0s autopkgtest [00:34:44]: starting date and time: 2024-03-26 00:34:44+0000
0s autopkgtest [00:34:44]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps
0s autopkgtest [00:34:44]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.v6ttfd3e/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed --apt-upgrade cpl-plugin-giraf --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=astropy/6.0.0-1ubuntu1 cfitsio/4.3.1-1.1build1 cpl-plugin-giraf/2.16.10+dfsg-1build2 cpl/7.3.2+ds-1build2 wget/1.21.4-1ubuntu2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-89.secgroup --name adt-noble-amd64-cpl-plugin-giraf-20240326-003443-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
78s autopkgtest [00:36:02]: testbed dpkg architecture: amd64
78s autopkgtest [00:36:02]: testbed apt version: 2.7.12
78s autopkgtest [00:36:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup
79s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
79s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [7592 B]
79s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.0 kB]
79s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [497 kB]
79s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3976 kB]
79s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [484 kB]
79s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [731 kB]
79s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B]
79s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B]
79s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [37.9 kB]
79s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B]
79s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1260 kB]
79s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4390 kB]
79s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B]
79s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [28.6 kB]
79s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [96.8 kB]
79s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B]
82s Fetched 11.7 MB in 2s (7319 kB/s)
83s Reading package lists...
84s Reading package lists...
84s Building dependency tree...
84s Reading state information...
85s Calculating upgrade...
85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
85s Reading package lists...
85s Building dependency tree...
85s Reading state information...
86s 0 upgraded, 0 newly installed, 0 to remove and 248 not upgraded.
86s sh: Attempting to set up Debian/Ubuntu apt sources automatically
86s sh: Distribution appears to be Ubuntu
87s Reading package lists...
87s Building dependency tree...
87s Reading state information...
88s eatmydata is already the newest version (131-1).
88s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
88s Reading package lists...
88s Building dependency tree...
88s Reading state information...
88s dbus is already the newest version (1.14.10-4ubuntu1).
88s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
88s Reading package lists...
89s Building dependency tree...
89s Reading state information...
89s rng-tools-debian is already the newest version (2.4).
89s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
89s Reading package lists...
89s Building dependency tree...
89s Reading state information...
90s The following packages will be REMOVED:
90s cloud-init* python3-configobj* python3-debconf*
90s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
90s After this operation, 3256 kB disk space will be freed.
90s (Reading database ...
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(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71864 files and directories currently installed.)
90s Removing cloud-init (24.1.2-0ubuntu1) ...
91s Removing python3-configobj (5.0.8-3) ...
91s Removing python3-debconf (1.5.86) ...
91s Processing triggers for man-db (2.12.0-3) ...
92s (Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71475 files and directories currently installed.)
92s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ...
92s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
92s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
92s invoke-rc.d: policy-rc.d denied execution of try-restart.
92s Reading package lists...
93s Building dependency tree...
93s Reading state information...
93s linux-generic is already the newest version (6.8.0-11.11+1).
93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
93s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
93s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
93s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
96s Reading package lists...
96s Reading package lists...
96s Building dependency tree...
96s Reading state information...
96s Calculating upgrade...
96s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
96s Reading package lists...
96s Building dependency tree...
96s Reading state information...
97s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
97s autopkgtest [00:36:21]: rebooting testbed after setup commands that affected boot
273s autopkgtest [00:39:17]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024
274s autopkgtest [00:39:18]: @@@@@@@@@@@@@@@@@@@@ apt-source cpl-plugin-giraf
276s Get:1 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-giraf 2.16.10+dfsg-1build1 (dsc) [2599 B]
276s Get:2 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-giraf 2.16.10+dfsg-1build1 (tar) [751 kB]
276s Get:3 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-giraf 2.16.10+dfsg-1build1 (diff) [9912 B]
276s gpgv: Signature made Tue Jan 24 05:14:20 2023 UTC
276s gpgv: using RSA key AC483F68DE728F43F2202FCA568D30F321B2133D
276s gpgv: issuer "steve.langasek@ubuntu.com"
276s gpgv: Can't check signature: No public key
276s dpkg-source: warning: cannot verify inline signature for ./cpl-plugin-giraf_2.16.10+dfsg-1build1.dsc: no acceptable signature found
276s autopkgtest [00:39:20]: testing package cpl-plugin-giraf version 2.16.10+dfsg-1build1
276s autopkgtest [00:39:20]: build not needed
276s autopkgtest [00:39:20]: test test-recipe.py: preparing testbed
280s Reading package lists...
280s Building dependency tree...
280s Reading state information...
280s Starting pkgProblemResolver with broken count: 0
280s Starting 2 pkgProblemResolver with broken count: 0
280s Done
281s The following additional packages will be installed:
281s cpl-plugin-giraf libblas3 libcext0 libcfitsio10 libcplcore26 libcpldfs26
281s libcpldrs26 libcplui26 liberfa1 libfftw3-double3 libfftw3-single3
281s libgfortran5 libgomp1 libjs-jquery libjs-jquery-hotkeys
281s libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter
281s libjs-jquery-throttle-debounce libjs-sphinxdoc libjs-underscore liblapack3
281s libwcs8 python3-astropy python3-astropy-iers-data python3-configobj
281s python3-coverage python3-cpl python3-dateutil python3-erfa
281s python3-hypothesis python3-iniconfig python3-numpy python3-packaging
281s python3-pluggy python3-ply python3-pytest python3-pytest-arraydiff
281s python3-pytest-astropy python3-pytest-astropy-header python3-pytest-cov
281s python3-pytest-doctestplus python3-pytest-filter-subpackage
281s python3-pytest-mock python3-pytest-remotedata python3-sortedcontainers
281s Suggested packages:
281s cpl-plugin-giraf-calib cpl-plugin-giraf-doc libfftw3-bin libfftw3-dev
281s libxml2-utils python-astropy-doc python3-astropy-affiliated python3-bs4
281s python3-h5py python3-matplotlib python3-pandas python-configobj-doc
281s python-coverage-doc gdb python-hypothesis-doc gcc gfortran python3-dev
281s python-ply-doc python-pytest-mock-doc python-sortedcontainers-doc
281s Recommended packages:
281s javascript-common libjs-jquery-datatables python3-scipy python3-click
281s The following NEW packages will be installed:
281s autopkgtest-satdep cpl-plugin-giraf libblas3 libcext0 libcfitsio10
281s libcplcore26 libcpldfs26 libcpldrs26 libcplui26 liberfa1 libfftw3-double3
281s libfftw3-single3 libgfortran5 libgomp1 libjs-jquery libjs-jquery-hotkeys
281s libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter
281s libjs-jquery-throttle-debounce libjs-sphinxdoc libjs-underscore liblapack3
281s libwcs8 python3-astropy python3-astropy-iers-data python3-configobj
281s python3-coverage python3-cpl python3-dateutil python3-erfa
281s python3-hypothesis python3-iniconfig python3-numpy python3-packaging
281s python3-pluggy python3-ply python3-pytest python3-pytest-arraydiff
281s python3-pytest-astropy python3-pytest-astropy-header python3-pytest-cov
281s python3-pytest-doctestplus python3-pytest-filter-subpackage
281s python3-pytest-mock python3-pytest-remotedata python3-sortedcontainers
281s 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded.
281s Need to get 24.6 MB/24.6 MB of archives.
281s After this operation, 112 MB of additional disk space will be used.
281s Get:1 /tmp/autopkgtest.SgnO7M/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [728 B]
281s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
281s Get:3 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2ubuntu2 [11.5 kB]
281s Get:4 http://ftpmaster.internal/ubuntu noble/universe amd64 libcext0 amd64 7.3.2+ds-1build1 [32.2 kB]
281s Get:5 http://ftpmaster.internal/ubuntu noble/universe amd64 libcfitsio10 amd64 4.3.1-1 [528 kB]
281s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB]
281s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libfftw3-double3 amd64 3.3.10-1ubuntu1 [835 kB]
281s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libfftw3-single3 amd64 3.3.10-1ubuntu1 [869 kB]
281s Get:9 http://ftpmaster.internal/ubuntu noble/universe amd64 libcplcore26 amd64 7.3.2+ds-1build1 [489 kB]
281s Get:10 http://ftpmaster.internal/ubuntu noble/universe amd64 libcplui26 amd64 7.3.2+ds-1build1 [39.3 kB]
281s Get:11 http://ftpmaster.internal/ubuntu noble/universe amd64 libcpldfs26 amd64 7.3.2+ds-1build1 [41.1 kB]
281s Get:12 http://ftpmaster.internal/ubuntu noble/universe amd64 libwcs8 amd64 8.2.2+ds-3 [310 kB]
281s Get:13 http://ftpmaster.internal/ubuntu noble/universe amd64 libcpldrs26 amd64 7.3.2+ds-1build1 [67.2 kB]
281s Get:14 http://ftpmaster.internal/ubuntu noble/universe amd64 cpl-plugin-giraf amd64 2.16.10+dfsg-1build1 [395 kB]
281s Get:15 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB]
281s Get:16 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB]
281s Get:17 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-metadata all 12-4 [6582 B]
281s Get:18 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [193 kB]
281s Get:19 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB]
281s Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB]
281s Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-sphinxdoc all 7.2.6-4 [149 kB]
281s Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB]
281s Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 python3-configobj all 5.0.8-3 [33.8 kB]
281s Get:24 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B]
281s Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 python3-packaging all 23.2-1 [40.6 kB]
281s Get:26 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pluggy all 1.4.0-1 [20.4 kB]
281s Get:27 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest all 7.4.4-1 [305 kB]
281s Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 python3-dateutil all 2.8.2-3 [79.2 kB]
281s Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 python3-sortedcontainers all 2.4.0-2 [27.6 kB]
281s Get:30 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-hypothesis all 6.92.2-1 [371 kB]
281s Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 python3-numpy amd64 1:1.24.2-2 [7141 kB]
281s Get:32 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest-arraydiff all 0.6.1-2 [10.2 kB]
281s Get:33 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest-astropy-header all 0.2.2-1 [8190 B]
281s Get:34 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-coverage amd64 7.3.2-0ubuntu1 [146 kB]
281s Get:35 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B]
281s Get:36 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest-cov all 4.1.0-1 [21.5 kB]
281s Get:37 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest-doctestplus all 1.2.0-1 [23.1 kB]
281s Get:38 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest-filter-subpackage all 0.2.0-1 [6094 B]
281s Get:39 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest-mock all 3.12.0-1.1 [11.3 kB]
281s Get:40 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest-remotedata all 0.4.1-1 [8650 B]
281s Get:41 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pytest-astropy all 0.11.0-1 [5902 B]
281s Get:42 http://ftpmaster.internal/ubuntu noble/main amd64 python3-ply all 3.11-6 [46.5 kB]
281s Get:43 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-astropy-iers-data all 0.2024.01.01.00.33.39-1 [2046 kB]
281s Get:44 http://ftpmaster.internal/ubuntu noble/universe amd64 liberfa1 amd64 2.0.1-1 [139 kB]
281s Get:45 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-erfa amd64 2.0.1.1+ds-3 [313 kB]
281s Get:46 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-astropy amd64 6.0.0-1 [5335 kB]
281s Get:47 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-cpl amd64 0.7.4-2build9 [37.1 kB]
282s Fetched 24.6 MB in 0s (75.7 MB/s)
282s Selecting previously unselected package libjs-jquery.
282s (Reading database ...
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 71420 files and directories currently installed.)
282s Preparing to unpack .../00-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
282s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
282s Selecting previously unselected package libjs-jquery-hotkeys.
282s Preparing to unpack .../01-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2ubuntu2_all.deb ...
282s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2ubuntu2) ...
282s Selecting previously unselected package libcext0:amd64.
282s Preparing to unpack .../02-libcext0_7.3.2+ds-1build1_amd64.deb ...
282s Unpacking libcext0:amd64 (7.3.2+ds-1build1) ...
282s Selecting previously unselected package libcfitsio10:amd64.
282s Preparing to unpack .../03-libcfitsio10_4.3.1-1_amd64.deb ...
282s Unpacking libcfitsio10:amd64 (4.3.1-1) ...
282s Selecting previously unselected package libgomp1:amd64.
282s Preparing to unpack .../04-libgomp1_14-20240303-1ubuntu1_amd64.deb ...
282s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ...
282s Selecting previously unselected package libfftw3-double3:amd64.
282s Preparing to unpack .../05-libfftw3-double3_3.3.10-1ubuntu1_amd64.deb ...
282s Unpacking libfftw3-double3:amd64 (3.3.10-1ubuntu1) ...
282s Selecting previously unselected package libfftw3-single3:amd64.
282s Preparing to unpack .../06-libfftw3-single3_3.3.10-1ubuntu1_amd64.deb ...
282s Unpacking libfftw3-single3:amd64 (3.3.10-1ubuntu1) ...
282s Selecting previously unselected package libcplcore26:amd64.
282s Preparing to unpack .../07-libcplcore26_7.3.2+ds-1build1_amd64.deb ...
282s Unpacking libcplcore26:amd64 (7.3.2+ds-1build1) ...
282s Selecting previously unselected package libcplui26:amd64.
282s Preparing to unpack .../08-libcplui26_7.3.2+ds-1build1_amd64.deb ...
282s Unpacking libcplui26:amd64 (7.3.2+ds-1build1) ...
282s Selecting previously unselected package libcpldfs26:amd64.
282s Preparing to unpack .../09-libcpldfs26_7.3.2+ds-1build1_amd64.deb ...
282s Unpacking libcpldfs26:amd64 (7.3.2+ds-1build1) ...
282s Selecting previously unselected package libwcs8:amd64.
282s Preparing to unpack .../10-libwcs8_8.2.2+ds-3_amd64.deb ...
282s Unpacking libwcs8:amd64 (8.2.2+ds-3) ...
282s Selecting previously unselected package libcpldrs26:amd64.
282s Preparing to unpack .../11-libcpldrs26_7.3.2+ds-1build1_amd64.deb ...
282s Unpacking libcpldrs26:amd64 (7.3.2+ds-1build1) ...
282s Selecting previously unselected package cpl-plugin-giraf:amd64.
282s Preparing to unpack .../12-cpl-plugin-giraf_2.16.10+dfsg-1build1_amd64.deb ...
282s Unpacking cpl-plugin-giraf:amd64 (2.16.10+dfsg-1build1) ...
282s Selecting previously unselected package libblas3:amd64.
282s Preparing to unpack .../13-libblas3_3.12.0-3_amd64.deb ...
282s Unpacking libblas3:amd64 (3.12.0-3) ...
282s Selecting previously unselected package libgfortran5:amd64.
282s Preparing to unpack .../14-libgfortran5_14-20240303-1ubuntu1_amd64.deb ...
282s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ...
282s Selecting previously unselected package libjs-jquery-metadata.
282s Preparing to unpack .../15-libjs-jquery-metadata_12-4_all.deb ...
282s Unpacking libjs-jquery-metadata (12-4) ...
282s Selecting previously unselected package libjs-jquery-tablesorter.
282s Preparing to unpack .../16-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-3_all.deb ...
282s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ...
282s Selecting previously unselected package libjs-jquery-throttle-debounce.
282s Preparing to unpack .../17-libjs-jquery-throttle-debounce_1.1+dfsg.1-2_all.deb ...
282s Unpacking libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ...
282s Selecting previously unselected package libjs-underscore.
282s Preparing to unpack .../18-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ...
282s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
282s Selecting previously unselected package libjs-sphinxdoc.
282s Preparing to unpack .../19-libjs-sphinxdoc_7.2.6-4_all.deb ...
282s Unpacking libjs-sphinxdoc (7.2.6-4) ...
282s Selecting previously unselected package liblapack3:amd64.
283s Preparing to unpack .../20-liblapack3_3.12.0-3_amd64.deb ...
283s Unpacking liblapack3:amd64 (3.12.0-3) ...
283s Selecting previously unselected package python3-configobj.
283s Preparing to unpack .../21-python3-configobj_5.0.8-3_all.deb ...
283s Unpacking python3-configobj (5.0.8-3) ...
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295s autopkgtest [00:39:39]: test test-recipe.py: [-----------------------
295s Recipe gimasterflat:
295s version 2.16.10
295s Parameters: {'fiber-splist': '', 'fiber-nspec': 0, 'remove-bias': True, 'bsremove-method': 'PROFILE', 'bsremove-areas': '5:40:0:4095', 'bsremove-sigma': 2.5, 'bsremove-niter': 5, 'bsremove-mfrac': 0.8, 'bsremove-xorder': 1, 'bsremove-yorder': 1, 'bsremove-xstep': 1, 'bsremove-ystep': 1, 'sloc-mode': 'all', 'sloc-start': -1, 'sloc-retries': 10, 'sloc-binsize': -1, 'sloc-ewidth': 1.0, 'sloc-ywidth': -1, 'sloc-center': 'centroid', 'sloc-norm': False, 'sloc-noise': 7.0, 'sloc-threshold': 'local', 'sloc-ron': -1.0, 'sloc-yorder': 4, 'sloc-worder': 2, 'sloc-sigma': 2.5, 'sloc-niter': 5, 'sloc-mfrac': 0.9, 'psf-model': 'psfexp2', 'psf-norm': False, 'psf-binsize': 64, 'psf-maxwidth': 16.0, 'psf-width': 0.0, 'psf-exponent': -3.0, 'psf-pfniter': 120, 'psf-pfntest': 7, 'psf-pfdchisq': 0.001, 'psf-prmfit': False, 'psf-yorder': 4, 'psf-worder': 4, 'psf-sigma': 3.5, 'psf-niter': 10, 'psf-mfrac': 0.8, 'extr-method': 'SUM', 'extr-ron': -1.0, 'extr-psfmodel': 'psfexp2', 'extr-psfsigma': 7.0, 'extr-psfniter': 2, 'extr-hewidth': 2, 'extr-hmingood': 3, 'extr-omfrac': 0.9, 'extr-owfactor': 3.0, 'extr-obkgorder': 2, 'transmission': True, 'slight': False, 'slight-model': 'polynom', 'slight-order': '4,2', 'slight-xstep': 10, 'slight-ystep': 1, 'slight-xslice': 'none', 'slight-ewidth': 0.5, 'slight-iswidth': 2, 'slight-istrim': True, 'slight-phff': False, 'slight-remove': False}
295s Docstring: Create the fiber master flat field and the localization mask.
295s
295s For detailed information please refer to the GIRAFFE pipeline user
295s manual. It is available at http://www.eso.org/pipelines.
295s
295s Parameters:
295s fiber-splist: Index list of spectra to use for localization (e.g.
295s 2,10,30-40,55). (str; default: '')
295s fiber-nspec: Number of spectra to localize. (int; default: 0)
295s remove-bias: Enable bias removal (bool; default: True)
295s bsremove-method: Bias removal method (str; default: 'PROFILE')
295s bsremove-areas: Bias areas to use (Xl0:Xr0:Yl0:Yr0, ...
295s ,Xln:Xrn:Yln:Yrn) (str; default: '5:40:0:4095')
295s bsremove-sigma: Sigma Clipping: sigma threshold factor (float;
295s default: 2.5)
295s bsremove-niter: Sigma Clipping: maximum number of iterations (int;
295s default: 5)
295s bsremove-mfrac: Sigma Clipping: minimum fraction of points
295s accepted/total [0.0..1.0] (float; default: 0.8)
295s bsremove-xorder: Order of X polynomial fit (CURVE method only) (int;
295s default: 1)
295s bsremove-yorder: Order of Y polynomial fit (CURVE method only) (int;
295s default: 1)
295s bsremove-xstep: Sampling step along X (CURVE method only) (int;
295s default: 1)
295s bsremove-ystep: Sampling step along Y (CURVE method only) (int;
295s default: 1)
295s sloc-mode: Localization mode: Use all spectra or the 5 SIWC
295s spectra (str; default: 'all')
295s sloc-start: Bin along x-axis (int; default: -1)
295s sloc-retries: Initial localization detection xbin retries. (int;
295s default: 10)
295s sloc-binsize: Initial localization detection xbin size. (int;
295s default: -1)
295s sloc-ewidth: Localization detection extra width. (float; default:
295s 1.0)
295s sloc-ywidth: Full width [pxl] of the equilizing filter (distance
295s between two adjacent fibers). (int; default: -1)
295s sloc-center: Method used for mask center computation. (str;
295s default: 'centroid')
295s sloc-norm: Enable spectrum normalization along the dispersion
295s axis. (bool; default: False)
295s sloc-noise: Threshold multiplier. (float; default: 7.0)
295s sloc-threshold: Selects thresholding algorithm: local, row or global
295s (str; default: 'local')
295s sloc-ron: New bias sigma (RON) value for dark subtraction
295s (float; default: -1.0)
295s sloc-yorder: Order of Chebyshev polynomial fit. (int; default: 4)
295s sloc-worder: Order of Chebyshev 2D polynomial fit. (int; default:
295s 2)
295s sloc-sigma: Localization clipping: sigma threshold factor
295s (float; default: 2.5)
295s sloc-niter: Localization clipping: number of iterations (int;
295s default: 5)
295s sloc-mfrac: Localization clipping: minimum fraction of points
295s accepted/total. (float; default: 0.9)
295s psf-model: PSF profile model: `psfexp', `psfexp2' (str;
295s default: 'psfexp2')
295s psf-norm: Use normalized pixel values. (bool; default: False)
295s psf-binsize: Size of bin along dispersion axis (int; default: 64)
295s psf-maxwidth: Maximum width of the PSF profile. (float; default:
295s 16.0)
295s psf-width: Initial width of the PSF profile. (float; default:
295s 0.0)
295s psf-exponent: Exponent of the exponential PSF profile (will not be
295s fitted if > 0). (float; default: -3.0)
295s psf-pfniter: Maximum number of iterations used for the fit of the
295s fiber PSF profile. (int; default: 120)
295s psf-pfntest: Maximum number of tests used for the fit of the
295s fiber PSF profile (int; default: 7)
295s psf-pfdchisq: Minimum chi-square difference used for the fit of
295s the fiber PSF profile. (float; default: 0.001)
295s psf-prmfit: 2D fit of the PSF profile parameters using a
295s Chebyshev polynomial model. (bool; default: False)
295s psf-yorder: Order of Chebyshev polynomial fit. (int; default: 4)
295s psf-worder: Order of Chebyshev 2D polynomial fit. (int; default:
295s 4)
295s psf-sigma: PSF parameter fitting: sigma threshold factor
295s (float; default: 3.5)
295s psf-niter: PSF parameter fitting: number of iterations (int;
295s default: 10)
295s psf-mfrac: PSF parameter fitting: minimum fraction of points
295s accepted/total. (float; default: 0.8)
295s extr-method: Extraction method: 'SUM', 'HORNE' or 'OPTIMAL' (str;
295s default: 'SUM')
295s extr-ron: New bias sigma (RON) value for bias and dark
295s corrected image (float; default: -1.0)
295s extr-psfmodel: PSF profile model: `psfexp', `psfexp2' (str;
295s default: 'psfexp2')
295s extr-psfsigma: Sigma clippging threshold used for rejecting data
295s points during PSF fitting (Horne's sigma). It is
295s used to reject bad pixels and cosmics. (float;
295s default: 7.0)
295s extr-psfniter: Maximum number of iterations used for fitting the
295s PSF profile. (int; default: 2)
295s extr-hewidth: Horne extraction method: Number of extra pixels
295s added to the fiber half-width. (int; default: 2)
295s extr-hmingood: Horne extraction method: Minimum number of points
295s used for the profile fit. It sets the lower limit of
295s data points for the pixel rejection. (int; default:
295s 3)
295s extr-omfrac: Optimal extraction method: Minimum fraction of the
295s data points used for fitting the fiber profiles. It
295s sets the lower limit for the pixel rejection.
295s (float; default: 0.9)
295s extr-owfactor: Optimal extraction method: Factor by which the fiber
295s PSF half width is multiplied. Adjacent spectra
295s within this area are assumed to affect the spectrum
295s being extracted. (float; default: 3.0)
295s extr-obkgorder: Optimal extraction method: Order of the polynomial
295s background model, which is fitted for each
295s wavelength bin along the spatial direction. (int;
295s default: 2)
295s transmission: Controls the relative fiber transmission
295s computation. (bool; default: True)
295s slight: Controls the scattered light model computation.
295s (bool; default: False)
295s slight-model: Name of the scattered light model to use. (str;
295s default: 'polynom')
295s slight-order: Scattered light model fit X and Y order. (str;
295s default: '4,2')
295s slight-xstep: Interspectrum region sampling step along the
295s dispersion direction. (int; default: 10)
295s slight-ystep: Interspectrum region sampling step along the spatial
295s direction. (int; default: 1)
295s slight-xslice: Interspectrum region sampling step along the
295s dispersion direction for a specific region. This
295s overrides 'xstep' for the given region. (str;
295s default: 'none')
295s slight-ewidth: Extra width [pixels] added to both sides of a
295s spectrum trace. (float; default: 0.5)
295s slight-iswidth: Minimum width [pixels] required for interspectrum
295s regions. (int; default: 2)
295s slight-istrim: Turn off using the first and last interspectrum
295s region. (bool; default: True)
295s slight-phff: Use photometric flat field correction. (bool;
295s default: False)
295s slight-remove: Remove scattered light from the input frame. (bool;
295s default: False)
295s Author: Giraffe Pipeline
295s
295s
295s Recipe giframestack:
295s version 2.16.10
295s Parameters: {'stack-method': 'average', 'stack-ksigmalow': 5.0, 'stack-ksigmahigh': 5.0, 'stack-minreject': 1, 'stack-maxreject': 1}
295s Docstring: Creates a stacked image from a set of raw images.
295s
295s TBD
295s
295s Parameters:
295s stack-method: Stacking method: average, median, minmax or ksigma
295s (str; default: 'average')
295s stack-ksigmalow: Lower threshold multiplier for method ksigma
295s (float; default: 5.0)
295s stack-ksigmahigh: Upper threshold multiplier for method ksigma
295s (float; default: 5.0)
295s stack-minreject: Minimum rejection level for method minmax (int;
295s default: 1)
295s stack-maxreject: Maximum rejection level for method minmax (int;
295s default: 1)
295s Author: Giraffe Pipeline
295s
295s
295s Recipe gimasterbias:
295s version 2.16.10
295s Parameters: {'stack-method': 'average', 'stack-ksigmalow': 5.0, 'stack-ksigmahigh': 5.0, 'stack-minreject': 1, 'stack-maxreject': 1, 'mbias-oscremove': False, 'mbias-bpxclean': False, 'bpm-create': True, 'bpm-factor': 5.0, 'bpm-frac': 0.15}
295s Docstring: Creates a master bias image from a set of raw biases.
295s
295s For detailed information please refer to the GIRAFFE pipeline user
295s manual. It is available at http://www.eso.org/pipelines.
295s
295s Parameters:
295s stack-method: Stacking method: average, median, minmax or ksigma
295s (str; default: 'average')
295s stack-ksigmalow: Lower threshold multiplier for method ksigma
295s (float; default: 5.0)
295s stack-ksigmahigh: Upper threshold multiplier for method ksigma
295s (float; default: 5.0)
295s stack-minreject: Minimum rejection level for method minmax (int;
295s default: 1)
295s stack-maxreject: Maximum rejection level for method minmax (int;
295s default: 1)
295s mbias-oscremove: Remove pre- and over-scan regions from the created
295s master bias image. (bool; default: False)
295s mbias-bpxclean: Correct master bias image for bad pixels (bool;
295s default: False)
295s bpm-create: Create bad pixel map using a simple thresholding
295s algorithm. (temporary!) (bool; default: True)
295s bpm-factor: Readout noise multiplier defining the valid range
295s of pixel values for searching bad pixels. (float;
295s default: 5.0)
295s bpm-frac: Maximum fraction of pixels which may be flagged as
295s 'bad. If more pixels are found to be 'bad a warning
295s is issued. (float; default: 0.15)
295s Author: Giraffe Pipeline
295s
295s
295s Recipe giwavecalibration:
295s version 2.16.10
295s Parameters: {'remove-bias': True, 'bsremove-method': 'PROFILE', 'bsremove-areas': '5:40:0:4095', 'bsremove-sigma': 2.5, 'bsremove-niter': 5, 'bsremove-mfrac': 0.8, 'bsremove-xorder': 1, 'bsremove-yorder': 1, 'bsremove-xstep': 1, 'bsremove-ystep': 1, 'extr-method': 'SUM', 'extr-ron': -1.0, 'extr-psfmodel': 'psfexp2', 'extr-psfsigma': 7.0, 'extr-psfniter': 2, 'extr-hewidth': 2, 'extr-hmingood': 3, 'extr-omfrac': 0.9, 'extr-owfactor': 3.0, 'extr-obkgorder': 2, 'wcal-lswidth': '10,10,10,10,10', 'wcal-lssep': 0.9, 'wcal-lsfxratio': 50.0, 'wcal-lsbright': 0.0, 'wcal-lscount': -80, 'wcal-lswrange': '0.,0.', 'wcal-lfmodel': 'psfexp', 'wcal-lfres': 'auto', 'wcal-lfthreshold': 1.0, 'wcal-lfoffset': 10.0, 'wcal-lfniter': 50, 'wcal-lfntest': 7, 'wcal-lfdchisq': 0.0001, 'wcal-lfreswid': 0.5, 'wcal-lfexpwid': -3.0, 'wcal-soffset': 'setup', 'wcal-ommodel': 'xoptmod2', 'wcal-omdir': 1, 'wcal-omsol': True, 'wcal-omflags': 'sdx,sdy,sphi', 'wcal-omsslits': False, 'wcal-omniter': 50, 'wcal-omntest': 7, 'wcal-omdchisq': 0.0001, 'wcal-xwsigma': 1.25, 'wcal-xwniter': 10, 'wcal-xwmfrac': 0.9, 'wcal-xworder': '2,2', 'wcal-wssigma': 150.0, 'wcal-wsniter': 10, 'wcal-wsmfrac': 0.9, 'wcal-wsorder': '6,4', 'wcal-rebin': True, 'rbin-method': 'linear', 'rbin-xresid': True, 'rbin-lstep': 0.005, 'rbin-scmethod': 'linear', 'rbin-size': 0, 'rbin-range': 'setup', 'wcal-slit': False, 'scal-cniter': 1, 'scal-zmax': 10000.0, 'scal-cstep': -0.005, 'scal-cdomain': '0.,0.', 'scal-rvlimits': '-200.,200.', 'scal-rvniter': 3, 'scal-rvwfactor': 1.5, 'scal-pfniter': 50, 'scal-pfntest': 7, 'scal-pfdchisq': 0.0001}
295s Docstring: Compute dispersion solution from an arc-lamp spectrum.
295s
295s For detailed information please refer to the GIRAFFE pipeline user
295s manual. It is available at http://www.eso.org/pipelines.
295s
295s Parameters:
295s remove-bias: Enable bias removal (bool; default: True)
295s bsremove-method: Bias removal method (str; default: 'PROFILE')
295s bsremove-areas: Bias areas to use (Xl0:Xr0:Yl0:Yr0, ...
295s ,Xln:Xrn:Yln:Yrn) (str; default: '5:40:0:4095')
295s bsremove-sigma: Sigma Clipping: sigma threshold factor (float;
295s default: 2.5)
295s bsremove-niter: Sigma Clipping: maximum number of iterations (int;
295s default: 5)
295s bsremove-mfrac: Sigma Clipping: minimum fraction of points
295s accepted/total [0.0..1.0] (float; default: 0.8)
295s bsremove-xorder: Order of X polynomial fit (CURVE method only) (int;
295s default: 1)
295s bsremove-yorder: Order of Y polynomial fit (CURVE method only) (int;
295s default: 1)
295s bsremove-xstep: Sampling step along X (CURVE method only) (int;
295s default: 1)
295s bsremove-ystep: Sampling step along Y (CURVE method only) (int;
295s default: 1)
295s extr-method: Extraction method: 'SUM', 'HORNE' or 'OPTIMAL'
295s (str; default: 'SUM')
295s extr-ron: New bias sigma (RON) value for bias and dark
295s corrected image (float; default: -1.0)
295s extr-psfmodel: PSF profile model: `psfexp', `psfexp2' (str;
295s default: 'psfexp2')
295s extr-psfsigma: Sigma clippging threshold used for rejecting data
295s points during PSF fitting (Horne's sigma). It is
295s used to reject bad pixels and cosmics. (float;
295s default: 7.0)
295s extr-psfniter: Maximum number of iterations used for fitting the
295s PSF profile. (int; default: 2)
295s extr-hewidth: Horne extraction method: Number of extra pixels
295s added to the fiber half-width. (int; default: 2)
295s extr-hmingood: Horne extraction method: Minimum number of points
295s used for the profile fit. It sets the lower limit
295s of data points for the pixel rejection. (int;
295s default: 3)
295s extr-omfrac: Optimal extraction method: Minimum fraction of the
295s data points used for fitting the fiber profiles. It
295s sets the lower limit for the pixel rejection.
295s (float; default: 0.9)
295s extr-owfactor: Optimal extraction method: Factor by which the
295s fiber PSF half width is multiplied. Adjacent
295s spectra within this area are assumed to affect the
295s spectrum being extracted. (float; default: 3.0)
295s extr-obkgorder: Optimal extraction method: Order of the polynomial
295s background model, which is fitted for each
295s wavelength bin along the spatial direction. (int;
295s default: 2)
295s wcal-lswidth: List of window widths [pxl] used for line detection
295s and fit (e.g. '60,40,15'). (str; default:
295s '10,10,10,10,10')
295s wcal-lssep: Factor used to compute the minimum line separation
295s from the window width. (float; default: 0.9)
295s wcal-lsfxratio: Selects only lines whose neighbours have a relative
295s intensity less than 1. / fluxratio. (float;
295s default: 50.0)
295s wcal-lsbright: Selects lines having an intensity greater or equal
295s to the given intensity. (float; default: 0.0)
295s wcal-lscount: Sets the minimum number of lines to select;
295s selected are lines with the highest nominal
295s intensity. A value of 0 turns this selection off.
295s If the value is less than 0 the selection is
295s skipped if the line list does not contain enough
295s lines. (int; default: -80)
295s wcal-lswrange: Selects only lines within the given wavelength
295s range [nm]. (str; default: '0.,0.')
295s wcal-lfmodel: Line profile model. (str; default: 'psfexp')
295s wcal-lfres: Use optical model residuals for line detection.
295s (str; default: 'auto')
295s wcal-lfthreshold: Line detection threshold during the line fitting
295s (multiple of bias sigma) (float; default: 1.0)
295s wcal-lfoffset: Maximum allowed difference between the fitted and
295s raw line peak position. (float; default: 10.0)
295s wcal-lfniter: Line detection fit maximum number of iterations.
295s (int; default: 50)
295s wcal-lfntest: Line detection fit maximum number of tests. (int;
295s default: 7)
295s wcal-lfdchisq: Line detection fit minimum chi-square difference.
295s (float; default: 0.0001)
295s wcal-lfreswid: Line width/resolution width factor. (float;
295s default: 0.5)
295s wcal-lfexpwid: Exponential line profile exponent; it will not be
295s fitted if it is larger than 0. (float; default:
295s -3.0)
295s wcal-soffset: Initial slit position offsets along the x and y
295s direction and rotation angle. (str; default:
295s 'setup')
295s wcal-ommodel: Optical model. (str; default: 'xoptmod2')
295s wcal-omdir: Dispersion direction flag. (int; default: 1)
295s wcal-omsol: Controls optical model parameter fitting. (bool;
295s default: True)
295s wcal-omflags: List of flags defining the set of free parameters
295s used for fitting the optical model. Possible values
295s are: fcoll, gcam, theta, sdx, sdy, sphi (str;
295s default: 'sdx,sdy,sphi')
295s wcal-omsslits: Controls subslit geometry usage in the optical
295s model fit; subslits are used if set to `true'.
295s (bool; default: False)
295s wcal-omniter: Optical model fit maximum number of iterations.
295s (int; default: 50)
295s wcal-omntest: Optical model fit maximum number of tests (int;
295s default: 7)
295s wcal-omdchisq: Optical model fit minimum chi-square difference.
295s (float; default: 0.0001)
295s wcal-xwsigma: PSF width fit sigma clipping factor. (float;
295s default: 1.25)
295s wcal-xwniter: PSF width fit sigma clipping maximum number of
295s iterations. (int; default: 10)
295s wcal-xwmfrac: PSF width fit sigma clipping minimum fraction of
295s points accepted/total. (float; default: 0.9)
295s wcal-xworder: X and Y polynomial orders for PSF x-width Chebyshev
295s fit. (str; default: '2,2')
295s wcal-wssigma: Chebyshev correction sigma clipping factor. (float;
295s default: 150.0)
295s wcal-wsniter: Chebyshev correction sigma clipping maximum number
295s of iterations (int; default: 10)
295s wcal-wsmfrac: Chebyshev correction sigma clipping minimum
295s fraction of points accepted/total. (float; default:
295s 0.9)
295s wcal-wsorder: X and Y polynomial orders for the wavelength
295s solution Chebyshev correction. (str; default:
295s '6,4')
295s wcal-rebin: Rebin extracted arc-lamp spectra. (bool; default:
295s True)
295s rbin-method: Method to use : `linear' or `spline' (str; default:
295s 'linear')
295s rbin-xresid: Use x residuals during rebinning? `true'/`false'
295s (bool; default: True)
295s rbin-lstep: Lambda step size, only used if scaling method is
295s 'linear' (float; default: 0.005)
295s rbin-scmethod: Scaling method: `log' or `linear' (str; default:
295s 'linear')
295s rbin-size: Size of output rebinned spectra, 0 means calculate
295s size based on wavelength range and lambda stepsize
295s (int; default: 0)
295s rbin-range: Rebinning range: `setup' or `common' (str; default:
295s 'setup')
295s wcal-slit: Controls the slit geometry calibration. (bool;
295s default: False)
295s scal-cniter: Slit geometry calibration maximum number of
295s iterations. (int; default: 1)
295s scal-zmax: Maximum allowed pixel value. To be effective it
295s must be larger than 0. (float; default: 10000.0)
295s scal-cstep: Cross-correlation step. (float; default: -0.005)
295s scal-cdomain: Restricts the cross-correlation to the given
295s domain. (str; default: '0.,0.')
295s scal-rvlimits: Delta RV limits of the cross-correlation window in
295s km/s. (str; default: '-200.,200.')
295s scal-rvniter: Maximum number of iterations used for the RV
295s determination. (int; default: 3)
295s scal-rvwfactor: Data window width factor. The FWHM times this value
295s determines the window width. (float; default: 1.5)
295s scal-pfniter: Peak model fit maximum number of iterations. (int;
295s default: 50)
295s scal-pfntest: Cross-correlation peak fit maximum number of tests
295s (int; default: 7)
295s scal-pfdchisq: Cross-correlation peak fit minimum chi-square
295s difference. (float; default: 0.0001)
295s Author: Giraffe Pipeline
295s
295s
295s Recipe gimasterdark:
295s version 2.16.10
295s Parameters: {'stack-method': 'median', 'stack-ksigmalow': 5.0, 'stack-ksigmahigh': 5.0, 'stack-minreject': 1, 'stack-maxreject': 1, 'remove-bias': True, 'bsremove-method': 'PROFILE', 'bsremove-areas': '5:40:0:4095', 'bsremove-sigma': 2.5, 'bsremove-niter': 5, 'bsremove-mfrac': 0.8, 'bsremove-xorder': 1, 'bsremove-yorder': 1, 'bsremove-xstep': 1, 'bsremove-ystep': 1}
295s Docstring: Creates a master dark image from a set of raw dark frames.
295s
295s For detailed information please refer to the GIRAFFE pipeline user
295s manual. It is available at http://www.eso.org/pipelines.
295s
295s Parameters:
295s stack-method: Stacking method: average, median, minmax or ksigma
295s (str; default: 'median')
295s stack-ksigmalow: Lower threshold multiplier for method ksigma
295s (float; default: 5.0)
295s stack-ksigmahigh: Upper threshold multiplier for method ksigma
295s (float; default: 5.0)
295s stack-minreject: Minimum rejection level for method minmax (int;
295s default: 1)
295s stack-maxreject: Maximum rejection level for method minmax (int;
295s default: 1)
295s remove-bias: Enable bias removal (bool; default: True)
295s bsremove-method: Bias removal method (str; default: 'PROFILE')
295s bsremove-areas: Bias areas to use (Xl0:Xr0:Yl0:Yr0, ...
295s ,Xln:Xrn:Yln:Yrn) (str; default: '5:40:0:4095')
295s bsremove-sigma: Sigma Clipping: sigma threshold factor (float;
295s default: 2.5)
295s bsremove-niter: Sigma Clipping: maximum number of iterations (int;
295s default: 5)
295s bsremove-mfrac: Sigma Clipping: minimum fraction of points
295s accepted/total [0.0..1.0] (float; default: 0.8)
295s bsremove-xorder: Order of X polynomial fit (CURVE method only) (int;
295s default: 1)
295s bsremove-yorder: Order of Y polynomial fit (CURVE method only) (int;
295s default: 1)
295s bsremove-xstep: Sampling step along X (CURVE method only) (int;
295s default: 1)
295s bsremove-ystep: Sampling step along Y (CURVE method only) (int;
295s default: 1)
295s Author: Giraffe Pipeline
295s
295s
295s Recipe gistandard:
295s version 2.16.10
295s Parameters: {'remove-bias': True, 'bsremove-method': 'PROFILE', 'bsremove-areas': '5:40:0:4095', 'bsremove-sigma': 2.5, 'bsremove-niter': 5, 'bsremove-mfrac': 0.8, 'bsremove-xorder': 1, 'bsremove-yorder': 1, 'bsremove-xstep': 1, 'bsremove-ystep': 1, 'extr-method': 'SUM', 'extr-ron': -1.0, 'extr-psfmodel': 'psfexp2', 'extr-psfsigma': 7.0, 'extr-psfniter': 2, 'extr-hewidth': 2, 'extr-hmingood': 3, 'extr-omfrac': 0.9, 'extr-owfactor': 3.0, 'extr-obkgorder': 2, 'flat-apply': False, 'transmission-apply': False, 'rbin-method': 'linear', 'rbin-xresid': True, 'rbin-lstep': 0.005, 'rbin-scmethod': 'linear', 'rbin-size': 0, 'rbin-range': 'common', 'recon-min': 0.0, 'recon-max': 0.0, 'recon-cube': True, 'recon-format': 'single', 'flx-skycorr': False, 'max-dist': 60.0}
295s Docstring: Process a spectro-photometric standard star observation and compute
295s the instrument response curve.
295s
295s For detailed information please refer to the GIRAFFE pipeline user
295s manual. It is available at http://www.eso.org/pipelines.
295s
295s Parameters:
295s remove-bias: Enable bias removal (bool; default: True)
295s bsremove-method: Bias removal method (str; default: 'PROFILE')
295s bsremove-areas: Bias areas to use (Xl0:Xr0:Yl0:Yr0, ...
295s ,Xln:Xrn:Yln:Yrn) (str; default: '5:40:0:4095')
295s bsremove-sigma: Sigma Clipping: sigma threshold factor (float;
295s default: 2.5)
295s bsremove-niter: Sigma Clipping: maximum number of iterations
295s (int; default: 5)
295s bsremove-mfrac: Sigma Clipping: minimum fraction of points
295s accepted/total [0.0..1.0] (float; default: 0.8)
295s bsremove-xorder: Order of X polynomial fit (CURVE method only)
295s (int; default: 1)
295s bsremove-yorder: Order of Y polynomial fit (CURVE method only)
295s (int; default: 1)
295s bsremove-xstep: Sampling step along X (CURVE method only) (int;
295s default: 1)
295s bsremove-ystep: Sampling step along Y (CURVE method only) (int;
295s default: 1)
295s extr-method: Extraction method: 'SUM', 'HORNE' or 'OPTIMAL'
295s (str; default: 'SUM')
295s extr-ron: New bias sigma (RON) value for bias and dark
295s corrected image (float; default: -1.0)
295s extr-psfmodel: PSF profile model: `psfexp', `psfexp2' (str;
295s default: 'psfexp2')
295s extr-psfsigma: Sigma clippging threshold used for rejecting data
295s points during PSF fitting (Horne's sigma). It is
295s used to reject bad pixels and cosmics. (float;
295s default: 7.0)
295s extr-psfniter: Maximum number of iterations used for fitting the
295s PSF profile. (int; default: 2)
295s extr-hewidth: Horne extraction method: Number of extra pixels
295s added to the fiber half-width. (int; default: 2)
295s extr-hmingood: Horne extraction method: Minimum number of points
295s used for the profile fit. It sets the lower limit
295s of data points for the pixel rejection. (int;
295s default: 3)
295s extr-omfrac: Optimal extraction method: Minimum fraction of
295s the data points used for fitting the fiber
295s profiles. It sets the lower limit for the pixel
295s rejection. (float; default: 0.9)
295s extr-owfactor: Optimal extraction method: Factor by which the
295s fiber PSF half width is multiplied. Adjacent
295s spectra within this area are assumed to affect
295s the spectrum being extracted. (float; default:
295s 3.0)
295s extr-obkgorder: Optimal extraction method: Order of the
295s polynomial background model, which is fitted for
295s each wavelength bin along the spatial direction.
295s (int; default: 2)
295s flat-apply: Controls the flat field correction. (bool;
295s default: False)
295s transmission-apply: Controls the fiber to fiber transmission
295s correction. (bool; default: False)
295s rbin-method: Method to use : `linear' or `spline' (str;
295s default: 'linear')
295s rbin-xresid: Use x residuals during rebinning? `true'/`false'
295s (bool; default: True)
295s rbin-lstep: Lambda step size, only used if scaling method is
295s 'linear' (float; default: 0.005)
295s rbin-scmethod: Scaling method: `log' or `linear' (str; default:
295s 'linear')
295s rbin-size: Size of output rebinned spectra, 0 means
295s calculate size based on wavelength range and
295s lambda stepsize (int; default: 0)
295s rbin-range: Rebinning range: `setup' or `common' (str;
295s default: 'common')
295s recon-min: Minimum wavelength for image reconstruction
295s (float; default: 0.0)
295s recon-max: Maximum wavelength for image reconstruction
295s (float; default: 0.0)
295s recon-cube: Turns data cube creation on and off (bool;
295s default: True)
295s recon-format: Selects the file format for cubes (str; default:
295s 'single')
295s flx-skycorr: Correct spectra for the sky emission (bool;
295s default: False)
295s max-dist: Standar star search radius (float; default:
295s 60.0)
295s Author: Giraffe Pipeline
295s
295s
295s Recipe giscience:
295s version 2.16.10
295s Parameters: {'remove-bias': True, 'bsremove-method': 'PROFILE', 'bsremove-areas': '5:40:0:4095', 'bsremove-sigma': 2.5, 'bsremove-niter': 5, 'bsremove-mfrac': 0.8, 'bsremove-xorder': 1, 'bsremove-yorder': 1, 'bsremove-xstep': 1, 'bsremove-ystep': 1, 'extr-method': 'SUM', 'extr-ron': -1.0, 'extr-psfmodel': 'psfexp2', 'extr-psfsigma': 7.0, 'extr-psfniter': 2, 'extr-hewidth': 2, 'extr-hmingood': 3, 'extr-omfrac': 0.9, 'extr-owfactor': 3.0, 'extr-obkgorder': 2, 'flat-apply': True, 'transmission-apply': False, 'rbin-method': 'linear', 'rbin-xresid': True, 'rbin-lstep': 0.005, 'rbin-scmethod': 'linear', 'rbin-size': 0, 'rbin-range': 'setup', 'siwc-apply': True, 'scal-cniter': 1, 'scal-zmax': 10000.0, 'scal-cstep': -0.005, 'scal-cdomain': '0.,0.', 'scal-rvlimits': '-200.,200.', 'scal-rvniter': 3, 'scal-rvwfactor': 1.5, 'scal-pfniter': 50, 'scal-pfntest': 7, 'scal-pfdchisq': 0.0001, 'recon-min': 0.0, 'recon-max': 0.0, 'recon-cube': True, 'recon-format': 'single', 'generate-SDP-format': False, 'dummy-association-keys': 0}
295s Docstring: Process a science observation.
295s
295s For detailed information please refer to the GIRAFFE pipeline user
295s manual. It is available at http://www.eso.org/pipelines.
295s
295s Parameters:
295s remove-bias: Enable bias removal (bool; default: True)
295s bsremove-method: Bias removal method (str; default: 'PROFILE')
295s bsremove-areas: Bias areas to use (Xl0:Xr0:Yl0:Yr0, ...
295s ,Xln:Xrn:Yln:Yrn) (str; default:
295s '5:40:0:4095')
295s bsremove-sigma: Sigma Clipping: sigma threshold factor
295s (float; default: 2.5)
295s bsremove-niter: Sigma Clipping: maximum number of iterations
295s (int; default: 5)
295s bsremove-mfrac: Sigma Clipping: minimum fraction of points
295s accepted/total [0.0..1.0] (float; default:
295s 0.8)
295s bsremove-xorder: Order of X polynomial fit (CURVE method only)
295s (int; default: 1)
295s bsremove-yorder: Order of Y polynomial fit (CURVE method only)
295s (int; default: 1)
295s bsremove-xstep: Sampling step along X (CURVE method only)
295s (int; default: 1)
295s bsremove-ystep: Sampling step along Y (CURVE method only)
295s (int; default: 1)
295s extr-method: Extraction method: 'SUM', 'HORNE' or
295s 'OPTIMAL' (str; default: 'SUM')
295s extr-ron: New bias sigma (RON) value for bias and dark
295s corrected image (float; default: -1.0)
295s extr-psfmodel: PSF profile model: `psfexp', `psfexp2' (str;
295s default: 'psfexp2')
295s extr-psfsigma: Sigma clippging threshold used for rejecting
295s data points during PSF fitting (Horne's
295s sigma). It is used to reject bad pixels and
295s cosmics. (float; default: 7.0)
295s extr-psfniter: Maximum number of iterations used for fitting
295s the PSF profile. (int; default: 2)
295s extr-hewidth: Horne extraction method: Number of extra
295s pixels added to the fiber half-width. (int;
295s default: 2)
295s extr-hmingood: Horne extraction method: Minimum number of
295s points used for the profile fit. It sets the
295s lower limit of data points for the pixel
295s rejection. (int; default: 3)
295s extr-omfrac: Optimal extraction method: Minimum fraction
295s of the data points used for fitting the fiber
295s profiles. It sets the lower limit for the
295s pixel rejection. (float; default: 0.9)
295s extr-owfactor: Optimal extraction method: Factor by which
295s the fiber PSF half width is multiplied.
295s Adjacent spectra within this area are assumed
295s to affect the spectrum being extracted.
295s (float; default: 3.0)
295s extr-obkgorder: Optimal extraction method: Order of the
295s polynomial background model, which is fitted
295s for each wavelength bin along the spatial
295s direction. (int; default: 2)
295s flat-apply: Controls the flat field correction. (bool;
295s default: True)
295s transmission-apply: Controls the fiber to fiber transmission
295s correction. (bool; default: False)
295s rbin-method: Method to use : `linear' or `spline' (str;
295s default: 'linear')
295s rbin-xresid: Use x residuals during rebinning?
295s `true'/`false' (bool; default: True)
295s rbin-lstep: Lambda step size, only used if scaling method
295s is 'linear' (float; default: 0.005)
295s rbin-scmethod: Scaling method: `log' or `linear' (str;
295s default: 'linear')
295s rbin-size: Size of output rebinned spectra, 0 means
295s calculate size based on wavelength range and
295s lambda stepsize (int; default: 0)
295s rbin-range: Rebinning range: `setup' or `common' (str;
295s default: 'setup')
295s siwc-apply: Enable simultaneous wavelength calibration
295s correction. (bool; default: True)
295s scal-cniter: Slit geometry calibration maximum number of
295s iterations. (int; default: 1)
295s scal-zmax: Maximum allowed pixel value. To be effective
295s it must be larger than 0. (float; default:
295s 10000.0)
295s scal-cstep: Cross-correlation step. (float; default:
295s -0.005)
295s scal-cdomain: Restricts the cross-correlation to the given
295s domain. (str; default: '0.,0.')
295s scal-rvlimits: Delta RV limits of the cross-correlation
295s window in km/s. (str; default: '-200.,200.')
295s scal-rvniter: Maximum number of iterations used for the RV
295s determination. (int; default: 3)
295s scal-rvwfactor: Data window width factor. The FWHM times this
295s value determines the window width. (float;
295s default: 1.5)
295s scal-pfniter: Peak model fit maximum number of iterations.
295s (int; default: 50)
295s scal-pfntest: Cross-correlation peak fit maximum number of
295s tests (int; default: 7)
295s scal-pfdchisq: Cross-correlation peak fit minimum chi-square
295s difference. (float; default: 0.0001)
295s recon-min: Minimum wavelength for image reconstruction
295s (float; default: 0.0)
295s recon-max: Maximum wavelength for image reconstruction
295s (float; default: 0.0)
295s recon-cube: Turns data cube creation on and off (bool;
295s default: True)
295s recon-format: Selects the file format for cubes (str;
295s default: 'single')
295s generate-SDP-format: TRUE if additional files should be generated
295s in Science Data Product (SDP) format. (bool;
295s default: False)
295s dummy-association-keys: Sets the number of dummy (empty) ASSONi,
295s ASSOCi and ASSOMi keywords to create. (int;
295s default: 0)
295s Author: Giraffe Pipeline
295s
295s
295s autopkgtest [00:39:39]: test test-recipe.py: -----------------------]
295s autopkgtest [00:39:39]: test test-recipe.py: - - - - - - - - - - results - - - - - - - - - -
295s test-recipe.py PASS
296s autopkgtest [00:39:40]: @@@@@@@@@@@@@@@@@@@@ summary
296s test-recipe.py PASS
307s Creating nova instance adt-noble-amd64-cpl-plugin-giraf-20240326-003443-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-amd64-server-20240325.img (UUID ba43860b-557a-4db2-b3f0-378a99bca08c)...