0s autopkgtest [11:55:45]: starting date: 2024-03-18
  0s autopkgtest [11:55:45]: git checkout: 399018f5 lib/adt_testbed.py: Fix supression of warning messages from apt
  0s autopkgtest [11:55:45]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.dzr1bp24/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:openmpi,src:ampliconnoise,src:eztrace,src:gatb-core,src:gyoto,src:murasaki,src:pmix --apt-upgrade adios --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=openmpi/4.1.6-7ubuntu1 ampliconnoise/1.29-10build2 eztrace/2.1-6 gatb-core/1.4.2+dfsg-13build1 gyoto/2.0.2-1.1build2 murasaki/1.68.6-13build5 pmix/5.0.1-4.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-19.secgroup --name adt-noble-arm64-adios-20240318-115545-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
104s autopkgtest [11:57:29]: @@@@@@@@@@@@@@@@@@@@ test bed setup
104s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
104s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB]
104s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
104s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3727 kB]
105s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [485 kB]
105s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [654 kB]
105s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
105s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB]
105s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
105s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4127 kB]
105s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
105s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.3 kB]
105s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
108s Fetched 9270 kB in 2s (4616 kB/s)
108s Reading package lists...
112s Reading package lists...
112s Building dependency tree...
112s Reading state information...
112s Calculating upgrade...
113s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
113s Reading package lists...
113s Building dependency tree...
113s Reading state information...
114s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
115s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
115s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
115s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
115s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
116s Reading package lists...
116s Reading package lists...
117s Building dependency tree...
117s Reading state information...
117s Calculating upgrade...
118s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
118s Reading package lists...
118s Building dependency tree...
118s Reading state information...
119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
120s autopkgtest [11:57:45]: testbed dpkg architecture: arm64
121s autopkgtest [11:57:46]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 02:53:31 UTC 2024
121s autopkgtest [11:57:46]: @@@@@@@@@@@@@@@@@@@@ apt-source adios
124s Get:1 http://ftpmaster.internal/ubuntu noble/universe adios 1.13.1-34 (dsc) [3117 B]
124s Get:2 http://ftpmaster.internal/ubuntu noble/universe adios 1.13.1-34 (tar) [1894 kB]
124s Get:3 http://ftpmaster.internal/ubuntu noble/universe adios 1.13.1-34 (diff) [24.3 kB]
125s gpgv: Signature made Wed Jan  3 09:12:34 2024 UTC
125s gpgv:                using RSA key 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5
125s gpgv: Can't check signature: No public key
125s dpkg-source: warning: cannot verify inline signature for ./adios_1.13.1-34.dsc: no acceptable signature found
125s autopkgtest [11:57:50]: testing package adios version 1.13.1-34
125s autopkgtest [11:57:50]: build not needed
127s autopkgtest [11:57:52]: test command1: preparing testbed
130s Reading package lists...
131s Building dependency tree...
131s Reading state information...
131s Correcting dependencies...Starting pkgProblemResolver with broken count: 0
131s Starting 2 pkgProblemResolver with broken count: 0
131s Done
131s  Done
132s Starting pkgProblemResolver with broken count: 0
132s Starting 2 pkgProblemResolver with broken count: 0
132s Done
132s The following additional packages will be installed:
132s   libadios-bin libaec0 libamd-comgr2 libamdhip64-5 libatomic1 libblosc1
132s   libdrm-amdgpu1 libevent-pthreads-2.1-7 libfabric1 libgfortran5 libhdf5-103-1
132s   libhdf5-hl-100 libhdf5-mpich-103-1 libhdf5-mpich-hl-100
132s   libhdf5-openmpi-103-1 libhdf5-openmpi-hl-100 libhsa-runtime64-1 libhsakmt1
132s   libhwloc-plugins libhwloc15 libllvm17 libmpich12 libmunge2 libnetcdf-mpi-19
132s   libnetcdf19 libopenmpi3 libpciaccess0 libpmix2 librdmacm1t64 libsnappy1v5
132s   libsz2 libucx0 libxnvctrl0 ocl-icd-libopencl1
132s Suggested packages:
132s   opencl-icd
132s Recommended packages:
132s   libadios-dev
133s The following NEW packages will be installed:
133s   libadios-bin libaec0 libamd-comgr2 libamdhip64-5 libatomic1 libblosc1
133s   libdrm-amdgpu1 libevent-pthreads-2.1-7 libfabric1 libgfortran5 libhdf5-103-1
133s   libhdf5-hl-100 libhdf5-mpich-103-1 libhdf5-mpich-hl-100
133s   libhdf5-openmpi-103-1 libhdf5-openmpi-hl-100 libhsa-runtime64-1 libhsakmt1
133s   libhwloc-plugins libhwloc15 libllvm17 libmpich12 libmunge2 libnetcdf-mpi-19
133s   libnetcdf19 libopenmpi3 libpciaccess0 libpmix2 librdmacm1t64 libsnappy1v5
133s   libsz2 libucx0 libxnvctrl0 ocl-icd-libopencl1
133s 0 upgraded, 34 newly installed, 0 to remove and 0 not upgraded.
133s 1 not fully installed or removed.
133s Need to get 62.5 MB of archives.
133s After this operation, 281 MB of additional disk space will be used.
133s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 libsnappy1v5 arm64 1.1.10-1 [28.2 kB]
133s Get:2 http://ftpmaster.internal/ubuntu noble/universe arm64 libblosc1 arm64 1.21.5+ds-1 [25.5 kB]
133s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 14-20240303-1ubuntu1 [444 kB]
133s Get:4 http://ftpmaster.internal/ubuntu noble/universe arm64 libhwloc15 arm64 2.10.0-1 [158 kB]
133s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libllvm17 arm64 1:17.0.6-5build1 [25.0 MB]
134s Get:6 http://ftpmaster.internal/ubuntu noble/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3 [14.1 MB]
134s Get:7 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-amdgpu1 arm64 2.4.120-2 [20.4 kB]
134s Get:8 http://ftpmaster.internal/ubuntu noble/universe arm64 libhsakmt1 arm64 5.7.0-1 [63.6 kB]
134s Get:9 http://ftpmaster.internal/ubuntu noble/universe arm64 libhsa-runtime64-1 arm64 5.7.1-1 [286 kB]
134s Get:10 http://ftpmaster.internal/ubuntu noble/universe arm64 libamdhip64-5 arm64 5.2.3-12 [5134 kB]
134s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 librdmacm1t64 arm64 50.0-2 [70.6 kB]
134s Get:12 http://ftpmaster.internal/ubuntu noble/universe arm64 libucx0 arm64 1.16.0+ds-4 [1076 kB]
134s Get:13 http://ftpmaster.internal/ubuntu noble/universe arm64 libmpich12 arm64 4.1.2-3 [6205 kB]
135s Get:14 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB]
135s Get:15 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B]
135s Get:16 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-mpich-103-1 arm64 1.10.10+repack-3ubuntu1 [1240 kB]
135s Get:17 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-mpich-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB]
135s Get:18 http://ftpmaster.internal/ubuntu noble/main arm64 libevent-pthreads-2.1-7 arm64 2.1.12-stable-9 [7738 B]
135s Get:19 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 14-20240303-1ubuntu1 [11.4 kB]
135s Get:20 http://ftpmaster.internal/ubuntu noble/universe arm64 libfabric1 arm64 1.17.0-3 [537 kB]
135s Get:21 http://ftpmaster.internal/ubuntu noble/universe arm64 libmunge2 arm64 0.5.15-3ubuntu1 [14.8 kB]
135s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libpciaccess0 arm64 0.17-3 [18.6 kB]
135s Get:23 http://ftpmaster.internal/ubuntu noble/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu1 [11.1 kB]
135s Get:24 http://ftpmaster.internal/ubuntu noble/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1 [37.3 kB]
135s Get:25 http://ftpmaster.internal/ubuntu noble/universe arm64 libhwloc-plugins arm64 2.10.0-1 [15.7 kB]
135s Get:26 http://ftpmaster.internal/ubuntu noble/universe arm64 libpmix2 arm64 5.0.1-4 [659 kB]
135s Get:27 http://ftpmaster.internal/ubuntu noble/universe arm64 libopenmpi3 arm64 4.1.6-5ubuntu1 [3081 kB]
135s Get:28 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-openmpi-103-1 arm64 1.10.10+repack-3ubuntu1 [1241 kB]
135s Get:29 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-openmpi-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB]
135s Get:30 http://ftpmaster.internal/ubuntu noble/universe arm64 libnetcdf-mpi-19 arm64 1:4.9.0-1ubuntu1 [505 kB]
135s Get:31 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.10+repack-3ubuntu1 [1189 kB]
135s Get:32 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.10+repack-3ubuntu1 [55.5 kB]
135s Get:33 http://ftpmaster.internal/ubuntu noble/universe arm64 libnetcdf19 arm64 1:4.9.2-3ubuntu1 [470 kB]
135s Get:34 http://ftpmaster.internal/ubuntu noble/universe arm64 libadios-bin arm64 1.13.1-34 [577 kB]
136s Fetched 62.5 MB in 2s (26.7 MB/s)
136s Selecting previously unselected package libsnappy1v5:arm64.
136s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
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(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74758 files and directories currently installed.)
136s Preparing to unpack .../00-libsnappy1v5_1.1.10-1_arm64.deb ...
136s Unpacking libsnappy1v5:arm64 (1.1.10-1) ...
136s Selecting previously unselected package libblosc1:arm64.
136s Preparing to unpack .../01-libblosc1_1.21.5+ds-1_arm64.deb ...
136s Unpacking libblosc1:arm64 (1.21.5+ds-1) ...
136s Selecting previously unselected package libgfortran5:arm64.
136s Preparing to unpack .../02-libgfortran5_14-20240303-1ubuntu1_arm64.deb ...
136s Unpacking libgfortran5:arm64 (14-20240303-1ubuntu1) ...
136s Selecting previously unselected package libhwloc15:arm64.
136s Preparing to unpack .../03-libhwloc15_2.10.0-1_arm64.deb ...
136s Unpacking libhwloc15:arm64 (2.10.0-1) ...
136s Selecting previously unselected package libllvm17:arm64.
136s Preparing to unpack .../04-libllvm17_1%3a17.0.6-5build1_arm64.deb ...
136s Unpacking libllvm17:arm64 (1:17.0.6-5build1) ...
137s Selecting previously unselected package libamd-comgr2:arm64.
137s Preparing to unpack .../05-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3_arm64.deb ...
137s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3) ...
137s Selecting previously unselected package libdrm-amdgpu1:arm64.
137s Preparing to unpack .../06-libdrm-amdgpu1_2.4.120-2_arm64.deb ...
137s Unpacking libdrm-amdgpu1:arm64 (2.4.120-2) ...
137s Selecting previously unselected package libhsakmt1:arm64.
137s Preparing to unpack .../07-libhsakmt1_5.7.0-1_arm64.deb ...
137s Unpacking libhsakmt1:arm64 (5.7.0-1) ...
137s Selecting previously unselected package libhsa-runtime64-1.
137s Preparing to unpack .../08-libhsa-runtime64-1_5.7.1-1_arm64.deb ...
137s Unpacking libhsa-runtime64-1 (5.7.1-1) ...
137s Selecting previously unselected package libamdhip64-5.
137s Preparing to unpack .../09-libamdhip64-5_5.2.3-12_arm64.deb ...
137s Unpacking libamdhip64-5 (5.2.3-12) ...
137s Selecting previously unselected package librdmacm1t64:arm64.
137s Preparing to unpack .../10-librdmacm1t64_50.0-2_arm64.deb ...
137s Unpacking librdmacm1t64:arm64 (50.0-2) ...
137s Selecting previously unselected package libucx0:arm64.
137s Preparing to unpack .../11-libucx0_1.16.0+ds-4_arm64.deb ...
137s Unpacking libucx0:arm64 (1.16.0+ds-4) ...
137s Selecting previously unselected package libmpich12:arm64.
137s Preparing to unpack .../12-libmpich12_4.1.2-3_arm64.deb ...
137s Unpacking libmpich12:arm64 (4.1.2-3) ...
137s Selecting previously unselected package libaec0:arm64.
137s Preparing to unpack .../13-libaec0_1.1.2-1_arm64.deb ...
137s Unpacking libaec0:arm64 (1.1.2-1) ...
137s Selecting previously unselected package libsz2:arm64.
137s Preparing to unpack .../14-libsz2_1.1.2-1_arm64.deb ...
137s Unpacking libsz2:arm64 (1.1.2-1) ...
138s Selecting previously unselected package libhdf5-mpich-103-1:arm64.
138s Preparing to unpack .../15-libhdf5-mpich-103-1_1.10.10+repack-3ubuntu1_arm64.deb ...
138s Unpacking libhdf5-mpich-103-1:arm64 (1.10.10+repack-3ubuntu1) ...
138s Selecting previously unselected package libhdf5-mpich-hl-100:arm64.
138s Preparing to unpack .../16-libhdf5-mpich-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ...
138s Unpacking libhdf5-mpich-hl-100:arm64 (1.10.10+repack-3ubuntu1) ...
138s Selecting previously unselected package libevent-pthreads-2.1-7:arm64.
138s Preparing to unpack .../17-libevent-pthreads-2.1-7_2.1.12-stable-9_arm64.deb ...
138s Unpacking libevent-pthreads-2.1-7:arm64 (2.1.12-stable-9) ...
138s Selecting previously unselected package libatomic1:arm64.
138s Preparing to unpack .../18-libatomic1_14-20240303-1ubuntu1_arm64.deb ...
138s Unpacking libatomic1:arm64 (14-20240303-1ubuntu1) ...
138s Selecting previously unselected package libfabric1:arm64.
138s Preparing to unpack .../19-libfabric1_1.17.0-3_arm64.deb ...
138s Unpacking libfabric1:arm64 (1.17.0-3) ...
138s Selecting previously unselected package libmunge2:arm64.
138s Preparing to unpack .../20-libmunge2_0.5.15-3ubuntu1_arm64.deb ...
138s Unpacking libmunge2:arm64 (0.5.15-3ubuntu1) ...
138s Selecting previously unselected package libpciaccess0:arm64.
138s Preparing to unpack .../21-libpciaccess0_0.17-3_arm64.deb ...
138s Unpacking libpciaccess0:arm64 (0.17-3) ...
138s Selecting previously unselected package libxnvctrl0:arm64.
138s Preparing to unpack .../22-libxnvctrl0_510.47.03-0ubuntu1_arm64.deb ...
138s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu1) ...
138s Selecting previously unselected package ocl-icd-libopencl1:arm64.
138s Preparing to unpack .../23-ocl-icd-libopencl1_2.3.2-1_arm64.deb ...
138s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1) ...
138s Selecting previously unselected package libhwloc-plugins:arm64.
139s Preparing to unpack .../24-libhwloc-plugins_2.10.0-1_arm64.deb ...
139s Unpacking libhwloc-plugins:arm64 (2.10.0-1) ...
139s Selecting previously unselected package libpmix2:arm64.
139s Preparing to unpack .../25-libpmix2_5.0.1-4_arm64.deb ...
139s Unpacking libpmix2:arm64 (5.0.1-4) ...
139s Selecting previously unselected package libopenmpi3:arm64.
139s Preparing to unpack .../26-libopenmpi3_4.1.6-5ubuntu1_arm64.deb ...
139s Unpacking libopenmpi3:arm64 (4.1.6-5ubuntu1) ...
139s Selecting previously unselected package libhdf5-openmpi-103-1:arm64.
139s Preparing to unpack .../27-libhdf5-openmpi-103-1_1.10.10+repack-3ubuntu1_arm64.deb ...
139s Unpacking libhdf5-openmpi-103-1:arm64 (1.10.10+repack-3ubuntu1) ...
139s Selecting previously unselected package libhdf5-openmpi-hl-100:arm64.
139s Preparing to unpack .../28-libhdf5-openmpi-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ...
139s Unpacking libhdf5-openmpi-hl-100:arm64 (1.10.10+repack-3ubuntu1) ...
139s Selecting previously unselected package libnetcdf-mpi-19:arm64.
139s Preparing to unpack .../29-libnetcdf-mpi-19_1%3a4.9.0-1ubuntu1_arm64.deb ...
139s Unpacking libnetcdf-mpi-19:arm64 (1:4.9.0-1ubuntu1) ...
139s Selecting previously unselected package libhdf5-103-1:arm64.
139s Preparing to unpack .../30-libhdf5-103-1_1.10.10+repack-3ubuntu1_arm64.deb ...
139s Unpacking libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ...
140s Selecting previously unselected package libhdf5-hl-100:arm64.
140s Preparing to unpack .../31-libhdf5-hl-100_1.10.10+repack-3ubuntu1_arm64.deb ...
140s Unpacking libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ...
140s Selecting previously unselected package libnetcdf19:arm64.
140s Preparing to unpack .../32-libnetcdf19_1%3a4.9.2-3ubuntu1_arm64.deb ...
140s Unpacking libnetcdf19:arm64 (1:4.9.2-3ubuntu1) ...
140s Selecting previously unselected package libadios-bin.
140s Preparing to unpack .../33-libadios-bin_1.13.1-34_arm64.deb ...
140s Unpacking libadios-bin (1.13.1-34) ...
140s Setting up libpciaccess0:arm64 (0.17-3) ...
140s Setting up libaec0:arm64 (1.1.2-1) ...
140s Setting up libsnappy1v5:arm64 (1.1.10-1) ...
140s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu1) ...
140s Setting up libmunge2:arm64 (0.5.15-3ubuntu1) ...
140s Setting up libhwloc15:arm64 (2.10.0-1) ...
140s Setting up libatomic1:arm64 (14-20240303-1ubuntu1) ...
140s Setting up libgfortran5:arm64 (14-20240303-1ubuntu1) ...
140s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1) ...
140s Setting up libblosc1:arm64 (1.21.5+ds-1) ...
140s Setting up librdmacm1t64:arm64 (50.0-2) ...
140s Setting up libllvm17:arm64 (1:17.0.6-5build1) ...
140s Setting up libsz2:arm64 (1.1.2-1) ...
140s Setting up libevent-pthreads-2.1-7:arm64 (2.1.12-stable-9) ...
140s Setting up libdrm-amdgpu1:arm64 (2.4.120-2) ...
140s Setting up libfabric1:arm64 (1.17.0-3) ...
140s Setting up libhwloc-plugins:arm64 (2.10.0-1) ...
140s Setting up libhdf5-103-1:arm64 (1.10.10+repack-3ubuntu1) ...
140s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3) ...
140s Setting up libhsakmt1:arm64 (5.7.0-1) ...
140s Setting up libhdf5-hl-100:arm64 (1.10.10+repack-3ubuntu1) ...
140s Setting up libpmix2:arm64 (5.0.1-4) ...
140s Setting up libnetcdf19:arm64 (1:4.9.2-3ubuntu1) ...
140s Setting up libhsa-runtime64-1 (5.7.1-1) ...
140s Setting up libamdhip64-5 (5.2.3-12) ...
140s Setting up libucx0:arm64 (1.16.0+ds-4) ...
140s Setting up libopenmpi3:arm64 (4.1.6-5ubuntu1) ...
140s Setting up libmpich12:arm64 (4.1.2-3) ...
140s Setting up libhdf5-openmpi-103-1:arm64 (1.10.10+repack-3ubuntu1) ...
140s Setting up libhdf5-mpich-103-1:arm64 (1.10.10+repack-3ubuntu1) ...
140s Setting up libhdf5-openmpi-hl-100:arm64 (1.10.10+repack-3ubuntu1) ...
140s Setting up libhdf5-mpich-hl-100:arm64 (1.10.10+repack-3ubuntu1) ...
140s Setting up libnetcdf-mpi-19:arm64 (1:4.9.0-1ubuntu1) ...
140s Setting up libadios-bin (1.13.1-34) ...
140s update-alternatives: using /usr/bin/adios_lint.openmpi to provide /usr/bin/adios_lint (adios) in auto mode
140s Setting up autopkgtest-satdep (0) ...
140s Processing triggers for man-db (2.12.0-3) ...
140s Processing triggers for libc-bin (2.39-0ubuntu2) ...
145s (Reading database ... 75244 files and directories currently installed.)
145s Removing autopkgtest-satdep (0) ...
146s autopkgtest [11:58:11]: test command1: set -e ; adios_config 2> /dev/null
146s autopkgtest [11:58:11]: test command1: [-----------------------
147s DIR=/usr
147s CFLAGS=
147s LDFLAGS=
147s autopkgtest [11:58:12]: test command1: -----------------------]
148s command1             PASS
148s autopkgtest [11:58:13]: test command1:  - - - - - - - - - - results - - - - - - - - - -
148s autopkgtest [11:58:13]: test command2: preparing testbed
402s autopkgtest [12:02:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup
403s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
403s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3727 kB]
404s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [485 kB]
404s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
404s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB]
404s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [654 kB]
404s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
404s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB]
404s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
404s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4127 kB]
404s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
404s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.3 kB]
404s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
406s Fetched 9270 kB in 2s (5413 kB/s)
406s Reading package lists...
409s Reading package lists...
409s Building dependency tree...
409s Reading state information...
410s Calculating upgrade...
411s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
411s Reading package lists...
411s Building dependency tree...
411s Reading state information...
412s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
413s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
413s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
413s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
413s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
415s Reading package lists...
415s Reading package lists...
416s Building dependency tree...
416s Reading state information...
416s Calculating upgrade...
417s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
417s Reading package lists...
417s Building dependency tree...
417s Reading state information...
418s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
418s autopkgtest [12:02:43]: testbed dpkg architecture: arm64
434s Reading package lists...
435s Building dependency tree...
435s Reading state information...
435s Correcting dependencies...Starting pkgProblemResolver with broken count: 0
436s Starting 2 pkgProblemResolver with broken count: 0
436s Done
436s  Done
437s Starting pkgProblemResolver with broken count: 0
437s Starting 2 pkgProblemResolver with broken count: 0
437s Done
438s The following additional packages will be installed:
438s   libadios-dev libpkgconf3 pkg-config pkgconf pkgconf-bin
438s Recommended packages:
438s   libadios-bin
438s The following NEW packages will be installed:
438s   libadios-dev libpkgconf3 pkg-config pkgconf pkgconf-bin
438s 0 upgraded, 5 newly installed, 0 to remove and 0 not upgraded.
438s 1 not fully installed or removed.
438s Need to get 975 kB of archives.
438s After this operation, 9606 kB of additional disk space will be used.
438s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB]
438s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB]
438s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB]
438s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B]
438s Get:5 http://ftpmaster.internal/ubuntu noble/universe arm64 libadios-dev arm64 1.13.1-34 [899 kB]
439s Fetched 975 kB in 1s (1660 kB/s)
439s Selecting previously unselected package libpkgconf3:arm64.
439s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74758 files and directories currently installed.)
439s Preparing to unpack .../libpkgconf3_1.8.1-2_arm64.deb ...
439s Unpacking libpkgconf3:arm64 (1.8.1-2) ...
439s Selecting previously unselected package pkgconf-bin.
439s Preparing to unpack .../pkgconf-bin_1.8.1-2_arm64.deb ...
439s Unpacking pkgconf-bin (1.8.1-2) ...
439s Selecting previously unselected package pkgconf:arm64.
439s Preparing to unpack .../pkgconf_1.8.1-2_arm64.deb ...
439s Unpacking pkgconf:arm64 (1.8.1-2) ...
439s Selecting previously unselected package pkg-config:arm64.
439s Preparing to unpack .../pkg-config_1.8.1-2_arm64.deb ...
439s Unpacking pkg-config:arm64 (1.8.1-2) ...
439s Selecting previously unselected package libadios-dev:arm64.
439s Preparing to unpack .../libadios-dev_1.13.1-34_arm64.deb ...
439s Unpacking libadios-dev:arm64 (1.13.1-34) ...
439s Setting up libpkgconf3:arm64 (1.8.1-2) ...
439s Setting up pkgconf-bin (1.8.1-2) ...
439s Setting up pkgconf:arm64 (1.8.1-2) ...
439s Setting up pkg-config:arm64 (1.8.1-2) ...
439s Setting up libadios-dev:arm64 (1.13.1-34) ...
439s Setting up autopkgtest-satdep (0) ...
439s Processing triggers for man-db (2.12.0-3) ...
440s Processing triggers for libc-bin (2.39-0ubuntu2) ...
444s (Reading database ... 74826 files and directories currently installed.)
444s Removing autopkgtest-satdep (0) ...
447s autopkgtest [12:03:12]: test command2: set -e ; pkg-config adios --libs 2> /dev/null
447s autopkgtest [12:03:12]: test command2: [-----------------------
447s -ladios_nompi -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu/hdf5/serial -libverbs -lnetcdf -lhdf5_hl -lhdf5 -lglib-2.0 -lz -lbz2 -lsz -llz4 -lblosc -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -lm -lpthread 
448s autopkgtest [12:03:13]: test command2: -----------------------]
448s autopkgtest [12:03:13]: test command2:  - - - - - - - - - - results - - - - - - - - - -
448s command2             PASS
449s autopkgtest [12:03:14]: test command3: preparing testbed
539s autopkgtest [12:04:44]: @@@@@@@@@@@@@@@@@@@@ test bed setup
539s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
540s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB]
540s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3727 kB]
540s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
540s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [485 kB]
540s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [654 kB]
540s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 c-n-f Metadata [3144 B]
540s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [33.6 kB]
540s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 c-n-f Metadata [116 B]
540s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [4127 kB]
540s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 c-n-f Metadata [8528 B]
540s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [55.3 kB]
540s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 c-n-f Metadata [116 B]
542s Fetched 9270 kB in 2s (5083 kB/s)
543s Reading package lists...
545s Reading package lists...
546s Building dependency tree...
546s Reading state information...
546s Calculating upgrade...
546s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
547s Reading package lists...
547s Building dependency tree...
547s Reading state information...
548s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
548s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
548s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
548s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
548s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
550s Reading package lists...
550s Reading package lists...
550s Building dependency tree...
550s Reading state information...
551s Calculating upgrade...
551s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
551s Reading package lists...
552s Building dependency tree...
552s Reading state information...
552s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
553s autopkgtest [12:04:58]: testbed dpkg architecture: arm64
573s Reading package lists...
573s Building dependency tree...
573s Reading state information...
573s Correcting dependencies...Starting pkgProblemResolver with broken count: 0
573s Starting 2 pkgProblemResolver with broken count: 0
573s Done
574s  Done
574s Starting pkgProblemResolver with broken count: 0
574s Starting 2 pkgProblemResolver with broken count: 0
574s Done
575s The following additional packages will be installed:
575s   libadios-dev libadios-openmpi-dev libpkgconf3 pkg-config pkgconf pkgconf-bin
575s Recommended packages:
575s   libadios-bin libadios-examples
575s The following NEW packages will be installed:
575s   libadios-dev libadios-openmpi-dev libpkgconf3 pkg-config pkgconf pkgconf-bin
575s 0 upgraded, 6 newly installed, 0 to remove and 0 not upgraded.
575s 1 not fully installed or removed.
575s Need to get 2042 kB of archives.
575s After this operation, 18.5 MB of additional disk space will be used.
575s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 libpkgconf3 arm64 1.8.1-2 [31.2 kB]
575s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf-bin arm64 1.8.1-2 [20.4 kB]
575s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 pkgconf arm64 1.8.1-2 [16.7 kB]
575s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 pkg-config arm64 1.8.1-2 [7170 B]
575s Get:5 http://ftpmaster.internal/ubuntu noble/universe arm64 libadios-dev arm64 1.13.1-34 [899 kB]
575s Get:6 http://ftpmaster.internal/ubuntu noble/universe arm64 libadios-openmpi-dev arm64 1.13.1-34 [1068 kB]
577s Fetched 2042 kB in 1s (3132 kB/s)
577s Selecting previously unselected package libpkgconf3:arm64.
577s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74758 files and directories currently installed.)
577s Preparing to unpack .../0-libpkgconf3_1.8.1-2_arm64.deb ...
577s Unpacking libpkgconf3:arm64 (1.8.1-2) ...
577s Selecting previously unselected package pkgconf-bin.
578s Preparing to unpack .../1-pkgconf-bin_1.8.1-2_arm64.deb ...
578s Unpacking pkgconf-bin (1.8.1-2) ...
578s Selecting previously unselected package pkgconf:arm64.
578s Preparing to unpack .../2-pkgconf_1.8.1-2_arm64.deb ...
578s Unpacking pkgconf:arm64 (1.8.1-2) ...
578s Selecting previously unselected package pkg-config:arm64.
578s Preparing to unpack .../3-pkg-config_1.8.1-2_arm64.deb ...
578s Unpacking pkg-config:arm64 (1.8.1-2) ...
579s Selecting previously unselected package libadios-dev:arm64.
579s Preparing to unpack .../4-libadios-dev_1.13.1-34_arm64.deb ...
579s Unpacking libadios-dev:arm64 (1.13.1-34) ...
579s Selecting previously unselected package libadios-openmpi-dev:arm64.
579s Preparing to unpack .../5-libadios-openmpi-dev_1.13.1-34_arm64.deb ...
579s Unpacking libadios-openmpi-dev:arm64 (1.13.1-34) ...
579s Setting up libpkgconf3:arm64 (1.8.1-2) ...
579s Setting up pkgconf-bin (1.8.1-2) ...
579s Setting up pkgconf:arm64 (1.8.1-2) ...
579s Setting up pkg-config:arm64 (1.8.1-2) ...
579s Setting up libadios-dev:arm64 (1.13.1-34) ...
579s Setting up libadios-openmpi-dev:arm64 (1.13.1-34) ...
579s update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/adios-openmpi.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/adios-mpi.pc (adios-mpi.pc) in auto mode
579s Setting up autopkgtest-satdep (0) ...
579s Processing triggers for man-db (2.12.0-3) ...
579s Processing triggers for libc-bin (2.39-0ubuntu2) ...
587s (Reading database ... 74847 files and directories currently installed.)
587s Removing autopkgtest-satdep (0) ...
590s autopkgtest [12:05:35]: test command3: set -e ; pkg-config adios-mpi --libs 2> /dev/null
590s autopkgtest [12:05:35]: test command3: [-----------------------
590s -ladios -L/usr/lib/aarch64-linux-gnu/netcdf/mpi -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib64 -lnetcdf -lhdf5_hl -lhdf5 -libverbs -lglib-2.0 -lz -lbz2 -lsz -llz4 -lblosc -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -lm -lpthread 
591s autopkgtest [12:05:36]: test command3: -----------------------]
591s autopkgtest [12:05:36]: test command3:  - - - - - - - - - - results - - - - - - - - - -
591s command3             PASS
592s autopkgtest [12:05:37]: @@@@@@@@@@@@@@@@@@@@ summary
592s command1             PASS
592s command2             PASS
592s command3             PASS
596s Creating nova instance adt-noble-arm64-adios-20240318-115545-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240318.img (UUID 6b9ea2ac-1792-4f95-a56d-e128e96ab6e9)...
596s Creating nova instance adt-noble-arm64-adios-20240318-115545-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240318.img (UUID 6b9ea2ac-1792-4f95-a56d-e128e96ab6e9)...
596s Creating nova instance adt-noble-arm64-adios-20240318-115545-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20240318.img (UUID 6b9ea2ac-1792-4f95-a56d-e128e96ab6e9)...