump-handler all 2.28.1-0ubuntu1 [16.8 kB] 380s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 apport all 2.28.1-0ubuntu1 [83.5 kB] 380s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libkeyutils1 arm64 1.6.3-3build1 [9654 B] 380s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 netplan-generator arm64 1.0-2ubuntu1 [58.9 kB] 380s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 python3-netplan arm64 1.0-2ubuntu1 [21.5 kB] 380s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 netplan.io arm64 1.0-2ubuntu1 [65.8 kB] 380s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libnetplan1 arm64 1.0-2ubuntu1 [119 kB] 380s Get:10 http://ftpmaster.internal/ubuntu noble/main arm64 netcat-openbsd arm64 1.226-1ubuntu2 [43.8 kB] 380s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 libnuma1 arm64 2.0.18-1build1 [23.6 kB] 380s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 man-db arm64 2.12.0-4build2 [1232 kB] 380s Get:13 http://ftpmaster.internal/ubuntu noble/main arm64 libunwind8 arm64 1.6.2-3build1 [53.5 kB] 380s Get:14 http://ftpmaster.internal/ubuntu noble/main arm64 make arm64 4.3-4.1build2 [178 kB] 380s Get:15 http://ftpmaster.internal/ubuntu noble/main arm64 numactl arm64 2.0.18-1build1 [39.5 kB] 381s Preconfiguring packages ... 382s Fetched 2062 kB in 1s (2308 kB/s) 383s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 77740 files and directories currently installed.) 383s Preparing to unpack .../00-python3-problem-report_2.28.1-0ubuntu1_all.deb ... 383s Unpacking python3-problem-report (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ... 383s Preparing to unpack .../01-python3-apport_2.28.1-0ubuntu1_all.deb ... 384s Unpacking python3-apport (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ... 384s Preparing to unpack .../02-apport-core-dump-handler_2.28.1-0ubuntu1_all.deb ... 384s Unpacking apport-core-dump-handler (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ... 384s Preparing to unpack .../03-apport_2.28.1-0ubuntu1_all.deb ... 384s Unpacking apport (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ... 385s Preparing to unpack .../04-libkeyutils1_1.6.3-3build1_arm64.deb ... 385s Unpacking libkeyutils1:arm64 (1.6.3-3build1) over (1.6.3-3) ... 385s Preparing to unpack .../05-netplan-generator_1.0-2ubuntu1_arm64.deb ... 385s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 385s Unpacking netplan-generator (1.0-2ubuntu1) over (1.0-2build1) ... 385s Preparing to unpack .../06-python3-netplan_1.0-2ubuntu1_arm64.deb ... 385s Unpacking python3-netplan (1.0-2ubuntu1) over (1.0-2build1) ... 385s Preparing to unpack .../07-netplan.io_1.0-2ubuntu1_arm64.deb ... 385s Unpacking netplan.io (1.0-2ubuntu1) over (1.0-2build1) ... 385s Preparing to unpack .../08-libnetplan1_1.0-2ubuntu1_arm64.deb ... 385s Unpacking libnetplan1:arm64 (1.0-2ubuntu1) over (1.0-2build1) ... 386s Preparing to unpack .../09-netcat-openbsd_1.226-1ubuntu2_arm64.deb ... 386s Unpacking netcat-openbsd (1.226-1ubuntu2) over (1.226-1ubuntu1) ... 386s Preparing to unpack .../10-libnuma1_2.0.18-1build1_arm64.deb ... 386s Unpacking libnuma1:arm64 (2.0.18-1build1) over (2.0.18-1) ... 386s Preparing to unpack .../11-man-db_2.12.0-4build2_arm64.deb ... 386s Unpacking man-db (2.12.0-4build2) over (2.12.0-4build1) ... 387s Preparing to unpack .../12-libunwind8_1.6.2-3build1_arm64.deb ... 387s Unpacking libunwind8:arm64 (1.6.2-3build1) over (1.6.2-3) ... 387s Preparing to unpack .../13-make_4.3-4.1build2_arm64.deb ... 387s Unpacking make (4.3-4.1build2) over (4.3-4.1build1) ... 387s Preparing to unpack .../14-numactl_2.0.18-1build1_arm64.deb ... 387s Unpacking numactl (2.0.18-1build1) over (2.0.18-1) ... 387s Setting up libkeyutils1:arm64 (1.6.3-3build1) ... 387s Setting up python3-problem-report (2.28.1-0ubuntu1) ... 388s Setting up netcat-openbsd (1.226-1ubuntu2) ... 388s Setting up libnetplan1:arm64 (1.0-2ubuntu1) ... 388s Setting up man-db (2.12.0-4build2) ... 389s Updating database of manual pages ... 399s man-db.service is a disabled or a static unit not running, not starting it. 399s Setting up libunwind8:arm64 (1.6.2-3build1) ... 399s Setting up python3-apport (2.28.1-0ubuntu1) ... 400s Setting up make (4.3-4.1build2) ... 400s Setting up libnuma1:arm64 (2.0.18-1build1) ... 400s Setting up python3-netplan (1.0-2ubuntu1) ... 400s Setting up netplan-generator (1.0-2ubuntu1) ... 400s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 400s Setting up numactl (2.0.18-1build1) ... 400s Setting up netplan.io (1.0-2ubuntu1) ... 400s Setting up apport-core-dump-handler (2.28.1-0ubuntu1) ... 409s Setting up apport (2.28.1-0ubuntu1) ... 409s Installing new version of config file /etc/apport/crashdb.conf ... 412s apport-autoreport.service is a disabled or a static unit not running, not starting it. 413s Processing triggers for dbus (1.14.10-4ubuntu4) ... 413s Processing triggers for libc-bin (2.39-0ubuntu8) ... 413s Reading package lists... 414s Building dependency tree... 414s Reading state information... 416s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 417s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 417s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 417s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 417s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 424s Reading package lists... 424s Reading package lists... 425s Building dependency tree... 425s Reading state information... 427s Calculating upgrade... 429s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 429s Reading package lists... 430s Building dependency tree... 430s Reading state information... 432s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 432s autopkgtest [01:32:59]: rebooting testbed after setup commands that affected boot 599s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 605s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 615s autopkgtest [01:36:02]: testbed running kernel: Linux 6.8.0-22-generic #22-Ubuntu SMP PREEMPT_DYNAMIC Fri Apr 5 02:52:09 UTC 2024 620s autopkgtest [01:36:07]: @@@@@@@@@@@@@@@@@@@@ apt-source art-nextgen-simulation-tools 626s Get:1 http://ftpmaster.internal/ubuntu noble/universe art-nextgen-simulation-tools 20160605+dfsg-5 (dsc) [2400 B] 626s Get:2 http://ftpmaster.internal/ubuntu noble/universe art-nextgen-simulation-tools 20160605+dfsg-5 (tar) [2229 kB] 626s Get:3 http://ftpmaster.internal/ubuntu noble/universe art-nextgen-simulation-tools 20160605+dfsg-5 (diff) [9420 B] 627s gpgv: Signature made Mon Dec 18 18:32:54 2023 UTC 627s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 627s gpgv: issuer "tille@debian.org" 627s gpgv: Can't check signature: No public key 627s dpkg-source: warning: cannot verify inline signature for ./art-nextgen-simulation-tools_20160605+dfsg-5.dsc: no acceptable signature found 628s autopkgtest [01:36:15]: testing package art-nextgen-simulation-tools version 20160605+dfsg-5 628s autopkgtest [01:36:15]: build not needed 637s autopkgtest [01:36:24]: test run-unit-test: preparing testbed 640s Reading package lists... 641s Building dependency tree... 641s Reading state information... 643s Starting pkgProblemResolver with broken count: 0 643s Starting 2 pkgProblemResolver with broken count: 0 643s Done 646s The following additional packages will be installed: 646s art-nextgen-simulation-tools art-nextgen-simulation-tools-profiles libgsl27 646s libgslcblas0 646s Suggested packages: 646s gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html 646s The following NEW packages will be installed: 646s art-nextgen-simulation-tools art-nextgen-simulation-tools-profiles 646s autopkgtest-satdep libgsl27 libgslcblas0 646s 0 upgraded, 5 newly installed, 0 to remove and 0 not upgraded. 646s Need to get 4710 kB/4711 kB of archives. 646s After this operation, 18.9 MB of additional disk space will be used. 646s Get:1 /tmp/autopkgtest.Ce8MW2/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [728 B] 646s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libgslcblas0 arm64 2.7.1+dfsg-6ubuntu2 [72.8 kB] 647s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libgsl27 arm64 2.7.1+dfsg-6ubuntu2 [918 kB] 647s Get:4 http://ftpmaster.internal/ubuntu noble/universe arm64 art-nextgen-simulation-tools arm64 20160605+dfsg-5 [1763 kB] 648s Get:5 http://ftpmaster.internal/ubuntu noble/universe arm64 art-nextgen-simulation-tools-profiles all 20160605+dfsg-5 [1956 kB] 651s Fetched 4710 kB in 2s (1963 kB/s) 651s Selecting previously unselected package libgslcblas0:arm64. 651s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 77739 files and directories currently installed.) 651s Preparing to unpack .../libgslcblas0_2.7.1+dfsg-6ubuntu2_arm64.deb ... 651s Unpacking libgslcblas0:arm64 (2.7.1+dfsg-6ubuntu2) ... 652s Selecting previously unselected package libgsl27:arm64. 652s Preparing to unpack .../libgsl27_2.7.1+dfsg-6ubuntu2_arm64.deb ... 652s Unpacking libgsl27:arm64 (2.7.1+dfsg-6ubuntu2) ... 652s Selecting previously unselected package art-nextgen-simulation-tools. 652s Preparing to unpack .../art-nextgen-simulation-tools_20160605+dfsg-5_arm64.deb ... 652s Unpacking art-nextgen-simulation-tools (20160605+dfsg-5) ... 653s Selecting previously unselected package art-nextgen-simulation-tools-profiles. 653s Preparing to unpack .../art-nextgen-simulation-tools-profiles_20160605+dfsg-5_all.deb ... 653s Unpacking art-nextgen-simulation-tools-profiles (20160605+dfsg-5) ... 653s Selecting previously unselected package autopkgtest-satdep. 653s Preparing to unpack .../1-autopkgtest-satdep.deb ... 653s Unpacking autopkgtest-satdep (0) ... 653s Setting up libgslcblas0:arm64 (2.7.1+dfsg-6ubuntu2) ... 653s Setting up libgsl27:arm64 (2.7.1+dfsg-6ubuntu2) ... 653s Setting up art-nextgen-simulation-tools (20160605+dfsg-5) ... 653s Setting up art-nextgen-simulation-tools-profiles (20160605+dfsg-5) ... 653s Setting up autopkgtest-satdep (0) ... 653s Processing triggers for man-db (2.12.0-4build2) ... 655s Processing triggers for libc-bin (2.39-0ubuntu8) ... 668s (Reading database ... 77859 files and directories currently installed.) 668s Removing autopkgtest-satdep (0) ... 669s autopkgtest [01:36:56]: test run-unit-test: [----------------------- 669s =================================================================== 669s ART_454 (Version 2.6.0) 669s Simulation of 454 Pyrosequencing 669s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 669s =================================================================== 669s 670s Single-end simulation 670s 670s Total CPU time used: 0.215127 670s 670s The random seed for the run: 1713490616 670s 670s Parameters Settings 670s number of flow cycles: 100 670s fold of read coverage: 10X 670s 670s 454 Profile for Simulation 670s the built-in GS-FLX profile 670s 670s Output Files 670s 670s FASTQ Sequence File: 670s ./single_454_flx.fq 670s 670s ALN Alignment File: 670s ./single_454_flx.aln 670s 670s SAM Alignment File: 670s ./single_454_flx.sam 670s 670s Read Coverage File: 670s ./single_454_flx.stat 670s 670s =================================================================== 670s ART_454 (Version 2.6.0) 670s Simulation of 454 Pyrosequencing 670s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 670s =================================================================== 670s 670s Paired-end simulation 670s 670s Total CPU time used: 0.156539 670s 670s The random seed for the run: 1713490617 670s 670s Parameters Settings 670s number of flow cycles: 100 670s fold of read coverage: 5X 670s fragment length 670s mean: 500 670s std: 20 670s 670s 454 Profile for Simulation 670s the built-in GS-FLX profile 670s 670s Output Files 670s 670s FASTQ Sequence Files: 670s the 1st reads: ./paired_454_flx1.fq 670s the 2nd reads: ./paired_454_flx2.fq 670s 670s ALN Alignment Files: 670s the 1st reads: ./paired_454_flx1.aln 670s the 2nd reads: ./paired_454_flx2.aln 670s 670s SAM Alignment File: 670s ./paired_454_flx.sam 670s 670s Read Coverage File: 670s ./paired_454_flx.stat 670s 670s =================================================================== 670s ART_454 (Version 2.6.0) 670s Simulation of 454 Pyrosequencing 670s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 670s =================================================================== 670s 670s Paired-end simulation 670s 670s Total CPU time used: 0.173265 670s 670s The random seed for the run: 1713490617 670s 670s Parameters Settings 670s number of flow cycles: 200 670s fold of read coverage: 6X 670s fragment length 670s mean: 500 670s std: 20 670s 670s 454 Profile for Simulation 670s the built-in GS-FLX Titanium profile 670s 670s Output Files 670s 670s FASTQ Sequence Files: 670s the 1st reads: ./paired_454_flxTitan1.fq 670s the 2nd reads: ./paired_454_flxTitan2.fq 670s 670s ALN Alignment Files: 670s the 1st reads: ./paired_454_flxTitan1.aln 670s the 2nd reads: ./paired_454_flxTitan2.aln 670s 670s SAM Alignment File: 670s ./paired_454_flxTitan.sam 670s 670s Read Coverage File: 670s ./paired_454_flxTitan.stat 670s 670s =================================================================== 670s ART_454 (Version 2.6.0) 670s Simulation of 454 Pyrosequencing 670s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 670s =================================================================== 670s 707s Amplicon 5'-end sequencing with single-end reads 707s 707s Total CPU time used: 36.3591 707s 707s The random seed for the run: 1713490617 707s 707s Parameters Settings 707s number of flow cycles: 100 707s # reads per amplion: 10 707s 707s 454 Profile for Simulation 707s the built-in GS-FLX profile 707s 707s Output Files 707s 707s FASTQ Sequence File: 707s ./amp_single_454.fq 707s 707s ALN Alignment File: 707s ./amp_single_454.aln 707s 707s SAM Alignment File: 707s ./amp_single_454.sam 707s 707s Read Coverage File: 707s ./amp_single_454.stat 707s 707s =================================================================== 707s ART_454 (Version 2.6.0) 707s Simulation of 454 Pyrosequencing 707s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 707s =================================================================== 707s 739s Amplicon two-end sequencing with paired-end reads 739s 739s Total CPU time used: 30.9388 739s 739s The random seed for the run: 1713490654 739s 739s Parameters Settings 739s number of flow cycles: 100 739s # read pairs per amplion: 5 739s 739s 454 Profile for Simulation 739s the built-in GS-FLX profile 739s 739s Output Files 739s 739s FASTQ Sequence Files: 739s the 1st reads: ./amp_paired_454.fq 739s the 2nd reads: ./amp_paired_4542.fq 739s 739s ALN Alignment Files: 739s the 1st reads: ./amp_paired_454.aln 739s the 2nd reads: ./amp_paired_4542.aln 739s 739s SAM Alignment File: 739s ./amp_paired_454.sam 739s 739s Read Coverage File: 739s ./amp_paired_454.stat 739s 739s =================================================================== 739s ART_454 (Version 2.6.0) 739s Simulation of 454 Pyrosequencing 739s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 739s =================================================================== 739s 739s Single-end simulation 739s 739s Total CPU time used: 0.191691 739s 739s The random seed for the run: 777 739s 739s Parameters Settings 739s number of flow cycles: 100 739s fold of read coverage: 10X 739s 739s 454 Profile for Simulation 739s the built-in GS-FLX profile 739s 739s Output Files 739s 739s FASTQ Sequence File: 739s ./single_454_t1.fq 739s 739s ALN Alignment File: 739s ./single_454_t1.aln 739s 739s SAM Alignment File: 739s ./single_454_t1.sam 739s 739s Read Coverage File: 739s ./single_454_t1.stat 739s 739s =================================================================== 739s ART_454 (Version 2.6.0) 739s Simulation of 454 Pyrosequencing 739s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 739s =================================================================== 739s 739s Single-end simulation 739s 739s Total CPU time used: 0.193427 739s 739s The random seed for the run: 777 739s 739s Parameters Settings 739s number of flow cycles: 100 739s fold of read coverage: 10X 739s 739s 454 Profile for Simulation 739s the built-in GS-FLX profile 739s 739s Output Files 739s 739s FASTQ Sequence File: 739s ./single_454_t2.fq 739s 739s ALN Alignment File: 739s ./single_454_t2.aln 739s 739s SAM Alignment File: 739s ./single_454_t2.sam 739s 739s Read Coverage File: 739s ./single_454_t2.stat 739s 739s compare difference of two simulation datasets after normalising known difference 739s ================================================================= 739s ART_SOLiD (Version 1.3.3) 739s Simulation of Applied Biosystems' SOLiD Sequencing 739s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 739s ================================================================= 739s 740s Single-end simulation 740s 740s Total CPU time used: 0.39097 740s 740s The random seed for the run: 1713490686 740s 740s Parameters Settings 740s fold of read coverage: 10X 740s read length: 25 740s 740s SOLiD Error Profile for Simulation 740s the built-in 35bp error profile 740s 740s Output Files 740s 740s FASTQ Sequence File: 740s ./single_dat.fq 740s 740s MAP Alignment File: 740s ./single_dat.map 740s 740s SAM Alignment File: 740s ./single_dat.sam 740s 740s convert a map file to a UCSC BED file 740s /usr/bin/map2bed.pl single_dat.bed single_dat.map 740s run_test_examples_SOLiD.sh: 12: /usr/bin/map2bed.pl: not found 740s ================================================================= 740s ART_SOLiD (Version 1.3.3) 740s Simulation of Applied Biosystems' SOLiD Sequencing 740s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 740s ================================================================= 740s 740s can not open error profile file: ../SOLiD_profiles/profile_pseudo 740s ================================================================= 740s ART_SOLiD (Version 1.3.3) 740s Simulation of Applied Biosystems' SOLiD Sequencing 740s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 740s ================================================================= 740s 740s Mate-Pair (F3-R3) simulation 740s 740s Total CPU time used: 0.625314 740s 740s The random seed for the run: 1713490687 740s 740s Parameters Settings 740s fold of read coverage: 20X 740s F3 read length: 35 740s R3 read length: 35 740s fragment length 740s mean: 2000 740s std: 50 740s 740s SOLiD Error Profile for Simulation 740s the built-in 35bp error profile 740s 740s Output Files 740s 740s FASTQ Sequence Files: 740s the 1st reads: ./matepair_dat_R3.fq 740s the 2nd reads: ./matepair_dat_F3.fq 740s 740s MAP Alignment Files: 740s the 1st reads: ./matepair_dat_R3.map 740s the 2nd reads: ./matepair_dat_F3.map 740s 740s SAM Alignment File: 740s ./matepair_dat.sam 740s 740s convert two map files to a UCSC BED file 740s /usr/bin/map2bed.pl maptepair.bed matepair_dat1.map matepair_dat2.map 740s run_test_examples_SOLiD.sh: 20: /usr/bin/map2bed.pl: not found 740s ================================================================= 740s ART_SOLiD (Version 1.3.3) 740s Simulation of Applied Biosystems' SOLiD Sequencing 740s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 740s ================================================================= 740s 740s Warning: you are using the 75bp error profile for testing only. 740s 741s Mate-Pair (F3-R3) simulation 741s 741s Total CPU time used: 0.267789 741s 741s The random seed for the run: 777 741s 741s Parameters Settings 741s fold of read coverage: 10X 741s F3 read length: 50 741s R3 read length: 50 741s fragment length 741s mean: 1500 741s std: 50 741s 741s SOLiD Error Profile for Simulation 741s the 75bp error profile for testing only 741s 741s Output Files 741s 741s FASTQ Sequence Files: 741s the 1st reads: ./matepair_fs1_R3.fq 741s the 2nd reads: ./matepair_fs1_F3.fq 741s 741s MAP Alignment Files: 741s the 1st reads: ./matepair_fs1_R3.map 741s the 2nd reads: ./matepair_fs1_F3.map 741s 741s SAM Alignment File: 741s ./matepair_fs1.sam 741s 741s ================================================================= 741s ART_SOLiD (Version 1.3.3) 741s Simulation of Applied Biosystems' SOLiD Sequencing 741s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 741s ================================================================= 741s 741s Warning: you are using the 75bp error profile for testing only. 741s 741s Mate-Pair (F3-R3) simulation 741s 741s Total CPU time used: 0.268329 741s 741s The random seed for the run: 777 741s 741s Parameters Settings 741s fold of read coverage: 10X 741s F3 read length: 50 741s R3 read length: 50 741s fragment length 741s mean: 1500 741s std: 50 741s 741s SOLiD Error Profile for Simulation 741s the 75bp error profile for testing only 741s 741s Output Files 741s 741s FASTQ Sequence Files: 741s the 1st reads: ./matepair_fs2_R3.fq 741s the 2nd reads: ./matepair_fs2_F3.fq 741s 741s MAP Alignment Files: 741s the 1st reads: ./matepair_fs2_R3.map 741s the 2nd reads: ./matepair_fs2_F3.map 741s 741s SAM Alignment File: 741s ./matepair_fs2.sam 741s 741s compare two simulation datasets 741s 4c4 741s < @PG ID:03 PN:ART_SOLiD CL:/usr/bin/art_SOLiD -r 777 -s testSeq.fa ./matepair_fs1 50 10 1500 50 741s --- 741s > @PG ID:03 PN:ART_SOLiD CL:/usr/bin/art_SOLiD -r 777 -s testSeq.fa ./matepair_fs2 50 10 1500 50 741s ================================================================= 741s ART_SOLiD (Version 1.3.3) 741s Simulation of Applied Biosystems' SOLiD Sequencing 741s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 741s ================================================================= 741s 741s Warning: you are using the 75bp error profile for testing only. 741s 742s Paired-end (F3-F5) simulation 742s 742s Total CPU time used: 0.947918 742s 742s The random seed for the run: 1713490688 742s 742s Parameters Settings 742s fold of read coverage: 50X 742s F3 read length: 75 742s F5 read length: 35 742s fragment length 742s mean: 250 742s std: 10 742s 742s SOLiD Error Profile for Simulation 742s the 75bp error profile for testing only 742s 742s Output Files 742s 742s FASTQ Sequence Files: 742s the 1st reads: ./paired_dat_F5.fq 742s the 2nd reads: ./paired_dat_F3.fq 742s 742s MAP Alignment Files: 742s the 1st reads: ./paired_dat_F5.map 742s the 2nd reads: ./paired_dat_F3.map 742s 742s SAM Alignment File: 742s ./paired_dat.sam 742s 742s ================================================================= 742s ART_SOLiD (Version 1.3.3) 742s Simulation of Applied Biosystems' SOLiD Sequencing 742s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 742s ================================================================= 742s 1559s Amplicon single-end sequencing simulation 1559s 1559s Total CPU time used: 809.751 1559s 1559s The random seed for the run: 1713490689 1559s 1559s Parameters Settings 1559s # reads per amplion: 100 1559s read length: 25 1559s 1559s SOLiD Error Profile for Simulation 1559s the built-in 35bp error profile 1559s 1559s Output Files 1559s 1559s FASTQ Sequence File: 1559s ./amp_single.fq 1559s 1559s MAP Alignment File: 1559s ./amp_single.map 1559s 1559s SAM Alignment File: 1559s ./amp_single.sam 1559s 1559s ================================================================= 1559s ART_SOLiD (Version 1.3.3) 1559s Warning: you are using the 75bp error profile for testing only. Simulation of Applied Biosystems' SOLiD Sequencing 1559s 1559s 1559s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 1559s ================================================================= 1559s 1986s Amplicon matepair sequencing simulation 1986s 1986s Total CPU time used: 423.089 1986s 1986s The random seed for the run: 1713491506 1986s 1986s Parameters Settings 1986s # read pairs per amplion: 80 1986s F3 read length: 50 1986s R3 read length: 50 1986s 1986s SOLiD Error Profile for Simulation 1986s the 75bp error profile for testing only 1986s 1986s Output Files 1986s 1986s FASTQ Sequence Files: 1986s the 1st reads: ./amp_matepair_R3.fq 1986s the 2nd reads: ./amp_matepair_F3.fq 1986s 1986s MAP Alignment Files: 1986s the 1st reads: ./amp_matepair_R3.map 1986s the 2nd reads: ./amp_matepair_F3.map 1986s 1986s SAM Alignment File: 1986s ./amp_matepair.sam 1986s 1986s ================================================================= 1986s ART_SOLiD (Version 1.3.3) 1986s Simulation of Applied Biosystems' SOLiD Sequencing 1986s Copyright (c) 2008-2015, Weichun Huang. All Rights Reserved. 1986s ================================================================= 1986s 2298s Amplicon paired-end sequencing simulation 2298s 2298s Total CPU time used: 308.719 2298s 2298s The random seed for the run: 1713491933 2298s 2298s Parameters Settings 2298s # read pairs per amplion: 50 2298s F3 read length: 35 2298s F5 read length: 25 2298s 2298s SOLiD Error Profile for Simulation 2298s the built-in 35bp error profile 2298s 2298s Output Files 2298s 2298s FASTQ Sequence Files: 2298s the 1st reads: ./amp_paired_F5.fq 2298s the 2nd reads: ./amp_paired_F3.fq 2298s 2298s MAP Alignment Files: 2298s the 1st reads: ./amp_paired_F5.map 2298s the 2nd reads: ./amp_paired_F3.map 2298s 2298s SAM Alignment File: 2298s ./amp_paired.sam 2298s 2298s 2298s ====================ART==================== 2298s ART_Illumina (2008-2016) 2298s Q Version 2.5.8 (June 6, 2016) 2298s Contact: Weichun Huang 2298s ------------------------------------------- 2298s 2298s Single-end Simulation 2298s 2298s Total CPU time used: 0.236066 2298s 2298s The random seed for the run: 1713492245 2298s 2298s Parameters used during run 2298s Read Length: 35 2298s Genome masking 'N' cutoff frequency: 1 in 35 2298s Fold Coverage: 10X 2298s Profile Type: Combined 2298s ID Tag: 2298s 2298s Quality Profile(s) 2298s First Read: Genome Analyzer I Length 36 R1 (built-in profile) 2298s 2298s Output files 2298s 2298s FASTQ Sequence File: 2298s ./single_end_com.fq 2298s 2298s ALN Alignment File: 2298s ./single_end_com.aln 2298s 2298s SAM Alignment File: 2298s ./single_end_com.sam 2298s 2298s 2298s ====================ART==================== 2298s ART_Illumina (2008-2016) 2298s Q Version 2.5.8 (June 6, 2016) 2298s Contact: Weichun Huang 2298s ------------------------------------------- 2298s 2299s Single-end Simulation 2299s 2299s Total CPU time used: 0.219618 2299s 2299s The random seed for the run: 1713492245 2299s 2299s Parameters used during run 2299s Read Length: 50 2299s Genome masking 'N' cutoff frequency: 1 in 50 2299s Fold Coverage: 10X 2299s Profile Type: Separated 2299s ID Tag: 2299s 2299s Quality Profile(s) 2299s First Read: MiniSeq TruSeq Length 51 R1 (built-in profile) 2299s 2299s Output files 2299s 2299s FASTQ Sequence File: 2299s ./single_end_sep.fq 2299s 2299s ALN Alignment File: 2299s ./single_end_sep.aln 2299s 2299s SAM Alignment File: 2299s ./single_end_sep.sam 2299s 2299s 2299s ====================ART==================== 2299s ART_Illumina (2008-2016) 2299s Q Version 2.5.8 (June 6, 2016) 2299s Contact: Weichun Huang 2299s ------------------------------------------- 2299s 2299s Paired-end sequencing simulation 2299s 2299s Total CPU time used: 0.112388 2299s 2299s The random seed for the run: 1713492246 2299s 2299s Parameters used during run 2299s Read Length: 150 2299s Genome masking 'N' cutoff frequency: 1 in 150 2299s Fold Coverage: 10X 2299s Mean Fragment Length: 500 2299s Standard Deviation: 10 2299s Profile Type: Combined 2299s ID Tag: 2299s 2299s Quality Profile(s) 2299s First Read: HiSeq 2500 Length 150 R1 (built-in profile) 2299s First Read: HiSeq 2500 Length 150 R2 (built-in profile) 2299s 2299s Output files 2299s 2299s FASTQ Sequence Files: 2299s the 1st reads: ./paired_end_com1.fq 2299s the 2nd reads: ./paired_end_com2.fq 2299s 2299s ALN Alignment Files: 2299s the 1st reads: ./paired_end_com1.aln 2299s the 2nd reads: ./paired_end_com2.aln 2299s 2299s SAM Alignment File: 2299s ./paired_end_com.sam 2299s 2299s 2299s ====================ART==================== 2299s ART_Illumina (2008-2016) 2299s Q Version 2.5.8 (June 6, 2016) 2299s Contact: Weichun Huang 2299s ------------------------------------------- 2299s 2299s Paired-end sequencing simulation 2299s 2299s Total CPU time used: 0.180633 2299s 2299s The random seed for the run: 1713492246 2299s 2299s Parameters used during run 2299s Read Length: 100 2299s Genome masking 'N' cutoff frequency: 1 in 100 2299s Fold Coverage: 10X 2299s Mean Fragment Length: 500 2299s Standard Deviation: 10 2299s Profile Type: Separated 2299s ID Tag: 2299s 2299s Quality Profile(s) 2299s First Read: HiSeq 2000 Length 100 R1 (built-in profile) 2299s First Read: HiSeq 2000 Length 100 R2 (built-in profile) 2299s 2299s Output files 2299s 2299s FASTQ Sequence Files: 2299s the 1st reads: ./paired_end_sep1.fq 2299s the 2nd reads: ./paired_end_sep2.fq 2299s 2299s ALN Alignment Files: 2299s the 1st reads: ./paired_end_sep1.aln 2299s the 2nd reads: ./paired_end_sep2.aln 2299s 2299s SAM Alignment File: 2299s ./paired_end_sep.sam 2299s 2299s 2299s ====================ART==================== 2299s ART_Illumina (2008-2016) 2299s Q Version 2.5.8 (June 6, 2016) 2299s Contact: Weichun Huang 2299s ------------------------------------------- 2299s 2299s Matepair-end sequencing simulation 2299s 2299s Total CPU time used: 0.134693 2299s 2299s The random seed for the run: 1713492246 2299s 2299s Parameters used during run 2299s Read Length: 100 2299s Genome masking 'N' cutoff frequency: 1 in 100 2299s Fold Coverage: 10X 2299s Mean Fragment Length: 2500 2299s Standard Deviation: 50 2299s Profile Type: Combined 2299s ID Tag: 2299s 2299s Quality Profile(s) 2299s First Read: HiSeq 2500 Length 126 R1 (built-in profile) 2299s First Read: HiSeq 2500 Length 126 R2 (built-in profile) 2299s 2299s Output files 2299s 2299s FASTQ Sequence Files: 2299s the 1st reads: ./matepair_com1.fq 2299s the 2nd reads: ./matepair_com2.fq 2299s 2299s ALN Alignment Files: 2299s the 1st reads: ./matepair_com1.aln 2299s the 2nd reads: ./matepair_com2.aln 2299s 2299s SAM Alignment File: 2299s ./matepair_com.sam 2299s 2299s 2299s ====================ART==================== 2299s ART_Illumina (2008-2016) 2299s Q Version 2.5.8 (June 6, 2016) 2299s Contact: Weichun Huang 2299s ------------------------------------------- 2299s 2300s Amplicon 5'-end sequencing simulation 2300s 2300s Total CPU time used: 1.18574 2300s 2300s The random seed for the run: 1713492246 2300s 2300s Parameters used during run 2300s Read Length: 100 2300s Genome masking 'N' cutoff frequency: 1 in 100 2300s # Reads per Amplion: 2 2300s Profile Type: Combined 2300s ID Tag: 2300s 2300s Quality Profile(s) 2300s First Read: HiSeqX v2.5 TruSeq Length 151 R1 (built-in profile) 2300s 2300s Output files 2300s 2300s FASTQ Sequence File: 2300s ./amp_5_end_com.fq 2300s 2300s ALN Alignment File: 2300s ./amp_5_end_com.aln 2300s 2300s SAM Alignment File: 2300s ./amp_5_end_com.sam 2300s 2301s 2301s ====================ART==================== 2301s ART_Illumina (2008-2016) 2301s Q Version 2.5.8 (June 6, 2016) 2301s Contact: Weichun Huang 2301s ------------------------------------------- 2301s 2302s Amplicon paired-end sequencing simulation 2302s 2302s Total CPU time used: 1.49546 2302s 2302s The random seed for the run: 1713492247 2302s 2302s Parameters used during run 2302s Read Length: 100 2302s Genome masking 'N' cutoff frequency: 1 in 100 2302s # Read Pairs per Amplion: 1 2302s Profile Type: Combined 2302s ID Tag: 2302s 2302s Quality Profile(s) 2302s First Read: MiSeq v1 Length 250 R1 (built-in profile) 2302s First Read: MiSeq v1 Length 250 R2 (built-in profile) 2302s 2302s Output files 2302s 2302s FASTQ Sequence Files: 2302s the 1st reads: ./amp_pair1.fq 2302s the 2nd reads: ./amp_pair2.fq 2302s 2302s ALN Alignment Files: 2302s the 1st reads: ./amp_pair1.aln 2302s the 2nd reads: ./amp_pair2.aln 2302s 2302s SAM Alignment File: 2302s ./amp_pair.sam 2302s 2302s 2302s ====================ART==================== 2302s ART_Illumina (2008-2016) 2302s Q Version 2.5.8 (June 6, 2016) 2302s Contact: Weichun Huang 2302s ------------------------------------------- 2302s 2304s Amplicon matepair sequencing simulation 2304s 2304s Total CPU time used: 1.77486 2304s 2304s The random seed for the run: 1713492249 2304s 2304s Parameters used during run 2304s Read Length: 100 2304s Genome masking 'N' cutoff frequency: 1 in 100 2304s # Read Pairs per Amplion: 1 2304s Profile Type: Combined 2304s ID Tag: 2304s 2304s Quality Profile(s) 2304s First Read: MiSeq v3 Length 251 R1 (built-in profile) 2304s First Read: MiSeq v3 Length 251 R2 (built-in profile) 2304s 2304s Output files 2304s 2304s FASTQ Sequence Files: 2304s the 1st reads: ./amp_matepair1.fq 2304s the 2nd reads: ./amp_matepair2.fq 2304s 2304s ALN Alignment Files: 2304s the 1st reads: ./amp_matepair1.aln 2304s the 2nd reads: ./amp_matepair2.aln 2304s 2304s SAM Alignment File: 2304s ./amp_matepair.sam 2304s 2304s 2304s ====================ART==================== 2304s ART_Illumina (2008-2016) 2304s Q Version 2.5.8 (June 6, 2016) 2304s Contact: Weichun Huang 2304s ------------------------------------------- 2304s 2304s Paired-end sequencing simulation 2304s 2304s Total CPU time used: 0.153115 2304s 2304s The random seed for the run: 777 2304s 2304s Parameters used during run 2304s Read Length: 100 2304s Genome masking 'N' cutoff frequency: 1 in 100 2304s Fold Coverage: 10X 2304s Mean Fragment Length: 500 2304s Standard Deviation: 10 2304s Profile Type: Combined 2304s ID Tag: 2304s 2304s Quality Profile(s) 2304s First Read: HiSeqX v2.5 PCR free Length 151 R1 (built-in profile) 2304s First Read: HiSeqX v2.5 PCR free Length 151 R2 (built-in profile) 2304s 2304s Output files 2304s 2304s FASTQ Sequence Files: 2304s the 1st reads: ./paired_end_com_f11.fq 2304s the 2nd reads: ./paired_end_com_f12.fq 2304s 2304s ALN Alignment Files: 2304s the 1st reads: ./paired_end_com_f11.aln 2304s the 2nd reads: ./paired_end_com_f12.aln 2304s 2304s SAM Alignment File: 2304s ./paired_end_com_f1.sam 2304s 2304s 2304s ====================ART==================== 2304s ART_Illumina (2008-2016) 2304s Q Version 2.5.8 (June 6, 2016) 2304s Contact: Weichun Huang 2304s ------------------------------------------- 2304s 2305s Paired-end sequencing simulation 2305s 2305s Total CPU time used: 0.157983 2305s 2305s The random seed for the run: 777 2305s 2305s Parameters used during run 2305s Read Length: 100 2305s Genome masking 'N' cutoff frequency: 1 in 100 2305s Fold Coverage: 10X 2305s Mean Fragment Length: 500 2305s Standard Deviation: 10 2305s Profile Type: Combined 2305s ID Tag: 2305s 2305s Quality Profile(s) 2305s First Read: HiSeqX v2.5 PCR free Length 151 R1 (built-in profile) 2305s First Read: HiSeqX v2.5 PCR free Length 151 R2 (built-in profile) 2305s 2305s Output files 2305s 2305s FASTQ Sequence Files: 2305s the 1st reads: ./paired_end_com_f21.fq 2305s the 2nd reads: ./paired_end_com_f22.fq 2305s 2305s ALN Alignment Files: 2305s the 1st reads: ./paired_end_com_f21.aln 2305s the 2nd reads: ./paired_end_com_f22.aln 2305s 2305s SAM Alignment File: 2305s ./paired_end_com_f2.sam 2305s 2305s 2305s ====================ART==================== 2305s ART_Illumina (2008-2016) 2305s Q Version 2.5.8 (June 6, 2016) 2305s Contact: Weichun Huang 2305s ------------------------------------------- 2305s 2305s Paired-end sequencing simulation 2305s 2305s Total CPU time used: 0.175731 2305s 2305s The random seed for the run: 1713492252 2305s 2305s Parameters used during run 2305s Read Length: 100 2305s Genome masking 'N' cutoff frequency: 1 in 100 2305s Fold Coverage: 10X 2305s Mean Fragment Length: 500 2305s Standard Deviation: 10 2305s First quality shift: 10 2305s Second quality shift: 10 2305s Profile Type: Combined 2305s ID Tag: 2305s 2305s Quality Profile(s) 2305s First Read: HiSeq 2000 Length 100 R1 (built-in profile) 2305s First Read: HiSeq 2000 Length 100 R2 (built-in profile) 2305s 2305s Output files 2305s 2305s FASTQ Sequence Files: 2305s the 1st reads: ./paired_end_com_f11.fq 2305s the 2nd reads: ./paired_end_com_f12.fq 2305s 2305s ALN Alignment Files: 2305s the 1st reads: ./paired_end_com_f11.aln 2305s the 2nd reads: ./paired_end_com_f12.aln 2305s 2305s SAM Alignment File: 2305s ./paired_end_com_f1.sam 2305s 2305s 2305s ====================ART==================== 2305s ART_Illumina (2008-2016) 2305s Q Version 2.5.8 (June 6, 2016) 2305s Contact: Weichun Huang 2305s ------------------------------------------- 2305s 2305s Paired-end sequencing simulation 2305s 2305s Total CPU time used: 0.141114 2305s 2305s The random seed for the run: 1713492252 2305s 2305s Parameters used during run 2305s Read Length: 75 2305s 'N' genomic regions masking turned off 2305s Fold Coverage: 10X 2305s Mean Fragment Length: 500 2305s Standard Deviation: 10 2305s Profile Type: Combined 2305s ID Tag: 2305s 2305s Quality Profile(s) 2305s First Read: NextSeq 500 v2 Length 76 R1 (built-in profile) 2305s First Read: NextSeq 500 v2 Length 76 R2 (built-in profile) 2305s 2305s Output files 2305s 2305s FASTQ Sequence Files: 2305s the 1st reads: ./paired_nomask1.fq 2305s the 2nd reads: ./paired_nomask2.fq 2305s 2305s ALN Alignment Files: 2305s the 1st reads: ./paired_nomask1.aln 2305s the 2nd reads: ./paired_nomask2.aln 2305s 2305s SAM Alignment File: 2305s ./paired_nomask.sam 2305s 2305s autopkgtest [02:04:12]: test run-unit-test: -----------------------] 2306s autopkgtest [02:04:13]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 2306s run-unit-test PASS 2308s autopkgtest [02:04:15]: @@@@@@@@@@@@@@@@@@@@ summary 2308s run-unit-test PASS 2334s Creating nova instance adt-noble-arm64-art-nextgen-simulation-tools-20240419-012546-juju-7f2275-prod-proposed-migration-environment-2-62cbee7e-c702-466d-a663-1f0d4667dcab from image adt/ubuntu-noble-arm64-server-20240418.img (UUID 6f8e97a7-9a55-4e99-9797-31213b709dd4)...