0s autopkgtest [04:05:46]: starting date and time: 2024-03-26 04:05:46+0000 0s autopkgtest [04:05:46]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [04:05:46]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.0t97e9pv/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed --apt-upgrade glam2 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=fftw3/3.3.10-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-33.secgroup --name adt-noble-amd64-glam2-20240326-040546-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 88s autopkgtest [04:07:14]: testbed dpkg architecture: amd64 88s autopkgtest [04:07:14]: testbed apt version: 2.7.12 88s autopkgtest [04:07:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 88s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 88s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB] 88s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [4027 kB] 89s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [7592 B] 89s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.0 kB] 89s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [483 kB] 89s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [731 kB] 89s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 89s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [37.9 kB] 89s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 89s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 89s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4390 kB] 89s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1260 kB] 89s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 89s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [28.6 kB] 89s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [96.8 kB] 89s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 92s Fetched 11.8 MB in 1s (8163 kB/s) 92s Reading package lists... 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 94s Calculating upgrade... 94s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 94s Reading package lists... 94s Building dependency tree... 94s Reading state information... 95s 0 upgraded, 0 newly installed, 0 to remove and 248 not upgraded. 95s sh: Attempting to set up Debian/Ubuntu apt sources automatically 95s sh: Distribution appears to be Ubuntu 96s Reading package lists... 96s Building dependency tree... 96s Reading state information... 96s eatmydata is already the newest version (131-1). 96s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 96s Reading package lists... 97s Building dependency tree... 97s Reading state information... 98s dbus is already the newest version (1.14.10-4ubuntu1). 98s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s Reading package lists... 98s Building dependency tree... 98s Reading state information... 98s rng-tools-debian is already the newest version (2.4). 98s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s Reading package lists... 98s Building dependency tree... 98s Reading state information... 98s The following packages will be REMOVED: 98s cloud-init* python3-configobj* python3-debconf* 98s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 98s After this operation, 3256 kB disk space will be freed. 99s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 99s Removing cloud-init (24.1.2-0ubuntu1) ... 99s Removing python3-configobj (5.0.8-3) ... 99s Removing python3-debconf (1.5.86) ... 99s Processing triggers for man-db (2.12.0-3) ... 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71475 files and directories currently installed.) 100s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 100s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 100s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 100s invoke-rc.d: policy-rc.d denied execution of try-restart. 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 101s linux-generic is already the newest version (6.8.0-11.11+1). 101s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 101s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 101s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 101s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 104s Reading package lists... 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 104s Calculating upgrade... 104s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 104s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s autopkgtest [04:07:30]: rebooting testbed after setup commands that affected boot 333s autopkgtest [04:11:19]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 333s autopkgtest [04:11:19]: @@@@@@@@@@@@@@@@@@@@ apt-source glam2 334s Get:1 http://ftpmaster.internal/ubuntu noble/universe glam2 1064-9 (dsc) [2006 B] 334s Get:2 http://ftpmaster.internal/ubuntu noble/universe glam2 1064-9 (tar) [238 kB] 334s Get:3 http://ftpmaster.internal/ubuntu noble/universe glam2 1064-9 (diff) [12.6 kB] 334s gpgv: Signature made Mon Dec 7 21:41:36 2020 UTC 334s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 334s gpgv: issuer "tille@debian.org" 334s gpgv: Can't check signature: No public key 334s dpkg-source: warning: cannot verify inline signature for ./glam2_1064-9.dsc: no acceptable signature found 334s autopkgtest [04:11:20]: testing package glam2 version 1064-9 335s autopkgtest [04:11:21]: build not needed 335s autopkgtest [04:11:21]: test check-no-args: preparing testbed 335s Reading package lists... 336s Building dependency tree... 336s Reading state information... 336s Starting pkgProblemResolver with broken count: 0 336s Starting 2 pkgProblemResolver with broken count: 0 336s Done 337s The following additional packages will be installed: 337s glam2 libfftw3-double3 libgomp1 337s Suggested packages: 337s libfftw3-bin libfftw3-dev 337s The following NEW packages will be installed: 337s autopkgtest-satdep glam2 libfftw3-double3 libgomp1 337s 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 337s Need to get 1218 kB/1219 kB of archives. 337s After this operation, 3224 kB of additional disk space will be used. 337s Get:1 /tmp/autopkgtest.OPjYZy/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [700 B] 337s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 337s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libfftw3-double3 amd64 3.3.10-1ubuntu1 [835 kB] 337s Get:4 http://ftpmaster.internal/ubuntu noble/universe amd64 glam2 amd64 1064-9 [236 kB] 337s Fetched 1218 kB in 0s (22.5 MB/s) 337s Selecting previously unselected package libgomp1:amd64. 337s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71420 files and directories currently installed.) 337s Preparing to unpack .../libgomp1_14-20240303-1ubuntu1_amd64.deb ... 337s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 337s Selecting previously unselected package libfftw3-double3:amd64. 337s Preparing to unpack .../libfftw3-double3_3.3.10-1ubuntu1_amd64.deb ... 337s Unpacking libfftw3-double3:amd64 (3.3.10-1ubuntu1) ... 337s Selecting previously unselected package glam2. 337s Preparing to unpack .../glam2_1064-9_amd64.deb ... 337s Unpacking glam2 (1064-9) ... 337s Selecting previously unselected package autopkgtest-satdep. 337s Preparing to unpack .../1-autopkgtest-satdep.deb ... 337s Unpacking autopkgtest-satdep (0) ... 337s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 337s Setting up libfftw3-double3:amd64 (3.3.10-1ubuntu1) ... 337s Setting up glam2 (1064-9) ... 337s Setting up autopkgtest-satdep (0) ... 337s Processing triggers for man-db (2.12.0-3) ... 338s Processing triggers for libc-bin (2.39-0ubuntu6) ... 340s (Reading database ... 71474 files and directories currently installed.) 340s Removing autopkgtest-satdep (0) ... 340s autopkgtest [04:11:26]: test check-no-args: [----------------------- 340s Usage: glam2 [options] alphabet my_seqs.fa 340s Alphabets: p = proteins, n = nucleotides, other = alphabet file 340s Options (default settings): 340s -h: show all options and their default settings 340s -o: output file (stdout) 340s -r: number of alignment runs (10) 340s -n: end each run after this many iterations without improvement (10000) 340s -2: examine both strands - forward and reverse complement 340s -z: minimum number of sequences in the alignment (2) 340s -a: minimum number of aligned columns (2) 340s -b: maximum number of aligned columns (50) 340s -w: initial number of aligned columns (20) 340s -d: Dirichlet mixture file 340s -D: deletion pseudocount (0.1) 340s -E: no-deletion pseudocount (2.0) 340s -I: insertion pseudocount (0.02) 340s -J: no-insertion pseudocount (1.0) 340s -q: weight for generic versus sequence-set-specific residue abundances (1e+99) 340s -t: initial temperature (1.2) 340s -c: cooling factor per n iterations (1.44) 340s -u: temperature lower bound (0.1) 340s -p: print progress information at each iteration 340s -m: column-sampling moves per site-sampling move (1.0) 340s -x: site sampling algorithm: 0=FAST 1=SLOW 2=FFT (0) 340s -s: seed for pseudo-random numbers (1) 340s SUCCESS: Help text is there! 341s autopkgtest [04:11:27]: test check-no-args: -----------------------] 341s autopkgtest [04:11:27]: test check-no-args: - - - - - - - - - - results - - - - - - - - - - 341s check-no-args PASS 341s autopkgtest [04:11:27]: test run-unit-test: preparing testbed 341s Reading package lists... 342s Building dependency tree... 342s Reading state information... 342s Starting pkgProblemResolver with broken count: 0 342s Starting 2 pkgProblemResolver with broken count: 0 342s Done 342s The following NEW packages will be installed: 342s autopkgtest-satdep 342s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 342s Need to get 0 B/700 B of archives. 342s After this operation, 0 B of additional disk space will be used. 342s Get:1 /tmp/autopkgtest.OPjYZy/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [700 B] 342s Selecting previously unselected package autopkgtest-satdep. 343s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71474 files and directories currently installed.) 343s Preparing to unpack .../2-autopkgtest-satdep.deb ... 343s Unpacking autopkgtest-satdep (0) ... 343s Setting up autopkgtest-satdep (0) ... 344s (Reading database ... 71474 files and directories currently installed.) 344s Removing autopkgtest-satdep (0) ... 344s autopkgtest [04:11:30]: test run-unit-test: [----------------------- 345s Run 1... 12350 iterations 346s Run 2... 17270 iterations 347s Run 3... 19781 iterations 348s Run 4... 12220 iterations 349s Run 5... 18950 iterations 350s Run 6... 15650 iterations 353s Run 7... 31104 iterations 354s Run 8... 21854 iterations 355s Run 9... 11813 iterations 356s Run 10... 11182 iterations 356s 356s Run 1... GLAM2: Gapped Local Alignment of Motifs 356s Version 1064 356s 356s glam2 p lipocalin.s 356s Sequences: 5 356s Greatest sequence length: 189 356s Residue counts: A=65 C=26 D=62 E=70 F=39 G=52 H=23 I=43 K=78 L=79 M=16 N=48 P=29 Q=26 R=28 S=53 T=43 V=63 W=15 Y=45 x=0 356s 356s Score: 80.3660 Columns: 20 Sequences: 5 356s 356s ******************** 356s ICYA_MANSE 13 KPVNDFDLSAFAGAWHEIAK 32 + 33.3 356s LACB_BOVIN 21 QTMKGLDIQKVAGTWYSLAM 40 + 18.8 356s BBP_PIEBR 12 KPVDNFDWSNYHGKWWEVAK 31 + 27.9 356s RETB_BOVIN 10 RVKENFDKARFAGTWYAMAK 29 + 25.5 356s MUP2_MOUSE 23 STGRNFNVEKINGEWHTIIL 42 + 13.4 356s 356s KPVDNFDISKFAGTWHEIAK 356s QTGEDLNKAAIH A YALIL 356s RVKKG LENVN E WSM M 356s S MN VQRY K TV 356s R W 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1.51 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1.06 356s 0 -0.0655 356s 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 -2.00 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0.233 356s 0 -0.0655 356s 0 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 4.91 356s 0 -0.0655 356s 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9.87 356s 0 -0.0655 356s 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 9.08 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 -1.61 356s 0 -0.0655 356s 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 -0.0557 356s 0 -0.0655 356s 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0.836 356s 0 -0.0655 356s 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 2.40 356s 0 -0.0655 356s 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.35 356s 0 -0.0655 356s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9 356s 0 -0.0655 356s 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0.355 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 22.5 356s 0 -0.0655 356s 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 7.34 356s 0 -0.0655 356s 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 -0.00544 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.12 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 1.70 356s 356s Score: 80.3660 Columns: 20 Sequences: 5 356s 356s ******************** 356s ICYA_MANSE 13 KPVNDFDLSAFAGAWHEIAK 32 + 33.3 356s LACB_BOVIN 21 QTMKGLDIQKVAGTWYSLAM 40 + 18.8 356s BBP_PIEBR 12 KPVDNFDWSNYHGKWWEVAK 31 + 27.9 356s RETB_BOVIN 10 RVKENFDKARFAGTWYAMAK 29 + 25.5 356s MUP2_MOUSE 23 STGRNFNVEKINGEWHTIIL 42 + 13.4 356s 356s KPVDNFDISKFAGTWHEIAK 356s QTGEDLNKAAIH A YALIL 356s RVKKG LENVN E WSM M 356s S MN VQRY K TV 356s R W 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1.51 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1.06 356s 0 -0.0655 356s 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 -2.00 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0.233 356s 0 -0.0655 356s 0 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 4.91 356s 0 -0.0655 356s 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9.87 356s 0 -0.0655 356s 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 9.08 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 -1.61 356s 0 -0.0655 356s 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 -0.0557 356s 0 -0.0655 356s 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0.836 356s 0 -0.0655 356s 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 2.40 356s 0 -0.0655 356s 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.35 356s 0 -0.0655 356s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9 356s 0 -0.0655 356s 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0.355 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 22.5 356s 0 -0.0655 356s 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 7.34 356s 0 -0.0655 356s 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 -0.00544 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.12 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 1.70 356s 356s Score: 80.3660 Columns: 20 Sequences: 5 356s 356s ******************** 356s ICYA_MANSE 13 KPVNDFDLSAFAGAWHEIAK 32 + 33.3 356s LACB_BOVIN 21 QTMKGLDIQKVAGTWYSLAM 40 + 18.8 356s BBP_PIEBR 12 KPVDNFDWSNYHGKWWEVAK 31 + 27.9 356s RETB_BOVIN 10 RVKENFDKARFAGTWYAMAK 29 + 25.5 356s MUP2_MOUSE 23 STGRNFNVEKINGEWHTIIL 42 + 13.4 356s 356s KPVDNFDISKFAGTWHEIAK 356s QTGEDLNKAAIH A YALIL 356s RVKKG LENVN E WSM M 356s S MN VQRY K TV 356s R W 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1.51 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1.06 356s 0 -0.0655 356s 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 -2.00 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0.233 356s 0 -0.0655 356s 0 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 4.91 356s 0 -0.0655 356s 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9.87 356s 0 -0.0655 356s 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 9.08 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 -1.61 356s 0 -0.0655 356s 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 -0.0557 356s 0 -0.0655 356s 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0.836 356s 0 -0.0655 356s 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 2.40 356s 0 -0.0655 356s 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.35 356s 0 -0.0655 356s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9 356s 0 -0.0655 356s 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0.355 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 22.5 356s 0 -0.0655 356s 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 7.34 356s 0 -0.0655 356s 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 -0.00544 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.12 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 1.70 356s 356s Score: 77.3362 Columns: 21 Sequences: 5 356s 356s ********************* 356s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 356s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 356s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 356s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 356s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 356s 356s NDFHWVLDTDYKNYAIAYLCN 356s KVL IIA NDKFLLFCMED 356s LDN PK ET IMGHNIK 356s T P S VN S R 356s V T Q Y 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 356s 0 -0.0655 356s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 356s 0 -0.0655 356s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 356s 0 -0.0655 356s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 356s 0 -0.0655 356s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 356s 0 -0.0655 356s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 356s 0 -0.0655 356s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 356s 0 -0.0655 356s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 356s 0 -0.0655 356s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 356s 356s Score: 77.3362 Columns: 21 Sequences: 5 356s 356s ********************* 356s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 356s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 356s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 356s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 356s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 356s 356s NDFHWVLDTDYKNYAIAYLCN 356s KVL IIA NDKFLLFCMED 356s LDN PK ET IMGHNIK 356s T P S VN S R 356s V T Q Y 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 356s 0 -0.0655 356s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 356s 0 -0.0655 356s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 356s 0 -0.0655 356s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 356s 0 -0.0655 356s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 356s 0 -0.0655 356s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 356s 0 -0.0655 356s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 356s 0 -0.0655 356s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 356s 0 -0.0655 356s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 356s 356s Score: 77.3362 Columns: 21 Sequences: 5 356s 356s ********************* 356s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 356s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 356s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 356s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 356s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 356s 356s NDFHWVLDTDYKNYAIAYLCN 356s KVL IIA NDKFLLFCMED 356s LDN PK ET IMGHNIK 356s T P S VN S R 356s V T Q Y 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 356s 0 -0.0655 356s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 356s 0 -0.0655 356s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 356s 0 -0.0655 356s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 356s 0 -0.0655 356s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 356s 0 -0.0655 356s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 356s 0 -0.0655 356s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 356s 0 -0.0655 356s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 356s 0 -0.0655 356s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 356s 356s Score: 77.3362 Columns: 21 Sequences: 5 356s 356s ********************* 356s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 356s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 356s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 356s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 356s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 356s 356s NDFHWVLDTDYKNYAIAYLCN 356s KVL IIA NDKFLLFCMED 356s LDN PK ET IMGHNIK 356s T P S VN S R 356s V T Q Y 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 356s 0 -0.0655 356s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 356s 0 -0.0655 356s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 356s 0 -0.0655 356s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 356s 0 -0.0655 356s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 356s 0 -0.0655 356s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 356s 0 -0.0655 356s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 356s 0 -0.0655 356s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 356s 0 -0.0655 356s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 356s 356s Score: 75.7471 Columns: 26 Sequences: 5 356s 356s ************************** 356s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCDYHPDK 125 + 40.6 356s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMENSAEPE 130 + 20.6 356s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCKYDEDK 121 + 32.0 356s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCRLLNLD 126 + 20.6 356s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLINEKDGE 130 + 18.1 356s 356s NDFHWVLDTDYKNYAIAYLCNYAEDE 356s KVL IIA NDKFLLFCMEDEDDGK 356s LDN PK ET IMGHNIKLHNLD 356s T P S VN S RSKPP 356s V T Q Y L 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 356s 0 -0.0655 356s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 356s 0 -0.0655 356s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 356s 0 -0.0655 356s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 356s 0 -0.0655 356s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 356s 0 -0.0655 356s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 356s 0 -0.0655 356s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 356s 0 -0.0655 356s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 356s 0 -0.0655 356s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 356s 0 -0.0655 356s 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 -0.975 356s 0 -0.0655 356s 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 -2.88 356s 0 -0.0655 356s 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1.18 356s 0 -0.0655 356s 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 -2.32 356s 0 -0.0655 356s 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3.72 356s 356s Score: 75.7471 Columns: 26 Sequences: 5 356s 356s ************************** 356s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCDYHPDK 125 + 40.6 356s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMENSAEPE 130 + 20.6 356s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCKYDEDK 121 + 32.0 356s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCRLLNLD 126 + 20.6 356s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLINEKDGE 130 + 18.1 356s 356s NDFHWVLDTDYKNYAIAYLCNYAEDE 356s KVL IIA NDKFLLFCMEDEDDGK 356s LDN PK ET IMGHNIKLHNLD 356s T P S VN S RSKPP 356s V T Q Y L 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 356s 0 -0.0655 356s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 356s 0 -0.0655 356s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 356s 0 -0.0655 356s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 356s 0 -0.0655 356s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 356s 0 -0.0655 356s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 356s 0 -0.0655 356s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 356s 0 -0.0655 356s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 356s 0 -0.0655 356s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 356s 0 -0.0655 356s 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 -0.975 356s 0 -0.0655 356s 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 -2.88 356s 0 -0.0655 356s 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1.18 356s 0 -0.0655 356s 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 -2.32 356s 0 -0.0655 356s 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3.72 356s 356s Score: 73.5314 Columns: 41 Sequences: 5 356s 356s ********.*******.......************************** 356s ICYA_MANSE 81 KYTKQGKY.VMTFK.FGQRVV..NLVPWVLATDYKNYAINYNCDYHPDK 125 + 38.9 356s LACB_BOVIN 91 KTKIPAVF.KIDALNE.......NKVL.VLDTDYKKYLLFCMENSAEPE 130 + 21.8 356s BBP_PIEBR 78 DSKIGKIYHKLTYGGVTKE....NVFN.VLSTDNKNYIIGYYCKYDEDK 121 + 32.8 356s RETB_BOVIN 79 DTEDPAKF.KMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSCRLLNLD 126 + 34.1 356s MUP2_MOUSE 91 KTEKAGEY.SVTYDGF.......NTFT.IPKTDYDNFLMAHLINEKDGE 130 + 33.6 356s 356s KTEIPAKY KMTYDGF NDFHWVLDTDYKNYAIAYLCNYAEDE 356s DSKKAGEF SIDAGNV KVL IIA NDKFLLFCMEDEDDGK 356s YTDGKI VLKFK E LDN PK ET IMGHNIKLHNLD 356s Q V V L T P S VN S RSKPP 356s W V T Q Y L 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 0 0 2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 5.22 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 1 0 2.46 356s 0 -0.0655 356s 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 2.94 356s 0 -0.0655 356s 0 0 1 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0.216 356s 0 -0.0655 356s 1 0 0 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 -1.06 356s 0 -0.0655 356s 2 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0.824 356s 0 -0.0655 356s 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 0 -0.808 356s 0 -0.0655 356s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 356s 1 -8.30 356s 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 1 0 1 0 0 0 1.49 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 4.57 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 3 0 0 0 0 2.41 356s 0 -0.0655 356s 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.65 356s 0 -0.0655 356s 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 -4.16 356s 0 -0.0655 356s 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 -1.19 356s 0 -0.0655 356s 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.743 356s 15 -23.5 356s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 356s 0 -0.0655 356s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 356s 0 -0.0655 356s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 356s 0 -0.0655 356s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 356s 0 -0.0655 356s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 356s 0 -0.0655 356s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 356s 0 -0.0655 356s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 356s 0 -0.0655 356s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 356s 0 -0.0655 356s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 356s 0 -0.0655 356s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 356s 0 -0.0655 356s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 356s 0 -0.0655 356s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 356s 0 -0.0655 356s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 356s 0 -0.0655 356s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 356s 0 -0.0655 356s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 356s 0 -0.0655 356s 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 -0.975 356s 0 -0.0655 356s 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 -2.88 356s 0 -0.0655 356s 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1.18 356s 0 -0.0655 356s 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 -2.32 356s 0 -0.0655 356s 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3.72 356s 356s 4122 iterations 356s 356s GLAM2: Gapped Local Alignment of Motifs 356s Version 1064 356s 356s glam2 -r 1 -n 1000 p crp0.s 356s Sequences: 18 356s Greatest sequence length: 105 356s Residue counts: A=572 C=345 D=0 E=0 F=0 G=395 H=0 I=0 K=0 L=0 M=0 N=0 P=0 Q=0 R=0 S=0 T=578 V=0 W=0 Y=0 x=0 356s 356s Score: 1431.87 Columns: 46 Sequences: 18 356s 356s *********.......*****.................********...............********........***.........****..********* 356s ce1cg 31 GCGAGAATAG......CGCGTGGTG.............TGAAAGACTGTTTTTTTGATCGTTTTCACAAAAA.....TGGAA.......GTCC..ACAGTCTTG 101 + 95.1 356s ara 31 TCACGGCAGAAAAGTCCACATTGATTATT.........TGCACGGCG..............TCACACTT........TGCTA.......TGCC..ATAGCATTT 94 + 114. 356s bglr1 37 ATATAACTTTATAAA.TTCCTAAAAT............TACACAAA...............GTTAATAAC.......TGTG........AGCAT.GGTCATATT 96 + 99.8 356s crp 46 ACATTGATG.......TACTGCATG.............TATGCAAAGGACG..........TCACATTACCG.....TGCAG.......TACA..GTTGATAGC 105 + 109. 356s cya 1 ACGGTGCTA.......CACTTG................TATGTAGCGCATC..........TTTCTTTACGG.....TCA.........ATCA..GCAAGGTGT 55 + 109. 356s deop2 18 AGATCGCAT.......TACAGTGATGCAAACTTG....TAAGTAGA...............TTTCCTTAAT......TGTGATGTG...TATC..GAAGTGTGT 84 + 105. 356s gale 10 AAACGGCTAAA.....TTCTTG................TGTAAACGA..............TTCCACTAATTTAT..TCCA........TGTC..ACACTTTTC 66 + 117. 356s ilv 21 TATCTGCAA.......TTCAG.................TACAAAACGTGATCA........ACCCCTCAATTT....TCCCTT......TGCT..GAAAAATTT 80 + 112. 356s lac 16 AGTTAGCTCA......CTCAT.................TAGGCACCCCAGGCT........TTACACTTTA......TGC.........TTCCG.GCTCGTATG 72 + 111. 356s male 4 TTACCGCCAA......TTCTG.................TAACAGAGA..............TCACACAAAGCGACGGTGGGGCGTAGG.GGCAA.GGAGGATGG 68 + 95.1 356s malk 22 ACACGGCTT.......CTGTGAACTAAACCGAGGTCA.TGTAAGGAA..............TTTCGTGA........TGT.........TGCTT.GCAAAAATC 85 + 109. 356s malt 50 ACAGTGCAAA......TTCAGACACA............TAAAAAAAC..............GTCATCGCT.......TGC.........ATTA..GAAAGGTTT 103 + 107. 356s ompa 30 ACAAGACTTTTTT...TTCATA................TGCCTGACGGA............GTTCACACT.......TGTAAGTT....TTCA..ACTACGTTG 89 + 113. 356s tnaa 9 ACATTAAAA.......TTCTTACGTAATTTATAATCTTTAAAAAAAGCA............TTTAATAT........TGC.........TCCCC.GAACGATTG 75 + 109. 356s uxu1 32 AACCCAATTAGAA...TTCGGGATTGACATGTCT....TACCAAAAGGTAGAACTT.....ATACGCCA........TCTC........ATCC..GATGCAAGC 105 + 101. 356s pbr322 12 ATGCGGCAT.......CAGAGCAGATTG..........TACTGAGA...............GTGCACCATA......TGCGGTGTGAAATACC..GCACAGATG 75 + 108. 356s trn9cat 11 AGATCACTT.......CGCAGAA...............TAAATAAATCCTGGT........GTCCCTGT........TGA.........TACCGGGAAGCCCTG 67 + 107. 356s tdc 47 ATAACGATA.......CTCTGGAAAG............TATTGAAA...............GTTAATTTG.......TGAGT.......GGTC..GCACATATC 100 + 107. 356s 356s ACACGGCTA TTCAG TAAAAAAA TTTCACTA TGC TGCC GCAGAATTG 356s T TCAAAT CA TT GCGCGGC GCAA TAT CT ATTA AATCGGAGT 356s T T T C A ACT C 356s 356s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 356s 14 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 37.3 356s 0 -0.100 356s 3 8 0 0 0 3 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 32.9 356s 0 -0.100 356s 12 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 29.5 356s 0 -0.100 356s 3 7 0 0 0 2 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 31.9 356s 0 -0.100 356s 2 5 0 0 0 6 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 26.4 356s 0 -0.100 356s 6 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40.1 356s 0 -0.100 356s 5 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62.9 356s 0 -0.100 356s 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 34.9 356s 0 -0.100 356s 8 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 26.2 356s 27 -51.1 356s 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 52.5 356s 0 -0.100 356s 5 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 32.4 356s 0 -0.100 356s 0 16 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75.8 356s 0 -0.100 356s 8 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 26.2 356s 0 -0.100 356s 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 38.4 356s 102 -82.2 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 64.5 356s 0 -0.100 356s 13 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39.7 356s 0 -0.100 356s 6 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 31.2 356s 0 -0.100 356s 9 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 26.2 356s 0 -0.100 356s 8 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 26.9 356s 0 -0.100 356s 13 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39.7 356s 0 -0.100 356s 11 2 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33.5 356s 0 -0.100 356s 10 6 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39.7 356s 67 -71.8 356s 2 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 30.8 356s 0 -0.100 356s 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 49.3 356s 0 -0.100 356s 5 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 29.1 356s 0 -0.100 356s 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66.8 356s 0 -0.100 356s 11 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 29.8 356s 0 -0.100 356s 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 54.3 356s 0 -0.100 356s 5 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 24.3 356s 0 -0.100 356s 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 33.0 356s 37 -57.9 356s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 64.5 356s 0 -0.100 356s 0 4 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47.7 356s 0 -0.100 356s 3 8 0 0 0 2 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 34.0 356s 42 -60.8 356s 4 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 31.4 356s 0 -0.100 356s 4 1 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 22.9 356s 0 -0.100 356s 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 68.5 356s 0 -0.100 356s 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 45.9 356s 7 -27.4 356s 4 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43.6 356s 0 -0.100 356s 6 8 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 35.2 356s 0 -0.100 356s 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 39.1 356s 0 -0.100 356s 5 6 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.3 356s 0 -0.100 356s 6 4 0 0 0 5 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 24.4 356s 0 -0.100 356s 6 2 0 0 0 5 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 22.2 356s 0 -0.100 356s 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 33.9 356s 0 -0.100 356s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 40.8 356s 0 -0.100 356s 0 5 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 31.3 356s 356s PASS 356s autopkgtest [04:11:42]: test run-unit-test: -----------------------] 357s autopkgtest [04:11:43]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 357s run-unit-test PASS 357s autopkgtest [04:11:43]: @@@@@@@@@@@@@@@@@@@@ summary 357s check-no-args PASS 357s run-unit-test PASS 374s Creating nova instance adt-noble-amd64-glam2-20240326-040546-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-amd64-server-20240325.img (UUID ba43860b-557a-4db2-b3f0-378a99bca08c)...