0s autopkgtest [02:36:38]: starting date and time: 2024-03-25 02:36:38+0000
  0s autopkgtest [02:36:38]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps
  0s autopkgtest [02:36:38]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.vp0jk5yr/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed --apt-upgrade r-cran-g.data --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-37.secgroup --name adt-noble-amd64-r-cran-g.data-20240325-023638-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
935s autopkgtest [02:52:13]: testbed dpkg architecture: amd64
935s autopkgtest [02:52:13]: testbed apt version: 2.7.12
935s autopkgtest [02:52:13]: @@@@@@@@@@@@@@@@@@@@ test bed setup
935s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
936s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB]
936s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [4046 kB]
936s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.8 kB]
936s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
936s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [726 kB]
936s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [488 kB]
936s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B]
936s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB]
936s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B]
936s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B]
936s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1298 kB]
936s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4421 kB]
936s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B]
936s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [97.5 kB]
936s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [29.6 kB]
936s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B]
939s Fetched 11.8 MB in 1s (8206 kB/s)
939s Reading package lists...
941s Reading package lists...
941s Building dependency tree...
941s Reading state information...
941s Calculating upgrade...
942s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
942s Reading package lists...
942s Building dependency tree...
942s Reading state information...
943s 0 upgraded, 0 newly installed, 0 to remove and 248 not upgraded.
943s sh: Attempting to set up Debian/Ubuntu apt sources automatically
943s sh: Distribution appears to be Ubuntu
944s Reading package lists...
944s Building dependency tree...
944s Reading state information...
945s eatmydata is already the newest version (131-1).
945s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
945s Reading package lists...
945s Building dependency tree...
945s Reading state information...
946s dbus is already the newest version (1.14.10-4ubuntu1).
946s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
946s Reading package lists...
946s Building dependency tree...
946s Reading state information...
946s rng-tools-debian is already the newest version (2.4).
946s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
946s Reading package lists...
946s Building dependency tree...
946s Reading state information...
947s The following packages will be REMOVED:
947s   cloud-init* python3-configobj* python3-debconf*
947s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
947s After this operation, 3256 kB disk space will be freed.
947s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71864 files and directories currently installed.)
947s Removing cloud-init (24.1.2-0ubuntu1) ...
948s Removing python3-configobj (5.0.8-3) ...
948s Removing python3-debconf (1.5.86) ...
948s Processing triggers for man-db (2.12.0-3) ...
948s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71475 files and directories currently installed.)
948s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ...
949s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
949s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
949s invoke-rc.d: policy-rc.d denied execution of try-restart.
949s Reading package lists...
950s Building dependency tree...
950s Reading state information...
950s linux-generic is already the newest version (6.8.0-11.11+1).
950s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
951s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
951s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
951s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
952s Reading package lists...
952s Reading package lists...
953s Building dependency tree...
953s Reading state information...
953s Calculating upgrade...
953s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
953s Reading package lists...
954s Building dependency tree...
954s Reading state information...
954s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
954s autopkgtest [02:52:32]: rebooting testbed after setup commands that affected boot
992s autopkgtest [02:53:10]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024
993s autopkgtest [02:53:11]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-g.data
993s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-g.data 2.4.1-1 (dsc) [2092 B]
993s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-g.data 2.4.1-1 (tar) [118 kB]
993s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-g.data 2.4.1-1 (diff) [3152 B]
994s gpgv: Signature made Thu Feb  1 15:44:23 2024 UTC
994s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
994s gpgv:                issuer "tille@debian.org"
994s gpgv: Can't check signature: No public key
994s dpkg-source: warning: cannot verify inline signature for ./r-cran-g.data_2.4.1-1.dsc: no acceptable signature found
994s autopkgtest [02:53:12]: testing package r-cran-g.data version 2.4.1-1
994s autopkgtest [02:53:12]: build not needed
996s autopkgtest [02:53:14]: test run-unit-test: preparing testbed
999s Reading package lists...
999s Building dependency tree...
999s Reading state information...
999s Starting pkgProblemResolver with broken count: 0
999s Starting 2 pkgProblemResolver with broken count: 0
999s Done
1000s The following additional packages will be installed:
1000s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
1000s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1
1000s   libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8
1000s   liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
1000s   libpaper-utils libpaper1 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
1000s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
1000s   libxft2 libxrender1 libxss1 libxt6 r-base-core r-cran-g.data unzip
1000s   x11-common xdg-utils zip
1000s Suggested packages:
1000s   tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html
1000s Recommended packages:
1000s   r-recommended r-base-dev r-doc-html libfile-mimeinfo-perl libnet-dbus-perl
1000s   libx11-protocol-perl x11-utils x11-xserver-utils
1000s The following NEW packages will be installed:
1000s   autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core
1000s   fonts-dejavu-mono libblas3 libcairo2 libdatrie1 libdeflate0 libfontconfig1
1000s   libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0
1000s   libjpeg-turbo8 libjpeg8 liblapack3 liblerc4 libpango-1.0-0
1000s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0
1000s   libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6
1000s   libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6
1000s   r-base-core r-cran-g.data unzip x11-common xdg-utils zip
1000s 0 upgraded, 46 newly installed, 0 to remove and 0 not upgraded.
1000s Need to get 38.1 MB/38.1 MB of archives.
1000s After this operation, 77.7 MB of additional disk space will be used.
1000s Get:1 /tmp/autopkgtest.dKMco3/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [708 B]
1000s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB]
1000s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB]
1000s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB]
1000s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB]
1000s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig amd64 2.15.0-1ubuntu1 [180 kB]
1000s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB]
1000s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB]
1000s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-render0 amd64 1.15-1 [16.3 kB]
1000s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B]
1000s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB]
1000s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 libcairo2 amd64 1.18.0-1 [572 kB]
1000s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 libdatrie1 amd64 0.2.13-3 [20.9 kB]
1000s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB]
1000s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB]
1000s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB]
1000s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB]
1000s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB]
1000s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
1000s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB]
1000s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB]
1000s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B]
1000s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB]
1000s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB]
1000s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 libthai-data all 0.1.29-2 [158 kB]
1000s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 libthai0 amd64 0.1.29-2 [18.8 kB]
1000s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 libpango-1.0-0 amd64 1.51.0+ds-4 [228 kB]
1000s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 libpangoft2-1.0-0 amd64 1.51.0+ds-4 [42.1 kB]
1000s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 libpangocairo-1.0-0 amd64 1.51.0+ds-4 [29.0 kB]
1000s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper1 amd64 1.1.29 [13.4 kB]
1000s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 libpaper-utils amd64 1.1.29 [8658 B]
1000s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB]
1000s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB]
1000s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB]
1000s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB]
1000s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB]
1000s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB]
1000s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB]
1000s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B]
1000s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.14-1 [779 kB]
1000s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB]
1000s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 zip amd64 3.0-13 [176 kB]
1000s Get:43 http://ftpmaster.internal/ubuntu noble/main amd64 unzip amd64 6.0-28ubuntu3 [174 kB]
1000s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
1000s Get:45 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-core amd64 4.3.2-1build1 [27.0 MB]
1000s Get:46 http://ftpmaster.internal/ubuntu noble/universe amd64 r-cran-g.data all 2.4.1-1 [132 kB]
1000s Preconfiguring packages ...
1000s Fetched 38.1 MB in 0s (105 MB/s)
1001s Selecting previously unselected package fonts-dejavu-mono.
1001s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71420 files and directories currently installed.)
1001s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
1001s Unpacking fonts-dejavu-mono (2.37-8) ...
1001s Selecting previously unselected package fonts-dejavu-core.
1001s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ...
1001s Unpacking fonts-dejavu-core (2.37-8) ...
1001s Selecting previously unselected package fontconfig-config.
1001s Preparing to unpack .../02-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ...
1001s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
1001s Selecting previously unselected package libfontconfig1:amd64.
1001s Preparing to unpack .../03-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ...
1001s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ...
1001s Selecting previously unselected package fontconfig.
1001s Preparing to unpack .../04-fontconfig_2.15.0-1ubuntu1_amd64.deb ...
1001s Unpacking fontconfig (2.15.0-1ubuntu1) ...
1001s Selecting previously unselected package libblas3:amd64.
1001s Preparing to unpack .../05-libblas3_3.12.0-3_amd64.deb ...
1001s Unpacking libblas3:amd64 (3.12.0-3) ...
1001s Selecting previously unselected package libpixman-1-0:amd64.
1001s Preparing to unpack .../06-libpixman-1-0_0.42.2-1_amd64.deb ...
1001s Unpacking libpixman-1-0:amd64 (0.42.2-1) ...
1001s Selecting previously unselected package libxcb-render0:amd64.
1001s Preparing to unpack .../07-libxcb-render0_1.15-1_amd64.deb ...
1001s Unpacking libxcb-render0:amd64 (1.15-1) ...
1001s Selecting previously unselected package libxcb-shm0:amd64.
1001s Preparing to unpack .../08-libxcb-shm0_1.15-1_amd64.deb ...
1001s Unpacking libxcb-shm0:amd64 (1.15-1) ...
1001s Selecting previously unselected package libxrender1:amd64.
1001s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1_amd64.deb ...
1001s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ...
1001s Selecting previously unselected package libcairo2:amd64.
1001s Preparing to unpack .../10-libcairo2_1.18.0-1_amd64.deb ...
1001s Unpacking libcairo2:amd64 (1.18.0-1) ...
1001s Selecting previously unselected package libdatrie1:amd64.
1001s Preparing to unpack .../11-libdatrie1_0.2.13-3_amd64.deb ...
1001s Unpacking libdatrie1:amd64 (0.2.13-3) ...
1001s Selecting previously unselected package libdeflate0:amd64.
1001s Preparing to unpack .../12-libdeflate0_1.19-1_amd64.deb ...
1001s Unpacking libdeflate0:amd64 (1.19-1) ...
1001s Selecting previously unselected package libgfortran5:amd64.
1001s Preparing to unpack .../13-libgfortran5_14-20240303-1ubuntu1_amd64.deb ...
1001s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ...
1001s Selecting previously unselected package libgomp1:amd64.
1001s Preparing to unpack .../14-libgomp1_14-20240303-1ubuntu1_amd64.deb ...
1001s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ...
1001s Selecting previously unselected package libgraphite2-3:amd64.
1001s Preparing to unpack .../15-libgraphite2-3_1.3.14-2_amd64.deb ...
1001s Unpacking libgraphite2-3:amd64 (1.3.14-2) ...
1001s Selecting previously unselected package libharfbuzz0b:amd64.
1001s Preparing to unpack .../16-libharfbuzz0b_8.3.0-2_amd64.deb ...
1001s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ...
1001s Selecting previously unselected package x11-common.
1001s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu2_all.deb ...
1001s Unpacking x11-common (1:7.7+23ubuntu2) ...
1001s Selecting previously unselected package libice6:amd64.
1001s Preparing to unpack .../18-libice6_2%3a1.0.10-1build2_amd64.deb ...
1001s Unpacking libice6:amd64 (2:1.0.10-1build2) ...
1001s Selecting previously unselected package libjpeg-turbo8:amd64.
1001s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ...
1001s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ...
1001s Selecting previously unselected package libjpeg8:amd64.
1001s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_amd64.deb ...
1001s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ...
1001s Selecting previously unselected package liblapack3:amd64.
1001s Preparing to unpack .../21-liblapack3_3.12.0-3_amd64.deb ...
1001s Unpacking liblapack3:amd64 (3.12.0-3) ...
1002s Selecting previously unselected package liblerc4:amd64.
1002s Preparing to unpack .../22-liblerc4_4.0.0+ds-4ubuntu1_amd64.deb ...
1002s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu1) ...
1002s Selecting previously unselected package libthai-data.
1002s Preparing to unpack .../23-libthai-data_0.1.29-2_all.deb ...
1002s Unpacking libthai-data (0.1.29-2) ...
1002s Selecting previously unselected package libthai0:amd64.
1002s Preparing to unpack .../24-libthai0_0.1.29-2_amd64.deb ...
1002s Unpacking libthai0:amd64 (0.1.29-2) ...
1002s Selecting previously unselected package libpango-1.0-0:amd64.
1002s Preparing to unpack .../25-libpango-1.0-0_1.51.0+ds-4_amd64.deb ...
1002s Unpacking libpango-1.0-0:amd64 (1.51.0+ds-4) ...
1002s Selecting previously unselected package libpangoft2-1.0-0:amd64.
1002s Preparing to unpack .../26-libpangoft2-1.0-0_1.51.0+ds-4_amd64.deb ...
1002s Unpacking libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ...
1002s Selecting previously unselected package libpangocairo-1.0-0:amd64.
1002s Preparing to unpack .../27-libpangocairo-1.0-0_1.51.0+ds-4_amd64.deb ...
1002s Unpacking libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ...
1002s Selecting previously unselected package libpaper1:amd64.
1002s Preparing to unpack .../28-libpaper1_1.1.29_amd64.deb ...
1002s Unpacking libpaper1:amd64 (1.1.29) ...
1002s Selecting previously unselected package libpaper-utils.
1002s Preparing to unpack .../29-libpaper-utils_1.1.29_amd64.deb ...
1002s Unpacking libpaper-utils (1.1.29) ...
1002s Selecting previously unselected package libsharpyuv0:amd64.
1002s Preparing to unpack .../30-libsharpyuv0_1.3.2-0.4_amd64.deb ...
1002s Unpacking libsharpyuv0:amd64 (1.3.2-0.4) ...
1002s Selecting previously unselected package libsm6:amd64.
1002s Preparing to unpack .../31-libsm6_2%3a1.2.3-1build2_amd64.deb ...
1002s Unpacking libsm6:amd64 (2:1.2.3-1build2) ...
1002s Selecting previously unselected package libtcl8.6:amd64.
1002s Preparing to unpack .../32-libtcl8.6_8.6.13+dfsg-2_amd64.deb ...
1002s Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ...
1002s Selecting previously unselected package libjbig0:amd64.
1002s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu1_amd64.deb ...
1002s Unpacking libjbig0:amd64 (2.1-6.1ubuntu1) ...
1002s Selecting previously unselected package libwebp7:amd64.
1002s Preparing to unpack .../34-libwebp7_1.3.2-0.4_amd64.deb ...
1002s Unpacking libwebp7:amd64 (1.3.2-0.4) ...
1002s Selecting previously unselected package libtiff6:amd64.
1002s Preparing to unpack .../35-libtiff6_4.5.1+git230720-3ubuntu1_amd64.deb ...
1002s Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ...
1002s Selecting previously unselected package libxft2:amd64.
1002s Preparing to unpack .../36-libxft2_2.3.6-1_amd64.deb ...
1002s Unpacking libxft2:amd64 (2.3.6-1) ...
1002s Selecting previously unselected package libxss1:amd64.
1002s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build2_amd64.deb ...
1002s Unpacking libxss1:amd64 (1:1.2.3-1build2) ...
1002s Selecting previously unselected package libtk8.6:amd64.
1002s Preparing to unpack .../38-libtk8.6_8.6.14-1_amd64.deb ...
1002s Unpacking libtk8.6:amd64 (8.6.14-1) ...
1002s Selecting previously unselected package libxt6:amd64.
1002s Preparing to unpack .../39-libxt6_1%3a1.2.1-1.1_amd64.deb ...
1002s Unpacking libxt6:amd64 (1:1.2.1-1.1) ...
1002s Selecting previously unselected package zip.
1002s Preparing to unpack .../40-zip_3.0-13_amd64.deb ...
1002s Unpacking zip (3.0-13) ...
1002s Selecting previously unselected package unzip.
1002s Preparing to unpack .../41-unzip_6.0-28ubuntu3_amd64.deb ...
1002s Unpacking unzip (6.0-28ubuntu3) ...
1002s Selecting previously unselected package xdg-utils.
1002s Preparing to unpack .../42-xdg-utils_1.1.3-4.1ubuntu3_all.deb ...
1002s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ...
1002s Selecting previously unselected package r-base-core.
1002s Preparing to unpack .../43-r-base-core_4.3.2-1build1_amd64.deb ...
1002s Unpacking r-base-core (4.3.2-1build1) ...
1002s Selecting previously unselected package r-cran-g.data.
1002s Preparing to unpack .../44-r-cran-g.data_2.4.1-1_all.deb ...
1002s Unpacking r-cran-g.data (2.4.1-1) ...
1002s Selecting previously unselected package autopkgtest-satdep.
1002s Preparing to unpack .../45-1-autopkgtest-satdep.deb ...
1002s Unpacking autopkgtest-satdep (0) ...
1002s Setting up libgraphite2-3:amd64 (1.3.14-2) ...
1002s Setting up libpixman-1-0:amd64 (0.42.2-1) ...
1002s Setting up libsharpyuv0:amd64 (1.3.2-0.4) ...
1002s Setting up libpaper1:amd64 (1.1.29) ...
1003s 
1003s Creating config file /etc/papersize with new version
1003s Setting up liblerc4:amd64 (4.0.0+ds-4ubuntu1) ...
1003s Setting up libxrender1:amd64 (1:0.9.10-1.1) ...
1003s Setting up libdatrie1:amd64 (0.2.13-3) ...
1003s Setting up libxcb-render0:amd64 (1.15-1) ...
1003s Setting up unzip (6.0-28ubuntu3) ...
1003s Setting up x11-common (1:7.7+23ubuntu2) ...
1003s Setting up libdeflate0:amd64 (1.19-1) ...
1003s Setting up libxcb-shm0:amd64 (1.15-1) ...
1003s Setting up libpaper-utils (1.1.29) ...
1003s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ...
1003s Setting up libjbig0:amd64 (2.1-6.1ubuntu1) ...
1003s Setting up zip (3.0-13) ...
1003s Setting up libblas3:amd64 (3.12.0-3) ...
1003s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
1003s Setting up fonts-dejavu-mono (2.37-8) ...
1003s Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ...
1003s Setting up fonts-dejavu-core (2.37-8) ...
1003s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ...
1003s Setting up libgfortran5:amd64 (14-20240303-1ubuntu1) ...
1003s Setting up libwebp7:amd64 (1.3.2-0.4) ...
1003s Setting up libharfbuzz0b:amd64 (8.3.0-2) ...
1003s Setting up libthai-data (0.1.29-2) ...
1003s Setting up libxss1:amd64 (1:1.2.3-1build2) ...
1003s Setting up xdg-utils (1.1.3-4.1ubuntu3) ...
1003s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
1003s Setting up libjpeg8:amd64 (8c-2ubuntu11) ...
1003s Setting up libice6:amd64 (2:1.0.10-1build2) ...
1003s Setting up liblapack3:amd64 (3.12.0-3) ...
1003s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
1003s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
1003s Setting up libthai0:amd64 (0.1.29-2) ...
1003s Setting up libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ...
1003s Setting up libfontconfig1:amd64 (2.15.0-1ubuntu1) ...
1003s Setting up libsm6:amd64 (2:1.2.3-1build2) ...
1003s Setting up fontconfig (2.15.0-1ubuntu1) ...
1005s Regenerating fonts cache... done.
1005s Setting up libxft2:amd64 (2.3.6-1) ...
1005s Setting up libtk8.6:amd64 (8.6.14-1) ...
1005s Setting up libpango-1.0-0:amd64 (1.51.0+ds-4) ...
1005s Setting up libcairo2:amd64 (1.18.0-1) ...
1005s Setting up libxt6:amd64 (1:1.2.1-1.1) ...
1005s Setting up libpangoft2-1.0-0:amd64 (1.51.0+ds-4) ...
1005s Setting up libpangocairo-1.0-0:amd64 (1.51.0+ds-4) ...
1005s Setting up r-base-core (4.3.2-1build1) ...
1006s 
1006s Creating config file /etc/R/Renviron with new version
1006s Setting up r-cran-g.data (2.4.1-1) ...
1006s Setting up autopkgtest-satdep (0) ...
1006s Processing triggers for man-db (2.12.0-3) ...
1007s Processing triggers for install-info (7.1-3) ...
1007s Processing triggers for libc-bin (2.39-0ubuntu6) ...
1009s (Reading database ... 73490 files and directories currently installed.)
1009s Removing autopkgtest-satdep (0) ...
1009s autopkgtest [02:53:27]: test run-unit-test: [-----------------------
1009s 
1009s R version 4.3.2 (2023-10-31) -- "Eye Holes"
1009s Copyright (C) 2023 The R Foundation for Statistical Computing
1009s Platform: x86_64-pc-linux-gnu (64-bit)
1009s 
1009s R is free software and comes with ABSOLUTELY NO WARRANTY.
1009s You are welcome to redistribute it under certain conditions.
1009s Type 'license()' or 'licence()' for distribution details.
1009s 
1009s R is a collaborative project with many contributors.
1009s Type 'contributors()' for more information and
1009s 'citation()' on how to cite R or R packages in publications.
1009s 
1009s Type 'demo()' for some demos, 'help()' for on-line help, or
1009s 'help.start()' for an HTML browser interface to help.
1009s Type 'q()' to quit R.
1009s 
1009s >   Stangle("g.data.Rnw")
1009s Writing to file g.data.R 
1009s >   source("g.data.R", echo=TRUE)
1009s 
1009s > options(width = 80, digits = 4, scipen = 5)
1009s 
1009s > if ("package:g.data" %in% search()) detach("package:g.data")
1009s 
1009s > require(g.data)
1009s Loading required package: g.data
1009s 
1009s > (ddp <- tempfile("newdir"))
1009s [1] "/tmp/RtmpsHyW6j/newdir903496226d7"
1009s 
1009s > g.data.attach(ddp)
1009s 
1009s > search()[1:3]
1009s [1] ".GlobalEnv"        "newdir903496226d7" "package:g.data"   
1009s 
1009s > assign("m1", matrix(1, 5000, 1000), 2)
1009s 
1009s > assign("m2", matrix(2, 5000, 1000), 2)
1009s 
1009s > ls(2)
1009s [1] "m1" "m2"
1009s 
1009s > g.data.save()
1010s 
1010s > detach(2)
1010s 
1010s > g.data.attach(ddp)
1010s 
1010s > ls(2)
1010s [1] "m1" "m2"
1010s 
1010s > system.time(print(dim(m1)))
1010s [1] 5000 1000
1010s    user  system elapsed 
1010s   0.081   0.004   0.085 
1010s 
1010s > system.time(print(dim(m1)))
1010s [1] 5000 1000
1010s    user  system elapsed 
1010s       0       0       0 
1010s 
1010s > find("m1")
1010s [1] "newdir903496226d7"
1010s 
1010s > assign("m3", m1 * 10, 2)
1010s 
1010s > g.data.save()
1011s 
1011s > detach(2)
1011s 
1011s > mym2 <- g.data.get("m2", ddp)
1011s 
1011s > g.data.put("m4", matrix(1:12, 3, 4), ddp)
1011s 
1011s > unlink(ddp, recursive = TRUE)
1011s 
1011s > ddp <- tempfile("newdir")
1011s 
1011s > y <- list(m1 = 1:1000, m2 = 2:1001)
1011s 
1011s > attach(y)
1011s 
1011s > search()[1:3]
1011s [1] ".GlobalEnv"     "y"              "package:g.data"
1011s 
1011s > ls(2)
1011s [1] "m1" "m2"
1011s 
1011s > g.data.save(ddp)
1011s 
1011s > detach(2)
1011s 
1011s > unlink(ddp, recursive = TRUE)
1011s Warning message:
1011s In g.data.attach(ddp) : New DDP: /tmp/RtmpsHyW6j/newdir903496226d7
1011s > 
1012s autopkgtest [02:53:29]: test run-unit-test: -----------------------]
1012s autopkgtest [02:53:30]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
1012s run-unit-test        PASS
1012s autopkgtest [02:53:30]: test pkg-r-autopkgtest: preparing testbed
1015s Reading package lists...
1015s Building dependency tree...
1015s Reading state information...
1015s Starting pkgProblemResolver with broken count: 0
1015s Starting 2 pkgProblemResolver with broken count: 0
1015s Done
1015s The following additional packages will be installed:
1015s   build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu
1015s   dctrl-tools g++ g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc
1015s   gcc-13 gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-13
1015s   gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libasan8
1015s   libatomic1 libblas-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0
1015s   libcrypt-dev libgcc-13-dev libgfortran-13-dev libhwasan0 libicu-dev libisl23
1015s   libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0
1015s   liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev
1015s   libpcre2-posix3 libpkgconf3 libpng-dev libquadmath0 libreadline-dev
1015s   libstdc++-13-dev libtsan2 libubsan1 linux-libc-dev pkg-config
1015s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev
1015s Suggested packages:
1015s   cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib
1015s   gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison
1015s   gdb gcc-doc gcc-13-multilib gdb-x86-64-linux-gnu gfortran-multilib
1015s   gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev
1015s   liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc
1015s   libstdc++-13-doc texlive-base texlive-latex-base texlive-plain-generic
1015s   texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
1015s   texlive-latex-recommended texlive-latex-extra texinfo
1015s Recommended packages:
1015s   bzip2-doc manpages manpages-dev libc-devtools libpng-tools
1015s The following NEW packages will be installed:
1015s   autopkgtest-satdep build-essential cpp cpp-13 cpp-13-x86-64-linux-gnu
1015s   cpp-x86-64-linux-gnu dctrl-tools g++ g++-13 g++-13-x86-64-linux-gnu
1015s   g++-x86-64-linux-gnu gcc gcc-13 gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu
1015s   gfortran gfortran-13 gfortran-13-x86-64-linux-gnu gfortran-x86-64-linux-gnu
1015s   icu-devtools libasan8 libatomic1 libblas-dev libbz2-dev libc-dev-bin
1015s   libc6-dev libcc1-0 libcrypt-dev libgcc-13-dev libgfortran-13-dev libhwasan0
1015s   libicu-dev libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev
1015s   liblapack-dev liblsan0 liblzma-dev libmpc3 libncurses-dev libpcre2-16-0
1015s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev
1015s   libquadmath0 libreadline-dev libstdc++-13-dev libtsan2 libubsan1
1015s   linux-libc-dev pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev
1015s   rpcsvc-proto zlib1g-dev
1015s 0 upgraded, 61 newly installed, 0 to remove and 0 not upgraded.
1015s Need to get 99.5 MB/99.5 MB of archives.
1015s After this operation, 374 MB of additional disk space will be used.
1015s Get:1 /tmp/autopkgtest.dKMco3/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [716 B]
1015s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu6 [20.4 kB]
1015s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB]
1015s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB]
1015s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB]
1015s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu6 [2126 kB]
1015s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB]
1015s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB]
1015s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.2 MB]
1015s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-17ubuntu2 [1030 B]
1015s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B]
1015s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB]
1015s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240303-1ubuntu1 [47.7 kB]
1015s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240303-1ubuntu1 [29.1 kB]
1015s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240303-1ubuntu1 [10.4 kB]
1015s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240303-1ubuntu1 [3026 kB]
1015s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240303-1ubuntu1 [1310 kB]
1015s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240303-1ubuntu1 [2732 kB]
1015s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240303-1ubuntu1 [1172 kB]
1015s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240303-1ubuntu1 [1629 kB]
1015s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240303-1ubuntu1 [155 kB]
1015s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-17ubuntu2 [2687 kB]
1015s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [21.9 MB]
1015s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-17ubuntu2 [477 kB]
1015s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B]
1015s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B]
1015s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-17ubuntu2 [2340 kB]
1015s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [12.5 MB]
1016s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-17ubuntu2 [14.5 kB]
1016s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B]
1016s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B]
1016s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B]
1016s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 dctrl-tools amd64 2.24-3build2 [66.9 kB]
1016s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran-13-dev amd64 13.2.0-17ubuntu2 [942 kB]
1016s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-17ubuntu2 [11.6 MB]
1016s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-13 amd64 13.2.0-17ubuntu2 [10.3 kB]
1016s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1024 B]
1016s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 gfortran amd64 4:13.2.0-7ubuntu1 [1176 B]
1016s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 icu-devtools amd64 74.2-1ubuntu1 [212 kB]
1016s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 libblas-dev amd64 3.12.0-3 [170 kB]
1016s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 libbz2-dev amd64 1.0.8-5ubuntu1 [33.6 kB]
1016s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 libicu-dev amd64 74.2-1ubuntu1 [11.9 MB]
1016s Get:43 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu1 [294 kB]
1016s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B]
1016s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B]
1016s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack-dev amd64 3.12.0-3 [5196 kB]
1016s Get:47 http://ftpmaster.internal/ubuntu noble/main amd64 libncurses-dev amd64 6.4+20240113-1ubuntu1 [384 kB]
1016s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu1 [211 kB]
1016s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu1 [198 kB]
1016s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu1 [6808 B]
1016s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-dev amd64 10.42-4ubuntu1 [743 kB]
1016s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 libpkgconf3 amd64 1.8.1-2 [31.1 kB]
1016s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB]
1016s Get:54 http://ftpmaster.internal/ubuntu noble/main amd64 libpng-dev amd64 1.6.43-1 [264 kB]
1016s Get:55 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline-dev amd64 8.2-3 [167 kB]
1016s Get:56 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf-bin amd64 1.8.1-2 [20.7 kB]
1016s Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 pkgconf amd64 1.8.1-2 [16.8 kB]
1016s Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 pkg-config amd64 1.8.1-2 [7170 B]
1016s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma-dev amd64 5.4.5-0.3 [205 kB]
1016s Get:60 http://ftpmaster.internal/ubuntu noble/universe amd64 r-base-dev all 4.3.2-1build1 [4336 B]
1016s Get:61 http://ftpmaster.internal/ubuntu noble/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
1016s Fetched 99.5 MB in 1s (137 MB/s)
1016s Selecting previously unselected package libc-dev-bin.
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1016s Preparing to unpack .../00-libc-dev-bin_2.39-0ubuntu6_amd64.deb ...
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1016s Selecting previously unselected package linux-libc-dev:amd64.
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1018s Selecting previously unselected package libgfortran-13-dev:amd64.
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1019s Unpacking gfortran (4:13.2.0-7ubuntu1) ...
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1019s Unpacking icu-devtools (74.2-1ubuntu1) ...
1019s Selecting previously unselected package libblas-dev:amd64.
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1019s Unpacking libblas-dev:amd64 (3.12.0-3) ...
1019s Selecting previously unselected package libbz2-dev:amd64.
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1019s Unpacking libbz2-dev:amd64 (1.0.8-5ubuntu1) ...
1019s Selecting previously unselected package libicu-dev:amd64.
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1019s Unpacking libicu-dev:amd64 (74.2-1ubuntu1) ...
1019s Selecting previously unselected package libjpeg-turbo8-dev:amd64.
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1019s Selecting previously unselected package libjpeg8-dev:amd64.
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1019s Selecting previously unselected package libjpeg-dev:amd64.
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1019s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ...
1019s Selecting previously unselected package liblapack-dev:amd64.
1019s Preparing to unpack .../44-liblapack-dev_3.12.0-3_amd64.deb ...
1019s Unpacking liblapack-dev:amd64 (3.12.0-3) ...
1019s Selecting previously unselected package libncurses-dev:amd64.
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1019s Unpacking libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ...
1019s Selecting previously unselected package libpcre2-16-0:amd64.
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1019s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu1) ...
1019s Selecting previously unselected package libpcre2-32-0:amd64.
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1019s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu1) ...
1019s Selecting previously unselected package libpcre2-posix3:amd64.
1019s Preparing to unpack .../48-libpcre2-posix3_10.42-4ubuntu1_amd64.deb ...
1019s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu1) ...
1019s Selecting previously unselected package libpcre2-dev:amd64.
1019s Preparing to unpack .../49-libpcre2-dev_10.42-4ubuntu1_amd64.deb ...
1019s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu1) ...
1019s Selecting previously unselected package libpkgconf3:amd64.
1019s Preparing to unpack .../50-libpkgconf3_1.8.1-2_amd64.deb ...
1019s Unpacking libpkgconf3:amd64 (1.8.1-2) ...
1019s Selecting previously unselected package zlib1g-dev:amd64.
1019s Preparing to unpack .../51-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_amd64.deb ...
1019s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ...
1019s Selecting previously unselected package libpng-dev:amd64.
1019s Preparing to unpack .../52-libpng-dev_1.6.43-1_amd64.deb ...
1019s Unpacking libpng-dev:amd64 (1.6.43-1) ...
1019s Selecting previously unselected package libreadline-dev:amd64.
1019s Preparing to unpack .../53-libreadline-dev_8.2-3_amd64.deb ...
1019s Unpacking libreadline-dev:amd64 (8.2-3) ...
1019s Selecting previously unselected package pkgconf-bin.
1020s Preparing to unpack .../54-pkgconf-bin_1.8.1-2_amd64.deb ...
1020s Unpacking pkgconf-bin (1.8.1-2) ...
1020s Selecting previously unselected package pkgconf:amd64.
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1020s Unpacking pkgconf:amd64 (1.8.1-2) ...
1020s Selecting previously unselected package pkg-config:amd64.
1020s Preparing to unpack .../56-pkg-config_1.8.1-2_amd64.deb ...
1020s Unpacking pkg-config:amd64 (1.8.1-2) ...
1020s Selecting previously unselected package liblzma-dev:amd64.
1020s Preparing to unpack .../57-liblzma-dev_5.4.5-0.3_amd64.deb ...
1020s Unpacking liblzma-dev:amd64 (5.4.5-0.3) ...
1020s Selecting previously unselected package r-base-dev.
1020s Preparing to unpack .../58-r-base-dev_4.3.2-1build1_all.deb ...
1020s Unpacking r-base-dev (4.3.2-1build1) ...
1020s Selecting previously unselected package pkg-r-autopkgtest.
1020s Preparing to unpack .../59-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
1020s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
1020s Selecting previously unselected package autopkgtest-satdep.
1020s Preparing to unpack .../60-2-autopkgtest-satdep.deb ...
1020s Unpacking autopkgtest-satdep (0) ...
1020s Setting up linux-libc-dev:amd64 (6.8.0-11.11) ...
1020s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu1) ...
1020s Setting up libpcre2-32-0:amd64 (10.42-4ubuntu1) ...
1020s Setting up libpkgconf3:amd64 (1.8.1-2) ...
1020s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ...
1020s Setting up libquadmath0:amd64 (14-20240303-1ubuntu1) ...
1020s Setting up libmpc3:amd64 (1.3.1-1) ...
1020s Setting up libatomic1:amd64 (14-20240303-1ubuntu1) ...
1020s Setting up icu-devtools (74.2-1ubuntu1) ...
1020s Setting up pkgconf-bin (1.8.1-2) ...
1020s Setting up liblzma-dev:amd64 (5.4.5-0.3) ...
1020s Setting up libubsan1:amd64 (14-20240303-1ubuntu1) ...
1020s Setting up libpcre2-posix3:amd64 (10.42-4ubuntu1) ...
1020s Setting up libhwasan0:amd64 (14-20240303-1ubuntu1) ...
1020s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ...
1020s Setting up libasan8:amd64 (14-20240303-1ubuntu1) ...
1020s Setting up libtsan2:amd64 (14-20240303-1ubuntu1) ...
1020s Setting up libisl23:amd64 (0.26-3) ...
1020s Setting up libc-dev-bin (2.39-0ubuntu6) ...
1020s Setting up libcc1-0:amd64 (14-20240303-1ubuntu1) ...
1020s Setting up liblsan0:amd64 (14-20240303-1ubuntu1) ...
1020s Setting up libblas-dev:amd64 (3.12.0-3) ...
1020s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
1020s Setting up dctrl-tools (2.24-3build2) ...
1020s Setting up libitm1:amd64 (14-20240303-1ubuntu1) ...
1020s Setting up cpp-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
1020s Setting up pkgconf:amd64 (1.8.1-2) ...
1020s Setting up liblapack-dev:amd64 (3.12.0-3) ...
1020s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
1020s Setting up pkg-config:amd64 (1.8.1-2) ...
1020s Setting up libgcc-13-dev:amd64 (13.2.0-17ubuntu2) ...
1020s Setting up libc6-dev:amd64 (2.39-0ubuntu6) ...
1020s Setting up libgfortran-13-dev:amd64 (13.2.0-17ubuntu2) ...
1020s Setting up libicu-dev:amd64 (74.2-1ubuntu1) ...
1020s Setting up libstdc++-13-dev:amd64 (13.2.0-17ubuntu2) ...
1020s Setting up libbz2-dev:amd64 (1.0.8-5ubuntu1) ...
1020s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
1020s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu1) ...
1020s Setting up libncurses-dev:amd64 (6.4+20240113-1ubuntu1) ...
1020s Setting up libpcre2-dev:amd64 (10.42-4ubuntu1) ...
1020s Setting up cpp-13 (13.2.0-17ubuntu2) ...
1020s Setting up gcc-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
1020s Setting up libreadline-dev:amd64 (8.2-3) ...
1020s Setting up gfortran-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
1020s Setting up gcc-13 (13.2.0-17ubuntu2) ...
1020s Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3ubuntu1) ...
1020s Setting up cpp (4:13.2.0-7ubuntu1) ...
1020s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ...
1020s Setting up g++-13-x86-64-linux-gnu (13.2.0-17ubuntu2) ...
1020s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
1020s Setting up libpng-dev:amd64 (1.6.43-1) ...
1020s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ...
1020s Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
1020s Setting up gcc (4:13.2.0-7ubuntu1) ...
1020s Setting up gfortran-13 (13.2.0-17ubuntu2) ...
1020s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ...
1020s Setting up g++-13 (13.2.0-17ubuntu2) ...
1020s Setting up gfortran (4:13.2.0-7ubuntu1) ...
1020s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
1020s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
1020s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
1020s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
1020s Setting up g++ (4:13.2.0-7ubuntu1) ...
1020s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
1020s Setting up build-essential (12.10ubuntu1) ...
1020s Setting up r-base-dev (4.3.2-1build1) ...
1020s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
1020s Setting up autopkgtest-satdep (0) ...
1020s Processing triggers for man-db (2.12.0-3) ...
1021s Processing triggers for install-info (7.1-3) ...
1021s Processing triggers for libc-bin (2.39-0ubuntu6) ...
1022s (Reading database ... 77096 files and directories currently installed.)
1022s Removing autopkgtest-satdep (0) ...
1023s autopkgtest [02:53:41]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
1023s autopkgtest [02:53:41]: test pkg-r-autopkgtest: [-----------------------
1023s Test: Try to load the R library g.data
1023s 
1023s R version 4.3.2 (2023-10-31) -- "Eye Holes"
1023s Copyright (C) 2023 The R Foundation for Statistical Computing
1023s Platform: x86_64-pc-linux-gnu (64-bit)
1023s 
1023s R is free software and comes with ABSOLUTELY NO WARRANTY.
1023s You are welcome to redistribute it under certain conditions.
1023s Type 'license()' or 'licence()' for distribution details.
1023s 
1023s R is a collaborative project with many contributors.
1023s Type 'contributors()' for more information and
1023s 'citation()' on how to cite R or R packages in publications.
1023s 
1023s Type 'demo()' for some demos, 'help()' for on-line help, or
1023s 'help.start()' for an HTML browser interface to help.
1023s Type 'q()' to quit R.
1023s 
1023s > library('g.data')
1023s > 
1023s > 
1023s Other tests are currently unsupported!
1023s They will be progressively added.
1023s autopkgtest [02:53:41]: test pkg-r-autopkgtest: -----------------------]
1023s pkg-r-autopkgtest    PASS
1023s autopkgtest [02:53:41]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
1023s autopkgtest [02:53:41]: @@@@@@@@@@@@@@@@@@@@ summary
1023s run-unit-test        PASS
1023s pkg-r-autopkgtest    PASS
1033s Creating nova instance adt-noble-amd64-r-cran-g.data-20240325-023638-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-amd64-server-20240324.img (UUID 4e56ccec-954f-4884-8b9c-3e1a29e50308)...