0s autopkgtest [13:17:21]: starting date: 2024-03-03 0s autopkgtest [13:17:21]: git checkout: d9c0295 adt_testbed.py: supress warnings from apt using a shell pipeline 0s autopkgtest [13:17:21]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.o0gkwqs4/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:python-deeptoolsintervals,src:db5.3,src:python3.12,src:readline --apt-upgrade python-deeptools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python-deeptoolsintervals/0.1.9-3build8 db5.3/5.3.28+dfsg2-5 python3.12/3.12.2-3build7 readline/8.2-3.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-11.secgroup --name adt-noble-amd64-python-deeptools-20240303-131721-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 444s autopkgtest [13:24:45]: @@@@@@@@@@@@@@@@@@@@ test bed setup 444s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 445s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [22.0 kB] 445s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [1510 kB] 445s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [297 kB] 445s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [398 kB] 445s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [280 kB] 445s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 445s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 445s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [581 kB] 445s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [1835 kB] 445s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 445s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [6184 B] 445s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [20.5 kB] 445s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 446s Fetched 5079 kB in 1s (6337 kB/s) 446s Reading package lists... 451s Reading package lists... 451s Building dependency tree... 451s Reading state information... 451s Calculating upgrade... 451s The following packages will be REMOVED: 451s libreadline8 451s The following NEW packages will be installed: 451s libreadline8t64 linux-headers-6.8.0-11 linux-headers-6.8.0-11-generic 451s linux-image-6.8.0-11-generic linux-modules-6.8.0-11-generic 451s linux-modules-extra-6.8.0-11-generic 451s The following packages have been kept back: 451s libpython3.12-minimal libpython3.12-stdlib python3.12 python3.12-minimal 451s The following packages will be upgraded: 451s libpython3-stdlib linux-generic linux-headers-generic linux-headers-virtual 451s linux-image-generic linux-image-virtual linux-virtual python3 451s python3-minimal python3-rich readline-common 451s 11 upgraded, 6 newly installed, 1 to remove and 4 not upgraded. 451s Need to get 185 MB of archives. 451s After this operation, 280 MB of additional disk space will be used. 451s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 readline-common all 8.2-3.1 [56.4 kB] 451s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libreadline8t64 amd64 8.2-3.1 [153 kB] 451s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 python3-minimal amd64 3.12.1-0ubuntu2 [27.0 kB] 451s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 python3 amd64 3.12.1-0ubuntu2 [24.1 kB] 451s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libpython3-stdlib amd64 3.12.1-0ubuntu2 [9738 B] 451s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 python3-rich all 13.7.0-1 [189 kB] 451s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 linux-modules-6.8.0-11-generic amd64 6.8.0-11.11 [38.2 MB] 452s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 linux-image-6.8.0-11-generic amd64 6.8.0-11.11 [14.6 MB] 452s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 linux-modules-extra-6.8.0-11-generic amd64 6.8.0-11.11 [114 MB] 453s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 linux-generic amd64 6.8.0-11.11+1 [1708 B] 453s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 linux-image-generic amd64 6.8.0-11.11+1 [9454 B] 453s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 linux-virtual amd64 6.8.0-11.11+1 [1688 B] 453s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 linux-image-virtual amd64 6.8.0-11.11+1 [9426 B] 453s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 linux-headers-virtual amd64 6.8.0-11.11+1 [1646 B] 453s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 linux-headers-6.8.0-11 all 6.8.0-11.11 [13.6 MB] 453s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 linux-headers-6.8.0-11-generic amd64 6.8.0-11.11 [3869 kB] 453s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 linux-headers-generic amd64 6.8.0-11.11+1 [9330 B] 453s Fetched 185 MB in 1s (140 MB/s) 453s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70423 files and directories currently installed.) 453s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 453s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 453s dpkg: libreadline8:amd64: dependency problems, but removing anyway as you requested: 453s parted depends on libreadline8 (>= 6.0). 453s libpython3.12-stdlib:amd64 depends on libreadline8 (>= 7.0~beta). 453s gpgsm depends on libreadline8 (>= 6.0). 453s gpgconf depends on libreadline8 (>= 6.0). 453s gpg depends on libreadline8 (>= 6.0). 453s gawk depends on libreadline8 (>= 6.0). 453s fdisk depends on libreadline8 (>= 6.0). 453s 453s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70423 files and directories currently installed.) 453s Removing libreadline8:amd64 (8.2-3) ... 453s Selecting previously unselected package libreadline8t64:amd64. 453s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70411 files and directories currently installed.) 453s Preparing to unpack .../libreadline8t64_8.2-3.1_amd64.deb ... 453s Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 454s Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 454s Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 454s Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 454s Unpacking libreadline8t64:amd64 (8.2-3.1) ... 454s Preparing to unpack .../python3-minimal_3.12.1-0ubuntu2_amd64.deb ... 454s Unpacking python3-minimal (3.12.1-0ubuntu2) over (3.12.1-0ubuntu1) ... 454s Setting up python3-minimal (3.12.1-0ubuntu2) ... 454s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70431 files and directories currently installed.) 454s Preparing to unpack .../00-python3_3.12.1-0ubuntu2_amd64.deb ... 454s Unpacking python3 (3.12.1-0ubuntu2) over (3.12.1-0ubuntu1) ... 454s Preparing to unpack .../01-libpython3-stdlib_3.12.1-0ubuntu2_amd64.deb ... 454s Unpacking libpython3-stdlib:amd64 (3.12.1-0ubuntu2) over (3.12.1-0ubuntu1) ... 454s Preparing to unpack .../02-python3-rich_13.7.0-1_all.deb ... 454s Unpacking python3-rich (13.7.0-1) over (13.3.1-2) ... 454s Selecting previously unselected package linux-modules-6.8.0-11-generic. 454s Preparing to unpack .../03-linux-modules-6.8.0-11-generic_6.8.0-11.11_amd64.deb ... 454s Unpacking linux-modules-6.8.0-11-generic (6.8.0-11.11) ... 454s Selecting previously unselected package linux-image-6.8.0-11-generic. 454s Preparing to unpack .../04-linux-image-6.8.0-11-generic_6.8.0-11.11_amd64.deb ... 454s Unpacking linux-image-6.8.0-11-generic (6.8.0-11.11) ... 454s Selecting previously unselected package linux-modules-extra-6.8.0-11-generic. 454s Preparing to unpack .../05-linux-modules-extra-6.8.0-11-generic_6.8.0-11.11_amd64.deb ... 454s Unpacking linux-modules-extra-6.8.0-11-generic (6.8.0-11.11) ... 455s Preparing to unpack .../06-linux-generic_6.8.0-11.11+1_amd64.deb ... 455s Unpacking linux-generic (6.8.0-11.11+1) over (6.6.0-14.14) ... 456s Preparing to unpack .../07-linux-image-generic_6.8.0-11.11+1_amd64.deb ... 456s Unpacking linux-image-generic (6.8.0-11.11+1) over (6.6.0-14.14) ... 456s Preparing to unpack .../08-linux-virtual_6.8.0-11.11+1_amd64.deb ... 456s Unpacking linux-virtual (6.8.0-11.11+1) over (6.6.0-14.14) ... 456s Preparing to unpack .../09-linux-image-virtual_6.8.0-11.11+1_amd64.deb ... 456s Unpacking linux-image-virtual (6.8.0-11.11+1) over (6.6.0-14.14) ... 456s Preparing to unpack .../10-linux-headers-virtual_6.8.0-11.11+1_amd64.deb ... 456s Unpacking linux-headers-virtual (6.8.0-11.11+1) over (6.6.0-14.14) ... 456s Selecting previously unselected package linux-headers-6.8.0-11. 456s Preparing to unpack .../11-linux-headers-6.8.0-11_6.8.0-11.11_all.deb ... 456s Unpacking linux-headers-6.8.0-11 (6.8.0-11.11) ... 458s Selecting previously unselected package linux-headers-6.8.0-11-generic. 458s Preparing to unpack .../12-linux-headers-6.8.0-11-generic_6.8.0-11.11_amd64.deb ... 458s Unpacking linux-headers-6.8.0-11-generic (6.8.0-11.11) ... 459s Preparing to unpack .../13-linux-headers-generic_6.8.0-11.11+1_amd64.deb ... 459s Unpacking linux-headers-generic (6.8.0-11.11+1) over (6.6.0-14.14) ... 459s Setting up linux-headers-6.8.0-11 (6.8.0-11.11) ... 459s Setting up linux-headers-6.8.0-11-generic (6.8.0-11.11) ... 459s Setting up linux-modules-6.8.0-11-generic (6.8.0-11.11) ... 461s Setting up readline-common (8.2-3.1) ... 461s Setting up libpython3-stdlib:amd64 (3.12.1-0ubuntu2) ... 461s Setting up linux-modules-extra-6.8.0-11-generic (6.8.0-11.11) ... 463s Setting up python3 (3.12.1-0ubuntu2) ... 463s Setting up linux-headers-generic (6.8.0-11.11+1) ... 463s Setting up linux-image-6.8.0-11-generic (6.8.0-11.11) ... 465s I: /boot/vmlinuz is now a symlink to vmlinuz-6.8.0-11-generic 465s I: /boot/initrd.img is now a symlink to initrd.img-6.8.0-11-generic 465s Setting up libreadline8t64:amd64 (8.2-3.1) ... 465s Setting up linux-image-virtual (6.8.0-11.11+1) ... 465s Setting up linux-image-generic (6.8.0-11.11+1) ... 465s Setting up linux-headers-virtual (6.8.0-11.11+1) ... 465s Setting up linux-generic (6.8.0-11.11+1) ... 465s Setting up python3-rich (13.7.0-1) ... 466s Setting up linux-virtual (6.8.0-11.11+1) ... 466s Processing triggers for libc-bin (2.39-0ubuntu2) ... 466s Processing triggers for man-db (2.12.0-3) ... 466s Processing triggers for install-info (7.1-3) ... 466s Processing triggers for linux-image-6.8.0-11-generic (6.8.0-11.11) ... 466s /etc/kernel/postinst.d/initramfs-tools: 466s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 466s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 473s /etc/kernel/postinst.d/zz-update-grub: 473s Sourcing file `/etc/default/grub' 473s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 473s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 473s Generating grub configuration file ... 473s Found linux image: /boot/vmlinuz-6.8.0-11-generic 473s Found initrd image: /boot/initrd.img-6.8.0-11-generic 473s Found linux image: /boot/vmlinuz-6.6.0-14-generic 473s Found initrd image: /boot/initrd.img-6.6.0-14-generic 474s Warning: os-prober will not be executed to detect other bootable partitions. 474s Systems on them will not be added to the GRUB boot configuration. 474s Check GRUB_DISABLE_OS_PROBER documentation entry. 474s Adding boot menu entry for UEFI Firmware Settings ... 474s done 474s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 474s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 474s Reading package lists... 474s Building dependency tree... 474s Reading state information... 475s The following packages will be REMOVED: 475s linux-headers-6.6.0-14* linux-headers-6.6.0-14-generic* 475s linux-image-6.6.0-14-generic* linux-modules-6.6.0-14-generic* 475s linux-modules-extra-6.6.0-14-generic* 475s 0 upgraded, 0 newly installed, 5 to remove and 4 not upgraded. 475s After this operation, 276 MB disk space will be freed. 475s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108373 files and directories currently installed.) 475s Removing linux-headers-6.6.0-14-generic (6.6.0-14.14) ... 475s Removing linux-headers-6.6.0-14 (6.6.0-14.14) ... 477s Removing linux-image-6.6.0-14-generic (6.6.0-14.14) ... 478s W: Removing the running kernel 478s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.8.0-11-generic 478s I: /boot/initrd.img.old is now a symlink to initrd.img-6.8.0-11-generic 478s /etc/kernel/postrm.d/initramfs-tools: 478s update-initramfs: Deleting /boot/initrd.img-6.6.0-14-generic 478s /etc/kernel/postrm.d/zz-update-grub: 478s Sourcing file `/etc/default/grub' 478s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 478s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 478s Generating grub configuration file ... 478s Found linux image: /boot/vmlinuz-6.8.0-11-generic 478s Found initrd image: /boot/initrd.img-6.8.0-11-generic 478s Warning: os-prober will not be executed to detect other bootable partitions. 478s Systems on them will not be added to the GRUB boot configuration. 478s Check GRUB_DISABLE_OS_PROBER documentation entry. 478s Adding boot menu entry for UEFI Firmware Settings ... 478s done 478s Removing linux-modules-extra-6.6.0-14-generic (6.6.0-14.14) ... 480s Removing linux-modules-6.6.0-14-generic (6.6.0-14.14) ... 480s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70585 files and directories currently installed.) 480s Purging configuration files for linux-modules-extra-6.6.0-14-generic (6.6.0-14.14) ... 480s Purging configuration files for linux-image-6.6.0-14-generic (6.6.0-14.14) ... 480s Purging configuration files for linux-modules-6.6.0-14-generic (6.6.0-14.14) ... 481s sh: Attempting to set up Debian/Ubuntu apt sources automatically 481s sh: Distribution appears to be Ubuntu 484s Reading package lists... 485s Building dependency tree... 485s Reading state information... 485s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 485s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: eatmydata is already the newest version (131-1). 485s dbus is already the newest version (1.14.10-3ubuntu1). 485s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 485s Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 485s Reading package lists... 485s Building dependency tree... 485s Reading state information... 485s rng-tools-debian is already the newest version (2.4). 485s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 486s Reading package lists... 486s Building dependency tree... 486s Reading state information... 486s haveged is already the newest version (1.9.14-1ubuntu1). 486s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 486s Reading package lists... 486s Building dependency tree... 486s Reading state information... 487s The following packages will be REMOVED: 487s cloud-init* python3-configobj* python3-debconf* 487s 0 upgraded, 0 newly installed, 3 to remove and 4 not upgraded. 487s After this operation, 3248 kB disk space will be freed. 487s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70584 files and directories currently installed.) 487s Removing cloud-init (24.1-0ubuntu1) ... 488s Removing python3-configobj (5.0.8-3) ... 488s Removing python3-debconf (1.5.86) ... 488s Processing triggers for man-db (2.12.0-3) ... 488s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70195 files and directories currently installed.) 488s Purging configuration files for cloud-init (24.1-0ubuntu1) ... 489s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 489s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 489s Reading package lists... 489s Building dependency tree... 489s Reading state information... 490s linux-generic is already the newest version (6.8.0-11.11+1). 490s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 490s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 490s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 490s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 490s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 490s Hit:5 http://ftpmaster.internal/ubuntu noble-backports InRelease 494s Reading package lists... 494s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 494s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 494s Reading package lists... 494s Building dependency tree... 494s Reading state information... 494s Calculating upgrade... 495s The following packages have been kept back: 495s libpython3.12-minimal libpython3.12-stdlib python3.12 python3.12-minimal 495s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 495s Reading package lists... 495s Building dependency tree... 495s Reading state information... 495s 0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded. 495s autopkgtest [13:25:36]: rebooting testbed after setup commands that affected boot 650s autopkgtest [13:28:11]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 650s autopkgtest [13:28:11]: testbed dpkg architecture: amd64 651s autopkgtest [13:28:12]: @@@@@@@@@@@@@@@@@@@@ apt-source python-deeptools 651s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 651s W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (main/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target CNF (main/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (universe/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (universe/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target CNF (universe/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (restricted/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (restricted/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target CNF (restricted/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (multiverse/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (multiverse/binary-i386/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target CNF (multiverse/cnf/Commands-amd64) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 651s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 652s Get:1 http://ftpmaster.internal/ubuntu noble/universe python-deeptools 3.5.4+dfsg-1 (dsc) [2548 B] 652s Get:2 http://ftpmaster.internal/ubuntu noble/universe python-deeptools 3.5.4+dfsg-1 (tar) [24.6 MB] 652s Get:3 http://ftpmaster.internal/ubuntu noble/universe python-deeptools 3.5.4+dfsg-1 (diff) [6048 B] 652s gpgv: Signature made Mon Dec 18 10:38:33 2023 UTC 652s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 652s gpgv: issuer "emollier@debian.org" 652s gpgv: Can't check signature: No public key 652s dpkg-source: warning: cannot verify inline signature for ./python-deeptools_3.5.4+dfsg-1.dsc: no acceptable signature found 653s autopkgtest [13:28:14]: testing package python-deeptools version 3.5.4+dfsg-1 653s autopkgtest [13:28:14]: build not needed 654s autopkgtest [13:28:15]: test pybuild-autopkgtest: preparing testbed 655s Reading package lists... 655s Building dependency tree... 655s Reading state information... 655s Correcting dependencies...Starting pkgProblemResolver with broken count: 0 655s Starting 2 pkgProblemResolver with broken count: 0 655s Done 656s Done 656s Starting pkgProblemResolver with broken count: 0 656s Starting 2 pkgProblemResolver with broken count: 0 656s Done 656s The following additional packages will be installed: 656s autoconf automake autopoint autotools-dev blt build-essential cpp cpp-13 656s cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 656s dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz 656s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-13 656s g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 656s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext intltool-debian 656s libarchive-zip-perl libasan8 libatomic1 libbigwig0 libblas3 libc-dev-bin 656s libc6-dev libcc1-0 libcrypt-dev libdb5.3t64 libdebhelper-perl libdeflate0 656s libdw1 libfile-stripnondeterminism-perl libfontconfig1 libgcc-13-dev 656s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhts3 libhtscodecs2 656s libhwasan0 libimagequant0 libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 656s libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore libjson-perl 656s liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblsan0 libmpc3 libnsl-dev 656s libopenjp2-7 libpython3.11 libpython3.11-minimal libpython3.11-stdlib 656s libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libqhull-r8.0 656s libquadmath0 libraqm0 libsharpyuv0 libstdc++-13-dev libsub-override-perl 656s libtcl8.6 libtiff6 libtirpc-dev libtk8.6 libtool libtsan2 libubsan1 libwebp7 656s libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 656s linux-libc-dev m4 po-debconf pybuild-plugin-autopkgtest 656s pybuild-plugin-pyproject python-matplotlib-data python3-alabaster 656s python3-all python3-appdirs python3-brotli python3-build python3-contourpy 656s python3-cycler python3-dateutil python3-decorator python3-deeptools 656s python3-deeptoolsintervals python3-distutils python3-docutils 656s python3-fastjsonschema python3-fonttools python3-fs python3-imagesize 656s python3-importlib-metadata python3-iniconfig python3-installer 656s python3-jupyter-core python3-kiwisolver python3-lib2to3 python3-lxml 656s python3-lz4 python3-matplotlib python3-more-itertools python3-mpmath 656s python3-nbformat python3-numpy python3-numpydoc python3-packaging 656s python3-pil python3-pil.imagetk python3-platformdirs python3-plotly 656s python3-pluggy python3-py2bit python3-pybigwig python3-pyproject-hooks 656s python3-pysam python3-pytest python3-roman python3-scipy python3-setuptools 656s python3-snowballstemmer python3-sphinx python3-sympy python3-tabulate 656s python3-tenacity python3-tk python3-toml python3-traitlets python3-ufolib2 656s python3-unicodedata2 python3-wheel python3-zipp python3.11 656s python3.11-minimal python3.12 python3.12-minimal rpcsvc-proto sgml-base 656s sphinx-common tk8.6-blt2.5 unicode-data x11-common xml-core 656s Suggested packages: 656s autoconf-archive gnu-standards autoconf-doc blt-demo cpp-doc gcc-13-locales 656s cpp-13-doc dh-make flit g++-multilib g++-13-multilib gcc-13-doc gcc-multilib 656s manpages-dev flex bison gdb gcc-doc gcc-13-multilib gdb-x86-64-linux-gnu 656s gettext-doc libasprintf-dev libgettextpo-dev glibc-doc libjs-jquery-ui-docs 656s liblcms2-utils libstdc++-13-doc tcl8.6 tk8.6 libtool-doc gfortran 656s | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python3-pip 656s python3-venv python-build-doc python-cycler-doc 656s python-python-deeptoolsintervals-doc docutils-doc fonts-linuxlibertine 656s | ttf-linux-libertine texlive-lang-french texlive-latex-base 656s texlive-latex-recommended python-fastjsonschema-doc python-installer-doc 656s python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript 656s gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python3-cairocffi 656s python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado 656s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 656s gfortran python3-dev python-pil-doc python3-pandas python3-ipykernel 656s python-scipy-doc python-setuptools-doc python3-stemmer fonts-freefont-otf 656s imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme sphinx-doc 656s tex-gyre texlive-fonts-recommended texlive-plain-generic texlive-fonts-extra 656s python-sympy-doc python-tenacity-doc tix python3-tk-dbg python3.11-venv 656s python3.11-doc binfmt-support python3.12-venv python3.12-doc sgml-base-doc 656s Recommended packages: 656s manpages manpages-dev libc-devtools libarchive-cpio-perl javascript-common 656s libjson-xs-perl libltdl-dev libmail-sendmail-perl libpaper-utils python3-bs4 656s python3-cssselect python3-html5lib python3-olefile isympy-common 657s The following packages will be REMOVED: 657s libdb5.3 657s The following NEW packages will be installed: 657s autoconf automake autopoint autotools-dev blt build-essential cpp cpp-13 657s cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 657s dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz 657s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-13 657s g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-13 657s gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext intltool-debian 657s libarchive-zip-perl libasan8 libatomic1 libbigwig0 libblas3 libc-dev-bin 657s libc6-dev libcc1-0 libcrypt-dev libdb5.3t64 libdebhelper-perl libdeflate0 657s libdw1 libfile-stripnondeterminism-perl libfontconfig1 libgcc-13-dev 657s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhts3 libhtscodecs2 657s libhwasan0 libimagequant0 libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 657s libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore libjson-perl 657s liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblsan0 libmpc3 libnsl-dev 657s libopenjp2-7 libpython3.11 libpython3.11-minimal libpython3.11-stdlib 657s libpython3.12t64 libqhull-r8.0 libquadmath0 libraqm0 libsharpyuv0 657s libstdc++-13-dev libsub-override-perl libtcl8.6 libtiff6 libtirpc-dev 657s libtk8.6 libtool libtsan2 libubsan1 libwebp7 libwebpdemux2 libwebpmux3 657s libxft2 libxrender1 libxslt1.1 libxss1 linux-libc-dev m4 po-debconf 657s pybuild-plugin-autopkgtest pybuild-plugin-pyproject python-matplotlib-data 657s python3-alabaster python3-all python3-appdirs python3-brotli python3-build 657s python3-contourpy python3-cycler python3-dateutil python3-decorator 657s python3-deeptools python3-deeptoolsintervals python3-distutils 657s python3-docutils python3-fastjsonschema python3-fonttools python3-fs 657s python3-imagesize python3-importlib-metadata python3-iniconfig 657s python3-installer python3-jupyter-core python3-kiwisolver python3-lib2to3 657s python3-lxml python3-lz4 python3-matplotlib python3-more-itertools 657s python3-mpmath python3-nbformat python3-numpy python3-numpydoc 657s python3-packaging python3-pil python3-pil.imagetk python3-platformdirs 657s python3-plotly python3-pluggy python3-py2bit python3-pybigwig 657s python3-pyproject-hooks python3-pysam python3-pytest python3-roman 657s python3-scipy python3-setuptools python3-snowballstemmer python3-sphinx 657s python3-sympy python3-tabulate python3-tenacity python3-tk python3-toml 657s python3-traitlets python3-ufolib2 python3-unicodedata2 python3-wheel 657s python3-zipp python3.11 python3.11-minimal rpcsvc-proto sgml-base 657s sphinx-common tk8.6-blt2.5 unicode-data x11-common xml-core 657s The following packages will be upgraded: 657s libpython3.12-minimal libpython3.12-stdlib python3.12 python3.12-minimal 657s 4 upgraded, 169 newly installed, 1 to remove and 0 not upgraded. 657s 1 not fully installed or removed. 657s Need to get 166 MB of archives. 657s After this operation, 710 MB of additional disk space will be used. 657s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3.12 amd64 3.12.2-3build7 [653 kB] 657s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.12-stdlib amd64 3.12.2-3build7 [2001 kB] 657s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3.12-minimal amd64 3.12.2-3build7 [2210 kB] 657s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.12-minimal amd64 3.12.2-3build7 [830 kB] 657s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-5 [734 kB] 657s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.12t64 amd64 3.12.2-3build7 [2338 kB] 657s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-deeptoolsintervals amd64 0.1.9-3build8 [53.1 kB] 657s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 python3-more-itertools all 10.2.0-1 [52.9 kB] 657s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 python3-zipp all 1.0.0-6 [6090 B] 657s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 python3-importlib-metadata all 4.12.0-1 [17.8 kB] 657s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 657s Get:12 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 657s Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 657s Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 657s Get:15 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-lyx all 2.4.0~RC3-1 [170 kB] 657s Get:16 http://ftpmaster.internal/ubuntu noble/universe amd64 python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] 657s Get:17 http://ftpmaster.internal/ubuntu noble/main amd64 python3-dateutil all 2.8.2-3 [79.2 kB] 657s Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240221-2.1ubuntu1 [147 kB] 657s Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 libimagequant0 amd64 2.18.0-1 [36.3 kB] 657s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 657s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 657s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 liblcms2-2 amd64 2.14-2 [161 kB] 657s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 libopenjp2-7 amd64 2.5.0-2 [174 kB] 657s Get:24 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] 657s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] 657s Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 libraqm0 amd64 0.10.1-1 [14.6 kB] 657s Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 657s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 657s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 657s Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.4 [15.6 kB] 657s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.4 [230 kB] 657s Get:32 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] 657s Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 libwebpdemux2 amd64 1.3.2-0.4 [12.4 kB] 657s Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 libwebpmux3 amd64 1.3.2-0.4 [25.6 kB] 657s Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 python3-pil amd64 10.2.0-1 [487 kB] 657s Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB] 657s Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1ubuntu1 [36.9 kB] 657s Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1ubuntu1 [139 kB] 657s Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] 657s Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB] 657s Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 657s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B] 657s Get:43 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.13-2 [776 kB] 657s Get:44 http://ftpmaster.internal/ubuntu noble/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [630 kB] 657s Get:45 http://ftpmaster.internal/ubuntu noble/main amd64 blt amd64 2.5.3+dfsg-7 [4826 B] 657s Get:46 http://ftpmaster.internal/ubuntu noble/main amd64 python3-tk amd64 3.11.5-1 [112 kB] 657s Get:47 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pil.imagetk amd64 10.2.0-1 [9584 B] 657s Get:48 http://ftpmaster.internal/ubuntu noble/main amd64 libpython3.11-minimal amd64 3.11.8-1 [840 kB] 657s Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 python3.11-minimal amd64 3.11.8-1 [2218 kB] 657s Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 libpython3.11-stdlib amd64 3.11.8-1 [1932 kB] 657s Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 python3.11 amd64 3.11.8-1 [589 kB] 657s Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 657s Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240221-2.1ubuntu1 [928 kB] 657s Get:54 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 657s Get:55 http://ftpmaster.internal/ubuntu noble/main amd64 python3-numpy amd64 1:1.24.2-2 [7141 kB] 657s Get:56 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-contourpy amd64 1.0.7-1build2 [283 kB] 657s Get:57 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-cycler all 0.11.0-1 [8156 B] 657s Get:58 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-brotli amd64 1.1.0-2 [340 kB] 657s Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 657s Get:60 http://ftpmaster.internal/ubuntu noble/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [30.4 kB] 657s Get:61 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-scipy amd64 1.11.4-6 [19.4 MB] 657s Get:62 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 657s Get:63 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-mpmath all 1.2.1-3 [421 kB] 657s Get:64 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-sympy all 1.12-7 [3966 kB] 657s Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 python3-appdirs all 1.4.4-4 [10.9 kB] 657s Get:66 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-fs all 2.4.16-3 [91.1 kB] 657s Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libxslt1.1 amd64 1.1.35-1 [164 kB] 657s Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 python3-lxml amd64 5.1.0-1 [2179 kB] 657s Get:69 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-lz4 amd64 4.0.2+dfsg-1build2 [27.0 kB] 657s Get:70 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-unicodedata2 amd64 15.1.0+ds-1 [367 kB] 657s Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 python3-lib2to3 all 3.11.5-1 [79.0 kB] 657s Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 python3-distutils all 3.11.5-1 [131 kB] 657s Get:73 http://ftpmaster.internal/ubuntu noble/main amd64 python3-all amd64 3.12.1-0ubuntu2 [906 B] 657s Get:74 http://ftpmaster.internal/ubuntu noble/universe amd64 unicode-data all 15.1.0-1 [8878 kB] 657s Get:75 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-fonttools amd64 4.46.0-1 [1693 kB] 657s Get:76 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-kiwisolver amd64 1.4.4-1build2 [69.4 kB] 657s Get:77 http://ftpmaster.internal/ubuntu noble/main amd64 python3-packaging all 23.2-1 [40.6 kB] 657s Get:78 http://ftpmaster.internal/ubuntu noble/universe amd64 libqhull-r8.0 amd64 2020.2-6 [194 kB] 657s Get:79 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-matplotlib amd64 3.6.3-1ubuntu3 [7486 kB] 657s Get:80 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 657s Get:81 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-sphinxdoc all 7.2.6-4 [149 kB] 657s Get:82 http://ftpmaster.internal/ubuntu noble/main amd64 libjson-perl all 4.10000-1 [81.9 kB] 657s Get:83 http://ftpmaster.internal/ubuntu noble/main amd64 sphinx-common all 7.2.6-4 [741 kB] 657s Get:84 http://ftpmaster.internal/ubuntu noble/main amd64 python3-alabaster all 0.7.12-1 [17.8 kB] 657s Get:85 http://ftpmaster.internal/ubuntu noble/main amd64 sgml-base all 1.31 [11.4 kB] 657s Get:86 http://ftpmaster.internal/ubuntu noble/main amd64 xml-core all 0.19 [20.3 kB] 657s Get:87 http://ftpmaster.internal/ubuntu noble/main amd64 docutils-common all 0.20.1+dfsg-3 [132 kB] 657s Get:88 http://ftpmaster.internal/ubuntu noble/main amd64 python3-roman all 3.3-3 [9632 B] 657s Get:89 http://ftpmaster.internal/ubuntu noble/main amd64 python3-docutils all 0.20.1+dfsg-3 [393 kB] 657s Get:90 http://ftpmaster.internal/ubuntu noble/main amd64 python3-imagesize all 1.4.1-1 [6844 B] 657s Get:91 http://ftpmaster.internal/ubuntu noble/main amd64 python3-snowballstemmer all 2.2.0-4 [59.7 kB] 657s Get:92 http://ftpmaster.internal/ubuntu noble/main amd64 python3-sphinx all 7.2.6-4 [557 kB] 657s Get:93 http://ftpmaster.internal/ubuntu noble/main amd64 python3-tabulate all 0.8.10-1 [38.2 kB] 657s Get:94 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-numpydoc all 1.6.0-0ubuntu3 [50.5 kB] 657s Get:95 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-fastjsonschema all 2.19.0-1 [19.6 kB] 657s Get:96 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-platformdirs all 4.2.0-1 [16.1 kB] 657s Get:97 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-traitlets all 5.5.0-2 [85.0 kB] 657s Get:98 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-jupyter-core all 5.3.2-1 [25.4 kB] 657s Get:99 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-nbformat all 5.9.1-1 [41.2 kB] 657s Get:100 http://ftpmaster.internal/ubuntu noble/main amd64 python3-tenacity all 8.2.3-2 [14.8 kB] 657s Get:101 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-plotly all 5.15.0+dfsg1-1 [2222 kB] 657s Get:102 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-py2bit amd64 0.3.1-2 [24.5 kB] 657s Get:103 http://ftpmaster.internal/ubuntu noble/universe amd64 libbigwig0 amd64 0.4.7+dfsg-3 [29.8 kB] 657s Get:104 http://ftpmaster.internal/ubuntu noble/main amd64 libpython3.11 amd64 3.11.8-1 [2212 kB] 657s Get:105 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pybigwig amd64 0.3.22+dfsg-1build1 [47.4 kB] 657s Get:106 http://ftpmaster.internal/ubuntu noble/universe amd64 libhtscodecs2 amd64 1.6.0-1 [98.9 kB] 657s Get:107 http://ftpmaster.internal/ubuntu noble/universe amd64 libhts3 amd64 1.18+ds-1 [428 kB] 657s Get:108 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pysam amd64 0.22.0+ds-1 [4556 kB] 657s Get:109 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-deeptools all 3.5.4+dfsg-1 [144 kB] 657s Get:110 http://ftpmaster.internal/ubuntu noble/main amd64 autotools-dev all 20220109.1 [44.9 kB] 657s Get:111 http://ftpmaster.internal/ubuntu noble/main amd64 m4 amd64 1.4.19-4 [243 kB] 657s Get:112 http://ftpmaster.internal/ubuntu noble/main amd64 autoconf all 2.71-3 [339 kB] 657s Get:113 http://ftpmaster.internal/ubuntu noble/main amd64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 657s Get:114 http://ftpmaster.internal/ubuntu noble/main amd64 autopoint all 0.21-14ubuntu1 [422 kB] 657s Get:115 http://ftpmaster.internal/ubuntu noble/main amd64 libdebhelper-perl all 13.14.1ubuntu1 [89.5 kB] 657s Get:116 http://ftpmaster.internal/ubuntu noble/main amd64 libisl23 amd64 0.26-3 [741 kB] 657s Get:117 http://ftpmaster.internal/ubuntu noble/main amd64 libmpc3 amd64 1.3.1-1 [54.1 kB] 657s Get:118 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-16ubuntu1 [11.2 MB] 657s Get:119 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-16ubuntu1 [1032 B] 657s Get:120 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 657s Get:121 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 657s Get:122 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240221-2.1ubuntu1 [47.9 kB] 657s Get:123 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240221-2.1ubuntu1 [29.1 kB] 657s Get:124 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240221-2.1ubuntu1 [10.4 kB] 657s Get:125 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240221-2.1ubuntu1 [3025 kB] 657s Get:126 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240221-2.1ubuntu1 [1309 kB] 657s Get:127 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240221-2.1ubuntu1 [2732 kB] 657s Get:128 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240221-2.1ubuntu1 [1172 kB] 657s Get:129 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240221-2.1ubuntu1 [1629 kB] 657s Get:130 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240221-2.1ubuntu1 [155 kB] 657s Get:131 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-16ubuntu1 [2687 kB] 657s Get:132 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-16ubuntu1 [21.8 MB] 658s Get:133 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-16ubuntu1 [475 kB] 658s Get:134 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 658s Get:135 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 658s Get:136 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu2 [20.4 kB] 658s Get:137 http://ftpmaster.internal/ubuntu noble/main amd64 linux-libc-dev amd64 6.8.0-11.11 [1595 kB] 658s Get:138 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 658s Get:139 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] 658s Get:140 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] 658s Get:141 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 658s Get:142 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu2 [2126 kB] 658s Get:143 http://ftpmaster.internal/ubuntu noble/main amd64 libtool all 2.4.7-7 [166 kB] 658s Get:144 http://ftpmaster.internal/ubuntu noble/main amd64 dh-autoreconf all 20 [16.1 kB] 658s Get:145 http://ftpmaster.internal/ubuntu noble/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 658s Get:146 http://ftpmaster.internal/ubuntu noble/main amd64 libsub-override-perl all 0.10-1 [10.0 kB] 658s Get:147 http://ftpmaster.internal/ubuntu noble/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [18.1 kB] 658s Get:148 http://ftpmaster.internal/ubuntu noble/main amd64 dh-strip-nondeterminism all 1.13.1-1 [5362 B] 658s Get:149 http://ftpmaster.internal/ubuntu noble/main amd64 libdw1 amd64 0.190-1 [260 kB] 658s Get:150 http://ftpmaster.internal/ubuntu noble/main amd64 debugedit amd64 1:5.0-5 [46.1 kB] 658s Get:151 http://ftpmaster.internal/ubuntu noble/main amd64 dwz amd64 0.15-1 [112 kB] 658s Get:152 http://ftpmaster.internal/ubuntu noble/main amd64 gettext amd64 0.21-14ubuntu1 [864 kB] 658s Get:153 http://ftpmaster.internal/ubuntu noble/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] 658s Get:154 http://ftpmaster.internal/ubuntu noble/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] 658s Get:155 http://ftpmaster.internal/ubuntu noble/main amd64 debhelper all 13.14.1ubuntu1 [869 kB] 658s Get:156 http://ftpmaster.internal/ubuntu noble/main amd64 python3-setuptools all 68.1.2-2 [396 kB] 658s Get:157 http://ftpmaster.internal/ubuntu noble/universe amd64 dh-python all 6.20231223ubuntu1 [111 kB] 658s Get:158 http://ftpmaster.internal/ubuntu noble/universe amd64 pybuild-plugin-autopkgtest all 6.20231223ubuntu1 [1754 B] 658s Get:159 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pyproject-hooks all 1.0.0-2 [9434 B] 658s Get:160 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-toml all 0.10.2-1 [16.5 kB] 658s Get:161 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-wheel all 0.42.0-1 [53.1 kB] 658s Get:162 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-build all 1.0.3-2 [27.3 kB] 658s Get:163 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-installer all 0.7.0+dfsg1-2 [18.1 kB] 658s Get:164 http://ftpmaster.internal/ubuntu noble/universe amd64 pybuild-plugin-pyproject all 6.20231223ubuntu1 [1742 B] 658s Get:165 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 658s Get:166 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pluggy all 1.4.0-1 [20.4 kB] 658s Get:167 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest all 7.4.4-1 [305 kB] 658s Get:168 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-16ubuntu1 [2339 kB] 658s Get:169 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-16ubuntu1 [12.5 MB] 658s Get:170 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-16ubuntu1 [14.5 kB] 658s Get:171 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 658s Get:172 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 658s Get:173 http://ftpmaster.internal/ubuntu noble/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 659s Fetched 166 MB in 1s (136 MB/s) 659s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70140 files and directories currently installed.) 659s Preparing to unpack .../python3.12_3.12.2-3build7_amd64.deb ... 659s Unpacking python3.12 (3.12.2-3build7) over (3.12.2-1) ... 659s Preparing to unpack .../libpython3.12-stdlib_3.12.2-3build7_amd64.deb ... 659s Unpacking libpython3.12-stdlib:amd64 (3.12.2-3build7) over (3.12.2-1) ... 659s Preparing to unpack .../python3.12-minimal_3.12.2-3build7_amd64.deb ... 659s Unpacking python3.12-minimal (3.12.2-3build7) over (3.12.2-1) ... 659s Preparing to unpack .../libpython3.12-minimal_3.12.2-3build7_amd64.deb ... 659s Unpacking libpython3.12-minimal:amd64 (3.12.2-3build7) over (3.12.2-1) ... 659s dpkg: libdb5.3:amd64: dependency problems, but removing anyway as you requested: 659s libsasl2-modules-db:amd64 depends on libdb5.3. 659s libperl5.38:amd64 depends on libdb5.3. 659s libpam-modules:amd64 depends on libdb5.3. 659s iproute2 depends on libdb5.3. 659s apt-utils depends on libdb5.3. 659s 659s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70138 files and directories currently installed.) 659s Removing libdb5.3:amd64 (5.3.28+dfsg2-4) ... 659s Selecting previously unselected package libdb5.3t64:amd64. 659s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70132 files and directories currently installed.) 659s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-5_amd64.deb ... 659s Unpacking libdb5.3t64:amd64 (5.3.28+dfsg2-5) ... 659s Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-5) ... 659s Selecting previously unselected package libpython3.12t64:amd64. 659s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70138 files and directories currently installed.) 659s Preparing to unpack .../000-libpython3.12t64_3.12.2-3build7_amd64.deb ... 659s Unpacking libpython3.12t64:amd64 (3.12.2-3build7) ... 660s Selecting previously unselected package python3-deeptoolsintervals. 660s Preparing to unpack .../001-python3-deeptoolsintervals_0.1.9-3build8_amd64.deb ... 660s Unpacking python3-deeptoolsintervals (0.1.9-3build8) ... 660s Selecting previously unselected package python3-more-itertools. 660s Preparing to unpack .../002-python3-more-itertools_10.2.0-1_all.deb ... 660s Unpacking python3-more-itertools (10.2.0-1) ... 660s Selecting previously unselected package python3-zipp. 660s Preparing to unpack .../003-python3-zipp_1.0.0-6_all.deb ... 660s Unpacking python3-zipp (1.0.0-6) ... 660s Selecting previously unselected package python3-importlib-metadata. 660s Preparing to unpack .../004-python3-importlib-metadata_4.12.0-1_all.deb ... 660s Unpacking python3-importlib-metadata (4.12.0-1) ... 660s Selecting previously unselected package libjs-jquery. 660s Preparing to unpack .../005-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 660s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 660s Selecting previously unselected package libjs-jquery-ui. 660s Preparing to unpack .../006-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 660s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 660s Selecting previously unselected package fonts-dejavu-mono. 660s Preparing to unpack .../007-fonts-dejavu-mono_2.37-8_all.deb ... 660s Unpacking fonts-dejavu-mono (2.37-8) ... 660s Selecting previously unselected package fonts-dejavu-core. 660s Preparing to unpack .../008-fonts-dejavu-core_2.37-8_all.deb ... 660s Unpacking fonts-dejavu-core (2.37-8) ... 660s Selecting previously unselected package fonts-lyx. 660s Preparing to unpack .../009-fonts-lyx_2.4.0~RC3-1_all.deb ... 660s Unpacking fonts-lyx (2.4.0~RC3-1) ... 660s Selecting previously unselected package python-matplotlib-data. 660s Preparing to unpack .../010-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ... 660s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ... 660s Selecting previously unselected package python3-dateutil. 660s Preparing to unpack .../011-python3-dateutil_2.8.2-3_all.deb ... 660s Unpacking python3-dateutil (2.8.2-3) ... 660s Selecting previously unselected package libgomp1:amd64. 660s Preparing to unpack .../012-libgomp1_14-20240221-2.1ubuntu1_amd64.deb ... 660s Unpacking libgomp1:amd64 (14-20240221-2.1ubuntu1) ... 660s Selecting previously unselected package libimagequant0:amd64. 660s Preparing to unpack .../013-libimagequant0_2.18.0-1_amd64.deb ... 660s Unpacking libimagequant0:amd64 (2.18.0-1) ... 660s Selecting previously unselected package libjpeg-turbo8:amd64. 660s Preparing to unpack .../014-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ... 660s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 660s Selecting previously unselected package libjpeg8:amd64. 660s Preparing to unpack .../015-libjpeg8_8c-2ubuntu11_amd64.deb ... 660s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 660s Selecting previously unselected package liblcms2-2:amd64. 660s Preparing to unpack .../016-liblcms2-2_2.14-2_amd64.deb ... 660s Unpacking liblcms2-2:amd64 (2.14-2) ... 660s Selecting previously unselected package libopenjp2-7:amd64. 660s Preparing to unpack .../017-libopenjp2-7_2.5.0-2_amd64.deb ... 660s Unpacking libopenjp2-7:amd64 (2.5.0-2) ... 660s Selecting previously unselected package libgraphite2-3:amd64. 660s Preparing to unpack .../018-libgraphite2-3_1.3.14-2_amd64.deb ... 660s Unpacking libgraphite2-3:amd64 (1.3.14-2) ... 660s Selecting previously unselected package libharfbuzz0b:amd64. 660s Preparing to unpack .../019-libharfbuzz0b_8.3.0-2_amd64.deb ... 660s Unpacking libharfbuzz0b:amd64 (8.3.0-2) ... 660s Selecting previously unselected package libraqm0:amd64. 660s Preparing to unpack .../020-libraqm0_0.10.1-1_amd64.deb ... 660s Unpacking libraqm0:amd64 (0.10.1-1) ... 660s Selecting previously unselected package libdeflate0:amd64. 660s Preparing to unpack .../021-libdeflate0_1.19-1_amd64.deb ... 660s Unpacking libdeflate0:amd64 (1.19-1) ... 660s Selecting previously unselected package libjbig0:amd64. 660s Preparing to unpack .../022-libjbig0_2.1-6.1ubuntu1_amd64.deb ... 660s Unpacking libjbig0:amd64 (2.1-6.1ubuntu1) ... 660s Selecting previously unselected package liblerc4:amd64. 660s Preparing to unpack .../023-liblerc4_4.0.0+ds-4ubuntu1_amd64.deb ... 660s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 660s Selecting previously unselected package libsharpyuv0:amd64. 660s Preparing to unpack .../024-libsharpyuv0_1.3.2-0.4_amd64.deb ... 660s Unpacking libsharpyuv0:amd64 (1.3.2-0.4) ... 660s Selecting previously unselected package libwebp7:amd64. 660s Preparing to unpack .../025-libwebp7_1.3.2-0.4_amd64.deb ... 660s Unpacking libwebp7:amd64 (1.3.2-0.4) ... 660s Selecting previously unselected package libtiff6:amd64. 660s Preparing to unpack .../026-libtiff6_4.5.1+git230720-3ubuntu1_amd64.deb ... 660s Unpacking libtiff6:amd64 (4.5.1+git230720-3ubuntu1) ... 660s Selecting previously unselected package libwebpdemux2:amd64. 660s Preparing to unpack .../027-libwebpdemux2_1.3.2-0.4_amd64.deb ... 660s Unpacking libwebpdemux2:amd64 (1.3.2-0.4) ... 660s Selecting previously unselected package libwebpmux3:amd64. 660s Preparing to unpack .../028-libwebpmux3_1.3.2-0.4_amd64.deb ... 660s Unpacking libwebpmux3:amd64 (1.3.2-0.4) ... 660s Selecting previously unselected package python3-pil:amd64. 660s Preparing to unpack .../029-python3-pil_10.2.0-1_amd64.deb ... 660s Unpacking python3-pil:amd64 (10.2.0-1) ... 660s Selecting previously unselected package libtcl8.6:amd64. 660s Preparing to unpack .../030-libtcl8.6_8.6.13+dfsg-2_amd64.deb ... 660s Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ... 661s Selecting previously unselected package fontconfig-config. 661s Preparing to unpack .../031-fontconfig-config_2.15.0-1ubuntu1_amd64.deb ... 661s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 661s Selecting previously unselected package libfontconfig1:amd64. 661s Preparing to unpack .../032-libfontconfig1_2.15.0-1ubuntu1_amd64.deb ... 661s Unpacking libfontconfig1:amd64 (2.15.0-1ubuntu1) ... 661s Selecting previously unselected package libxrender1:amd64. 661s Preparing to unpack .../033-libxrender1_1%3a0.9.10-1.1_amd64.deb ... 661s Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... 661s Selecting previously unselected package libxft2:amd64. 661s Preparing to unpack .../034-libxft2_2.3.6-1_amd64.deb ... 661s Unpacking libxft2:amd64 (2.3.6-1) ... 661s Selecting previously unselected package x11-common. 661s Preparing to unpack .../035-x11-common_1%3a7.7+23ubuntu2_all.deb ... 661s Unpacking x11-common (1:7.7+23ubuntu2) ... 661s Selecting previously unselected package libxss1:amd64. 661s Preparing to unpack .../036-libxss1_1%3a1.2.3-1build2_amd64.deb ... 661s Unpacking libxss1:amd64 (1:1.2.3-1build2) ... 661s Selecting previously unselected package libtk8.6:amd64. 661s Preparing to unpack .../037-libtk8.6_8.6.13-2_amd64.deb ... 661s Unpacking libtk8.6:amd64 (8.6.13-2) ... 661s Selecting previously unselected package tk8.6-blt2.5. 661s Preparing to unpack .../038-tk8.6-blt2.5_2.5.3+dfsg-7_amd64.deb ... 661s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... 661s Selecting previously unselected package blt. 661s Preparing to unpack .../039-blt_2.5.3+dfsg-7_amd64.deb ... 661s Unpacking blt (2.5.3+dfsg-7) ... 661s Selecting previously unselected package python3-tk:amd64. 661s Preparing to unpack .../040-python3-tk_3.11.5-1_amd64.deb ... 661s Unpacking python3-tk:amd64 (3.11.5-1) ... 661s Selecting previously unselected package python3-pil.imagetk:amd64. 661s Preparing to unpack .../041-python3-pil.imagetk_10.2.0-1_amd64.deb ... 661s Unpacking python3-pil.imagetk:amd64 (10.2.0-1) ... 661s Selecting previously unselected package libpython3.11-minimal:amd64. 661s Preparing to unpack .../042-libpython3.11-minimal_3.11.8-1_amd64.deb ... 661s Unpacking libpython3.11-minimal:amd64 (3.11.8-1) ... 661s Selecting previously unselected package python3.11-minimal. 661s Preparing to unpack .../043-python3.11-minimal_3.11.8-1_amd64.deb ... 661s Unpacking python3.11-minimal (3.11.8-1) ... 661s Selecting previously unselected package libpython3.11-stdlib:amd64. 661s Preparing to unpack .../044-libpython3.11-stdlib_3.11.8-1_amd64.deb ... 661s Unpacking libpython3.11-stdlib:amd64 (3.11.8-1) ... 661s Selecting previously unselected package python3.11. 661s Preparing to unpack .../045-python3.11_3.11.8-1_amd64.deb ... 661s Unpacking python3.11 (3.11.8-1) ... 661s Selecting previously unselected package libblas3:amd64. 661s Preparing to unpack .../046-libblas3_3.12.0-3_amd64.deb ... 661s Unpacking libblas3:amd64 (3.12.0-3) ... 661s Selecting previously unselected package libgfortran5:amd64. 661s Preparing to unpack .../047-libgfortran5_14-20240221-2.1ubuntu1_amd64.deb ... 661s Unpacking libgfortran5:amd64 (14-20240221-2.1ubuntu1) ... 661s Selecting previously unselected package liblapack3:amd64. 661s Preparing to unpack .../048-liblapack3_3.12.0-3_amd64.deb ... 661s Unpacking liblapack3:amd64 (3.12.0-3) ... 661s Selecting previously unselected package python3-numpy. 661s Preparing to unpack .../049-python3-numpy_1%3a1.24.2-2_amd64.deb ... 661s Unpacking python3-numpy (1:1.24.2-2) ... 662s Selecting previously unselected package python3-contourpy. 662s Preparing to unpack .../050-python3-contourpy_1.0.7-1build2_amd64.deb ... 662s Unpacking python3-contourpy (1.0.7-1build2) ... 662s Selecting previously unselected package python3-cycler. 662s Preparing to unpack .../051-python3-cycler_0.11.0-1_all.deb ... 662s Unpacking python3-cycler (0.11.0-1) ... 662s Selecting previously unselected package python3-brotli. 662s Preparing to unpack .../052-python3-brotli_1.1.0-2_amd64.deb ... 662s Unpacking python3-brotli (1.1.0-2) ... 662s Selecting previously unselected package python3-decorator. 662s Preparing to unpack .../053-python3-decorator_5.1.1-5_all.deb ... 662s Unpacking python3-decorator (5.1.1-5) ... 662s Selecting previously unselected package liblbfgsb0:amd64. 662s Preparing to unpack .../054-liblbfgsb0_3.0+dfsg.4-1_amd64.deb ... 662s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1) ... 662s Selecting previously unselected package python3-scipy. 662s Preparing to unpack .../055-python3-scipy_1.11.4-6_amd64.deb ... 662s Unpacking python3-scipy (1.11.4-6) ... 662s Selecting previously unselected package python3-ufolib2. 662s Preparing to unpack .../056-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 662s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 663s Selecting previously unselected package python3-mpmath. 663s Preparing to unpack .../057-python3-mpmath_1.2.1-3_all.deb ... 663s Unpacking python3-mpmath (1.2.1-3) ... 663s Selecting previously unselected package python3-sympy. 663s Preparing to unpack .../058-python3-sympy_1.12-7_all.deb ... 663s Unpacking python3-sympy (1.12-7) ... 663s Selecting previously unselected package python3-appdirs. 663s Preparing to unpack .../059-python3-appdirs_1.4.4-4_all.deb ... 663s Unpacking python3-appdirs (1.4.4-4) ... 663s Selecting previously unselected package python3-fs. 663s Preparing to unpack .../060-python3-fs_2.4.16-3_all.deb ... 663s Unpacking python3-fs (2.4.16-3) ... 663s Selecting previously unselected package libxslt1.1:amd64. 663s Preparing to unpack .../061-libxslt1.1_1.1.35-1_amd64.deb ... 663s Unpacking libxslt1.1:amd64 (1.1.35-1) ... 663s Selecting previously unselected package python3-lxml:amd64. 663s Preparing to unpack .../062-python3-lxml_5.1.0-1_amd64.deb ... 663s Unpacking python3-lxml:amd64 (5.1.0-1) ... 663s Selecting previously unselected package python3-lz4. 663s Preparing to unpack .../063-python3-lz4_4.0.2+dfsg-1build2_amd64.deb ... 663s Unpacking python3-lz4 (4.0.2+dfsg-1build2) ... 663s Selecting previously unselected package python3-unicodedata2. 663s Preparing to unpack .../064-python3-unicodedata2_15.1.0+ds-1_amd64.deb ... 663s Unpacking python3-unicodedata2 (15.1.0+ds-1) ... 663s Selecting previously unselected package python3-lib2to3. 663s Preparing to unpack .../065-python3-lib2to3_3.11.5-1_all.deb ... 663s Unpacking python3-lib2to3 (3.11.5-1) ... 663s Selecting previously unselected package python3-distutils. 663s Preparing to unpack .../066-python3-distutils_3.11.5-1_all.deb ... 663s Unpacking python3-distutils (3.11.5-1) ... 663s Selecting previously unselected package python3-all. 663s Preparing to unpack .../067-python3-all_3.12.1-0ubuntu2_amd64.deb ... 663s Unpacking python3-all (3.12.1-0ubuntu2) ... 663s Selecting previously unselected package unicode-data. 663s Preparing to unpack .../068-unicode-data_15.1.0-1_all.deb ... 663s Unpacking unicode-data (15.1.0-1) ... 663s Selecting previously unselected package python3-fonttools. 663s Preparing to unpack .../069-python3-fonttools_4.46.0-1_amd64.deb ... 663s Unpacking python3-fonttools (4.46.0-1) ... 663s Selecting previously unselected package python3-kiwisolver. 663s Preparing to unpack .../070-python3-kiwisolver_1.4.4-1build2_amd64.deb ... 663s Unpacking python3-kiwisolver (1.4.4-1build2) ... 664s Selecting previously unselected package python3-packaging. 664s Preparing to unpack .../071-python3-packaging_23.2-1_all.deb ... 664s Unpacking python3-packaging (23.2-1) ... 664s Selecting previously unselected package libqhull-r8.0:amd64. 664s Preparing to unpack .../072-libqhull-r8.0_2020.2-6_amd64.deb ... 664s Unpacking libqhull-r8.0:amd64 (2020.2-6) ... 664s Selecting previously unselected package python3-matplotlib. 664s Preparing to unpack .../073-python3-matplotlib_3.6.3-1ubuntu3_amd64.deb ... 664s Unpacking python3-matplotlib (3.6.3-1ubuntu3) ... 664s Selecting previously unselected package libjs-underscore. 664s Preparing to unpack .../074-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 664s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 664s Selecting previously unselected package libjs-sphinxdoc. 664s Preparing to unpack .../075-libjs-sphinxdoc_7.2.6-4_all.deb ... 664s Unpacking libjs-sphinxdoc (7.2.6-4) ... 664s Selecting previously unselected package libjson-perl. 664s Preparing to unpack .../076-libjson-perl_4.10000-1_all.deb ... 664s Unpacking libjson-perl (4.10000-1) ... 664s Selecting previously unselected package sphinx-common. 664s Preparing to unpack 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664s Unpacking python3-numpydoc (1.6.0-0ubuntu3) ... 664s Selecting previously unselected package python3-fastjsonschema. 664s Preparing to unpack .../089-python3-fastjsonschema_2.19.0-1_all.deb ... 664s Unpacking python3-fastjsonschema (2.19.0-1) ... 664s Selecting previously unselected package python3-platformdirs. 664s Preparing to unpack .../090-python3-platformdirs_4.2.0-1_all.deb ... 664s Unpacking python3-platformdirs (4.2.0-1) ... 664s Selecting previously unselected package python3-traitlets. 664s Preparing to unpack .../091-python3-traitlets_5.5.0-2_all.deb ... 664s Unpacking python3-traitlets (5.5.0-2) ... 664s Selecting previously unselected package python3-jupyter-core. 664s Preparing to unpack .../092-python3-jupyter-core_5.3.2-1_all.deb ... 664s Unpacking python3-jupyter-core (5.3.2-1) ... 664s Selecting previously unselected package python3-nbformat. 664s Preparing to unpack .../093-python3-nbformat_5.9.1-1_all.deb ... 664s Unpacking python3-nbformat (5.9.1-1) ... 664s Selecting previously unselected package python3-tenacity. 664s Preparing to unpack .../094-python3-tenacity_8.2.3-2_all.deb ... 664s Unpacking python3-tenacity (8.2.3-2) ... 665s Selecting previously unselected package python3-plotly. 665s Preparing to unpack .../095-python3-plotly_5.15.0+dfsg1-1_all.deb ... 665s Unpacking python3-plotly (5.15.0+dfsg1-1) ... 666s Selecting previously unselected package python3-py2bit. 666s Preparing to unpack .../096-python3-py2bit_0.3.1-2_amd64.deb ... 666s Unpacking python3-py2bit (0.3.1-2) ... 666s Selecting previously unselected package libbigwig0:amd64. 666s Preparing to unpack .../097-libbigwig0_0.4.7+dfsg-3_amd64.deb ... 666s Unpacking libbigwig0:amd64 (0.4.7+dfsg-3) ... 666s Selecting previously unselected package libpython3.11:amd64. 666s Preparing to unpack .../098-libpython3.11_3.11.8-1_amd64.deb ... 666s Unpacking libpython3.11:amd64 (3.11.8-1) ... 666s Selecting previously unselected package python3-pybigwig. 666s Preparing to unpack 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autotools-dev (20220109.1) ... 667s Selecting previously unselected package m4. 667s Preparing to unpack .../105-m4_1.4.19-4_amd64.deb ... 667s Unpacking m4 (1.4.19-4) ... 667s Selecting previously unselected package autoconf. 667s Preparing to unpack .../106-autoconf_2.71-3_all.deb ... 667s Unpacking autoconf (2.71-3) ... 667s Selecting previously unselected package automake. 667s Preparing to unpack .../107-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 667s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 667s Selecting previously unselected package autopoint. 667s Preparing to unpack .../108-autopoint_0.21-14ubuntu1_all.deb ... 667s Unpacking autopoint (0.21-14ubuntu1) ... 667s Selecting previously unselected package libdebhelper-perl. 667s Preparing to unpack .../109-libdebhelper-perl_13.14.1ubuntu1_all.deb ... 667s Unpacking libdebhelper-perl (13.14.1ubuntu1) ... 667s Selecting previously unselected package libisl23:amd64. 667s Preparing to unpack .../110-libisl23_0.26-3_amd64.deb ... 667s Unpacking libisl23:amd64 (0.26-3) ... 667s Selecting previously unselected package libmpc3:amd64. 667s Preparing to unpack .../111-libmpc3_1.3.1-1_amd64.deb ... 667s Unpacking libmpc3:amd64 (1.3.1-1) ... 667s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 667s Preparing to unpack .../112-cpp-13-x86-64-linux-gnu_13.2.0-16ubuntu1_amd64.deb ... 667s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-16ubuntu1) ... 667s Selecting previously unselected package cpp-13. 667s Preparing to unpack .../113-cpp-13_13.2.0-16ubuntu1_amd64.deb ... 667s Unpacking cpp-13 (13.2.0-16ubuntu1) ... 667s Selecting previously unselected package cpp-x86-64-linux-gnu. 667s Preparing to unpack .../114-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 667s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 667s Selecting previously unselected package cpp. 667s Preparing to unpack .../115-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 667s Unpacking cpp (4:13.2.0-7ubuntu1) ... 667s Selecting previously unselected package libcc1-0:amd64. 667s Preparing to unpack .../116-libcc1-0_14-20240221-2.1ubuntu1_amd64.deb ... 667s Unpacking libcc1-0:amd64 (14-20240221-2.1ubuntu1) ... 667s Selecting previously unselected package libitm1:amd64. 667s Preparing to unpack .../117-libitm1_14-20240221-2.1ubuntu1_amd64.deb ... 667s Unpacking libitm1:amd64 (14-20240221-2.1ubuntu1) ... 667s Selecting previously unselected package libatomic1:amd64. 667s Preparing to unpack .../118-libatomic1_14-20240221-2.1ubuntu1_amd64.deb ... 667s Unpacking libatomic1:amd64 (14-20240221-2.1ubuntu1) ... 667s Selecting previously unselected package libasan8:amd64. 667s Preparing to unpack .../119-libasan8_14-20240221-2.1ubuntu1_amd64.deb ... 667s Unpacking libasan8:amd64 (14-20240221-2.1ubuntu1) ... 667s Selecting previously unselected package liblsan0:amd64. 667s Preparing to unpack .../120-liblsan0_14-20240221-2.1ubuntu1_amd64.deb ... 667s Unpacking liblsan0:amd64 (14-20240221-2.1ubuntu1) ... 667s Selecting previously unselected package libtsan2:amd64. 667s Preparing to unpack .../121-libtsan2_14-20240221-2.1ubuntu1_amd64.deb ... 667s Unpacking libtsan2:amd64 (14-20240221-2.1ubuntu1) ... 667s Selecting previously unselected package libubsan1:amd64. 667s Preparing to unpack .../122-libubsan1_14-20240221-2.1ubuntu1_amd64.deb ... 667s Unpacking libubsan1:amd64 (14-20240221-2.1ubuntu1) ... 667s Selecting previously unselected package libhwasan0:amd64. 667s Preparing to unpack .../123-libhwasan0_14-20240221-2.1ubuntu1_amd64.deb ... 667s Unpacking libhwasan0:amd64 (14-20240221-2.1ubuntu1) ... 667s Selecting previously unselected package libquadmath0:amd64. 667s Preparing to unpack .../124-libquadmath0_14-20240221-2.1ubuntu1_amd64.deb ... 667s Unpacking libquadmath0:amd64 (14-20240221-2.1ubuntu1) ... 667s Selecting previously unselected package libgcc-13-dev:amd64. 667s Preparing to unpack .../125-libgcc-13-dev_13.2.0-16ubuntu1_amd64.deb ... 667s Unpacking libgcc-13-dev:amd64 (13.2.0-16ubuntu1) 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linux-libc-dev:amd64. 668s Preparing to unpack .../131-linux-libc-dev_6.8.0-11.11_amd64.deb ... 668s Unpacking linux-libc-dev:amd64 (6.8.0-11.11) ... 668s Selecting previously unselected package libcrypt-dev:amd64. 668s Preparing to unpack .../132-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... 668s Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... 668s Selecting previously unselected package libtirpc-dev:amd64. 668s Preparing to unpack .../133-libtirpc-dev_1.3.4+ds-1build1_amd64.deb ... 668s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1build1) ... 668s Selecting previously unselected package libnsl-dev:amd64. 668s Preparing to unpack .../134-libnsl-dev_1.3.0-3_amd64.deb ... 668s Unpacking libnsl-dev:amd64 (1.3.0-3) ... 668s Selecting previously unselected package rpcsvc-proto. 668s Preparing to unpack .../135-rpcsvc-proto_1.4.2-0ubuntu6_amd64.deb ... 668s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 668s Selecting previously unselected package libc6-dev:amd64. 668s Preparing to unpack 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Processing triggers for libc-bin (2.39-0ubuntu2) ... 702s Processing triggers for systemd (255.2-3ubuntu2) ... 702s Processing triggers for man-db (2.12.0-3) ... 703s Processing triggers for install-info (7.1-3) ... 703s Processing triggers for sgml-base (1.31) ... 703s Setting up docutils-common (0.20.1+dfsg-3) ... 704s Processing triggers for sgml-base (1.31) ... 704s Setting up python3-docutils (0.20.1+dfsg-3) ... 704s Setting up python3-sphinx (7.2.6-4) ... 705s Setting up python3-numpydoc (1.6.0-0ubuntu3) ... 705s Setting up python3-deeptools (3.5.4+dfsg-1) ... 705s Setting up autopkgtest-satdep (0) ... 709s (Reading database ... 98316 files and directories currently installed.) 709s Removing autopkgtest-satdep (0) ... 709s autopkgtest [13:29:10]: test pybuild-autopkgtest: pybuild-autopkgtest 709s autopkgtest [13:29:10]: test pybuild-autopkgtest: [----------------------- 709s pybuild-autopkgtest 710s I: pybuild base:305: cd /tmp/autopkgtest.291dgf/autopkgtest_tmp/build; python3.12 -m pytest -v /tmp/autopkgtest.291dgf/build.JOA/src/deeptools/ 710s ============================= test session starts ============================== 710s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 -- /usr/bin/python3.12 710s cachedir: .pytest_cache 710s rootdir: /tmp/autopkgtest.291dgf 711s collecting ... collected 100 items 711s 711s ../../build.JOA/src/deeptools/test/test_bamCoverage_and_bamCompare.py::test_bam_coverage_arguments PASSED [ 1%] 711s ../../build.JOA/src/deeptools/test/test_bamCoverage_and_bamCompare.py::test_bam_coverage_extend PASSED [ 2%] 711s ../../build.JOA/src/deeptools/test/test_bamCoverage_and_bamCompare.py::test_bam_coverage_extend_and_normalizeUsingRPGC PASSED [ 3%] 711s ../../build.JOA/src/deeptools/test/test_bamCoverage_and_bamCompare.py::test_bam_coverage_skipnas PASSED [ 4%] 711s ../../build.JOA/src/deeptools/test/test_bamCoverage_and_bamCompare.py::test_bam_coverage_filtering PASSED [ 5%] 711s 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future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). 726s 726s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 726s ================== 99 passed, 1 skipped, 1 warning in 15.99s =================== 726s autopkgtest [13:29:27]: test pybuild-autopkgtest: -----------------------] 726s pybuild-autopkgtest PASS 726s autopkgtest [13:29:27]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 727s autopkgtest [13:29:28]: @@@@@@@@@@@@@@@@@@@@ summary 727s pybuild-autopkgtest PASS 736s Creating nova instance adt-noble-amd64-python-deeptools-20240303-131721-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-amd64-server-20240302.img (UUID aa3f9c15-9a2c-4749-9a85-bf33b00fb48b)...