0s autopkgtest [07:16:57]: starting date and time: 2024-03-25 07:16:57+0000 0s autopkgtest [07:16:57]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [07:16:57]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.xdfs9_pe/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed --apt-upgrade r-other-rajewsky-dropbead --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-38.secgroup --name adt-noble-amd64-r-other-rajewsky-dropbead-20240325-071656-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 487s autopkgtest [07:25:04]: testbed dpkg architecture: amd64 488s autopkgtest [07:25:05]: testbed apt version: 2.7.12 488s autopkgtest [07:25:05]: @@@@@@@@@@@@@@@@@@@@ test bed setup 488s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 488s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB] 488s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3987 kB] 488s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.8 kB] 488s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 488s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [488 kB] 488s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [726 kB] 488s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 488s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 488s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 488s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 488s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1298 kB] 488s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4422 kB] 488s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 488s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [97.5 kB] 488s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [29.6 kB] 488s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 491s Fetched 11.8 MB in 1s (7905 kB/s) 492s Reading package lists... 493s Reading package lists... 493s Building dependency tree... 493s Reading state information... 493s Calculating upgrade... 494s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 494s Reading package lists... 494s Building dependency tree... 494s Reading state information... 494s 0 upgraded, 0 newly installed, 0 to remove and 248 not upgraded. 495s sh: Attempting to set up Debian/Ubuntu apt sources automatically 495s sh: Distribution appears to be Ubuntu 496s Reading package lists... 496s Building dependency tree... 496s Reading state information... 496s eatmydata is already the newest version (131-1). 496s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 496s Reading package lists... 496s Building dependency tree... 496s Reading state information... 497s dbus is already the newest version (1.14.10-4ubuntu1). 497s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 497s Reading package lists... 497s Building dependency tree... 497s Reading state information... 497s rng-tools-debian is already the newest version (2.4). 497s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 497s Reading package lists... 498s Building dependency tree... 498s Reading state information... 498s The following packages will be REMOVED: 498s cloud-init* python3-configobj* python3-debconf* 498s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 498s After this operation, 3256 kB disk space will be freed. 498s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 498s Removing cloud-init (24.1.2-0ubuntu1) ... 499s Removing python3-configobj (5.0.8-3) ... 499s Removing python3-debconf (1.5.86) ... 499s Processing triggers for man-db (2.12.0-3) ... 499s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71475 files and directories currently installed.) 499s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 500s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 500s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 500s invoke-rc.d: policy-rc.d denied execution of try-restart. 500s Reading package lists... 500s Building dependency tree... 500s Reading state information... 501s linux-generic is already the newest version (6.8.0-11.11+1). 501s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 501s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 501s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 501s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 503s Reading package lists... 503s Reading package lists... 503s Building dependency tree... 503s Reading state information... 503s Calculating upgrade... 504s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 504s Reading package lists... 504s Building dependency tree... 504s Reading state information... 504s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 504s autopkgtest [07:25:21]: rebooting testbed after setup commands that affected boot 785s autopkgtest [07:30:02]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 786s autopkgtest [07:30:03]: @@@@@@@@@@@@@@@@@@@@ apt-source r-other-rajewsky-dropbead 787s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-other-rajewsky-dropbead 0.3.1+git20180221.d746c6f+ds-3 (dsc) [2420 B] 787s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-other-rajewsky-dropbead 0.3.1+git20180221.d746c6f+ds-3 (tar) [956 kB] 787s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-other-rajewsky-dropbead 0.3.1+git20180221.d746c6f+ds-3 (diff) [2876 B] 787s gpgv: Signature made Sat Sep 19 20:27:19 2020 UTC 787s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 787s gpgv: issuer "tille@debian.org" 787s gpgv: Can't check signature: No public key 787s dpkg-source: warning: cannot verify inline signature for ./r-other-rajewsky-dropbead_0.3.1+git20180221.d746c6f+ds-3.dsc: no acceptable signature found 787s autopkgtest [07:30:04]: testing package r-other-rajewsky-dropbead version 0.3.1+git20180221.d746c6f+ds-3 787s autopkgtest [07:30:04]: build not needed 790s autopkgtest [07:30:07]: test pkg-r-autopkgtest: preparing testbed 792s Reading package lists... 792s Building dependency tree... 792s Reading state information... 792s Starting pkgProblemResolver with broken count: 0 792s Starting 2 pkgProblemResolver with broken count: 0 792s Done 793s The following additional packages will be installed: 793s build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu 793s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 793s g++ g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 793s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-13 793s gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libasan8 793s libatomic1 libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev 793s libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 793s libdeflate0 libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 793s libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 793s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 793s libjpeg8-dev liblapack-dev liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 793s libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 793s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 793s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 793s libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data 793s libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 793s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 linux-libc-dev littler 793s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 793s r-bioc-biocgenerics r-bioc-biocparallel r-bioc-biostrings 793s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicranges 793s r-bioc-iranges r-bioc-rhtslib r-bioc-rsamtools r-bioc-s4vectors 793s r-bioc-xvector r-bioc-zlibbioc r-cran-bh r-cran-bitops r-cran-catools 793s r-cran-cli r-cran-codetools r-cran-colorspace r-cran-cpp11 r-cran-crayon 793s r-cran-data.table r-cran-fansi r-cran-farver r-cran-formatr 793s r-cran-futile.logger r-cran-futile.options r-cran-gdata r-cran-ggplot2 793s r-cran-glue r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools 793s r-cran-isoband r-cran-kernsmooth r-cran-labeling r-cran-lambda.r 793s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 793s r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar 793s r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-r6 r-cran-rcolorbrewer 793s r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-scales r-cran-snow 793s r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr 793s r-other-rajewsky-dropbead rpcsvc-proto unzip x11-common xdg-utils zip 793s zlib1g-dev 793s Suggested packages: 793s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 793s gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 793s gdb gcc-doc gcc-13-multilib gdb-x86-64-linux-gnu gfortran-multilib 793s gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev 793s liblapack-doc libboost-doc libboost1.83-doc libboost-atomic1.83-dev 793s libboost-chrono1.83-dev libboost-container1.83-dev libboost-context1.83-dev 793s libboost-contract1.83-dev libboost-coroutine1.83-dev 793s libboost-date-time1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev 793s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 793s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 793s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 793s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 793s libboost-numpy1.83-dev libboost-program-options1.83-dev 793s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 793s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 793s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 793s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 793s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 793s glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 793s tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 793s texlive-base texlive-latex-base texlive-plain-generic 793s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 793s texlive-latex-recommended texlive-latex-extra texinfo r-bioc-biobase 793s r-bioc-delayedarray r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 793s r-bioc-annotate r-cran-runit r-cran-foreach r-cran-bbmisc r-cran-doparallel 793s r-bioc-variantannotation r-bioc-genomicalignments r-bioc-shortread 793s r-bioc-biocstyle r-cran-knitr r-cran-batchtools r-bioc-bsgenome 793s r-bioc-genomicfeatures r-cran-r.utils r-bioc-summarizedexperiment 793s r-bioc-rtracklayer r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq 793s r-bioc-edger r-bioc-keggrest r-cran-digest r-cran-rmarkdown r-bioc-graph 793s r-cran-rpart r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny 793s r-cran-shinyjs r-cran-dplyr r-cran-png r-cran-jpeg r-cran-viridis 793s r-cran-rstudioapi r-cran-covr r-cran-jsonlite r-cran-magick r-cran-sf 793s r-cran-getopt r-cran-bit64 r-cran-dbi r-cran-formattable r-cran-nanotime 793s r-cran-palmerpenguins r-cran-stringi r-cran-survival r-cran-units 793s r-cran-vdiffr r-cran-testthat r-cran-inline r-cran-rmpi r-cran-rlecuyer 793s r-cran-bench r-cran-blob r-cran-brio r-cran-callr r-cran-evaluate 793s r-cran-here r-cran-hms r-cran-htmltools r-cran-pkgbuild r-cran-pkgload 793s r-cran-purrr r-cran-tidyr 793s Recommended packages: 793s bzip2-doc manpages manpages-dev libc-devtools libpng-tools r-recommended 793s r-doc-html r-cran-callr r-cran-covr r-cran-digest r-cran-htmltools 793s r-cran-htmlwidgets r-cran-knitr r-cran-mockery r-cran-processx r-cran-ps 793s r-cran-rmarkdown r-cran-rprojroot r-cran-rstudioapi r-cran-testthat 793s r-cran-whoami r-cran-bench r-cran-brio r-cran-decor r-cran-desc 793s r-cran-lobstr r-cran-progress r-cran-bit64 r-cran-bit r-cran-curl 793s r-cran-r.utils r-cran-xts r-cran-nanotime r-cran-zoo r-cran-yaml 793s r-cran-unitizer r-cran-testit r-cran-survival r-cran-dplyr r-cran-hexbin 793s r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis 793s r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite 793s r-cran-vdiffr r-cran-xml2 r-cran-dbi r-cran-rsqlite r-cran-waldo 793s r-cran-lintr r-cran-tidyverse r-cran-lubridate r-cran-abind 793s r-cran-doparallel r-cran-foreach r-cran-iterators r-cran-itertools 793s r-cran-xml r-cran-fs r-cran-usethis r-cran-dichromat r-cran-hms 793s r-cran-stringi r-cran-mockr r-cran-formattable r-cran-generics 793s r-cran-pkgdown r-cran-zeallot libfile-mimeinfo-perl libnet-dbus-perl 793s libx11-protocol-perl x11-utils x11-xserver-utils 793s The following NEW packages will be installed: 793s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu 793s cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config 793s fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-x86-64-linux-gnu 793s g++-x86-64-linux-gnu gcc gcc-13 gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu 793s gfortran gfortran-13 gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu 793s icu-devtools libasan8 libatomic1 libblas-dev libblas3 libboost-dev 793s libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 793s libcrypt-dev libdatrie1 libdeflate0 libfontconfig1 libgcc-13-dev 793s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 793s libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev 793s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev 793s liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev 793s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 793s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 793s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 793s libsharpyuv0 libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 793s libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 793s libxft2 libxrender1 libxss1 libxt6 linux-libc-dev littler pkg-config 793s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 793s r-bioc-biocgenerics r-bioc-biocparallel r-bioc-biostrings 793s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicranges 793s r-bioc-iranges r-bioc-rhtslib r-bioc-rsamtools r-bioc-s4vectors 793s r-bioc-xvector r-bioc-zlibbioc r-cran-bh r-cran-bitops r-cran-catools 793s r-cran-cli r-cran-codetools r-cran-colorspace r-cran-cpp11 r-cran-crayon 793s r-cran-data.table r-cran-fansi r-cran-farver r-cran-formatr 793s r-cran-futile.logger r-cran-futile.options r-cran-gdata r-cran-ggplot2 793s r-cran-glue r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools 793s r-cran-isoband r-cran-kernsmooth r-cran-labeling r-cran-lambda.r 793s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 793s r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar 793s r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-r6 r-cran-rcolorbrewer 793s r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-scales r-cran-snow 793s r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr 793s r-other-rajewsky-dropbead rpcsvc-proto unzip x11-common xdg-utils zip 793s zlib1g-dev 793s 0 upgraded, 171 newly installed, 0 to remove and 0 not upgraded. 793s Need to get 234 MB/234 MB of archives. 793s After this operation, 741 MB of additional disk space will be used. 793s Get:1 /tmp/autopkgtest.hhna0z/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [752 B] 793s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu6 [20.4 kB] 793s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 793s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 793s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 793s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu6 [2126 kB] 793s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 793s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 793s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB] 793s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B] 793s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 793s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 793s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB] 793s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 793s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB] 793s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB] 793s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB] 793s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB] 793s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB] 793s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB] 793s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB] 793s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB] 793s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB] 793s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB] 794s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB] 794s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 794s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 794s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB] 794s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB] 794s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB] 794s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 794s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 794s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 794s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 dctrl-tools amd64 2.24-3build2 [66.9 kB] 794s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 794s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 794s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB] 794s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB] 794s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig amd64 2.15.0-1ubuntu1 [180 kB] 794s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 794s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran-13-dev amd64 13.2.0-17ubuntu2 [942 kB] 794s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.6 MB] 794s Get:43 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13 amd64 13.2.0-17ubuntu2 [10.3 kB] 794s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1024 B] 794s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran amd64 4:13.2.0-7ubuntu1 [1176 B] 794s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 icu-devtools amd64 74.2-1ubuntu1 [212 kB] 794s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 794s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 libblas-dev amd64 3.12.0-3 [170 kB] 794s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 libboost1.83-dev amd64 1.83.0-2ubuntu1 [15.3 MB] 794s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 libboost-dev amd64 1.83.0.1ubuntu2 [4308 B] 794s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 libbz2-dev amd64 1.0.8-5ubuntu1 [33.6 kB] 794s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB] 794s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB] 794s Get:54 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B] 794s Get:55 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] 794s Get:56 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB] 794s Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 libdatrie1 amd64 0.2.13-3 [20.9 kB] 794s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 794s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] 794s Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] 794s Get:61 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 794s Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB] 794s Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libicu-dev amd64 74.2-1ubuntu1 [11.9 MB] 794s Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 794s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu1 [294 kB] 794s Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 794s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 794s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 794s Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 794s Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack-dev amd64 3.12.0-3 [5196 kB] 794s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 794s Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 libncurses-dev amd64 6.4+20240113-1ubuntu1 [384 kB] 794s Get:73 http://ftpmaster.internal/ubuntu noble/main amd64 libthai-data all 0.1.29-2 [158 kB] 794s Get:74 http://ftpmaster.internal/ubuntu noble/main amd64 libthai0 amd64 0.1.29-2 [18.8 kB] 794s Get:75 http://ftpmaster.internal/ubuntu noble/main amd64 libpango-1.0-0 amd64 1.51.0+ds-4 [228 kB] 794s Get:76 http://ftpmaster.internal/ubuntu noble/main amd64 libpangoft2-1.0-0 amd64 1.51.0+ds-4 [42.1 kB] 794s Get:77 http://ftpmaster.internal/ubuntu noble/main amd64 libpangocairo-1.0-0 amd64 1.51.0+ds-4 [29.0 kB] 794s Get:78 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper1 amd64 1.1.29 [13.4 kB] 794s Get:79 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper-utils amd64 1.1.29 [8658 B] 794s Get:80 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu1 [211 kB] 794s Get:81 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu1 [198 kB] 794s Get:82 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu1 [6808 B] 794s Get:83 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-dev amd64 10.42-4ubuntu1 [743 kB] 794s Get:84 http://ftpmaster.internal/ubuntu noble/main amd64 libpkgconf3 amd64 1.8.1-2 [31.1 kB] 794s Get:85 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB] 794s Get:86 http://ftpmaster.internal/ubuntu noble/main amd64 libpng-dev amd64 1.6.43-1 [264 kB] 794s Get:87 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline-dev amd64 8.2-3 [167 kB] 794s Get:88 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB] 794s Get:89 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB] 794s Get:90 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB] 794s Get:91 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 794s Get:92 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB] 794s Get:93 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] 794s Get:94 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB] 794s Get:95 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B] 794s Get:96 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.14-1 [779 kB] 794s Get:97 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB] 794s Get:98 http://ftpmaster.internal/ubuntu noble/main amd64 zip amd64 3.0-13 [176 kB] 794s Get:99 http://ftpmaster.internal/ubuntu noble/main amd64 unzip amd64 6.0-28ubuntu3 [174 kB] 794s Get:100 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 794s Get:101 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-core amd64 4.3.2-1build1 [27.0 MB] 795s Get:102 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-littler amd64 0.3.19-1 [94.1 kB] 795s Get:103 http://ftpmaster.internal/ubuntu noble/universe amd64 littler all 0.3.19-1 [2472 B] 795s Get:104 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf-bin amd64 1.8.1-2 [20.7 kB] 795s Get:105 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf amd64 1.8.1-2 [16.8 kB] 795s Get:106 http://ftpmaster.internal/ubuntu noble/main amd64 pkg-config amd64 1.8.1-2 [7170 B] 795s Get:107 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma-dev amd64 5.4.5-0.3 [205 kB] 795s Get:108 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-dev all 4.3.2-1build1 [4336 B] 795s Get:109 http://ftpmaster.internal/ubuntu noble/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 795s Get:110 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 795s Get:111 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-formatr all 1.14-1 [152 kB] 795s Get:112 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 795s Get:113 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 795s Get:114 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 795s Get:115 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 795s Get:116 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-codetools all 0.2-19-1 [90.5 kB] 795s Get:117 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 795s Get:118 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 795s Get:119 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biocparallel amd64 1.36.0-1 [1347 kB] 795s Get:120 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-s4vectors amd64 0.40.2+dfsg-1 [2056 kB] 795s Get:121 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-iranges amd64 2.36.0-1 [2252 kB] 795s Get:122 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 795s Get:123 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-xvector amd64 0.42.0-1 [621 kB] 795s Get:124 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-bitops amd64 1.0-7-1 [29.8 kB] 795s Get:125 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcurl amd64 1.98-1.14+dfsg-1 [793 kB] 795s Get:126 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 795s Get:127 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 795s Get:128 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 795s Get:129 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-biostrings amd64 2.70.2+dfsg-1 [13.6 MB] 795s Get:130 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-genomicranges amd64 1.54.1+dfsg-1 [1823 kB] 795s Get:131 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-rhtslib amd64 2.4.1+dfsg-1 [1361 kB] 795s Get:132 http://ftpmaster.internal/ubuntu noble/universe amd64 r-bioc-rsamtools amd64 2.18.0+dfsg-1 [3640 kB] 795s Get:133 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 795s Get:134 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 795s Get:135 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1541 kB] 795s Get:136 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-data.table amd64 1.14.10+dfsg-1 [1837 kB] 795s Get:137 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 795s Get:138 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-farver amd64 2.1.1-1 [1353 kB] 795s Get:139 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 795s Get:140 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gdata all 3.0.0-1 [483 kB] 795s Get:141 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 795s Get:142 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rlang amd64 1.1.3-1 [1663 kB] 795s Get:143 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 795s Get:144 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 795s Get:145 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 795s Get:146 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mass amd64 7.3-60.0.1-1 [1119 kB] 795s Get:147 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-lattice amd64 0.22-5-1 [1342 kB] 795s Get:148 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-nlme amd64 3.1.164-1 [2260 kB] 796s Get:149 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-matrix amd64 1.6-5-1 [3830 kB] 796s Get:150 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 796s Get:151 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 796s Get:152 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-munsell all 0.5.0-2build1 [208 kB] 796s Get:153 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 796s Get:154 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 796s Get:155 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 796s Get:156 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 796s Get:157 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 796s Get:158 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 796s Get:159 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 796s Get:160 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 796s Get:161 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 796s Get:162 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 796s Get:163 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-withr all 2.5.0-1 [225 kB] 796s Get:164 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 796s Get:165 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-kernsmooth amd64 2.23-22-1 [91.7 kB] 796s Get:166 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gplots all 3.1.3.1-1 [589 kB] 796s Get:167 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 796s Get:168 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 796s Get:169 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-rcpp amd64 1.0.12-1 [1981 kB] 796s Get:170 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 796s Get:171 http://ftpmaster.internal/ubuntu noble/universe amd64 r-other-rajewsky-dropbead all 0.3.1+git20180221.d746c6f+ds-3 [252 kB] 796s Preconfiguring packages ... 796s Fetched 234 MB in 3s (85.8 MB/s) 797s Selecting previously unselected package libc-dev-bin. 797s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71420 files and directories currently installed.) 797s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu6_amd64.deb ... 797s Unpacking libc-dev-bin (2.39-0ubuntu6) ... 797s Selecting previously unselected package linux-libc-dev:amd64. 797s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_amd64.deb ... 797s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 797s Selecting previously unselected package libcrypt-dev:amd64. 797s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 797s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 797s Selecting previously unselected package rpcsvc-proto. 797s Preparing to unpack .../003-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 797s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 797s Selecting previously unselected package libc6-dev:amd64. 797s Preparing to unpack .../004-libc6-dev_2.39-0ubuntu6_amd64.deb ... 797s Unpacking libc6-dev:amd64 (2.39-0ubuntu6) ... 797s Selecting previously unselected package libisl23:amd64. 797s Preparing to unpack .../005-libisl23_0.26-3_amd64.deb ... 797s Unpacking libisl23:amd64 (0.26-3) ... 797s Selecting previously unselected package libmpc3:amd64. 797s Preparing to unpack .../006-libmpc3_1.3.1-1_amd64.deb ... 797s Unpacking libmpc3:amd64 (1.3.1-1) ... 797s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 797s Preparing to unpack .../007-cpp-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 797s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 797s Selecting previously unselected package cpp-13. 797s Preparing to unpack .../008-cpp-13_13.2.0-17ubuntu2_amd64.deb ... 797s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 797s Selecting previously unselected package cpp-x86-64-linux-gnu. 797s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 797s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 797s Selecting previously unselected package cpp. 797s Preparing to unpack .../010-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 798s Unpacking cpp (4:13.2.0-7ubuntu1) ... 798s Selecting previously unselected package libcc1-0:amd64. 798s Preparing to unpack .../011-libcc1-0_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking libcc1-0:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package libgomp1:amd64. 798s Preparing to unpack .../012-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package libitm1:amd64. 798s Preparing to unpack .../013-libitm1_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking libitm1:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package libatomic1:amd64. 798s Preparing to unpack .../014-libatomic1_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking libatomic1:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package libasan8:amd64. 798s Preparing to unpack .../015-libasan8_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking libasan8:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package liblsan0:amd64. 798s Preparing to unpack .../016-liblsan0_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking liblsan0:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package libtsan2:amd64. 798s Preparing to unpack .../017-libtsan2_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking libtsan2:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package libubsan1:amd64. 798s Preparing to unpack .../018-libubsan1_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking libubsan1:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package libhwasan0:amd64. 798s Preparing to unpack .../019-libhwasan0_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking libhwasan0:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package libquadmath0:amd64. 798s Preparing to unpack .../020-libquadmath0_14-20240303-1ubuntu1_amd64.deb ... 798s Unpacking libquadmath0:amd64 (14-20240303-1ubuntu1) ... 798s Selecting previously unselected package libgcc-13-dev:amd64. 798s Preparing to unpack .../021-libgcc-13-dev_13.2.0-17ubuntu2_amd64.deb ... 798s Unpacking libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 798s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 798s Preparing to unpack .../022-gcc-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 798s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 799s Selecting previously unselected package gcc-13. 799s Preparing to unpack .../023-gcc-13_13.2.0-17ubuntu2_amd64.deb ... 799s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 799s Selecting previously unselected package gcc-x86-64-linux-gnu. 799s Preparing to unpack .../024-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 799s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 799s Selecting previously unselected package gcc. 799s Preparing to unpack .../025-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 799s Unpacking gcc (4:13.2.0-7ubuntu1) ... 799s Selecting previously unselected package libstdc++-13-dev:amd64. 799s Preparing to unpack .../026-libstdc++-13-dev_13.2.0-17ubuntu2_amd64.deb ... 799s Unpacking libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 799s Selecting previously unselected package g++-13-x86-64-linux-gnu. 799s Preparing to unpack .../027-g++-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 799s Unpacking g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 799s Selecting previously unselected package g++-13. 799s Preparing to unpack .../028-g++-13_13.2.0-17ubuntu2_amd64.deb ... 799s Unpacking g++-13 (13.2.0-17ubuntu2) ... 799s Selecting previously unselected package g++-x86-64-linux-gnu. 799s Preparing to unpack .../029-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 799s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 799s Selecting previously unselected package g++. 799s Preparing to unpack .../030-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 799s Unpacking g++ (4:13.2.0-7ubuntu1) ... 799s Selecting previously unselected package build-essential. 799s Preparing to unpack .../031-build-essential_12.10ubuntu1_amd64.deb ... 799s Unpacking build-essential (12.10ubuntu1) ... 799s Selecting previously unselected package dctrl-tools. 799s Preparing to unpack .../032-dctrl-tools_2.24-3build2_amd64.deb ... 799s Unpacking dctrl-tools (2.24-3build2) ... 799s Selecting previously unselected package fonts-dejavu-mono. 799s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ... 799s Unpacking fonts-dejavu-mono (2.37-8) ... 799s Selecting previously unselected package fonts-dejavu-core. 799s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 799s Unpacking fonts-dejavu-core (2.37-8) ... 799s Selecting previously unselected package fontconfig-config. 799s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ... 799s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 800s Selecting previously unselected package libfontconfig1:amd64. 800s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ... 800s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 800s Selecting previously unselected package fontconfig. 800s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_amd64.deb ... 800s Unpacking fontconfig (2.15.0-1ubuntu1) ... 800s Selecting previously unselected package libgfortran5:amd64. 800s Preparing to unpack .../038-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 800s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 800s Selecting previously unselected package libgfortran-13-dev:amd64. 800s Preparing to unpack .../039-libgfortran-13-dev_13.2.0-17ubuntu2_amd64.deb ... 800s Unpacking libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 800s Selecting previously unselected package gfortran-13-x86-64-linux-gnu. 800s Preparing to unpack .../040-gfortran-13-x86-64-linux-gnu_13.2.0-17ubuntu2_amd64.deb ... 800s Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 800s Selecting previously unselected package gfortran-13. 800s Preparing to unpack .../041-gfortran-13_13.2.0-17ubuntu2_amd64.deb ... 800s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 800s Selecting previously unselected package gfortran-x86-64-linux-gnu. 800s Preparing to unpack .../042-gfortran-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 800s Unpacking gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 800s Selecting previously unselected package gfortran. 800s Preparing to unpack .../043-gfortran_4%3a13.2.0-7ubuntu1_amd64.deb ... 800s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 800s Selecting previously unselected package icu-devtools. 800s Preparing to unpack .../044-icu-devtools_74.2-1ubuntu1_amd64.deb ... 800s Unpacking icu-devtools (74.2-1ubuntu1) ... 800s Selecting previously unselected package libblas3:amd64. 800s Preparing to unpack .../045-libblas3_3.12.0-3_amd64.deb ... 800s Unpacking libblas3:amd64 (3.12.0-3) ... 800s Selecting previously unselected package libblas-dev:amd64. 800s Preparing to unpack .../046-libblas-dev_3.12.0-3_amd64.deb ... 800s Unpacking libblas-dev:amd64 (3.12.0-3) ... 800s Selecting previously unselected package libboost1.83-dev:amd64. 800s Preparing to unpack .../047-libboost1.83-dev_1.83.0-2ubuntu1_amd64.deb ... 800s Unpacking libboost1.83-dev:amd64 (1.83.0-2ubuntu1) ... 803s Selecting previously unselected package libboost-dev:amd64. 803s Preparing to unpack .../048-libboost-dev_1.83.0.1ubuntu2_amd64.deb ... 803s Unpacking libboost-dev:amd64 (1.83.0.1ubuntu2) ... 803s Selecting previously unselected package libbz2-dev:amd64. 803s Preparing to unpack .../049-libbz2-dev_1.0.8-5ubuntu1_amd64.deb ... 803s Unpacking libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 803s Selecting previously unselected package libpixman-1-0:amd64. 803s Preparing to unpack .../050-libpixman-1-0_0.42.2-1_amd64.deb ... 803s Unpacking libpixman-1-0:amd64 (0.42.2-1) ... 803s Selecting previously unselected package libxcb-render0:amd64. 803s Preparing to unpack .../051-libxcb-render0_1.15-1_amd64.deb ... 803s Unpacking libxcb-render0:amd64 (1.15-1) ... 803s Selecting previously unselected package libxcb-shm0:amd64. 803s Preparing to unpack .../052-libxcb-shm0_1.15-1_amd64.deb ... 803s Unpacking libxcb-shm0:amd64 (1.15-1) ... 803s Selecting previously unselected package libxrender1:amd64. 803s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1_amd64.deb ... 803s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... 803s Selecting previously unselected package libcairo2:amd64. 803s Preparing to unpack .../054-libcairo2_1.18.0-1_amd64.deb ... 803s Unpacking libcairo2:amd64 (1.18.0-1) ... 803s Selecting previously unselected package libdatrie1:amd64. 803s Preparing to unpack .../055-libdatrie1_0.2.13-3_amd64.deb ... 803s Unpacking libdatrie1:amd64 (0.2.13-3) ... 803s Selecting previously unselected package libdeflate0:amd64. 803s Preparing to unpack .../056-libdeflate0_1.19-1_amd64.deb ... 803s Unpacking libdeflate0:amd64 (1.19-1) ... 803s Selecting previously unselected package libgraphite2-3:amd64. 803s Preparing to unpack .../057-libgraphite2-3_1.3.14-2_amd64.deb ... 803s Unpacking libgraphite2-3:amd64 (1.3.14-2) ... 803s Selecting previously unselected package libharfbuzz0b:amd64. 803s Preparing to unpack .../058-libharfbuzz0b_8.3.0-2_amd64.deb ... 803s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ... 803s Selecting previously unselected package x11-common. 803s Preparing to unpack .../059-x11-common_1%3a7.7+23ubuntu2_all.deb ... 803s Unpacking x11-common (1:7.7+23ubuntu2) ... 803s Selecting previously unselected package libice6:amd64. 803s Preparing to unpack .../060-libice6_2%3a1.0.10-1build2_amd64.deb ... 803s Unpacking libice6:amd64 (2:1.0.10-1build2) ... 803s Selecting previously unselected package libicu-dev:amd64. 803s Preparing to unpack .../061-libicu-dev_74.2-1ubuntu1_amd64.deb ... 803s Unpacking libicu-dev:amd64 (74.2-1ubuntu1) ... 803s Selecting previously unselected package libjpeg-turbo8:amd64. 803s Preparing to unpack .../062-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ... 803s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 803s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 803s Preparing to unpack .../063-libjpeg-turbo8-dev_2.1.5-2ubuntu1_amd64.deb ... 803s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 803s Selecting previously unselected package libjpeg8:amd64. 803s Preparing to unpack .../064-libjpeg8_8c-2ubuntu11_amd64.deb ... 803s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 803s Selecting previously unselected package libjpeg8-dev:amd64. 803s Preparing to unpack .../065-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 803s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 803s Selecting previously unselected package libjpeg-dev:amd64. 803s Preparing to unpack .../066-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 803s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 804s Selecting previously unselected package liblapack3:amd64. 804s Preparing to unpack .../067-liblapack3_3.12.0-3_amd64.deb ... 804s Unpacking liblapack3:amd64 (3.12.0-3) ... 804s Selecting previously unselected package liblapack-dev:amd64. 804s Preparing to unpack .../068-liblapack-dev_3.12.0-3_amd64.deb ... 804s Unpacking liblapack-dev:amd64 (3.12.0-3) ... 804s Selecting previously unselected package liblerc4:amd64. 804s Preparing to unpack .../069-liblerc4_4.0.0+ds-4ubuntu1_amd64.deb ... 804s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 804s Selecting previously unselected package libncurses-dev:amd64. 804s Preparing to unpack .../070-libncurses-dev_6.4+20240113-1ubuntu1_amd64.deb ... 804s Unpacking libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 804s Selecting previously unselected package libthai-data. 804s Preparing to unpack .../071-libthai-data_0.1.29-2_all.deb ... 804s Unpacking libthai-data (0.1.29-2) ... 804s Selecting previously unselected package libthai0:amd64. 804s Preparing to unpack .../072-libthai0_0.1.29-2_amd64.deb ... 804s Unpacking libthai0:amd64 (0.1.29-2) ... 804s Selecting previously unselected package libpango-1.0-0:amd64. 804s Preparing to unpack .../073-libpango-1.0-0_1.51.0+ds-4_amd64.deb ... 804s Unpacking libpango-1.0-0:amd64 (1.51.0+ds-4) ... 804s Selecting previously unselected package libpangoft2-1.0-0:amd64. 804s Preparing to unpack .../074-libpangoft2-1.0-0_1.51.0+ds-4_amd64.deb ... 804s Unpacking libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 804s Selecting previously unselected package libpangocairo-1.0-0:amd64. 804s Preparing to unpack .../075-libpangocairo-1.0-0_1.51.0+ds-4_amd64.deb ... 804s Unpacking libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 804s Selecting previously unselected package libpaper1:amd64. 804s Preparing to unpack .../076-libpaper1_1.1.29_amd64.deb ... 804s Unpacking libpaper1:amd64 (1.1.29) ... 804s Selecting previously unselected package libpaper-utils. 804s Preparing to unpack .../077-libpaper-utils_1.1.29_amd64.deb ... 804s Unpacking libpaper-utils (1.1.29) ... 804s Selecting previously unselected package libpcre2-16-0:amd64. 804s Preparing to unpack .../078-libpcre2-16-0_10.42-4ubuntu1_amd64.deb ... 804s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu1) ... 804s Selecting previously unselected package libpcre2-32-0:amd64. 804s Preparing to unpack .../079-libpcre2-32-0_10.42-4ubuntu1_amd64.deb ... 804s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu1) ... 804s Selecting previously unselected package libpcre2-posix3:amd64. 804s Preparing to unpack .../080-libpcre2-posix3_10.42-4ubuntu1_amd64.deb ... 804s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu1) ... 804s Selecting previously unselected package libpcre2-dev:amd64. 804s Preparing to unpack .../081-libpcre2-dev_10.42-4ubuntu1_amd64.deb ... 804s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu1) ... 804s Selecting previously unselected package libpkgconf3:amd64. 804s Preparing to unpack .../082-libpkgconf3_1.8.1-2_amd64.deb ... 804s Unpacking libpkgconf3:amd64 (1.8.1-2) ... 804s Selecting previously unselected package zlib1g-dev:amd64. 804s Preparing to unpack .../083-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_amd64.deb ... 804s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 804s Selecting previously unselected package libpng-dev:amd64. 804s Preparing to unpack .../084-libpng-dev_1.6.43-1_amd64.deb ... 804s Unpacking libpng-dev:amd64 (1.6.43-1) ... 804s Selecting previously unselected package libreadline-dev:amd64. 804s Preparing to unpack .../085-libreadline-dev_8.2-3_amd64.deb ... 804s Unpacking libreadline-dev:amd64 (8.2-3) ... 804s Selecting previously unselected package libsharpyuv0:amd64. 804s Preparing to unpack .../086-libsharpyuv0_1.3.2-0.4_amd64.deb ... 804s Unpacking libsharpyuv0:amd64 (1.3.2-0.4) ... 804s Selecting previously unselected package libsm6:amd64. 804s Preparing to unpack .../087-libsm6_2%3a1.2.3-1build2_amd64.deb ... 804s Unpacking libsm6:amd64 (2:1.2.3-1build2) ... 804s Selecting previously unselected package libtcl8.6:amd64. 804s Preparing to unpack .../088-libtcl8.6_8.6.13+dfsg-2_amd64.deb ... 804s Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ... 805s Selecting previously unselected package libjbig0:amd64. 805s Preparing to unpack .../089-libjbig0_2.1-6.1ubuntu1_amd64.deb ... 805s Unpacking libjbig0:amd64 (2.1-6.1ubuntu1) ... 805s Selecting previously unselected package libwebp7:amd64. 805s Preparing to unpack .../090-libwebp7_1.3.2-0.4_amd64.deb ... 805s Unpacking libwebp7:amd64 (1.3.2-0.4) ... 805s Selecting previously unselected package libtiff6:amd64. 805s Preparing to unpack .../091-libtiff6_4.5.1+git230720-3ubuntu1_amd64.deb ... 805s Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 805s Selecting previously unselected package libxft2:amd64. 805s Preparing to unpack .../092-libxft2_2.3.6-1_amd64.deb ... 805s Unpacking libxft2:amd64 (2.3.6-1) ... 805s Selecting previously unselected package libxss1:amd64. 805s Preparing to unpack .../093-libxss1_1%3a1.2.3-1build2_amd64.deb ... 805s Unpacking libxss1:amd64 (1:1.2.3-1build2) ... 805s Selecting previously unselected package libtk8.6:amd64. 805s Preparing to unpack .../094-libtk8.6_8.6.14-1_amd64.deb ... 805s Unpacking libtk8.6:amd64 (8.6.14-1) ... 805s Selecting previously unselected package libxt6:amd64. 805s Preparing to unpack .../095-libxt6_1%3a1.2.1-1.1_amd64.deb ... 805s Unpacking libxt6:amd64 (1:1.2.1-1.1) ... 805s Selecting previously unselected package zip. 805s Preparing to unpack .../096-zip_3.0-13_amd64.deb ... 805s Unpacking zip (3.0-13) ... 805s Selecting previously unselected package unzip. 805s Preparing to unpack .../097-unzip_6.0-28ubuntu3_amd64.deb ... 805s Unpacking unzip (6.0-28ubuntu3) ... 805s Selecting previously unselected package xdg-utils. 805s Preparing to unpack .../098-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 805s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 805s Selecting previously unselected package r-base-core. 805s Preparing to unpack .../099-r-base-core_4.3.2-1build1_amd64.deb ... 805s Unpacking r-base-core (4.3.2-1build1) ... 805s Selecting previously unselected package r-cran-littler. 805s Preparing to unpack .../100-r-cran-littler_0.3.19-1_amd64.deb ... 805s Unpacking r-cran-littler (0.3.19-1) ... 805s Selecting previously unselected package littler. 805s Preparing to unpack .../101-littler_0.3.19-1_all.deb ... 805s Unpacking littler (0.3.19-1) ... 805s Selecting previously unselected package pkgconf-bin. 805s Preparing to unpack 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previously unselected package r-bioc-biocgenerics. 806s Preparing to unpack .../108-r-bioc-biocgenerics_0.48.1-2_all.deb ... 806s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 806s Selecting previously unselected package r-cran-formatr. 806s Preparing to unpack .../109-r-cran-formatr_1.14-1_all.deb ... 806s Unpacking r-cran-formatr (1.14-1) ... 806s Selecting previously unselected package r-cran-lambda.r. 806s Preparing to unpack .../110-r-cran-lambda.r_1.2.4-2build1_all.deb ... 806s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 806s Selecting previously unselected package r-cran-futile.options. 806s Preparing to unpack .../111-r-cran-futile.options_1.0.1-3build1_all.deb ... 806s Unpacking r-cran-futile.options (1.0.1-3build1) ... 806s Selecting previously unselected package r-cran-futile.logger. 806s Preparing to unpack .../112-r-cran-futile.logger_1.4.3-4build1_all.deb ... 806s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 806s Selecting previously unselected package r-cran-snow. 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previously unselected package r-cran-nlme. 808s Preparing to unpack .../146-r-cran-nlme_3.1.164-1_amd64.deb ... 808s Unpacking r-cran-nlme (3.1.164-1) ... 808s Selecting previously unselected package r-cran-matrix. 808s Preparing to unpack .../147-r-cran-matrix_1.6-5-1_amd64.deb ... 808s Unpacking r-cran-matrix (1.6-5-1) ... 808s Selecting previously unselected package r-cran-mgcv. 808s Preparing to unpack .../148-r-cran-mgcv_1.9-1-1_amd64.deb ... 808s Unpacking r-cran-mgcv (1.9-1-1) ... 808s Selecting previously unselected package r-cran-labeling. 808s Preparing to unpack .../149-r-cran-labeling_0.4.3-1_all.deb ... 808s Unpacking r-cran-labeling (0.4.3-1) ... 808s Selecting previously unselected package r-cran-munsell. 808s Preparing to unpack .../150-r-cran-munsell_0.5.0-2build1_all.deb ... 808s Unpacking r-cran-munsell (0.5.0-2build1) ... 808s Selecting previously unselected package r-cran-r6. 808s Preparing to unpack .../151-r-cran-r6_2.5.1-1_all.deb ... 808s Unpacking r-cran-r6 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Setting up libc-dev-bin (2.39-0ubuntu6) ... 810s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 810s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 810s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ... 810s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ... 810s Setting up libblas-dev:amd64 (3.12.0-3) ... 810s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 810s Setting up dctrl-tools (2.24-3build2) ... 810s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ... 810s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 810s Setting up libice6:amd64 (2:1.0.10-1build2) ... 810s Setting up liblapack3:amd64 (3.12.0-3) ... 810s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 810s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 810s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 810s Setting up pkgconf:amd64 (1.8.1-2) ... 810s Setting up libthai0:amd64 (0.1.29-2) ... 810s Setting up liblapack-dev:amd64 (3.12.0-3) ... 810s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 810s Setting up pkg-config:amd64 (1.8.1-2) ... 810s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ... 810s Setting up libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 810s Setting up libc6-dev:amd64 (2.39-0ubuntu6) ... 810s Setting up libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 810s Setting up libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ... 810s Setting up libsm6:amd64 (2:1.2.3-1build2) ... 810s Setting up libicu-dev:amd64 (74.2-1ubuntu1) ... 810s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ... 810s Setting up libbz2-dev:amd64 (1.0.8-5ubuntu1) ... 810s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 810s Setting up fontconfig (2.15.0-1ubuntu1) ... 812s Regenerating fonts cache... done. 812s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ... 812s Setting up libxft2:amd64 (2.3.6-1) ... 812s Setting up libboost1.83-dev:amd64 (1.83.0-2ubuntu1) ... 812s Setting up libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ... 812s Setting up libpcre2-dev:amd64 (10.42-4ubuntu1) ... 812s Setting up cpp-13 (13.2.0-17ubuntu2) ... 812s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 812s Setting up libtk8.6:amd64 (8.6.14-1) ... 812s Setting up libpango-1.0-0:amd64 (1.51.0+ds-4) ... 812s Setting up libreadline-dev:amd64 (8.2-3) ... 812s Setting up gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 812s Setting up libcairo2:amd64 (1.18.0-1) ... 812s Setting up gcc-13 (13.2.0-17ubuntu2) ... 812s Setting up libxt6:amd64 (1:1.2.1-1.1) ... 812s Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ... 812s Setting up cpp (4:13.2.0-7ubuntu1) ... 812s Setting up libboost-dev:amd64 (1.83.0.1ubuntu2) ... 812s Setting up libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ... 812s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 812s Setting up libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ... 812s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ... 812s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 812s Setting up libpng-dev:amd64 (1.6.43-1) ... 812s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 812s Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 812s Setting up gcc (4:13.2.0-7ubuntu1) ... 812s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 812s Setting up r-base-core (4.3.2-1build1) ... 812s 812s Creating config file /etc/R/Renviron with new version 812s Setting up r-cran-crayon (1.5.2-1) ... 812s Setting up r-cran-labeling (0.4.3-1) ... 812s Setting up r-cran-futile.options (1.0.1-3build1) ... 812s Setting up r-cran-lattice (0.22-5-1) ... 812s Setting up r-cran-nlme (3.1.164-1) ... 812s Setting up r-cran-farver (2.1.1-1) ... 812s Setting up r-cran-formatr (1.14-1) ... 812s Setting up r-cran-viridislite (0.4.2-2) ... 812s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 812s Setting up r-cran-r6 (2.5.1-1) ... 812s Setting up r-cran-pkgkitten (0.2.3-1) ... 812s Setting up r-cran-magrittr (2.0.3-1) ... 812s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 812s Setting up r-cran-littler (0.3.19-1) ... 812s Setting up r-cran-bh (1.84.0-1) ... 812s Setting up r-cran-rcpp (1.0.12-1) ... 812s Setting up r-cran-codetools (0.2-19-1) ... 812s Setting up g++-13 (13.2.0-17ubuntu2) ... 812s Setting up r-bioc-biocgenerics (0.48.1-2) ... 812s Setting up r-cran-rlang (1.1.3-1) ... 812s Setting up littler (0.3.19-1) ... 812s Setting up r-cran-withr (2.5.0-1) ... 812s Setting up r-cran-lambda.r (1.2.4-2build1) ... 812s Setting up r-cran-fansi (1.0.5-1) ... 812s Setting up r-cran-mass (7.3-60.0.1-1) ... 812s Setting up r-cran-snow (1:0.4.4-2) ... 812s Setting up r-cran-gtools (3.9.5-1) ... 812s Setting up r-cran-data.table (1.14.10+dfsg-1) ... 812s Setting up r-cran-glue (1.7.0-1) ... 812s Setting up r-cran-cli (3.6.2-1) ... 812s Setting up gfortran (4:13.2.0-7ubuntu1) ... 812s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 812s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 812s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 812s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 812s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 812s Setting up r-cran-bitops (1.0-7-1) ... 812s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 812s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 812s Setting up r-cran-utf8 (1.2.4-1) ... 812s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 812s Setting up r-cran-cpp11 (0.4.7-1) ... 812s Setting up r-cran-plyr (1.8.9-1) ... 812s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 812s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 812s Setting up r-cran-isoband (0.2.7-1) ... 812s Setting up r-cran-futile.logger (1.4.3-4build1) ... 812s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 812s Setting up r-cran-matrix (1.6-5-1) ... 812s Setting up r-cran-kernsmooth (2.23-22-1) ... 812s Setting up r-cran-mgcv (1.9-1-1) ... 812s Setting up g++ (4:13.2.0-7ubuntu1) ... 812s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 812s Setting up build-essential (12.10ubuntu1) ... 812s Setting up r-cran-catools (1.18.2-1) ... 812s Setting up r-bioc-iranges (2.36.0-1) ... 812s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 812s Setting up r-cran-gdata (3.0.0-1) ... 812s Setting up r-cran-vctrs (0.6.5-1) ... 812s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 812s Setting up r-base-dev (4.3.2-1build1) ... 812s Setting up r-bioc-biocparallel (1.36.0-1) ... 812s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 812s Setting up r-cran-munsell (0.5.0-2build1) ... 812s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 812s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 812s Setting up r-cran-gridextra (2.3-3build1) ... 812s Setting up r-cran-scales (1.3.0-1) ... 812s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 812s Setting up r-bioc-xvector (0.42.0-1) ... 812s Setting up r-cran-gplots (3.1.3.1-1) ... 812s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 812s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 812s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 812s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 812s Setting up r-other-rajewsky-dropbead (0.3.1+git20180221.d746c6f+ds-3) ... 812s Setting up autopkgtest-satdep (0) ... 812s Processing triggers for man-db (2.12.0-3) ... 814s Processing triggers for install-info (7.1-3) ... 814s Processing triggers for libc-bin (2.39-0ubuntu6) ... 821s (Reading database ... 99952 files and directories currently installed.) 821s Removing autopkgtest-satdep (0) ... 821s autopkgtest [07:30:38]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 821s autopkgtest [07:30:38]: test pkg-r-autopkgtest: [----------------------- 821s Test: Try to load the R library dropbead 821s 821s R version 4.3.2 (2023-10-31) -- "Eye Holes" 821s Copyright (C) 2023 The R Foundation for Statistical Computing 821s Platform: x86_64-pc-linux-gnu (64-bit) 821s 821s R is free software and comes with ABSOLUTELY NO WARRANTY. 821s You are welcome to redistribute it under certain conditions. 821s Type 'license()' or 'licence()' for distribution details. 821s 821s R is a collaborative project with many contributors. 821s Type 'contributors()' for more information and 821s 'citation()' on how to cite R or R packages in publications. 821s 821s Type 'demo()' for some demos, 'help()' for on-line help, or 821s 'help.start()' for an HTML browser interface to help. 821s Type 'q()' to quit R. 821s 821s > library('dropbead') 821s Loading required package: ggplot2 821s Loading required package: grid 821s Loading required package: RColorBrewer 821s Loading required package: gridExtra 821s Loading required package: gplots 822s 822s Attaching package: ‘gplots’ 822s 822s The following object is masked from ‘package:stats’: 822s 822s lowess 822s 822s Loading required package: plyr 822s > 822s > 822s Other tests are currently unsupported! 822s They will be progressively added. 822s autopkgtest [07:30:39]: test pkg-r-autopkgtest: -----------------------] 822s autopkgtest [07:30:39]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 822s pkg-r-autopkgtest PASS 822s autopkgtest [07:30:39]: @@@@@@@@@@@@@@@@@@@@ summary 822s pkg-r-autopkgtest PASS 839s Creating nova instance adt-noble-amd64-r-other-rajewsky-dropbead-20240325-071656-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240325.img (UUID ba43860b-557a-4db2-b3f0-378a99bca08c)...