0s autopkgtest [11:25:41]: starting date and time: 2024-03-27 11:25:41+0000 0s autopkgtest [11:25:41]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [11:25:41]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.md6nlzyg/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed --apt-upgrade bbmap --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=openjdk-17/17.0.11~7ea-1 openjdk-21/21.0.3~7ea-1 openjdk-22/22+36-1 openjdk-23/23~15ea-1 openjdk-8/8u402-ga-2ubuntu6 openjdk-lts/11.0.23~7ea-1ubuntu1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-46.secgroup --name adt-noble-amd64-bbmap-20240327-112541-juju-7f2275-prod-proposed-migration-environment-3-f99a8b9f-c5ec-4157-a974-5c043008a764 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 502s autopkgtest [11:34:03]: testbed dpkg architecture: amd64 502s autopkgtest [11:34:03]: testbed apt version: 2.7.12 502s autopkgtest [11:34:03]: @@@@@@@@@@@@@@@@@@@@ test bed setup 503s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 503s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [8504 B] 503s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [493 kB] 503s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [55.4 kB] 503s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3998 kB] 503s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [474 kB] 503s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [724 kB] 503s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 503s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 503s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [39.7 kB] 503s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 503s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4363 kB] 503s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1244 kB] 503s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 503s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [97.3 kB] 503s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [28.6 kB] 503s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 506s Fetched 11.7 MB in 1s (8339 kB/s) 506s Reading package lists... 508s Reading package lists... 508s Building dependency tree... 508s Reading state information... 508s Calculating upgrade... 509s The following packages will be upgraded: 509s binutils binutils-common binutils-x86-64-linux-gnu libbinutils libctf-nobfd0 509s libctf0 libexpat1 libgprofng0 libsframe1 psmisc 509s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 509s Need to get 4623 kB of archives. 509s After this operation, 26.6 kB disk space will be freed. 509s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libexpat1 amd64 2.6.1-2 [86.9 kB] 509s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 psmisc amd64 23.7-1 [179 kB] 509s Get:3 http://ftpmaster.internal/ubuntu noble/main amd64 libgprofng0 amd64 2.42-4ubuntu1 [851 kB] 509s Get:4 http://ftpmaster.internal/ubuntu noble/main amd64 libctf0 amd64 2.42-4ubuntu1 [94.6 kB] 509s Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libctf-nobfd0 amd64 2.42-4ubuntu1 [97.1 kB] 509s Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 binutils-x86-64-linux-gnu amd64 2.42-4ubuntu1 [2470 kB] 509s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libbinutils amd64 2.42-4ubuntu1 [573 kB] 509s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 binutils amd64 2.42-4ubuntu1 [18.0 kB] 509s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 binutils-common amd64 2.42-4ubuntu1 [239 kB] 509s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 libsframe1 amd64 2.42-4ubuntu1 [14.8 kB] 509s Fetched 4623 kB in 0s (65.2 MB/s) 509s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 509s Preparing to unpack .../0-libexpat1_2.6.1-2_amd64.deb ... 509s Unpacking libexpat1:amd64 (2.6.1-2) over (2.6.0-1) ... 509s Preparing to unpack .../1-psmisc_23.7-1_amd64.deb ... 509s Unpacking psmisc (23.7-1) over (23.6-2) ... 509s Preparing to unpack .../2-libgprofng0_2.42-4ubuntu1_amd64.deb ... 509s Unpacking libgprofng0:amd64 (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 509s Preparing to unpack .../3-libctf0_2.42-4ubuntu1_amd64.deb ... 509s Unpacking libctf0:amd64 (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 509s Preparing to unpack .../4-libctf-nobfd0_2.42-4ubuntu1_amd64.deb ... 509s Unpacking libctf-nobfd0:amd64 (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 509s Preparing to unpack .../5-binutils-x86-64-linux-gnu_2.42-4ubuntu1_amd64.deb ... 509s Unpacking binutils-x86-64-linux-gnu (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 509s Preparing to unpack .../6-libbinutils_2.42-4ubuntu1_amd64.deb ... 509s Unpacking libbinutils:amd64 (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 510s Preparing to unpack .../7-binutils_2.42-4ubuntu1_amd64.deb ... 510s Unpacking binutils (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 510s Preparing to unpack .../8-binutils-common_2.42-4ubuntu1_amd64.deb ... 510s Unpacking binutils-common:amd64 (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 510s Preparing to unpack .../9-libsframe1_2.42-4ubuntu1_amd64.deb ... 510s Unpacking libsframe1:amd64 (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 510s Setting up libexpat1:amd64 (2.6.1-2) ... 510s Setting up psmisc (23.7-1) ... 510s Setting up binutils-common:amd64 (2.42-4ubuntu1) ... 510s Setting up libctf-nobfd0:amd64 (2.42-4ubuntu1) ... 510s Setting up libsframe1:amd64 (2.42-4ubuntu1) ... 510s Setting up libbinutils:amd64 (2.42-4ubuntu1) ... 510s Setting up libctf0:amd64 (2.42-4ubuntu1) ... 510s Setting up libgprofng0:amd64 (2.42-4ubuntu1) ... 510s Setting up binutils-x86-64-linux-gnu (2.42-4ubuntu1) ... 510s Setting up binutils (2.42-4ubuntu1) ... 510s Processing triggers for libc-bin (2.39-0ubuntu6) ... 510s Processing triggers for man-db (2.12.0-3) ... 511s Reading package lists... 511s Building dependency tree... 511s Reading state information... 511s 0 upgraded, 0 newly installed, 0 to remove and 241 not upgraded. 511s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 511s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 511s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 511s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 513s Reading package lists... 513s Reading package lists... 513s Building dependency tree... 513s Reading state information... 514s Calculating upgrade... 514s The following packages were automatically installed and are no longer required: 514s libaio1 libnetplan0 python3-distutils python3-lib2to3 514s Use 'sudo apt autoremove' to remove them. 514s The following packages will be REMOVED: 514s libapt-pkg6.0 libarchive13 libatm1 libcurl3-gnutls libcurl4 libdb5.3 libelf1 514s libext2fs2 libgdbm-compat4 libgdbm6 libglib2.0-0 libgnutls30 libgpgme11 514s libhogweed6 libmagic1 libnettle8 libnpth0 libnvme1 libparted2 libperl5.38 514s libpng16-16 libpsl5 libreadline8 libreiserfscore0 libssl3 libtirpc3 514s libtss2-esys-3.0.2-0 libtss2-mu-4.0.1-0 libtss2-sys1 libtss2-tcti-cmd0 514s libtss2-tcti-device0 libtss2-tcti-mssim0 libtss2-tcti-swtpm0 liburcu8 libuv1 514s The following NEW packages will be installed: 514s bpfcc-tools bpftrace fontconfig-config fonts-dejavu-core fonts-dejavu-mono 514s hwdata ieee-data libaio1t64 libapt-pkg6.0t64 libarchive13t64 libatm1t64 514s libbpfcc libc-dev-bin libc-devtools libc6-dev libclang-cpp18 libclang1-18 514s libcrypt-dev libcurl3t64-gnutls libcurl4t64 libdb5.3t64 libdeflate0 514s libdw1t64 libelf1t64 libext2fs2t64 libfontconfig1 libgd3 libgdbm-compat4t64 514s libgdbm6t64 libglib2.0-0t64 libgnutls30t64 libgpgme11t64 libhogweed6t64 514s libjbig0 libjpeg-turbo8 libjpeg8 liblerc4 libllvm18 libmagic1t64 libnetplan1 514s libnettle8t64 libnpth0t64 libnvme1t64 libparted2t64 libperl5.38t64 514s libpng16-16t64 libpsl5t64 libreadline8t64 libreiserfscore0t64 libsharpyuv0 514s libssl3t64 libtiff6 libtirpc3t64 libtss2-esys-3.0.2-0t64 514s libtss2-mu-4.0.1-0t64 libtss2-sys1t64 libtss2-tcti-cmd0t64 514s libtss2-tcti-device0t64 libtss2-tcti-mssim0t64 libtss2-tcti-swtpm0t64 514s liburcu8t64 libuv1t64 libwebp7 libxpm4 linux-headers-6.8.0-20 514s linux-headers-6.8.0-20-generic linux-image-6.8.0-20-generic linux-libc-dev 514s linux-modules-6.8.0-20-generic linux-modules-extra-6.8.0-20-generic 514s linux-tools-6.8.0-20 linux-tools-6.8.0-20-generic linux-tools-common 514s manpages manpages-dev python3-bpfcc python3-netaddr rpcsvc-proto 514s ubuntu-kernel-accessories xdg-user-dirs 514s The following packages will be upgraded: 514s apparmor apt apt-utils base-files bash bind9-dnsutils bind9-host bind9-libs 514s bolt bsdextrautils bsdutils btrfs-progs coreutils cryptsetup-bin curl dbus 514s dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common 514s dbus-user-session dhcpcd-base dirmngr dmsetup dpkg dpkg-dev e2fsprogs 514s e2fsprogs-l10n eject fdisk file ftp fwupd gawk gcc-13-base gcc-14-base 514s gir1.2-girepository-2.0 gir1.2-glib-2.0 gnupg gnupg-l10n gnupg-utils gpg 514s gpg-agent gpg-wks-client gpgconf gpgsm gpgv groff-base grub-common grub-pc 514s grub-pc-bin grub2-common ibverbs-providers inetutils-telnet info 514s initramfs-tools initramfs-tools-bin initramfs-tools-core install-info 514s iproute2 jq keyboxd kmod kpartx krb5-locales libapparmor1 libaudit-common 514s libaudit1 libblkid1 libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3 514s libblockdev-mdraid3 libblockdev-nvme3 libblockdev-part3 libblockdev-swap3 514s libblockdev-utils3 libblockdev3 libbpf1 libbrotli1 libcap-ng0 libcom-err2 514s libcryptsetup12 libdbus-1-3 libdebconfclient0 libdevmapper1.02.1 514s libdpkg-perl libevent-core-2.1-7 libfdisk1 libfido2-1 libfreetype6 514s libftdi1-2 libfwupd2 libgcc-s1 libgirepository-1.0-1 libglib2.0-data 514s libgssapi-krb5-2 libgudev-1.0-0 libgusb2 libibverbs1 libjcat1 libjq1 514s libjson-glib-1.0-0 libjson-glib-1.0-common libk5crypto3 libkmod2 libkrb5-3 514s libkrb5support0 libldap-common libldap2 liblocale-gettext-perl liblzma5 514s libmagic-mgc libmbim-glib4 libmbim-proxy libmm-glib0 libmount1 libnghttp2-14 514s libnsl2 libnss-systemd libpam-modules libpam-modules-bin libpam-runtime 514s libpam-systemd libpam0g libplymouth5 libpolkit-agent-1-0 514s libpolkit-gobject-1-0 libproc2-0 libprotobuf-c1 libpython3-stdlib 514s libpython3.11-minimal libpython3.11-stdlib libpython3.12-minimal 514s libpython3.12-stdlib libqmi-glib5 libqmi-proxy libqrtr-glib0 librtmp1 514s libsasl2-2 libsasl2-modules libsasl2-modules-db libseccomp2 libselinux1 514s libsemanage-common libsemanage2 libslang2 libsmartcols1 libsqlite3-0 libss2 514s libssh-4 libstdc++6 libsystemd-shared libsystemd0 libtext-charwidth-perl 514s libtext-iconv-perl libtirpc-common libudev1 libudisks2-0 libusb-1.0-0 514s libuuid1 libvolume-key1 libxml2 libxmlb2 libxmuu1 linux-generic 514s linux-headers-generic linux-headers-virtual linux-image-generic 514s linux-image-virtual linux-virtual logsave lshw lsof man-db mokutil 514s motd-news-config mount mtr-tiny multipath-tools netplan-generator netplan.io 514s openssh-client openssh-server openssh-sftp-server openssl parted perl 514s perl-base perl-modules-5.38 pinentry-curses plymouth 514s plymouth-theme-ubuntu-text procps python-apt-common python3 python3-apt 514s python3-cryptography python3-dbus python3-distutils python3-gdbm python3-gi 514s python3-lib2to3 python3-minimal python3-netplan python3-pkg-resources 514s python3-pyrsistent python3-setuptools python3-typing-extensions python3-yaml 514s python3.11 python3.11-minimal python3.12 python3.12-minimal readline-common 514s rsync rsyslog sbsigntool shared-mime-info sudo systemd systemd-dev 514s systemd-resolved systemd-sysv systemd-timesyncd tcpdump telnet tnftp 514s ubuntu-pro-client ubuntu-pro-client-l10n udev udisks2 usb.ids util-linux 514s uuid-runtime vim-common vim-tiny wget xxd xz-utils zlib1g 514s 241 upgraded, 80 newly installed, 35 to remove and 0 not upgraded. 514s Need to get 344 MB of archives. 514s After this operation, 579 MB of additional disk space will be used. 514s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 motd-news-config all 13ubuntu8 [5098 B] 514s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 base-files amd64 13ubuntu8 [74.2 kB] 514s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 bash amd64 5.2.21-2ubuntu3 [794 kB] 514s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 bsdutils amd64 1:2.39.3-9ubuntu2 [94.9 kB] 514s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libbrotli1 amd64 1.1.0-2build1 [331 kB] 514s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgssapi-krb5-2 amd64 1.20.1-6ubuntu1 [142 kB] 514s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libkrb5-3 amd64 1.20.1-6ubuntu1 [347 kB] 514s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libkrb5support0 amd64 1.20.1-6ubuntu1 [33.4 kB] 514s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libk5crypto3 amd64 1.20.1-6ubuntu1 [81.7 kB] 514s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libcom-err2 amd64 1.47.0-2.4~exp1ubuntu2 [22.7 kB] 514s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 zlib1g amd64 1:1.3.dfsg-3.1ubuntu1 [62.7 kB] 514s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2build6 [56.3 kB] 514s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 udisks2 amd64 2.10.1-6 [297 kB] 514s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libudisks2-0 amd64 2.10.1-6 [174 kB] 514s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblkid1 amd64 2.39.3-9ubuntu2 [122 kB] 514s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 liblzma5 amd64 5.6.0-0.2 [157 kB] 514s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 kmod amd64 31+20240202-2ubuntu4 [101 kB] 514s Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libkmod2 amd64 31+20240202-2ubuntu4 [51.5 kB] 514s Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 systemd-dev all 255.4-1ubuntu5 [103 kB] 514s Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 systemd-timesyncd amd64 255.4-1ubuntu5 [35.3 kB] 514s Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dbus-session-bus-common all 1.14.10-4ubuntu2 [80.3 kB] 514s Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libaudit-common all 1:3.1.2-2.1 [5674 B] 514s Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libcap-ng0 amd64 0.8.4-2build1 [15.1 kB] 514s Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libaudit1 amd64 1:3.1.2-2.1 [46.8 kB] 514s Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpam0g amd64 1.5.3-5ubuntu3 [67.5 kB] 514s Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libselinux1 amd64 3.5-2ubuntu1 [79.5 kB] 514s Get:27 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libcurl4t64 amd64 8.5.0-2ubuntu8 [340 kB] 514s Get:28 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 curl amd64 8.5.0-2ubuntu8 [227 kB] 514s Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpsl5t64 amd64 0.21.2-1.1 [57.0 kB] 514s Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 wget amd64 1.21.4-1ubuntu2 [333 kB] 514s Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 tnftp amd64 20230507-2build1 [103 kB] 514s Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 tcpdump amd64 4.99.4-3ubuntu2 [479 kB] 514s Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsystemd-shared amd64 255.4-1ubuntu5 [2067 kB] 514s Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 systemd-resolved amd64 255.4-1ubuntu5 [296 kB] 514s Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 sudo amd64 1.9.15p5-3ubuntu3 [948 kB] 514s Get:36 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 sbsigntool amd64 0.9.4-3.1ubuntu5 [52.4 kB] 514s Get:37 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 rsync amd64 3.2.7-1build1 [435 kB] 514s Get:38 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-cryptography amd64 41.0.7-4build2 [810 kB] 514s Get:39 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 openssl amd64 3.0.13-0ubuntu2 [1002 kB] 514s Get:40 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 openssh-sftp-server amd64 1:9.6p1-3ubuntu11 [37.4 kB] 514s Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 openssh-client amd64 1:9.6p1-3ubuntu11 [905 kB] 514s Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 openssh-server amd64 1:9.6p1-3ubuntu11 [509 kB] 514s Get:43 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 mokutil amd64 0.6.0-2build1 [26.7 kB] 514s Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtss2-mu-4.0.1-0t64 amd64 4.0.1-7.1ubuntu4 [62.9 kB] 514s Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtss2-tcti-cmd0t64 amd64 4.0.1-7.1ubuntu4 [16.0 kB] 514s Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtss2-tcti-device0t64 amd64 4.0.1-7.1ubuntu4 [14.6 kB] 514s Get:47 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtss2-tcti-mssim0t64 amd64 4.0.1-7.1ubuntu4 [14.8 kB] 514s Get:48 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtss2-tcti-swtpm0t64 amd64 4.0.1-7.1ubuntu4 [14.9 kB] 514s Get:49 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtss2-sys1t64 amd64 4.0.1-7.1ubuntu4 [35.4 kB] 514s Get:50 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtss2-esys-3.0.2-0t64 amd64 4.0.1-7.1ubuntu4 [145 kB] 514s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libssl3t64 amd64 3.0.13-0ubuntu2 [1936 kB] 514s Get:52 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libnss-systemd amd64 255.4-1ubuntu5 [159 kB] 514s Get:53 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libudev1 amd64 255.4-1ubuntu5 [174 kB] 514s Get:54 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 systemd amd64 255.4-1ubuntu5 [3470 kB] 514s Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 udev amd64 255.4-1ubuntu5 [1873 kB] 514s Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 systemd-sysv amd64 255.4-1ubuntu5 [11.9 kB] 514s Get:57 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpam-systemd amd64 255.4-1ubuntu5 [235 kB] 514s Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsystemd0 amd64 255.4-1ubuntu5 [428 kB] 514s Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpam-modules-bin amd64 1.5.3-5ubuntu3 [51.9 kB] 514s Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpam-modules amd64 1.5.3-5ubuntu3 [279 kB] 514s Get:61 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpam-runtime all 1.5.3-5ubuntu3 [40.8 kB] 514s Get:62 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dbus-user-session amd64 1.14.10-4ubuntu2 [9960 B] 514s Get:63 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libapparmor1 amd64 4.0.0-beta3-0ubuntu2 [49.4 kB] 514s Get:64 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dbus-system-bus-common all 1.14.10-4ubuntu2 [81.5 kB] 514s Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dbus-bin amd64 1.14.10-4ubuntu2 [39.3 kB] 514s Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dbus amd64 1.14.10-4ubuntu2 [24.3 kB] 514s Get:67 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dbus-daemon amd64 1.14.10-4ubuntu2 [118 kB] 514s Get:68 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdbus-1-3 amd64 1.14.10-4ubuntu2 [210 kB] 514s Get:69 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libmount1 amd64 2.39.3-9ubuntu2 [134 kB] 514s Get:70 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libseccomp2 amd64 2.5.5-1ubuntu2 [50.3 kB] 514s Get:71 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdevmapper1.02.1 amd64 2:1.02.185-3ubuntu2 [139 kB] 514s Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libuuid1 amd64 2.39.3-9ubuntu2 [35.0 kB] 514s Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libcryptsetup12 amd64 2:2.7.0-1ubuntu2 [266 kB] 514s Get:74 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libfdisk1 amd64 2.39.3-9ubuntu2 [146 kB] 514s Get:75 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 mount amd64 2.39.3-9ubuntu2 [118 kB] 514s Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblockdev-utils3 amd64 3.1.0-1build1 [19.1 kB] 514s Get:77 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgpgme11t64 amd64 1.18.0-4.1ubuntu3 [136 kB] 514s Get:78 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 parted amd64 3.6-3.1build2 [43.3 kB] 514s Get:79 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libparted2t64 amd64 3.6-3.1build2 [153 kB] 514s Get:80 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3.12 amd64 3.12.2-4build3 [645 kB] 514s Get:81 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3.12-minimal amd64 3.12.2-4build3 [2199 kB] 514s Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.12-stdlib amd64 3.12.2-4build3 [2001 kB] 514s Get:83 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.12-minimal amd64 3.12.2-4build3 [830 kB] 514s Get:84 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-5ubuntu1 [20.1 kB] 514s Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3.11 amd64 3.11.8-1build4 [589 kB] 514s Get:86 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3.11-minimal amd64 3.11.8-1build4 [2062 kB] 514s Get:87 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.11-stdlib amd64 3.11.8-1build4 [1898 kB] 514s Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.11-minimal amd64 3.11.8-1build4 [839 kB] 514s Get:89 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsqlite3-0 amd64 3.45.1-1ubuntu1 [701 kB] 514s Get:90 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 perl-modules-5.38 all 5.38.2-3.2 [3110 kB] 514s Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-6 [738 kB] 514s Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-gdbm amd64 3.12.2-3ubuntu1.1 [18.7 kB] 514s Get:93 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 man-db amd64 2.12.0-3build4 [1230 kB] 514s Get:94 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgdbm6t64 amd64 1.23-5.1 [34.4 kB] 514s Get:95 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgdbm-compat4t64 amd64 1.23-5.1 [6700 B] 514s Get:96 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libperl5.38t64 amd64 5.38.2-3.2 [4871 kB] 515s Get:97 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 perl amd64 5.38.2-3.2 [231 kB] 515s Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 perl-base amd64 5.38.2-3.2 [1823 kB] 515s Get:99 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gcc-14-base amd64 14-20240315-1ubuntu1 [47.0 kB] 515s Get:100 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgcc-s1 amd64 14-20240315-1ubuntu1 [78.1 kB] 515s Get:101 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libstdc++6 amd64 14-20240315-1ubuntu1 [795 kB] 515s Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libnettle8t64 amd64 3.9.1-2.2 [181 kB] 515s Get:103 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libhogweed6t64 amd64 3.9.1-2.2 [199 kB] 515s Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgnutls30t64 amd64 3.8.3-1.1ubuntu2 [1094 kB] 515s Get:105 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libcurl3t64-gnutls amd64 8.5.0-2ubuntu8 [332 kB] 515s Get:106 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 apt-utils amd64 2.7.14 [217 kB] 515s Get:107 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libapt-pkg6.0t64 amd64 2.7.14 [985 kB] 515s Get:108 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 apt amd64 2.7.14 [1375 kB] 515s Get:109 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 ubuntu-pro-client-l10n amd64 31.2.2 [19.4 kB] 515s Get:110 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 ubuntu-pro-client amd64 31.2.2 [215 kB] 515s Get:111 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 keyboxd amd64 2.4.4-2ubuntu15 [78.3 kB] 515s Get:112 http://ftpmaster.internal/ubuntu noble/main amd64 libnpth0t64 amd64 1.6-3.1 [8316 B] 515s Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gpgv amd64 2.4.4-2ubuntu15 [157 kB] 515s Get:114 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gpg amd64 2.4.4-2ubuntu15 [565 kB] 515s Get:115 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gpg-wks-client amd64 2.4.4-2ubuntu15 [70.8 kB] 515s Get:116 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gnupg-utils amd64 2.4.4-2ubuntu15 [108 kB] 515s Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gpg-agent amd64 2.4.4-2ubuntu15 [227 kB] 515s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gpgsm amd64 2.4.4-2ubuntu15 [232 kB] 515s Get:119 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libreadline8t64 amd64 8.2-4 [153 kB] 515s Get:120 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gawk amd64 1:5.2.1-2build2 [463 kB] 515s Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 fdisk amd64 2.39.3-9ubuntu2 [121 kB] 515s Get:122 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gpgconf amd64 2.4.4-2ubuntu15 [103 kB] 515s Get:123 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dirmngr amd64 2.4.4-2ubuntu15 [323 kB] 515s Get:124 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gnupg all 2.4.4-2ubuntu15 [359 kB] 515s Get:125 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-apt amd64 2.7.7 [169 kB] 515s Get:126 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dpkg amd64 1.22.6ubuntu5 [1283 kB] 515s Get:127 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-minimal amd64 3.12.2-0ubuntu1 [27.1 kB] 515s Get:128 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3 amd64 3.12.2-0ubuntu1 [24.1 kB] 515s Get:129 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3-stdlib amd64 3.12.2-0ubuntu1 [9794 B] 515s Get:130 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsmartcols1 amd64 2.39.3-9ubuntu2 [64.4 kB] 515s Get:131 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 bsdextrautils amd64 2.39.3-9ubuntu2 [73.6 kB] 515s Get:132 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 groff-base amd64 1.23.0-3build1 [1020 kB] 515s Get:133 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 pinentry-curses amd64 1.2.1-3ubuntu4 [35.2 kB] 515s Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 readline-common all 8.2-4 [56.4 kB] 515s Get:135 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libvolume-key1 amd64 0.3.12-7build1 [39.7 kB] 515s Get:136 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblockdev-crypto3 amd64 3.1.0-1build1 [21.3 kB] 515s Get:137 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 e2fsprogs-l10n all 1.47.0-2.4~exp1ubuntu2 [5996 B] 515s Get:138 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 logsave amd64 1.47.0-2.4~exp1ubuntu2 [22.4 kB] 515s Get:139 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 initramfs-tools all 0.142ubuntu23 [9058 B] 515s Get:140 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 initramfs-tools-core all 0.142ubuntu23 [50.1 kB] 515s Get:141 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 initramfs-tools-bin amd64 0.142ubuntu23 [20.7 kB] 515s Get:142 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dhcpcd-base amd64 1:10.0.6-1ubuntu2 [215 kB] 515s Get:143 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 shared-mime-info amd64 2.4-1build1 [473 kB] 515s Get:144 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gir1.2-girepository-2.0 amd64 1.79.1-1ubuntu6 [24.7 kB] 515s Get:145 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gir1.2-glib-2.0 amd64 2.79.3-3ubuntu5 [183 kB] 515s Get:146 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgirepository-1.0-1 amd64 1.79.1-1ubuntu6 [81.0 kB] 515s Get:147 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-gi amd64 3.47.0-3build1 [232 kB] 515s Get:148 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-dbus amd64 1.3.2-5build2 [100 kB] 515s Get:149 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libnetplan1 amd64 1.0-1 [120 kB] 515s Get:150 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-netplan amd64 1.0-1 [22.5 kB] 515s Get:151 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 netplan-generator amd64 1.0-1 [59.2 kB] 515s Get:152 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 netplan.io amd64 1.0-1 [65.4 kB] 515s Get:153 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libxmlb2 amd64 0.3.15-1build1 [67.6 kB] 515s Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libqrtr-glib0 amd64 1.2.2-1ubuntu3 [17.5 kB] 515s Get:155 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libqmi-glib5 amd64 1.35.2-0ubuntu1 [884 kB] 515s Get:156 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libqmi-proxy amd64 1.35.2-0ubuntu1 [6146 B] 515s Get:157 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpolkit-agent-1-0 amd64 124-1ubuntu1 [17.4 kB] 515s Get:158 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpolkit-gobject-1-0 amd64 124-1ubuntu1 [48.6 kB] 515s Get:159 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu1 [250 kB] 515s Get:160 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libmbim-glib4 amd64 1.31.2-0ubuntu2 [232 kB] 515s Get:161 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libmbim-proxy amd64 1.31.2-0ubuntu2 [6180 B] 515s Get:162 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libjson-glib-1.0-common all 1.8.0-2build1 [4210 B] 515s Get:163 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libjson-glib-1.0-0 amd64 1.8.0-2build1 [68.0 kB] 515s Get:164 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libjcat1 amd64 0.2.0-2build2 [33.7 kB] 515s Get:165 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgusb2 amd64 0.4.8-1build1 [38.5 kB] 515s Get:166 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgudev-1.0-0 amd64 1:238-3ubuntu2 [15.7 kB] 515s Get:167 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libfwupd2 amd64 1.9.15-2 [133 kB] 515s Get:168 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblockdev3 amd64 3.1.0-1build1 [46.9 kB] 515s Get:169 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblockdev-swap3 amd64 3.1.0-1build1 [7714 B] 515s Get:170 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblockdev-part3 amd64 3.1.0-1build1 [15.3 kB] 515s Get:171 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libnvme1t64 amd64 1.8-3 [75.6 kB] 515s Get:172 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblockdev-nvme3 amd64 3.1.0-1build1 [17.7 kB] 515s Get:173 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblockdev-mdraid3 amd64 3.1.0-1build1 [12.5 kB] 515s Get:174 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblockdev-loop3 amd64 3.1.0-1build1 [7172 B] 515s Get:175 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libarchive13t64 amd64 3.7.2-1.1ubuntu2 [381 kB] 515s Get:176 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 fwupd amd64 1.9.15-2 [4516 kB] 515s Get:177 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 bolt amd64 0.9.6-2build1 [141 kB] 515s Get:178 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libglib2.0-0t64 amd64 2.79.3-3ubuntu5 [1540 kB] 515s Get:179 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libblockdev-fs3 amd64 3.1.0-1build1 [35.2 kB] 515s Get:180 http://ftpmaster.internal/ubuntu noble/main amd64 libreiserfscore0t64 amd64 1:3.6.27-7.1 [76.1 kB] 515s Get:181 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 btrfs-progs amd64 6.6.3-1.1build1 [984 kB] 515s Get:182 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libext2fs2t64 amd64 1.47.0-2.4~exp1ubuntu2 [221 kB] 515s Get:183 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 e2fsprogs amd64 1.47.0-2.4~exp1ubuntu2 [601 kB] 515s Get:184 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libxml2 amd64 2.9.14+dfsg-1.3ubuntu2 [762 kB] 515s Get:185 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libbpf1 amd64 1:1.3.0-2build1 [166 kB] 515s Get:186 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libelf1t64 amd64 0.190-1.1build2 [57.5 kB] 515s Get:187 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtirpc-common all 1.3.4+ds-1.1 [8018 B] 515s Get:188 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 lsof amd64 4.95.0-1build2 [247 kB] 515s Get:189 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libnsl2 amd64 1.3.0-3build2 [41.3 kB] 515s Get:190 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.1 [82.5 kB] 515s Get:191 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 iproute2 amd64 6.1.0-1ubuntu5 [1118 kB] 515s Get:192 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-yaml amd64 6.0.1-2build1 [123 kB] 515s Get:193 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libusb-1.0-0 amd64 2:1.0.27-1 [54.0 kB] 515s Get:194 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libprotobuf-c1 amd64 1.4.1-1ubuntu3 [20.7 kB] 515s Get:195 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libnghttp2-14 amd64 1.59.0-1build1 [73.8 kB] 515s Get:196 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libssh-4 amd64 0.10.6-2build1 [188 kB] 515s Get:197 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-5ubuntu1 [53.2 kB] 515s Get:198 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libldap2 amd64 2.6.7+dfsg-1~exp1ubuntu6 [195 kB] 515s Get:199 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libfido2-1 amd64 1.14.0-1build1 [83.6 kB] 515s Get:200 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libproc2-0 amd64 2:4.0.4-4ubuntu2 [59.2 kB] 515s Get:201 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 procps amd64 2:4.0.4-4ubuntu2 [708 kB] 515s Get:202 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsasl2-modules amd64 2.1.28+dfsg1-5ubuntu1 [69.7 kB] 515s Get:203 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libuv1t64 amd64 1.48.0-1.1 [97.2 kB] 515s Get:204 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 bind9-host amd64 1:9.18.24-0ubuntu3 [50.4 kB] 515s Get:205 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 bind9-dnsutils amd64 1:9.18.24-0ubuntu3 [155 kB] 515s Get:206 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 bind9-libs amd64 1:9.18.24-0ubuntu3 [1239 kB] 515s Get:207 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 coreutils amd64 9.4-3ubuntu3 [1411 kB] 515s Get:208 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 util-linux amd64 2.39.3-9ubuntu2 [1127 kB] 515s Get:209 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 file amd64 1:5.45-3 [22.0 kB] 515s Get:210 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libmagic-mgc amd64 1:5.45-3 [307 kB] 515s Get:211 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libmagic1t64 amd64 1:5.45-3 [87.2 kB] 515s Get:212 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libplymouth5 amd64 24.004.60-1ubuntu6 [137 kB] 515s Get:213 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libfreetype6 amd64 2.13.2+dfsg-1build2 [402 kB] 515s Get:214 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpng16-16t64 amd64 1.6.43-3 [187 kB] 515s Get:215 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 multipath-tools amd64 0.9.4-5ubuntu6 [310 kB] 515s Get:216 http://ftpmaster.internal/ubuntu noble/main amd64 liburcu8t64 amd64 0.14.0-3.1 [62.9 kB] 515s Get:217 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 liblocale-gettext-perl amd64 1.07-6ubuntu4 [15.8 kB] 515s Get:218 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 uuid-runtime amd64 2.39.3-9ubuntu2 [33.0 kB] 515s Get:219 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdebconfclient0 amd64 0.271ubuntu2 [11.3 kB] 515s Get:220 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsemanage-common all 3.5-1build4 [10.1 kB] 515s Get:221 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsemanage2 amd64 3.5-1build4 [93.1 kB] 515s Get:222 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 install-info amd64 7.1-3build1 [62.5 kB] 515s Get:223 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gcc-13-base amd64 13.2.0-21ubuntu1 [48.3 kB] 515s Get:224 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libss2 amd64 1.47.0-2.4~exp1ubuntu2 [17.0 kB] 515s Get:225 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dmsetup amd64 2:1.02.185-3ubuntu2 [79.2 kB] 515s Get:226 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 eject amd64 2.39.3-9ubuntu2 [26.3 kB] 515s Get:227 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 krb5-locales all 1.20.1-6ubuntu1 [13.8 kB] 515s Get:228 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 515s Get:229 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libslang2 amd64 2.3.3-3build1 [506 kB] 515s Get:230 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtext-charwidth-perl amd64 0.04-11build2 [9322 B] 515s Get:231 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtext-iconv-perl amd64 1.7-8build2 [13.5 kB] 515s Get:232 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python-apt-common all 2.7.7 [19.8 kB] 515s Get:233 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-setuptools all 68.1.2-2ubuntu1 [396 kB] 515s Get:234 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-pkg-resources all 68.1.2-2ubuntu1 [168 kB] 515s Get:235 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 rsyslog amd64 8.2312.0-3ubuntu7 [511 kB] 515s Get:236 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 vim-tiny amd64 2:9.1.0016-1ubuntu6 [803 kB] 515s Get:237 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 vim-common all 2:9.1.0016-1ubuntu6 [385 kB] 515s Get:238 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-user-dirs amd64 0.18-1 [18.4 kB] 515s Get:239 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 xxd amd64 2:9.1.0016-1ubuntu6 [62.8 kB] 515s Get:240 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 apparmor amd64 4.0.0-beta3-0ubuntu2 [637 kB] 515s Get:241 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 ftp all 20230507-2build1 [4724 B] 515s Get:242 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 inetutils-telnet amd64 2:2.5-3ubuntu3 [99.4 kB] 515s Get:243 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 info amd64 7.1-3build1 [142 kB] 515s Get:244 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libxmuu1 amd64 2:1.1.3-3build1 [8930 B] 515s Get:245 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 lshw amd64 02.19.git.2021.06.19.996aaad9c7-2build2 [334 kB] 515s Get:246 http://ftpmaster.internal/ubuntu noble/main amd64 manpages all 6.05.01-1 [1340 kB] 515s Get:247 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 mtr-tiny amd64 0.95-1.1build1 [54.2 kB] 515s Get:248 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 plymouth-theme-ubuntu-text amd64 24.004.60-1ubuntu6 [9906 B] 515s Get:249 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 plymouth amd64 24.004.60-1ubuntu6 [134 kB] 515s Get:250 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 telnet all 0.17+2.5-3ubuntu3 [3682 B] 515s Get:251 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 usb.ids all 2024.03.18-1 [223 kB] 515s Get:252 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 xz-utils amd64 5.6.0-0.2 [272 kB] 515s Get:253 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libllvm18 amd64 1:18.1.2-1ubuntu2 [27.5 MB] 515s Get:254 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libclang-cpp18 amd64 1:18.1.2-1ubuntu2 [13.5 MB] 515s Get:255 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 libbpfcc amd64 0.29.1+ds-1ubuntu4 [663 kB] 515s Get:256 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-bpfcc all 0.29.1+ds-1ubuntu4 [40.2 kB] 515s Get:257 http://ftpmaster.internal/ubuntu noble/main amd64 ieee-data all 20220827.1 [2113 kB] 515s Get:258 http://ftpmaster.internal/ubuntu noble/main amd64 python3-netaddr all 0.8.0-2ubuntu1 [319 kB] 515s Get:259 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 bpfcc-tools all 0.29.1+ds-1ubuntu4 [687 kB] 515s Get:260 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libclang1-18 amd64 1:18.1.2-1ubuntu2 [7809 kB] 515s Get:261 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdw1t64 amd64 0.190-1.1build2 [261 kB] 515s Get:262 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 bpftrace amd64 0.20.2-1ubuntu1 [1011 kB] 515s Get:263 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 cryptsetup-bin amd64 2:2.7.0-1ubuntu2 [210 kB] 515s Get:264 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dpkg-dev all 1.22.6ubuntu5 [1074 kB] 515s Get:265 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdpkg-perl all 1.22.6ubuntu5 [269 kB] 515s Get:266 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 515s Get:267 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 515s Get:268 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu1 [37.3 kB] 515s Get:269 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gnupg-l10n all 2.4.4-2ubuntu15 [65.8 kB] 515s Get:270 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 grub2-common amd64 2.12-1ubuntu5 [669 kB] 515s Get:271 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 grub-pc amd64 2.12-1ubuntu5 [137 kB] 515s Get:272 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 grub-pc-bin amd64 2.12-1ubuntu5 [1097 kB] 515s Get:273 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 grub-common amd64 2.12-1ubuntu5 [2111 kB] 515s Get:274 http://ftpmaster.internal/ubuntu noble/main amd64 hwdata all 0.379-1 [29.1 kB] 515s Get:275 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libibverbs1 amd64 50.0-2build1 [67.7 kB] 515s Get:276 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 ibverbs-providers amd64 50.0-2build1 [374 kB] 515s Get:277 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 jq amd64 1.7.1-3 [65.5 kB] 515s Get:278 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libjq1 amd64 1.7.1-3 [140 kB] 515s Get:279 http://ftpmaster.internal/ubuntu noble/main amd64 libaio1t64 amd64 0.3.113-6 [7316 B] 515s Get:280 http://ftpmaster.internal/ubuntu noble/main amd64 libatm1t64 amd64 1:2.5.1-5.1 [22.8 kB] 515s Get:281 http://ftpmaster.internal/ubuntu noble/main amd64 libc-dev-bin amd64 2.39-0ubuntu6 [20.4 kB] 515s Get:282 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu1 [139 kB] 515s Get:283 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] 515s Get:284 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 515s Get:285 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] 515s Get:286 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] 515s Get:287 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] 515s Get:288 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsharpyuv0 amd64 1.3.2-0.4build2 [15.8 kB] 515s Get:289 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libwebp7 amd64 1.3.2-0.4build2 [230 kB] 515s Get:290 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu1 [199 kB] 515s Get:291 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libxpm4 amd64 1:3.5.17-1build1 [36.8 kB] 515s Get:292 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libgd3 amd64 2.3.3-9ubuntu3 [126 kB] 515s Get:293 http://ftpmaster.internal/ubuntu noble/main amd64 libc-devtools amd64 2.39-0ubuntu6 [29.3 kB] 515s Get:294 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-libc-dev amd64 6.8.0-20.20 [1597 kB] 515s Get:295 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] 515s Get:296 http://ftpmaster.internal/ubuntu noble/main amd64 rpcsvc-proto amd64 1.4.2-0ubuntu6 [68.5 kB] 515s Get:297 http://ftpmaster.internal/ubuntu noble/main amd64 libc6-dev amd64 2.39-0ubuntu6 [2126 kB] 515s Get:298 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-9build1 [91.0 kB] 515s Get:299 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libftdi1-2 amd64 1.5-6build4 [28.4 kB] 515s Get:300 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libldap-common all 2.6.7+dfsg-1~exp1ubuntu6 [31.3 kB] 515s Get:301 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-modules-6.8.0-20-generic amd64 6.8.0-20.20 [38.4 MB] 516s Get:302 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-image-6.8.0-20-generic amd64 6.8.0-20.20 [14.7 MB] 516s Get:303 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-modules-extra-6.8.0-20-generic amd64 6.8.0-20.20 [114 MB] 517s Get:304 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-generic amd64 6.8.0-20.20+1 [1734 B] 517s Get:305 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-image-generic amd64 6.8.0-20.20+1 [9744 B] 517s Get:306 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-virtual amd64 6.8.0-20.20+1 [1682 B] 517s Get:307 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-image-virtual amd64 6.8.0-20.20+1 [9700 B] 517s Get:308 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-headers-virtual amd64 6.8.0-20.20+1 [1642 B] 517s Get:309 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-headers-6.8.0-20 all 6.8.0-20.20 [13.6 MB] 517s Get:310 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-headers-6.8.0-20-generic amd64 6.8.0-20.20 [3867 kB] 517s Get:311 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-headers-generic amd64 6.8.0-20.20+1 [9606 B] 517s Get:312 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-tools-common all 6.8.0-20.20 [437 kB] 517s Get:313 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-tools-6.8.0-20 amd64 6.8.0-20.20 [3850 kB] 517s Get:314 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-tools-6.8.0-20-generic amd64 6.8.0-20.20 [1780 B] 517s Get:315 http://ftpmaster.internal/ubuntu noble/main amd64 manpages-dev all 6.05.01-1 [2018 kB] 517s Get:316 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-distutils all 3.12.2-3ubuntu1.1 [133 kB] 517s Get:317 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-lib2to3 all 3.12.2-3ubuntu1.1 [79.1 kB] 517s Get:318 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-pyrsistent amd64 0.20.0-1build1 [55.7 kB] 517s Get:319 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-typing-extensions all 4.10.0-1 [60.7 kB] 517s Get:320 http://ftpmaster.internal/ubuntu noble/main amd64 ubuntu-kernel-accessories amd64 1.536build1 [10.5 kB] 517s Get:321 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 kpartx amd64 0.9.4-5ubuntu6 [31.9 kB] 517s Preconfiguring packages ... 518s Fetched 344 MB in 3s (127 MB/s) 518s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 518s Preparing to unpack .../motd-news-config_13ubuntu8_all.deb ... 518s Unpacking motd-news-config (13ubuntu8) over (13ubuntu7) ... 518s Preparing to unpack .../base-files_13ubuntu8_amd64.deb ... 518s Unpacking base-files (13ubuntu8) over (13ubuntu7) ... 518s Setting up base-files (13ubuntu8) ... 519s motd-news.service is a disabled or a static unit not running, not starting it. 519s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 519s Preparing to unpack .../bash_5.2.21-2ubuntu3_amd64.deb ... 519s Unpacking bash (5.2.21-2ubuntu3) over (5.2.21-2ubuntu2) ... 519s Setting up bash (5.2.21-2ubuntu3) ... 519s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 519s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 519s Preparing to unpack .../bsdutils_1%3a2.39.3-9ubuntu2_amd64.deb ... 519s Unpacking bsdutils (1:2.39.3-9ubuntu2) over (1:2.39.3-6ubuntu2) ... 519s Setting up bsdutils (1:2.39.3-9ubuntu2) ... 519s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 519s Preparing to unpack .../0-libbrotli1_1.1.0-2build1_amd64.deb ... 519s Unpacking libbrotli1:amd64 (1.1.0-2build1) over (1.1.0-2) ... 519s Preparing to unpack .../1-libgssapi-krb5-2_1.20.1-6ubuntu1_amd64.deb ... 519s Unpacking libgssapi-krb5-2:amd64 (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 519s Preparing to unpack .../2-libkrb5-3_1.20.1-6ubuntu1_amd64.deb ... 519s Unpacking libkrb5-3:amd64 (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 519s Preparing to unpack .../3-libkrb5support0_1.20.1-6ubuntu1_amd64.deb ... 519s Unpacking libkrb5support0:amd64 (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 519s Preparing to unpack .../4-libk5crypto3_1.20.1-6ubuntu1_amd64.deb ... 519s Unpacking libk5crypto3:amd64 (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 519s Preparing to unpack .../5-libcom-err2_1.47.0-2.4~exp1ubuntu2_amd64.deb ... 519s Unpacking libcom-err2:amd64 (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 519s Preparing to unpack .../6-zlib1g_1%3a1.3.dfsg-3.1ubuntu1_amd64.deb ... 519s Unpacking zlib1g:amd64 (1:1.3.dfsg-3.1ubuntu1) over (1:1.3.dfsg-3ubuntu1) ... 519s Setting up zlib1g:amd64 (1:1.3.dfsg-3.1ubuntu1) ... 519s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 519s Preparing to unpack .../librtmp1_2.4+20151223.gitfa8646d.1-2build6_amd64.deb ... 519s Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2build6) over (2.4+20151223.gitfa8646d.1-2build4) ... 519s Preparing to unpack .../udisks2_2.10.1-6_amd64.deb ... 519s Unpacking udisks2 (2.10.1-6) over (2.10.1-1ubuntu2) ... 519s Preparing to unpack .../libudisks2-0_2.10.1-6_amd64.deb ... 519s Unpacking libudisks2-0:amd64 (2.10.1-6) over (2.10.1-1ubuntu2) ... 519s Preparing to unpack .../libblkid1_2.39.3-9ubuntu2_amd64.deb ... 519s Unpacking libblkid1:amd64 (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 519s Setting up libblkid1:amd64 (2.39.3-9ubuntu2) ... 519s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 519s Preparing to unpack .../liblzma5_5.6.0-0.2_amd64.deb ... 519s Unpacking liblzma5:amd64 (5.6.0-0.2) over (5.4.5-0.3) ... 519s Setting up liblzma5:amd64 (5.6.0-0.2) ... 519s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 519s Preparing to unpack .../0-kmod_31+20240202-2ubuntu4_amd64.deb ... 519s Unpacking kmod (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ... 519s Preparing to unpack .../1-libkmod2_31+20240202-2ubuntu4_amd64.deb ... 519s Unpacking libkmod2:amd64 (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ... 519s Preparing to unpack .../2-systemd-dev_255.4-1ubuntu5_all.deb ... 519s Unpacking systemd-dev (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 520s Preparing to unpack .../3-systemd-timesyncd_255.4-1ubuntu5_amd64.deb ... 520s Unpacking systemd-timesyncd (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 520s Preparing to unpack .../4-dbus-session-bus-common_1.14.10-4ubuntu2_all.deb ... 520s Unpacking dbus-session-bus-common (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 520s Preparing to unpack .../5-libaudit-common_1%3a3.1.2-2.1_all.deb ... 520s Unpacking libaudit-common (1:3.1.2-2.1) over (1:3.1.2-2) ... 520s Setting up libaudit-common (1:3.1.2-2.1) ... 520s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 520s Preparing to unpack .../libcap-ng0_0.8.4-2build1_amd64.deb ... 520s Unpacking libcap-ng0:amd64 (0.8.4-2build1) over (0.8.4-2) ... 520s Setting up libcap-ng0:amd64 (0.8.4-2build1) ... 520s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 520s Preparing to unpack .../libaudit1_1%3a3.1.2-2.1_amd64.deb ... 520s Unpacking libaudit1:amd64 (1:3.1.2-2.1) over (1:3.1.2-2) ... 520s Setting up libaudit1:amd64 (1:3.1.2-2.1) ... 520s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 520s Preparing to unpack .../libpam0g_1.5.3-5ubuntu3_amd64.deb ... 520s Unpacking libpam0g:amd64 (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 520s Setting up libpam0g:amd64 (1.5.3-5ubuntu3) ... 520s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 520s Preparing to unpack .../libselinux1_3.5-2ubuntu1_amd64.deb ... 520s Unpacking libselinux1:amd64 (3.5-2ubuntu1) over (3.5-2build1) ... 520s Setting up libselinux1:amd64 (3.5-2ubuntu1) ... 520s dpkg: libcurl4:amd64: dependency problems, but removing anyway as you requested: 520s curl depends on libcurl4 (= 8.5.0-2ubuntu2). 520s 520s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 520s Removing libcurl4:amd64 (8.5.0-2ubuntu2) ... 520s Selecting previously unselected package libcurl4t64:amd64. 520s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71856 files and directories currently installed.) 520s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu8_amd64.deb ... 520s Unpacking libcurl4t64:amd64 (8.5.0-2ubuntu8) ... 520s Preparing to unpack .../curl_8.5.0-2ubuntu8_amd64.deb ... 520s Unpacking curl (8.5.0-2ubuntu8) over (8.5.0-2ubuntu2) ... 520s dpkg: libpsl5:amd64: dependency problems, but removing anyway as you requested: 520s wget depends on libpsl5 (>= 0.16.0). 520s libcurl3-gnutls:amd64 depends on libpsl5 (>= 0.16.0). 520s 520s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71862 files and directories currently installed.) 520s Removing libpsl5:amd64 (0.21.2-1build1) ... 520s Selecting previously unselected package libpsl5t64:amd64. 520s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71857 files and directories currently installed.) 520s Preparing to unpack .../00-libpsl5t64_0.21.2-1.1_amd64.deb ... 520s Unpacking libpsl5t64:amd64 (0.21.2-1.1) ... 520s Preparing to unpack .../01-wget_1.21.4-1ubuntu2_amd64.deb ... 520s Unpacking wget (1.21.4-1ubuntu2) over (1.21.4-1ubuntu1) ... 520s Preparing to unpack .../02-tnftp_20230507-2build1_amd64.deb ... 520s Unpacking tnftp (20230507-2build1) over (20230507-2) ... 521s Preparing to unpack .../03-tcpdump_4.99.4-3ubuntu2_amd64.deb ... 521s Unpacking tcpdump (4.99.4-3ubuntu2) over (4.99.4-3ubuntu1) ... 521s Preparing to unpack .../04-libsystemd-shared_255.4-1ubuntu5_amd64.deb ... 521s Unpacking libsystemd-shared:amd64 (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 521s Preparing to unpack .../05-systemd-resolved_255.4-1ubuntu5_amd64.deb ... 521s Unpacking systemd-resolved (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 521s Preparing to unpack .../06-sudo_1.9.15p5-3ubuntu3_amd64.deb ... 521s Unpacking sudo (1.9.15p5-3ubuntu3) over (1.9.15p5-3ubuntu1) ... 521s Preparing to unpack .../07-sbsigntool_0.9.4-3.1ubuntu5_amd64.deb ... 521s Unpacking sbsigntool (0.9.4-3.1ubuntu5) over (0.9.4-3.1ubuntu4) ... 521s Preparing to unpack .../08-rsync_3.2.7-1build1_amd64.deb ... 521s Unpacking rsync (3.2.7-1build1) over (3.2.7-1) ... 521s Preparing to unpack .../09-python3-cryptography_41.0.7-4build2_amd64.deb ... 521s Unpacking python3-cryptography (41.0.7-4build2) over (41.0.7-3) ... 521s Preparing to unpack .../10-openssl_3.0.13-0ubuntu2_amd64.deb ... 521s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 521s Preparing to unpack .../11-openssh-sftp-server_1%3a9.6p1-3ubuntu11_amd64.deb ... 521s Unpacking openssh-sftp-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 521s Preparing to unpack .../12-openssh-client_1%3a9.6p1-3ubuntu11_amd64.deb ... 521s Unpacking openssh-client (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 521s Preparing to unpack .../13-openssh-server_1%3a9.6p1-3ubuntu11_amd64.deb ... 521s Unpacking openssh-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 521s Preparing to unpack .../14-mokutil_0.6.0-2build1_amd64.deb ... 521s Unpacking mokutil (0.6.0-2build1) over (0.6.0-2) ... 521s dpkg: libtss2-tcti-swtpm0:amd64: dependency problems, but removing anyway as you requested: 521s libtss2-esys-3.0.2-0:amd64 depends on libtss2-tcti-swtpm0. 521s 521s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71863 files and directories currently installed.) 521s Removing libtss2-tcti-swtpm0:amd64 (4.0.1-7ubuntu1) ... 521s dpkg: libtss2-mu-4.0.1-0:amd64: dependency problems, but removing anyway as you requested: 521s libtss2-tcti-mssim0:amd64 depends on libtss2-mu-4.0.1-0 (>= 3.0.1). 521s libtss2-tcti-device0:amd64 depends on libtss2-mu-4.0.1-0 (>= 3.0.1). 521s libtss2-tcti-cmd0:amd64 depends on libtss2-mu-4.0.1-0 (>= 3.0.1). 521s libtss2-sys1:amd64 depends on libtss2-mu-4.0.1-0 (>= 3.0.1). 521s libtss2-esys-3.0.2-0:amd64 depends on libtss2-mu-4.0.1-0 (>= 3.0.1). 521s 521s Removing libtss2-mu-4.0.1-0:amd64 (4.0.1-7ubuntu1) ... 521s Selecting previously unselected package libtss2-mu-4.0.1-0t64:amd64. 521s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71852 files and directories currently installed.) 521s Preparing to unpack .../libtss2-mu-4.0.1-0t64_4.0.1-7.1ubuntu4_amd64.deb ... 521s Unpacking libtss2-mu-4.0.1-0t64:amd64 (4.0.1-7.1ubuntu4) ... 522s dpkg: libtss2-tcti-cmd0:amd64: dependency problems, but removing anyway as you requested: 522s libtss2-esys-3.0.2-0:amd64 depends on libtss2-tcti-cmd0. 522s 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71858 files and directories currently installed.) 522s Removing libtss2-tcti-cmd0:amd64 (4.0.1-7ubuntu1) ... 522s Selecting previously unselected package libtss2-tcti-cmd0t64:amd64. 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71853 files and directories currently installed.) 522s Preparing to unpack .../libtss2-tcti-cmd0t64_4.0.1-7.1ubuntu4_amd64.deb ... 522s Unpacking libtss2-tcti-cmd0t64:amd64 (4.0.1-7.1ubuntu4) ... 522s dpkg: libtss2-tcti-device0:amd64: dependency problems, but removing anyway as you requested: 522s libtss2-esys-3.0.2-0:amd64 depends on libtss2-tcti-device0. 522s 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71859 files and directories currently installed.) 522s Removing libtss2-tcti-device0:amd64 (4.0.1-7ubuntu1) ... 522s Selecting previously unselected package libtss2-tcti-device0t64:amd64. 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71854 files and directories currently installed.) 522s Preparing to unpack .../libtss2-tcti-device0t64_4.0.1-7.1ubuntu4_amd64.deb ... 522s Unpacking libtss2-tcti-device0t64:amd64 (4.0.1-7.1ubuntu4) ... 522s dpkg: libtss2-tcti-mssim0:amd64: dependency problems, but removing anyway as you requested: 522s libtss2-esys-3.0.2-0:amd64 depends on libtss2-tcti-mssim0. 522s 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71860 files and directories currently installed.) 522s Removing libtss2-tcti-mssim0:amd64 (4.0.1-7ubuntu1) ... 522s Selecting previously unselected package libtss2-tcti-mssim0t64:amd64. 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71855 files and directories currently installed.) 522s Preparing to unpack .../libtss2-tcti-mssim0t64_4.0.1-7.1ubuntu4_amd64.deb ... 522s Unpacking libtss2-tcti-mssim0t64:amd64 (4.0.1-7.1ubuntu4) ... 522s Selecting previously unselected package libtss2-tcti-swtpm0t64:amd64. 522s Preparing to unpack .../libtss2-tcti-swtpm0t64_4.0.1-7.1ubuntu4_amd64.deb ... 522s Unpacking libtss2-tcti-swtpm0t64:amd64 (4.0.1-7.1ubuntu4) ... 522s dpkg: libtss2-sys1:amd64: dependency problems, but removing anyway as you requested: 522s libtss2-esys-3.0.2-0:amd64 depends on libtss2-sys1 (>= 4.0.1). 522s 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71867 files and directories currently installed.) 522s Removing libtss2-sys1:amd64 (4.0.1-7ubuntu1) ... 522s Selecting previously unselected package libtss2-sys1t64:amd64. 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71862 files and directories currently installed.) 522s Preparing to unpack .../libtss2-sys1t64_4.0.1-7.1ubuntu4_amd64.deb ... 522s Unpacking libtss2-sys1t64:amd64 (4.0.1-7.1ubuntu4) ... 522s dpkg: libtss2-esys-3.0.2-0:amd64: dependency problems, but removing anyway as you requested: 522s fwupd depends on libtss2-esys-3.0.2-0 (>= 2.3.1). 522s 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 522s Removing libtss2-esys-3.0.2-0:amd64 (4.0.1-7ubuntu1) ... 522s Selecting previously unselected package libtss2-esys-3.0.2-0t64:amd64. 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71862 files and directories currently installed.) 522s Preparing to unpack .../libtss2-esys-3.0.2-0t64_4.0.1-7.1ubuntu4_amd64.deb ... 522s Unpacking libtss2-esys-3.0.2-0t64:amd64 (4.0.1-7.1ubuntu4) ... 522s dpkg: libssl3:amd64: dependency problems, but removing anyway as you requested: 522s systemd depends on libssl3 (>= 3.0.0). 522s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 522s libssh-4:amd64 depends on libssl3 (>= 3.0.0). 522s libsasl2-modules:amd64 depends on libssl3 (>= 3.0.0). 522s libsasl2-2:amd64 depends on libssl3 (>= 3.0.0). 522s libpython3.12-minimal:amd64 depends on libssl3 (>= 3.0.0). 522s libpython3.11-minimal:amd64 depends on libssl3 (>= 3.0.0). 522s libnvme1 depends on libssl3 (>= 3.0.0). 522s libfido2-1:amd64 depends on libssl3 (>= 3.0.0). 522s libcryptsetup12:amd64 depends on libssl3 (>= 3.0.0). 522s dhcpcd-base depends on libssl3 (>= 3.0.0). 522s coreutils depends on libssl3 (>= 3.0.0). 522s bind9-libs:amd64 depends on libssl3 (>= 3.0.0). 522s 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 522s Removing libssl3:amd64 (3.0.10-1ubuntu4) ... 522s Selecting previously unselected package libssl3t64:amd64. 522s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71857 files and directories currently installed.) 522s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_amd64.deb ... 522s Unpacking libssl3t64:amd64 (3.0.13-0ubuntu2) ... 522s Setting up libssl3t64:amd64 (3.0.13-0ubuntu2) ... 522s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71870 files and directories currently installed.) 524s Preparing to unpack .../systemd-sysv_255.4-1ubuntu5_amd64.deb ... 524s Unpacking systemd-sysv (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 524s Preparing to unpack .../libpam-systemd_255.4-1ubuntu5_amd64.deb ... 524s Unpacking libpam-systemd:amd64 (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 524s Preparing to unpack .../libpam-modules-bin_1.5.3-5ubuntu3_amd64.deb ... 524s Unpacking libpam-modules-bin (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 524s Setting up libpam-modules-bin (1.5.3-5ubuntu3) ... 524s pam_namespace.service is a disabled or a static unit not running, not starting it. 524s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 524s Preparing to unpack .../libpam-runtime_1.5.3-5ubuntu3_all.deb ... 524s Unpacking libpam-runtime (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 524s Setting up libpam-runtime (1.5.3-5ubuntu3) ... 525s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 525s Preparing to unpack .../0-dbus-user-session_1.14.10-4ubuntu2_amd64.deb ... 525s Unpacking dbus-user-session (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 525s Preparing to unpack .../1-libapparmor1_4.0.0-beta3-0ubuntu2_amd64.deb ... 525s Unpacking libapparmor1:amd64 (4.0.0-beta3-0ubuntu2) over (4.0.0~alpha4-0ubuntu1) ... 525s Preparing to unpack .../2-dbus-system-bus-common_1.14.10-4ubuntu2_all.deb ... 525s Unpacking dbus-system-bus-common (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 525s Preparing to unpack .../3-dbus-bin_1.14.10-4ubuntu2_amd64.deb ... 525s Unpacking dbus-bin (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 525s Preparing to unpack .../4-dbus_1.14.10-4ubuntu2_amd64.deb ... 525s Unpacking dbus (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 525s Preparing to unpack .../5-dbus-daemon_1.14.10-4ubuntu2_amd64.deb ... 525s Unpacking dbus-daemon (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 525s Preparing to unpack .../6-libdbus-1-3_1.14.10-4ubuntu2_amd64.deb ... 525s Unpacking libdbus-1-3:amd64 (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 525s Preparing to unpack .../7-libmount1_2.39.3-9ubuntu2_amd64.deb ... 525s Unpacking libmount1:amd64 (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 525s Setting up libmount1:amd64 (2.39.3-9ubuntu2) ... 525s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 525s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu2_amd64.deb ... 525s Unpacking libseccomp2:amd64 (2.5.5-1ubuntu2) over (2.5.5-1ubuntu1) ... 525s Setting up libseccomp2:amd64 (2.5.5-1ubuntu2) ... 525s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 525s Preparing to unpack .../libdevmapper1.02.1_2%3a1.02.185-3ubuntu2_amd64.deb ... 525s Unpacking libdevmapper1.02.1:amd64 (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ... 525s Preparing to unpack .../libuuid1_2.39.3-9ubuntu2_amd64.deb ... 525s Unpacking libuuid1:amd64 (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 525s Setting up libuuid1:amd64 (2.39.3-9ubuntu2) ... 525s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 525s Preparing to unpack .../libcryptsetup12_2%3a2.7.0-1ubuntu2_amd64.deb ... 525s Unpacking libcryptsetup12:amd64 (2:2.7.0-1ubuntu2) over (2:2.7.0-1ubuntu1) ... 525s Preparing to unpack .../libfdisk1_2.39.3-9ubuntu2_amd64.deb ... 525s Unpacking libfdisk1:amd64 (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 525s Preparing to unpack .../mount_2.39.3-9ubuntu2_amd64.deb ... 525s Unpacking mount (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 525s Preparing to unpack .../libblockdev-utils3_3.1.0-1build1_amd64.deb ... 525s Unpacking libblockdev-utils3:amd64 (3.1.0-1build1) over (3.1.0-1) ... 525s dpkg: libgpgme11:amd64: dependency problems, but removing anyway as you requested: 525s libvolume-key1:amd64 depends on libgpgme11 (>= 1.4.1). 525s libjcat1:amd64 depends on libgpgme11 (>= 1.2.0). 525s 525s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 525s Removing libgpgme11:amd64 (1.18.0-4ubuntu1) ... 525s Selecting previously unselected package libgpgme11t64:amd64. 525s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71862 files and directories currently installed.) 525s Preparing to unpack .../libgpgme11t64_1.18.0-4.1ubuntu3_amd64.deb ... 525s Unpacking libgpgme11t64:amd64 (1.18.0-4.1ubuntu3) ... 525s Preparing to unpack .../parted_3.6-3.1build2_amd64.deb ... 525s Unpacking parted (3.6-3.1build2) over (3.6-3) ... 526s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71869 files and directories currently installed.) 526s Removing libparted2:amd64 (3.6-3) ... 526s Selecting previously unselected package libparted2t64:amd64. 526s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71863 files and directories currently installed.) 526s Preparing to unpack .../00-libparted2t64_3.6-3.1build2_amd64.deb ... 526s Unpacking libparted2t64:amd64 (3.6-3.1build2) ... 526s Preparing to unpack .../01-python3.12_3.12.2-4build3_amd64.deb ... 526s Unpacking python3.12 (3.12.2-4build3) over (3.12.2-1) ... 526s Preparing to unpack .../02-python3.12-minimal_3.12.2-4build3_amd64.deb ... 526s Unpacking python3.12-minimal (3.12.2-4build3) over (3.12.2-1) ... 526s Preparing to unpack .../03-libpython3.12-stdlib_3.12.2-4build3_amd64.deb ... 526s Unpacking libpython3.12-stdlib:amd64 (3.12.2-4build3) over (3.12.2-1) ... 526s Preparing to unpack .../04-libpython3.12-minimal_3.12.2-4build3_amd64.deb ... 526s Unpacking libpython3.12-minimal:amd64 (3.12.2-4build3) over (3.12.2-1) ... 526s Preparing to unpack .../05-libsasl2-modules-db_2.1.28+dfsg1-5ubuntu1_amd64.deb ... 526s Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 526s Preparing to unpack .../06-python3.11_3.11.8-1build4_amd64.deb ... 526s Unpacking python3.11 (3.11.8-1build4) over (3.11.8-1) ... 526s Preparing to unpack .../07-python3.11-minimal_3.11.8-1build4_amd64.deb ... 526s Unpacking python3.11-minimal (3.11.8-1build4) over (3.11.8-1) ... 526s Preparing to unpack .../08-libpython3.11-stdlib_3.11.8-1build4_amd64.deb ... 526s Unpacking libpython3.11-stdlib:amd64 (3.11.8-1build4) over (3.11.8-1) ... 527s Preparing to unpack .../09-libpython3.11-minimal_3.11.8-1build4_amd64.deb ... 527s Unpacking libpython3.11-minimal:amd64 (3.11.8-1build4) over (3.11.8-1) ... 527s Preparing to unpack .../10-libsqlite3-0_3.45.1-1ubuntu1_amd64.deb ... 527s Unpacking libsqlite3-0:amd64 (3.45.1-1ubuntu1) over (3.45.1-1) ... 527s Preparing to unpack .../11-perl-modules-5.38_5.38.2-3.2_all.deb ... 527s Unpacking perl-modules-5.38 (5.38.2-3.2) over (5.38.2-3) ... 527s dpkg: libperl5.38:amd64: dependency problems, but removing anyway as you requested: 527s perl depends on libperl5.38 (= 5.38.2-3). 527s 527s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71866 files and directories currently installed.) 527s Removing libperl5.38:amd64 (5.38.2-3) ... 527s dpkg: libdb5.3:amd64: dependency problems, but removing anyway as you requested: 527s iproute2 depends on libdb5.3. 527s apt-utils depends on libdb5.3. 527s 527s Removing libdb5.3:amd64 (5.3.28+dfsg2-4) ... 527s Selecting previously unselected package libdb5.3t64:amd64. 527s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71338 files and directories currently installed.) 527s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-6_amd64.deb ... 527s Unpacking libdb5.3t64:amd64 (5.3.28+dfsg2-6) ... 527s Preparing to unpack .../python3-gdbm_3.12.2-3ubuntu1.1_amd64.deb ... 527s Unpacking python3-gdbm:amd64 (3.12.2-3ubuntu1.1) over (3.11.5-1) ... 527s Preparing to unpack .../man-db_2.12.0-3build4_amd64.deb ... 527s Unpacking man-db (2.12.0-3build4) over (2.12.0-3) ... 527s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71344 files and directories currently installed.) 527s Removing libgdbm-compat4:amd64 (1.23-5) ... 527s Removing libgdbm6:amd64 (1.23-5) ... 527s Selecting previously unselected package libgdbm6t64:amd64. 527s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71334 files and directories currently installed.) 527s Preparing to unpack .../libgdbm6t64_1.23-5.1_amd64.deb ... 527s Unpacking libgdbm6t64:amd64 (1.23-5.1) ... 527s Selecting previously unselected package libgdbm-compat4t64:amd64. 527s Preparing to unpack .../libgdbm-compat4t64_1.23-5.1_amd64.deb ... 527s Unpacking libgdbm-compat4t64:amd64 (1.23-5.1) ... 528s Selecting previously unselected package libperl5.38t64:amd64. 528s Preparing to unpack .../libperl5.38t64_5.38.2-3.2_amd64.deb ... 528s Unpacking libperl5.38t64:amd64 (5.38.2-3.2) ... 528s Preparing to unpack .../perl_5.38.2-3.2_amd64.deb ... 528s Unpacking perl (5.38.2-3.2) over (5.38.2-3) ... 528s Preparing to unpack .../perl-base_5.38.2-3.2_amd64.deb ... 528s Unpacking perl-base (5.38.2-3.2) over (5.38.2-3) ... 528s Setting up perl-base (5.38.2-3.2) ... 528s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 528s Preparing to unpack .../gcc-14-base_14-20240315-1ubuntu1_amd64.deb ... 528s Unpacking gcc-14-base:amd64 (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 528s Setting up gcc-14-base:amd64 (14-20240315-1ubuntu1) ... 528s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 528s Preparing to unpack .../libgcc-s1_14-20240315-1ubuntu1_amd64.deb ... 528s Unpacking libgcc-s1:amd64 (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 528s Setting up libgcc-s1:amd64 (14-20240315-1ubuntu1) ... 528s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 528s Preparing to unpack .../libstdc++6_14-20240315-1ubuntu1_amd64.deb ... 528s Unpacking libstdc++6:amd64 (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 528s Setting up libstdc++6:amd64 (14-20240315-1ubuntu1) ... 528s dpkg: libnettle8:amd64: dependency problems, but removing anyway as you requested: 528s libhogweed6:amd64 depends on libnettle8. 528s libgnutls30:amd64 depends on libnettle8 (>= 3.9~). 528s libcurl3-gnutls:amd64 depends on libnettle8. 528s libarchive13:amd64 depends on libnettle8. 528s 528s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71868 files and directories currently installed.) 528s Removing libnettle8:amd64 (3.9.1-2) ... 528s Selecting previously unselected package libnettle8t64:amd64. 528s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 528s Preparing to unpack .../libnettle8t64_3.9.1-2.2_amd64.deb ... 528s Unpacking libnettle8t64:amd64 (3.9.1-2.2) ... 528s Setting up libnettle8t64:amd64 (3.9.1-2.2) ... 528s dpkg: libhogweed6:amd64: dependency problems, but removing anyway as you requested: 528s libjcat1:amd64 depends on libhogweed6. 528s libgnutls30:amd64 depends on libhogweed6 (>= 3.6). 528s 528s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71869 files and directories currently installed.) 528s Removing libhogweed6:amd64 (3.9.1-2) ... 528s Selecting previously unselected package libhogweed6t64:amd64. 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71864 files and directories currently installed.) 529s Preparing to unpack .../libhogweed6t64_3.9.1-2.2_amd64.deb ... 529s Unpacking libhogweed6t64:amd64 (3.9.1-2.2) ... 529s Setting up libhogweed6t64:amd64 (3.9.1-2.2) ... 529s dpkg: libgnutls30:amd64: dependency problems, but removing anyway as you requested: 529s libldap2:amd64 depends on libgnutls30 (>= 3.8.2). 529s libjcat1:amd64 depends on libgnutls30 (>= 3.7.3). 529s libcurl3-gnutls:amd64 depends on libgnutls30 (>= 3.8.2). 529s fwupd depends on libgnutls30 (>= 3.7.3). 529s dirmngr depends on libgnutls30 (>= 3.8.1). 529s apt depends on libgnutls30 (>= 3.8.1). 529s 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71870 files and directories currently installed.) 529s Removing libgnutls30:amd64 (3.8.3-1ubuntu1) ... 529s Selecting previously unselected package libgnutls30t64:amd64. 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71861 files and directories currently installed.) 529s Preparing to unpack .../libgnutls30t64_3.8.3-1.1ubuntu2_amd64.deb ... 529s Unpacking libgnutls30t64:amd64 (3.8.3-1.1ubuntu2) ... 529s Setting up libgnutls30t64:amd64 (3.8.3-1.1ubuntu2) ... 529s dpkg: libcurl3-gnutls:amd64: dependency problems, but removing anyway as you requested: 529s libfwupd2:amd64 depends on libcurl3-gnutls (>= 7.63.0). 529s fwupd depends on libcurl3-gnutls (>= 7.63.0). 529s 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71889 files and directories currently installed.) 529s Removing libcurl3-gnutls:amd64 (8.5.0-2ubuntu2) ... 529s Selecting previously unselected package libcurl3t64-gnutls:amd64. 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71882 files and directories currently installed.) 529s Preparing to unpack .../libcurl3t64-gnutls_8.5.0-2ubuntu8_amd64.deb ... 529s Unpacking libcurl3t64-gnutls:amd64 (8.5.0-2ubuntu8) ... 529s Preparing to unpack .../apt-utils_2.7.14_amd64.deb ... 529s Unpacking apt-utils (2.7.14) over (2.7.12) ... 529s dpkg: libapt-pkg6.0:amd64: dependency problems, but removing anyway as you requested: 529s ubuntu-pro-client depends on libapt-pkg6.0 (>= 1.9~). 529s python3-apt depends on libapt-pkg6.0 (>= 2.7.11). 529s apt depends on libapt-pkg6.0 (>= 2.7.12). 529s 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71889 files and directories currently installed.) 529s Removing libapt-pkg6.0:amd64 (2.7.12) ... 529s Selecting previously unselected package libapt-pkg6.0t64:amd64. 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71840 files and directories currently installed.) 529s Preparing to unpack .../libapt-pkg6.0t64_2.7.14_amd64.deb ... 529s Unpacking libapt-pkg6.0t64:amd64 (2.7.14) ... 529s Setting up libapt-pkg6.0t64:amd64 (2.7.14) ... 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71890 files and directories currently installed.) 529s Preparing to unpack .../archives/apt_2.7.14_amd64.deb ... 529s Unpacking apt (2.7.14) over (2.7.12) ... 529s Setting up apt (2.7.14) ... 530s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71890 files and directories currently installed.) 530s Preparing to unpack .../ubuntu-pro-client-l10n_31.2.2_amd64.deb ... 530s Unpacking ubuntu-pro-client-l10n (31.2.2) over (31.1) ... 530s Preparing to unpack .../ubuntu-pro-client_31.2.2_amd64.deb ... 530s Unpacking ubuntu-pro-client (31.2.2) over (31.1) ... 530s Preparing to unpack .../keyboxd_2.4.4-2ubuntu15_amd64.deb ... 530s Unpacking keyboxd (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 530s dpkg: libnpth0:amd64: dependency problems, but removing anyway as you requested: 530s gpgv depends on libnpth0 (>= 0.90). 530s gpgsm depends on libnpth0 (>= 0.90). 530s gpg-agent depends on libnpth0 (>= 0.90). 530s gpg depends on libnpth0 (>= 0.90). 530s dirmngr depends on libnpth0 (>= 0.90). 530s 530s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71890 files and directories currently installed.) 530s Removing libnpth0:amd64 (1.6-3build2) ... 530s Selecting previously unselected package libnpth0t64:amd64. 530s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71885 files and directories currently installed.) 530s Preparing to unpack .../libnpth0t64_1.6-3.1_amd64.deb ... 530s Unpacking libnpth0t64:amd64 (1.6-3.1) ... 530s Setting up libnpth0t64:amd64 (1.6-3.1) ... 531s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71891 files and directories currently installed.) 531s Preparing to unpack .../gpgv_2.4.4-2ubuntu15_amd64.deb ... 531s Unpacking gpgv (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 531s Setting up gpgv (2.4.4-2ubuntu15) ... 531s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71891 files and directories currently installed.) 531s Preparing to unpack .../gpg_2.4.4-2ubuntu15_amd64.deb ... 531s Unpacking gpg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 531s Preparing to unpack .../gpg-wks-client_2.4.4-2ubuntu15_amd64.deb ... 531s Unpacking gpg-wks-client (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 531s Preparing to unpack .../gnupg-utils_2.4.4-2ubuntu15_amd64.deb ... 531s Unpacking gnupg-utils (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 531s Preparing to unpack .../gpg-agent_2.4.4-2ubuntu15_amd64.deb ... 531s Unpacking gpg-agent (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 531s Preparing to unpack .../gpgsm_2.4.4-2ubuntu15_amd64.deb ... 531s Unpacking gpgsm (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 531s dpkg: libreadline8:amd64: dependency problems, but removing anyway as you requested: 531s gpgconf depends on libreadline8 (>= 6.0). 531s gawk depends on libreadline8 (>= 6.0). 531s fdisk depends on libreadline8 (>= 6.0). 531s 531s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71891 files and directories currently installed.) 531s Removing libreadline8:amd64 (8.2-3) ... 531s Selecting previously unselected package libreadline8t64:amd64. 531s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71879 files and directories currently installed.) 531s Preparing to unpack .../libreadline8t64_8.2-4_amd64.deb ... 531s Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 531s Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 531s Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 531s Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 531s Unpacking libreadline8t64:amd64 (8.2-4) ... 531s Setting up libreadline8t64:amd64 (8.2-4) ... 531s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71899 files and directories currently installed.) 531s Preparing to unpack .../0-gawk_1%3a5.2.1-2build2_amd64.deb ... 531s Unpacking gawk (1:5.2.1-2build2) over (1:5.2.1-2) ... 531s Preparing to unpack .../1-fdisk_2.39.3-9ubuntu2_amd64.deb ... 531s Unpacking fdisk (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 531s Preparing to unpack .../2-gpgconf_2.4.4-2ubuntu15_amd64.deb ... 531s Unpacking gpgconf (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 531s Preparing to unpack .../3-dirmngr_2.4.4-2ubuntu15_amd64.deb ... 531s Unpacking dirmngr (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 531s Preparing to unpack .../4-gnupg_2.4.4-2ubuntu15_all.deb ... 531s Unpacking gnupg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 531s Preparing to unpack .../5-python3-apt_2.7.7_amd64.deb ... 531s Unpacking python3-apt (2.7.7) over (2.7.6) ... 531s Preparing to unpack .../6-dpkg_1.22.6ubuntu5_amd64.deb ... 531s Unpacking dpkg (1.22.6ubuntu5) over (1.22.4ubuntu5) ... 531s Setting up dpkg (1.22.6ubuntu5) ... 532s Setting up libpython3.12-minimal:amd64 (3.12.2-4build3) ... 532s Setting up python3.12-minimal (3.12.2-4build3) ... 533s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71897 files and directories currently installed.) 533s Preparing to unpack .../python3-minimal_3.12.2-0ubuntu1_amd64.deb ... 533s Unpacking python3-minimal (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 533s Setting up python3-minimal (3.12.2-0ubuntu1) ... 533s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71897 files and directories currently installed.) 533s Preparing to unpack .../python3_3.12.2-0ubuntu1_amd64.deb ... 533s Unpacking python3 (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 533s Preparing to unpack .../libpython3-stdlib_3.12.2-0ubuntu1_amd64.deb ... 533s Unpacking libpython3-stdlib:amd64 (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 533s Preparing to unpack .../libsmartcols1_2.39.3-9ubuntu2_amd64.deb ... 533s Unpacking libsmartcols1:amd64 (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 533s Setting up libsmartcols1:amd64 (2.39.3-9ubuntu2) ... 533s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71897 files and directories currently installed.) 533s Preparing to unpack .../00-bsdextrautils_2.39.3-9ubuntu2_amd64.deb ... 533s Unpacking bsdextrautils (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 533s Preparing to unpack .../01-groff-base_1.23.0-3build1_amd64.deb ... 533s Unpacking groff-base (1.23.0-3build1) over (1.23.0-3) ... 533s Preparing to unpack .../02-pinentry-curses_1.2.1-3ubuntu4_amd64.deb ... 533s Unpacking pinentry-curses (1.2.1-3ubuntu4) over (1.2.1-3ubuntu1) ... 533s Preparing to unpack .../03-readline-common_8.2-4_all.deb ... 533s Unpacking readline-common (8.2-4) over (8.2-3) ... 533s Preparing to unpack .../04-libvolume-key1_0.3.12-7build1_amd64.deb ... 533s Unpacking libvolume-key1:amd64 (0.3.12-7build1) over (0.3.12-5build2) ... 533s Preparing to unpack .../05-libblockdev-crypto3_3.1.0-1build1_amd64.deb ... 533s Unpacking libblockdev-crypto3:amd64 (3.1.0-1build1) over (3.1.0-1) ... 533s Preparing to unpack .../06-e2fsprogs-l10n_1.47.0-2.4~exp1ubuntu2_all.deb ... 533s Unpacking e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 533s Preparing to unpack .../07-logsave_1.47.0-2.4~exp1ubuntu2_amd64.deb ... 533s Unpacking logsave (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 533s Preparing to unpack .../08-initramfs-tools_0.142ubuntu23_all.deb ... 533s Unpacking initramfs-tools (0.142ubuntu23) over (0.142ubuntu20) ... 533s Preparing to unpack .../09-initramfs-tools-core_0.142ubuntu23_all.deb ... 533s Unpacking initramfs-tools-core (0.142ubuntu23) over (0.142ubuntu20) ... 534s Preparing to unpack .../10-initramfs-tools-bin_0.142ubuntu23_amd64.deb ... 534s Unpacking initramfs-tools-bin (0.142ubuntu23) over (0.142ubuntu20) ... 534s Preparing to unpack .../11-dhcpcd-base_1%3a10.0.6-1ubuntu2_amd64.deb ... 534s Unpacking dhcpcd-base (1:10.0.6-1ubuntu2) over (1:10.0.6-1ubuntu1) ... 534s Preparing to unpack .../12-shared-mime-info_2.4-1build1_amd64.deb ... 534s Unpacking shared-mime-info (2.4-1build1) over (2.4-1) ... 534s Preparing to unpack .../13-gir1.2-girepository-2.0_1.79.1-1ubuntu6_amd64.deb ... 534s Unpacking gir1.2-girepository-2.0:amd64 (1.79.1-1ubuntu6) over (1.79.1-1) ... 534s Preparing to unpack .../14-gir1.2-glib-2.0_2.79.3-3ubuntu5_amd64.deb ... 534s Unpacking gir1.2-glib-2.0:amd64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 534s Preparing to unpack .../15-libgirepository-1.0-1_1.79.1-1ubuntu6_amd64.deb ... 534s Unpacking libgirepository-1.0-1:amd64 (1.79.1-1ubuntu6) over (1.79.1-1) ... 534s Preparing to unpack .../16-python3-gi_3.47.0-3build1_amd64.deb ... 534s Unpacking python3-gi (3.47.0-3build1) over (3.47.0-3) ... 534s Preparing to unpack .../17-python3-dbus_1.3.2-5build2_amd64.deb ... 534s Unpacking python3-dbus (1.3.2-5build2) over (1.3.2-5build1) ... 534s Selecting previously unselected package libnetplan1:amd64. 534s Preparing to unpack .../18-libnetplan1_1.0-1_amd64.deb ... 534s Unpacking libnetplan1:amd64 (1.0-1) ... 534s Preparing to unpack .../19-python3-netplan_1.0-1_amd64.deb ... 534s Unpacking python3-netplan (1.0-1) over (0.107.1-3) ... 534s Preparing to unpack .../20-netplan-generator_1.0-1_amd64.deb ... 534s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 534s Unpacking netplan-generator (1.0-1) over (0.107.1-3) ... 534s Preparing to unpack .../21-netplan.io_1.0-1_amd64.deb ... 534s Unpacking netplan.io (1.0-1) over (0.107.1-3) ... 534s Preparing to unpack .../22-libxmlb2_0.3.15-1build1_amd64.deb ... 534s Unpacking libxmlb2:amd64 (0.3.15-1build1) over (0.3.15-1) ... 534s Preparing to unpack .../23-libqrtr-glib0_1.2.2-1ubuntu3_amd64.deb ... 534s Unpacking libqrtr-glib0:amd64 (1.2.2-1ubuntu3) over (1.2.2-1ubuntu2) ... 534s Preparing to unpack .../24-libqmi-glib5_1.35.2-0ubuntu1_amd64.deb ... 534s Unpacking libqmi-glib5:amd64 (1.35.2-0ubuntu1) over (1.34.0-2) ... 534s Preparing to unpack .../25-libqmi-proxy_1.35.2-0ubuntu1_amd64.deb ... 534s Unpacking libqmi-proxy (1.35.2-0ubuntu1) over (1.34.0-2) ... 534s Preparing to unpack .../26-libpolkit-agent-1-0_124-1ubuntu1_amd64.deb ... 534s Unpacking libpolkit-agent-1-0:amd64 (124-1ubuntu1) over (124-1) ... 534s Preparing to unpack .../27-libpolkit-gobject-1-0_124-1ubuntu1_amd64.deb ... 534s Unpacking libpolkit-gobject-1-0:amd64 (124-1ubuntu1) over (124-1) ... 534s Preparing to unpack .../28-libmm-glib0_1.23.4-0ubuntu1_amd64.deb ... 534s Unpacking libmm-glib0:amd64 (1.23.4-0ubuntu1) over (1.22.0-3) ... 534s Preparing to unpack .../29-libmbim-glib4_1.31.2-0ubuntu2_amd64.deb ... 534s Unpacking libmbim-glib4:amd64 (1.31.2-0ubuntu2) over (1.30.0-1) ... 534s Preparing to unpack .../30-libmbim-proxy_1.31.2-0ubuntu2_amd64.deb ... 534s Unpacking libmbim-proxy (1.31.2-0ubuntu2) over (1.30.0-1) ... 534s Preparing to unpack .../31-libjson-glib-1.0-common_1.8.0-2build1_all.deb ... 534s Unpacking libjson-glib-1.0-common (1.8.0-2build1) over (1.8.0-2) ... 534s Preparing to unpack .../32-libjson-glib-1.0-0_1.8.0-2build1_amd64.deb ... 534s Unpacking libjson-glib-1.0-0:amd64 (1.8.0-2build1) over (1.8.0-2) ... 534s Preparing to unpack .../33-libjcat1_0.2.0-2build2_amd64.deb ... 534s Unpacking libjcat1:amd64 (0.2.0-2build2) over (0.2.0-2) ... 534s Preparing to unpack .../34-libgusb2_0.4.8-1build1_amd64.deb ... 534s Unpacking libgusb2:amd64 (0.4.8-1build1) over (0.4.8-1) ... 534s Preparing to unpack .../35-libgudev-1.0-0_1%3a238-3ubuntu2_amd64.deb ... 534s Unpacking libgudev-1.0-0:amd64 (1:238-3ubuntu2) over (1:238-3) ... 534s Preparing to unpack .../36-libfwupd2_1.9.15-2_amd64.deb ... 534s Unpacking libfwupd2:amd64 (1.9.15-2) over (1.9.14-1) ... 534s Preparing to unpack .../37-libblockdev3_3.1.0-1build1_amd64.deb ... 534s Unpacking libblockdev3:amd64 (3.1.0-1build1) over (3.1.0-1) ... 535s Preparing to unpack .../38-libblockdev-swap3_3.1.0-1build1_amd64.deb ... 535s Unpacking libblockdev-swap3:amd64 (3.1.0-1build1) over (3.1.0-1) ... 535s Preparing to unpack .../39-libblockdev-part3_3.1.0-1build1_amd64.deb ... 535s Unpacking libblockdev-part3:amd64 (3.1.0-1build1) over (3.1.0-1) ... 535s dpkg: libnvme1: dependency problems, but removing anyway as you requested: 535s libblockdev-nvme3:amd64 depends on libnvme1 (>= 1.7.1). 535s 535s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71901 files and directories currently installed.) 535s Removing libnvme1 (1.8-2) ... 535s Selecting previously unselected package libnvme1t64. 535s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71894 files and directories currently installed.) 535s Preparing to unpack .../libnvme1t64_1.8-3_amd64.deb ... 535s Unpacking libnvme1t64 (1.8-3) ... 535s Preparing to unpack .../libblockdev-nvme3_3.1.0-1build1_amd64.deb ... 535s Unpacking libblockdev-nvme3:amd64 (3.1.0-1build1) over (3.1.0-1) ... 535s Preparing to unpack .../libblockdev-mdraid3_3.1.0-1build1_amd64.deb ... 535s Unpacking libblockdev-mdraid3:amd64 (3.1.0-1build1) over (3.1.0-1) ... 535s Preparing to unpack .../libblockdev-loop3_3.1.0-1build1_amd64.deb ... 535s Unpacking libblockdev-loop3:amd64 (3.1.0-1build1) over (3.1.0-1) ... 535s dpkg: libarchive13:amd64: dependency problems, but removing anyway as you requested: 535s fwupd depends on libarchive13 (>= 3.2.1). 535s 535s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71902 files and directories currently installed.) 535s Removing libarchive13:amd64 (3.7.2-1ubuntu2) ... 535s Selecting previously unselected package libarchive13t64:amd64. 535s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71896 files and directories currently installed.) 535s Preparing to unpack .../libarchive13t64_3.7.2-1.1ubuntu2_amd64.deb ... 535s Unpacking libarchive13t64:amd64 (3.7.2-1.1ubuntu2) ... 535s Preparing to unpack .../fwupd_1.9.15-2_amd64.deb ... 535s Unpacking fwupd (1.9.15-2) over (1.9.14-1) ... 535s Preparing to unpack .../bolt_0.9.6-2build1_amd64.deb ... 535s Unpacking bolt (0.9.6-2build1) over (0.9.6-2) ... 535s dpkg: libglib2.0-0:amd64: dependency problems, but removing anyway as you requested: 535s libnetplan0:amd64 depends on libglib2.0-0 (>= 2.75.3). 535s libblockdev-fs3:amd64 depends on libglib2.0-0 (>= 2.42.2). 535s 535s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71903 files and directories currently installed.) 535s Removing libglib2.0-0:amd64 (2.79.2-1~ubuntu1) ... 535s Selecting previously unselected package libglib2.0-0t64:amd64. 535s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71878 files and directories currently installed.) 535s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_amd64.deb ... 535s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:amd64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 535s removed '/var/lib/dpkg/info/libglib2.0-0:amd64.postrm' 535s Unpacking libglib2.0-0t64:amd64 (2.79.3-3ubuntu5) ... 535s Preparing to unpack .../libblockdev-fs3_3.1.0-1build1_amd64.deb ... 535s Unpacking libblockdev-fs3:amd64 (3.1.0-1build1) over (3.1.0-1) ... 535s dpkg: libreiserfscore0: dependency problems, but removing anyway as you requested: 535s btrfs-progs depends on libreiserfscore0 (>= 1:3.6.27). 535s 535s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71903 files and directories currently installed.) 535s Removing libreiserfscore0 (1:3.6.27-7) ... 536s Selecting previously unselected package libreiserfscore0t64. 536s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71898 files and directories currently installed.) 536s Preparing to unpack .../libreiserfscore0t64_1%3a3.6.27-7.1_amd64.deb ... 536s Unpacking libreiserfscore0t64 (1:3.6.27-7.1) ... 536s Preparing to unpack .../btrfs-progs_6.6.3-1.1build1_amd64.deb ... 536s Unpacking btrfs-progs (6.6.3-1.1build1) over (6.6.3-1.1) ... 536s dpkg: libext2fs2:amd64: dependency problems, but removing anyway as you requested: 536s e2fsprogs depends on libext2fs2 (= 1.47.0-2ubuntu1). 536s 536s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71904 files and directories currently installed.) 536s Removing libext2fs2:amd64 (1.47.0-2ubuntu1) ... 536s Selecting previously unselected package libext2fs2t64:amd64. 536s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71897 files and directories currently installed.) 536s Preparing to unpack .../libext2fs2t64_1.47.0-2.4~exp1ubuntu2_amd64.deb ... 536s Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' 536s Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' 536s Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' 536s Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' 536s Unpacking libext2fs2t64:amd64 (1.47.0-2.4~exp1ubuntu2) ... 536s Setting up libcom-err2:amd64 (1.47.0-2.4~exp1ubuntu2) ... 536s Setting up libext2fs2t64:amd64 (1.47.0-2.4~exp1ubuntu2) ... 536s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71913 files and directories currently installed.) 536s Preparing to unpack .../e2fsprogs_1.47.0-2.4~exp1ubuntu2_amd64.deb ... 536s Unpacking e2fsprogs (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 536s Preparing to unpack .../libxml2_2.9.14+dfsg-1.3ubuntu2_amd64.deb ... 536s Unpacking libxml2:amd64 (2.9.14+dfsg-1.3ubuntu2) over (2.9.14+dfsg-1.3ubuntu1) ... 536s Preparing to unpack .../libbpf1_1%3a1.3.0-2build1_amd64.deb ... 536s Unpacking libbpf1:amd64 (1:1.3.0-2build1) over (1:1.3.0-2) ... 536s dpkg: libelf1:amd64: dependency problems, but removing anyway as you requested: 536s linux-headers-6.8.0-11-generic depends on libelf1 (>= 0.144). 536s iproute2 depends on libelf1 (>= 0.131). 536s 536s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71913 files and directories currently installed.) 536s Removing libelf1:amd64 (0.190-1) ... 536s Selecting previously unselected package libelf1t64:amd64. 536s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71908 files and directories currently installed.) 536s Preparing to unpack .../libelf1t64_0.190-1.1build2_amd64.deb ... 536s Unpacking libelf1t64:amd64 (0.190-1.1build2) ... 536s Preparing to unpack .../libtirpc-common_1.3.4+ds-1.1_all.deb ... 536s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 536s Preparing to unpack .../lsof_4.95.0-1build2_amd64.deb ... 536s Unpacking lsof (4.95.0-1build2) over (4.95.0-1build1) ... 536s Preparing to unpack .../libnsl2_1.3.0-3build2_amd64.deb ... 536s Unpacking libnsl2:amd64 (1.3.0-3build2) over (1.3.0-3) ... 536s dpkg: libtirpc3:amd64: dependency problems, but removing anyway as you requested: 536s iproute2 depends on libtirpc3 (>= 1.0.2). 536s 536s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71913 files and directories currently installed.) 536s Removing libtirpc3:amd64 (1.3.4+ds-1build1) ... 536s Selecting previously unselected package libtirpc3t64:amd64. 536s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71907 files and directories currently installed.) 536s Preparing to unpack .../00-libtirpc3t64_1.3.4+ds-1.1_amd64.deb ... 536s Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 536s Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 536s Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.1) ... 536s Preparing to unpack .../01-iproute2_6.1.0-1ubuntu5_amd64.deb ... 536s Unpacking iproute2 (6.1.0-1ubuntu5) over (6.1.0-1ubuntu2) ... 536s Preparing to unpack .../02-python3-yaml_6.0.1-2build1_amd64.deb ... 536s Unpacking python3-yaml (6.0.1-2build1) over (6.0.1-2) ... 536s Preparing to unpack .../03-libusb-1.0-0_2%3a1.0.27-1_amd64.deb ... 536s Unpacking libusb-1.0-0:amd64 (2:1.0.27-1) over (2:1.0.26-1) ... 536s Preparing to unpack .../04-libprotobuf-c1_1.4.1-1ubuntu3_amd64.deb ... 536s Unpacking libprotobuf-c1:amd64 (1.4.1-1ubuntu3) over (1.4.1-1ubuntu2) ... 537s Preparing to unpack .../05-libnghttp2-14_1.59.0-1build1_amd64.deb ... 537s Unpacking libnghttp2-14:amd64 (1.59.0-1build1) over (1.59.0-1) ... 537s Preparing to unpack .../06-libssh-4_0.10.6-2build1_amd64.deb ... 537s Unpacking libssh-4:amd64 (0.10.6-2build1) over (0.10.6-2) ... 537s Preparing to unpack .../07-libsasl2-2_2.1.28+dfsg1-5ubuntu1_amd64.deb ... 537s Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 537s Preparing to unpack .../08-libldap2_2.6.7+dfsg-1~exp1ubuntu6_amd64.deb ... 537s Unpacking libldap2:amd64 (2.6.7+dfsg-1~exp1ubuntu6) over (2.6.7+dfsg-1~exp1ubuntu1) ... 537s Preparing to unpack .../09-libfido2-1_1.14.0-1build1_amd64.deb ... 537s Unpacking libfido2-1:amd64 (1.14.0-1build1) over (1.14.0-1) ... 537s Preparing to unpack .../10-libproc2-0_2%3a4.0.4-4ubuntu2_amd64.deb ... 537s Unpacking libproc2-0:amd64 (2:4.0.4-4ubuntu2) over (2:4.0.4-4ubuntu1) ... 537s Preparing to unpack .../11-procps_2%3a4.0.4-4ubuntu2_amd64.deb ... 537s Unpacking procps (2:4.0.4-4ubuntu2) over (2:4.0.4-4ubuntu1) ... 537s Preparing to unpack .../12-libsasl2-modules_2.1.28+dfsg1-5ubuntu1_amd64.deb ... 537s Unpacking libsasl2-modules:amd64 (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 537s dpkg: libuv1:amd64: dependency problems, but removing anyway as you requested: 537s bind9-libs:amd64 depends on libuv1 (>= 1.40.0). 537s 537s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71918 files and directories currently installed.) 537s Removing libuv1:amd64 (1.48.0-1) ... 537s Selecting previously unselected package libuv1t64:amd64. 537s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71913 files and directories currently installed.) 537s Preparing to unpack .../libuv1t64_1.48.0-1.1_amd64.deb ... 537s Unpacking libuv1t64:amd64 (1.48.0-1.1) ... 537s Preparing to unpack .../bind9-host_1%3a9.18.24-0ubuntu3_amd64.deb ... 537s Unpacking bind9-host (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 537s Preparing to unpack .../bind9-dnsutils_1%3a9.18.24-0ubuntu3_amd64.deb ... 537s Unpacking bind9-dnsutils (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 537s Preparing to unpack .../bind9-libs_1%3a9.18.24-0ubuntu3_amd64.deb ... 537s Unpacking bind9-libs:amd64 (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 537s Preparing to unpack .../coreutils_9.4-3ubuntu3_amd64.deb ... 537s Unpacking coreutils (9.4-3ubuntu3) over (9.4-2ubuntu4) ... 537s Setting up coreutils (9.4-3ubuntu3) ... 537s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71919 files and directories currently installed.) 537s Preparing to unpack .../util-linux_2.39.3-9ubuntu2_amd64.deb ... 537s Unpacking util-linux (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 537s Setting up util-linux (2.39.3-9ubuntu2) ... 538s fstrim.service is a disabled or a static unit not running, not starting it. 538s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71914 files and directories currently installed.) 538s Preparing to unpack .../file_1%3a5.45-3_amd64.deb ... 538s Unpacking file (1:5.45-3) over (1:5.45-2) ... 538s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71904 files and directories currently installed.) 538s Preparing to unpack .../libmagic-mgc_1%3a5.45-3_amd64.deb ... 538s Unpacking libmagic-mgc (1:5.45-3) over (1:5.45-2) ... 538s Selecting previously unselected package libmagic1t64:amd64. 538s Preparing to unpack .../libmagic1t64_1%3a5.45-3_amd64.deb ... 538s Unpacking libmagic1t64:amd64 (1:5.45-3) ... 538s Preparing to unpack .../libplymouth5_24.004.60-1ubuntu6_amd64.deb ... 538s Unpacking libplymouth5:amd64 (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 538s Preparing to unpack .../libfreetype6_2.13.2+dfsg-1build2_amd64.deb ... 538s Unpacking libfreetype6:amd64 (2.13.2+dfsg-1build2) over (2.13.2+dfsg-1) ... 538s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71905 files and directories currently installed.) 538s Preparing to unpack .../libpng16-16t64_1.6.43-3_amd64.deb ... 538s Unpacking libpng16-16t64:amd64 (1.6.43-3) ... 539s Preparing to unpack .../multipath-tools_0.9.4-5ubuntu6_amd64.deb ... 539s Unpacking multipath-tools (0.9.4-5ubuntu6) over (0.9.4-5ubuntu3) ... 539s dpkg: liburcu8:amd64: dependency problems, but removing anyway as you requested: 539s xfsprogs depends on liburcu8 (>= 0.13.0). 539s 539s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71916 files and directories currently installed.) 539s Preparing to unpack .../libsemanage2_3.5-1build4_amd64.deb ... 539s Unpacking libsemanage2:amd64 (3.5-1build4) over (3.5-1build2) ... 539s Setting up libsemanage2:amd64 (3.5-1build4) ... 539s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71916 files and directories currently installed.) 539s Preparing to unpack .../install-info_7.1-3build1_amd64.deb ... 539s Unpacking install-info (7.1-3build1) over (7.1-3) ... 539s Setting up install-info (7.1-3build1) ... 539s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71916 files and directories currently installed.) 539s Preparing to unpack .../00-gcc-13-base_13.2.0-21ubuntu1_amd64.deb ... 539s Unpacking gcc-13-base:amd64 (13.2.0-21ubuntu1) over (13.2.0-17ubuntu2) ... 539s Preparing to unpack .../01-libss2_1.47.0-2.4~exp1ubuntu2_amd64.deb ... 539s Unpacking libss2:amd64 (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 539s Preparing to unpack .../02-dmsetup_2%3a1.02.185-3ubuntu2_amd64.deb ... 539s Unpacking dmsetup (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ... 539s Preparing to unpack .../03-eject_2.39.3-9ubuntu2_amd64.deb ... 539s Unpacking eject (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 539s Preparing to unpack .../04-krb5-locales_1.20.1-6ubuntu1_all.deb ... 539s Unpacking krb5-locales (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 539s Preparing to unpack .../05-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 539s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 539s Preparing to unpack .../06-libslang2_2.3.3-3build1_amd64.deb ... 539s Unpacking libslang2:amd64 (2.3.3-3build1) over (2.3.3-3) ... 539s Preparing to unpack .../07-libtext-charwidth-perl_0.04-11build2_amd64.deb ... 539s Unpacking libtext-charwidth-perl:amd64 (0.04-11build2) over (0.04-11build1) ... 540s Preparing to unpack .../08-libtext-iconv-perl_1.7-8build2_amd64.deb ... 540s Unpacking libtext-iconv-perl:amd64 (1.7-8build2) over (1.7-8build1) ... 540s Preparing to unpack .../09-python-apt-common_2.7.7_all.deb ... 540s Unpacking python-apt-common (2.7.7) over (2.7.6) ... 540s Preparing to unpack .../10-python3-setuptools_68.1.2-2ubuntu1_all.deb ... 540s Unpacking python3-setuptools (68.1.2-2ubuntu1) over (68.1.2-2) ... 540s Preparing to unpack .../11-python3-pkg-resources_68.1.2-2ubuntu1_all.deb ... 540s Unpacking python3-pkg-resources (68.1.2-2ubuntu1) over (68.1.2-2) ... 540s Preparing to unpack .../12-rsyslog_8.2312.0-3ubuntu7_amd64.deb ... 540s Unpacking rsyslog (8.2312.0-3ubuntu7) over (8.2312.0-3ubuntu3) ... 540s Preparing to unpack .../13-vim-tiny_2%3a9.1.0016-1ubuntu6_amd64.deb ... 540s Unpacking vim-tiny (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 540s Preparing to unpack .../14-vim-common_2%3a9.1.0016-1ubuntu6_all.deb ... 540s Unpacking vim-common (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 540s Selecting previously unselected package xdg-user-dirs. 540s Preparing to unpack .../15-xdg-user-dirs_0.18-1_amd64.deb ... 540s Unpacking xdg-user-dirs (0.18-1) ... 540s Preparing to unpack .../16-xxd_2%3a9.1.0016-1ubuntu6_amd64.deb ... 540s Unpacking xxd (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 540s Preparing to unpack .../17-apparmor_4.0.0-beta3-0ubuntu2_amd64.deb ... 541s Unpacking apparmor (4.0.0-beta3-0ubuntu2) over (4.0.0~alpha4-0ubuntu1) ... 541s Preparing to unpack .../18-ftp_20230507-2build1_all.deb ... 541s Unpacking ftp (20230507-2build1) over (20230507-2) ... 541s Preparing to unpack .../19-inetutils-telnet_2%3a2.5-3ubuntu3_amd64.deb ... 541s Unpacking inetutils-telnet (2:2.5-3ubuntu3) over (2:2.5-3ubuntu1) ... 541s Preparing to unpack .../20-info_7.1-3build1_amd64.deb ... 541s Unpacking info (7.1-3build1) over (7.1-3) ... 541s Preparing to unpack .../21-libxmuu1_2%3a1.1.3-3build1_amd64.deb ... 541s Unpacking libxmuu1:amd64 (2:1.1.3-3build1) over (2:1.1.3-3) ... 541s Preparing to unpack .../22-lshw_02.19.git.2021.06.19.996aaad9c7-2build2_amd64.deb ... 541s Unpacking lshw (02.19.git.2021.06.19.996aaad9c7-2build2) over (02.19.git.2021.06.19.996aaad9c7-2build1) ... 541s Selecting previously unselected package manpages. 541s Preparing to unpack .../23-manpages_6.05.01-1_all.deb ... 541s Unpacking manpages (6.05.01-1) ... 541s Preparing to unpack .../24-mtr-tiny_0.95-1.1build1_amd64.deb ... 541s Unpacking mtr-tiny (0.95-1.1build1) over (0.95-1.1) ... 541s Preparing to unpack .../25-plymouth-theme-ubuntu-text_24.004.60-1ubuntu6_amd64.deb ... 541s Unpacking plymouth-theme-ubuntu-text (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 541s Preparing to unpack .../26-plymouth_24.004.60-1ubuntu6_amd64.deb ... 542s Unpacking plymouth (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 542s Preparing to unpack .../27-telnet_0.17+2.5-3ubuntu3_all.deb ... 542s Unpacking telnet (0.17+2.5-3ubuntu3) over (0.17+2.5-3ubuntu1) ... 542s Preparing to unpack .../28-usb.ids_2024.03.18-1_all.deb ... 542s Unpacking usb.ids (2024.03.18-1) over (2024.01.30-1) ... 542s Preparing to unpack .../29-xz-utils_5.6.0-0.2_amd64.deb ... 542s Unpacking xz-utils (5.6.0-0.2) over (5.4.5-0.3) ... 542s Selecting previously unselected package libllvm18:amd64. 542s Preparing to unpack .../30-libllvm18_1%3a18.1.2-1ubuntu2_amd64.deb ... 542s Unpacking libllvm18:amd64 (1:18.1.2-1ubuntu2) ... 542s Selecting previously unselected package libclang-cpp18. 542s Preparing to unpack .../31-libclang-cpp18_1%3a18.1.2-1ubuntu2_amd64.deb ... 542s Unpacking libclang-cpp18 (1:18.1.2-1ubuntu2) ... 543s Selecting previously unselected package libbpfcc:amd64. 543s Preparing to unpack .../32-libbpfcc_0.29.1+ds-1ubuntu4_amd64.deb ... 543s Unpacking libbpfcc:amd64 (0.29.1+ds-1ubuntu4) ... 543s Selecting previously unselected package python3-bpfcc. 543s Preparing to unpack .../33-python3-bpfcc_0.29.1+ds-1ubuntu4_all.deb ... 543s Unpacking python3-bpfcc (0.29.1+ds-1ubuntu4) ... 543s Selecting previously unselected package ieee-data. 543s Preparing to unpack .../34-ieee-data_20220827.1_all.deb ... 543s Unpacking ieee-data (20220827.1) ... 543s Selecting previously unselected package python3-netaddr. 543s Preparing to unpack .../35-python3-netaddr_0.8.0-2ubuntu1_all.deb ... 543s Unpacking python3-netaddr (0.8.0-2ubuntu1) ... 543s Selecting previously unselected package bpfcc-tools. 543s Preparing to unpack .../36-bpfcc-tools_0.29.1+ds-1ubuntu4_all.deb ... 543s Unpacking bpfcc-tools (0.29.1+ds-1ubuntu4) ... 543s Selecting previously unselected package libclang1-18. 543s Preparing to unpack .../37-libclang1-18_1%3a18.1.2-1ubuntu2_amd64.deb ... 543s Unpacking libclang1-18 (1:18.1.2-1ubuntu2) ... 543s Selecting previously unselected package libdw1t64:amd64. 543s Preparing to unpack .../38-libdw1t64_0.190-1.1build2_amd64.deb ... 543s Unpacking libdw1t64:amd64 (0.190-1.1build2) ... 543s Selecting previously unselected package bpftrace. 543s Preparing to unpack .../39-bpftrace_0.20.2-1ubuntu1_amd64.deb ... 543s Unpacking bpftrace (0.20.2-1ubuntu1) ... 543s Preparing to unpack .../40-cryptsetup-bin_2%3a2.7.0-1ubuntu2_amd64.deb ... 543s Unpacking cryptsetup-bin (2:2.7.0-1ubuntu2) over (2:2.7.0-1ubuntu1) ... 543s Preparing to unpack .../41-dpkg-dev_1.22.6ubuntu5_all.deb ... 543s Unpacking dpkg-dev (1.22.6ubuntu5) over (1.22.4ubuntu5) ... 543s Preparing to unpack .../42-libdpkg-perl_1.22.6ubuntu5_all.deb ... 543s Unpacking libdpkg-perl (1.22.6ubuntu5) over (1.22.4ubuntu5) ... 543s Selecting previously unselected package fonts-dejavu-mono. 543s Preparing to unpack .../43-fonts-dejavu-mono_2.37-8_all.deb ... 543s Unpacking fonts-dejavu-mono (2.37-8) ... 543s Selecting previously unselected package fonts-dejavu-core. 543s Preparing to unpack .../44-fonts-dejavu-core_2.37-8_all.deb ... 543s Unpacking fonts-dejavu-core (2.37-8) ... 543s Selecting previously unselected package fontconfig-config. 543s Preparing to unpack .../45-fontconfig-config_2.15.0-1.1ubuntu1_amd64.deb ... 544s Unpacking fontconfig-config (2.15.0-1.1ubuntu1) ... 544s Preparing to unpack .../46-gnupg-l10n_2.4.4-2ubuntu15_all.deb ... 544s Unpacking gnupg-l10n (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 544s Preparing to unpack .../47-grub2-common_2.12-1ubuntu5_amd64.deb ... 544s Unpacking grub2-common (2.12-1ubuntu5) over (2.12-1ubuntu4) ... 544s Preparing to unpack .../48-grub-pc_2.12-1ubuntu5_amd64.deb ... 544s Unpacking grub-pc (2.12-1ubuntu5) over (2.12-1ubuntu4) ... 544s Preparing to unpack .../49-grub-pc-bin_2.12-1ubuntu5_amd64.deb ... 544s Unpacking grub-pc-bin (2.12-1ubuntu5) over (2.12-1ubuntu4) ... 544s Preparing to unpack .../50-grub-common_2.12-1ubuntu5_amd64.deb ... 544s Unpacking grub-common (2.12-1ubuntu5) over (2.12-1ubuntu4) ... 544s Selecting previously unselected package hwdata. 544s Preparing to unpack .../51-hwdata_0.379-1_all.deb ... 544s Unpacking hwdata (0.379-1) ... 544s Preparing to unpack .../52-libibverbs1_50.0-2build1_amd64.deb ... 544s Unpacking libibverbs1:amd64 (50.0-2build1) over (50.0-2) ... 544s Preparing to unpack .../53-ibverbs-providers_50.0-2build1_amd64.deb ... 544s Unpacking ibverbs-providers:amd64 (50.0-2build1) over (50.0-2) ... 544s Preparing to unpack .../54-jq_1.7.1-3_amd64.deb ... 544s Unpacking jq (1.7.1-3) over (1.7.1-2) ... 545s Preparing to unpack .../55-libjq1_1.7.1-3_amd64.deb ... 545s Unpacking libjq1:amd64 (1.7.1-3) over (1.7.1-2) ... 545s Selecting previously unselected package libaio1t64:amd64. 545s Preparing to unpack .../56-libaio1t64_0.3.113-6_amd64.deb ... 545s Unpacking libaio1t64:amd64 (0.3.113-6) ... 545s Selecting previously unselected package libatm1t64:amd64. 545s Preparing to unpack .../57-libatm1t64_1%3a2.5.1-5.1_amd64.deb ... 545s Unpacking libatm1t64:amd64 (1:2.5.1-5.1) ... 545s Selecting previously unselected package libc-dev-bin. 545s Preparing to unpack .../58-libc-dev-bin_2.39-0ubuntu6_amd64.deb ... 545s Unpacking libc-dev-bin (2.39-0ubuntu6) ... 545s Selecting previously unselected package libfontconfig1:amd64. 545s Preparing to unpack .../59-libfontconfig1_2.15.0-1.1ubuntu1_amd64.deb ... 545s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu1) ... 545s Selecting previously unselected package libjpeg-turbo8:amd64. 545s Preparing to unpack .../60-libjpeg-turbo8_2.1.5-2ubuntu1_amd64.deb ... 545s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 545s Selecting previously unselected package libjpeg8:amd64. 545s Preparing to unpack .../61-libjpeg8_8c-2ubuntu11_amd64.deb ... 545s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 545s Selecting previously unselected package libdeflate0:amd64. 545s Preparing to unpack .../62-libdeflate0_1.19-1_amd64.deb ... 545s Unpacking libdeflate0:amd64 (1.19-1) ... 545s Selecting previously unselected package libjbig0:amd64. 545s Preparing to unpack .../63-libjbig0_2.1-6.1ubuntu1_amd64.deb ... 545s Unpacking libjbig0:amd64 (2.1-6.1ubuntu1) ... 545s Selecting previously unselected package liblerc4:amd64. 545s Preparing to unpack .../64-liblerc4_4.0.0+ds-4ubuntu1_amd64.deb ... 545s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu1) ... 545s Selecting previously unselected package libsharpyuv0:amd64. 545s Preparing to unpack .../65-libsharpyuv0_1.3.2-0.4build2_amd64.deb ... 545s Unpacking libsharpyuv0:amd64 (1.3.2-0.4build2) ... 545s Selecting previously unselected package libwebp7:amd64. 545s Preparing to unpack .../66-libwebp7_1.3.2-0.4build2_amd64.deb ... 545s Unpacking libwebp7:amd64 (1.3.2-0.4build2) ... 545s Selecting previously unselected package libtiff6:amd64. 545s Preparing to unpack .../67-libtiff6_4.5.1+git230720-4ubuntu1_amd64.deb ... 545s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu1) ... 545s Selecting previously unselected package libxpm4:amd64. 545s Preparing to unpack .../68-libxpm4_1%3a3.5.17-1build1_amd64.deb ... 545s Unpacking libxpm4:amd64 (1:3.5.17-1build1) ... 545s Selecting previously unselected package libgd3:amd64. 545s Preparing to unpack .../69-libgd3_2.3.3-9ubuntu3_amd64.deb ... 545s Unpacking libgd3:amd64 (2.3.3-9ubuntu3) ... 545s Selecting 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(1.47.0-2.4~exp1ubuntu2) ... 557s Setting up usb.ids (2024.03.18-1) ... 557s Setting up sudo (1.9.15p5-3ubuntu3) ... 557s Setting up fonts-dejavu-core (2.37-8) ... 557s Setting up dhcpcd-base (1:10.0.6-1ubuntu2) ... 557s Setting up gir1.2-glib-2.0:amd64 (2.79.3-3ubuntu5) ... 557s Setting up libk5crypto3:amd64 (1.20.1-6ubuntu1) ... 557s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu1) ... 557s Setting up logsave (1.47.0-2.4~exp1ubuntu2) ... 557s Setting up libwebp7:amd64 (1.3.2-0.4build2) ... 557s Setting up libfdisk1:amd64 (2.39.3-9ubuntu2) ... 557s Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-6) ... 557s Setting up libblockdev-nvme3:amd64 (3.1.0-1build1) ... 557s Setting up libdevmapper1.02.1:amd64 (2:1.02.185-3ubuntu2) ... 557s Setting up libblockdev-fs3:amd64 (3.1.0-1build1) ... 557s Setting up libaio1t64:amd64 (0.3.113-6) ... 557s Setting up python-apt-common (2.7.7) ... 557s Setting up mount (2.39.3-9ubuntu2) ... 557s Setting up dmsetup (2:1.02.185-3ubuntu2) ... 557s Setting up uuid-runtime (2.39.3-9ubuntu2) ... 557s uuidd.service is a disabled or a static unit not running, not starting it. 557s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu1) ... 557s Setting up groff-base (1.23.0-3build1) ... 557s Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... 558s Setting up libplymouth5:amd64 (24.004.60-1ubuntu6) ... 558s Setting up dbus-session-bus-common (1.14.10-4ubuntu2) ... 558s Setting up kpartx (0.9.4-5ubuntu6) ... 558s Setting up jq (1.7.1-3) ... 558s Setting up procps (2:4.0.4-4ubuntu2) ... 558s Setting up libtss2-tcti-mssim0t64:amd64 (4.0.1-7.1ubuntu4) ... 558s Setting up gpgconf (2.4.4-2ubuntu15) ... 558s Setting up libcryptsetup12:amd64 (2:2.7.0-1ubuntu2) ... 558s Setting up libgirepository-1.0-1:amd64 (1.79.1-1ubuntu6) ... 558s Setting up libjson-glib-1.0-common (1.8.0-2build1) ... 558s Setting up libkrb5-3:amd64 (1.20.1-6ubuntu1) ... 558s Setting up libtss2-tcti-cmd0t64:amd64 (4.0.1-7.1ubuntu4) ... 558s Setting up libpython3.11-minimal:amd64 (3.11.8-1build4) ... 558s Setting up libusb-1.0-0:amd64 (2:1.0.27-1) ... 558s Setting up libperl5.38t64:amd64 (5.38.2-3.2) ... 558s Setting up tnftp (20230507-2build1) ... 558s Setting up sbsigntool (0.9.4-3.1ubuntu5) ... 558s Setting up dbus-system-bus-common (1.14.10-4ubuntu2) ... 558s Setting up libfido2-1:amd64 (1.14.0-1build1) ... 558s Setting up libc-dev-bin (2.39-0ubuntu6) ... 558s Setting up libtss2-tcti-swtpm0t64:amd64 (4.0.1-7.1ubuntu4) ... 558s Setting up openssl (3.0.13-0ubuntu2) ... 558s Setting up linux-modules-6.8.0-20-generic (6.8.0-20.20) ... 560s Setting up readline-common (8.2-4) ... 560s Setting up libxml2:amd64 (2.9.14+dfsg-1.3ubuntu2) ... 560s Setting up libxmuu1:amd64 (2:1.1.3-3build1) ... 560s Setting up dbus-bin (1.14.10-4ubuntu2) ... 560s Setting up info (7.1-3build1) ... 560s Setting up liblocale-gettext-perl (1.07-6ubuntu4) ... 560s Setting up gpg (2.4.4-2ubuntu15) ... 560s Setting up libgudev-1.0-0:amd64 (1:238-3ubuntu2) ... 560s Setting up libpolkit-gobject-1-0:amd64 (124-1ubuntu1) ... 560s Setting up libbpf1:amd64 (1:1.3.0-2build1) ... 560s Setting up libmbim-glib4:amd64 (1.31.2-0ubuntu2) ... 560s Setting up rsync (3.2.7-1build1) ... 561s rsync.service is a disabled or a static unit not running, not starting it. 561s Setting up libudisks2-0:amd64 (2.10.1-6) ... 561s Setting up bolt (0.9.6-2build1) ... 561s bolt.service is a disabled or a static unit not running, not starting it. 561s Setting up libllvm18:amd64 (1:18.1.2-1ubuntu2) ... 561s Setting up gnupg-utils (2.4.4-2ubuntu15) ... 561s Setting up initramfs-tools-bin (0.142ubuntu23) ... 561s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 561s Setting up cryptsetup-bin (2:2.7.0-1ubuntu2) ... 561s Setting up python3.11-minimal (3.11.8-1build4) ... 562s Setting up libclang1-18 (1:18.1.2-1ubuntu2) ... 562s Setting up manpages-dev (6.05.01-1) ... 562s Setting up linux-modules-extra-6.8.0-20-generic (6.8.0-20.20) ... 564s Setting up apt-utils (2.7.14) ... 564s Setting up gpg-agent (2.4.4-2ubuntu15) ... 565s Setting up libpython3.12-stdlib:amd64 (3.12.2-4build3) ... 565s Setting up libblockdev-mdraid3:amd64 (3.1.0-1build1) ... 565s Setting up wget (1.21.4-1ubuntu2) ... 565s Setting up linux-image-6.8.0-20-generic (6.8.0-20.20) ... 567s I: /boot/vmlinuz is now a symlink to vmlinuz-6.8.0-20-generic 567s I: /boot/initrd.img is now a symlink to initrd.img-6.8.0-20-generic 567s Setting up libblockdev-swap3:amd64 (3.1.0-1build1) ... 567s Setting up plymouth (24.004.60-1ubuntu6) ... 567s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 567s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 576s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 576s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 576s Setting up fontconfig-config (2.15.0-1.1ubuntu1) ... 576s Setting up libxmlb2:amd64 (0.3.15-1build1) ... 576s Setting up btrfs-progs (6.6.3-1.1build1) ... 576s Setting up libpython3.11-stdlib:amd64 (3.11.8-1build4) ... 576s Setting up python3.12 (3.12.2-4build3) ... 577s Setting up libblockdev-loop3:amd64 (3.1.0-1build1) ... 577s Setting up gpgsm (2.4.4-2ubuntu15) ... 577s Setting up inetutils-telnet (2:2.5-3ubuntu3) ... 577s Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu2) ... 577s update-initramfs: deferring update (trigger activated) 578s e2scrub_all.service is a disabled or a static unit not running, not starting it. 578s Setting up libparted2t64:amd64 (3.6-3.1build2) ... 578s Setting up linux-headers-generic (6.8.0-20.20+1) ... 578s Setting up dbus-daemon (1.14.10-4ubuntu2) ... 578s Setting up libmbim-proxy (1.31.2-0ubuntu2) ... 578s Setting up vim-tiny (2:9.1.0016-1ubuntu6) ... 578s Setting up libnetplan1:amd64 (1.0-1) ... 578s Setting up man-db (2.12.0-3build4) ... 578s Updating database of manual pages ... 580s man-db.service is a disabled or a static unit not running, not starting it. 580s Setting up libblockdev3:amd64 (3.1.0-1build1) ... 580s Setting up fdisk (2.39.3-9ubuntu2) ... 580s Setting up multipath-tools (0.9.4-5ubuntu6) ... 581s Setting up libjson-glib-1.0-0:amd64 (1.8.0-2build1) ... 581s Setting up libblockdev-part3:amd64 (3.1.0-1build1) ... 581s Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-5ubuntu1) ... 581s Setting up hwdata (0.379-1) ... 581s Setting up libftdi1-2:amd64 (1.5-6build4) ... 581s Setting up perl (5.38.2-3.2) ... 581s Setting up plymouth-theme-ubuntu-text (24.004.60-1ubuntu6) ... 581s update-initramfs: deferring update (trigger activated) 581s Setting up libfreetype6:amd64 (2.13.2+dfsg-1build2) ... 581s Setting up gir1.2-girepository-2.0:amd64 (1.79.1-1ubuntu6) ... 581s Setting up dbus (1.14.10-4ubuntu2) ... 581s A reboot is required to replace the running dbus-daemon. 581s Please reboot the system when convenient. 581s Setting up shared-mime-info (2.4-1build1) ... 582s Setting up libgssapi-krb5-2:amd64 (1.20.1-6ubuntu1) ... 582s Setting up libtss2-esys-3.0.2-0t64:amd64 (4.0.1-7.1ubuntu4) ... 582s Setting up ftp (20230507-2build1) ... 582s Setting up keyboxd (2.4.4-2ubuntu15) ... 582s Setting up libdpkg-perl (1.22.6ubuntu5) ... 582s Setting up libsasl2-2:amd64 (2.1.28+dfsg1-5ubuntu1) ... 582s Setting up libssh-4:amd64 (0.10.6-2build1) ... 582s Setting up ieee-data (20220827.1) ... 582s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu1) ... 582s Setting up libpam-systemd:amd64 (255.4-1ubuntu5) ... 582s Setting up libpolkit-agent-1-0:amd64 (124-1ubuntu1) ... 582s Setting up libc6-dev:amd64 (2.39-0ubuntu6) ... 582s Setting up libgpgme11t64:amd64 (1.18.0-4.1ubuntu3) ... 582s Setting up libfontconfig1:amd64 (2.15.0-1.1ubuntu1) ... 582s Setting up linux-image-virtual (6.8.0-20.20+1) ... 582s Setting up netplan-generator (1.0-1) ... 582s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 582s Setting up initramfs-tools-core (0.142ubuntu23) ... 582s Setting up libclang-cpp18 (1:18.1.2-1ubuntu2) ... 582s Setting up libbpfcc:amd64 (0.29.1+ds-1ubuntu4) ... 582s Setting up linux-tools-common (6.8.0-20.20) ... 582s Setting up libarchive13t64:amd64 (3.7.2-1.1ubuntu2) ... 582s Setting up libldap2:amd64 (2.6.7+dfsg-1~exp1ubuntu6) ... 582s Setting up libpython3-stdlib:amd64 (3.12.2-0ubuntu1) ... 582s Setting up systemd-resolved (255.4-1ubuntu5) ... 582s Setting up python3.11 (3.11.8-1build4) ... 583s Setting up linux-image-generic (6.8.0-20.20+1) ... 583s Setting up telnet (0.17+2.5-3ubuntu3) ... 583s Setting up initramfs-tools (0.142ubuntu23) ... 583s update-initramfs: deferring update (trigger activated) 583s Setting up linux-headers-virtual (6.8.0-20.20+1) ... 583s Setting up linux-generic (6.8.0-20.20+1) ... 583s Setting up libcurl4t64:amd64 (8.5.0-2ubuntu8) ... 583s Setting up bpftrace (0.20.2-1ubuntu1) ... 583s Setting up bind9-libs:amd64 (1:9.18.24-0ubuntu3) ... 583s Setting up libtirpc3t64:amd64 (1.3.4+ds-1.1) ... 583s Setting up e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu2) ... 583s Setting up iproute2 (6.1.0-1ubuntu5) ... 584s Setting up openssh-client (1:9.6p1-3ubuntu11) ... 584s Setting up libgusb2:amd64 (0.4.8-1build1) ... 584s Setting up libcurl3t64-gnutls:amd64 (8.5.0-2ubuntu8) ... 584s Setting up parted (3.6-3.1build2) ... 584s Setting up libqmi-glib5:amd64 (1.35.2-0ubuntu1) ... 584s Setting up linux-tools-6.8.0-20 (6.8.0-20.20) ... 584s Setting up python3 (3.12.2-0ubuntu1) ... 584s Setting up libjcat1:amd64 (0.2.0-2build2) ... 584s Setting up dpkg-dev (1.22.6ubuntu5) ... 584s Setting up linux-virtual (6.8.0-20.20+1) ... 584s Setting up dirmngr (2.4.4-2ubuntu15) ... 584s Setting up dbus-user-session (1.14.10-4ubuntu2) ... 584s Setting up linux-tools-6.8.0-20-generic (6.8.0-20.20) ... 584s Setting up python3-cryptography (41.0.7-4build2) ... 584s Setting up python3-gi (3.47.0-3build1) ... 584s Setting up libgd3:amd64 (2.3.3-9ubuntu3) ... 584s Setting up python3-typing-extensions (4.10.0-1) ... 585s Setting up lsof (4.95.0-1build2) ... 585s Setting up python3-pyrsistent:amd64 (0.20.0-1build1) ... 585s Setting up python3-netaddr (0.8.0-2ubuntu1) ... 585s Setting up libnsl2:amd64 (1.3.0-3build2) ... 585s Setting up gnupg (2.4.4-2ubuntu15) ... 585s Setting up python3-netplan (1.0-1) ... 585s Setting up curl (8.5.0-2ubuntu8) ... 585s Setting up libvolume-key1:amd64 (0.3.12-7build1) ... 585s Setting up bind9-host (1:9.18.24-0ubuntu3) ... 585s Setting up python3-lib2to3 (3.12.2-3ubuntu1.1) ... 585s Setting up python3-bpfcc (0.29.1+ds-1ubuntu4) ... 585s Setting up libc-devtools (2.39-0ubuntu6) ... 585s Setting up python3-pkg-resources (68.1.2-2ubuntu1) ... 585s Setting up python3-distutils (3.12.2-3ubuntu1.1) ... 586s python3.12: can't get files for byte-compilation 586s Setting up openssh-sftp-server (1:9.6p1-3ubuntu11) ... 586s Setting up python3-dbus (1.3.2-5build2) ... 586s Setting up python3-setuptools (68.1.2-2ubuntu1) ... 586s Setting up gpg-wks-client (2.4.4-2ubuntu15) ... 586s Setting up openssh-server (1:9.6p1-3ubuntu11) ... 586s Replacing config file /etc/ssh/sshd_config with new version 588s Created symlink /etc/systemd/system/ssh.service.requires/ssh.socket → /usr/lib/systemd/system/ssh.socket. 589s Setting up libblockdev-crypto3:amd64 (3.1.0-1build1) ... 589s Setting up python3-gdbm:amd64 (3.12.2-3ubuntu1.1) ... 589s Setting up python3-apt (2.7.7) ... 590s Setting up libfwupd2:amd64 (1.9.15-2) ... 590s Setting up python3-yaml (6.0.1-2build1) ... 590s Setting up libqmi-proxy (1.35.2-0ubuntu1) ... 590s Setting up netplan.io (1.0-1) ... 590s Setting up grub-common (2.12-1ubuntu5) ... 590s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 590s Setting up bpfcc-tools (0.29.1+ds-1ubuntu4) ... 590s Setting up bind9-dnsutils (1:9.18.24-0ubuntu3) ... 590s Setting up ubuntu-pro-client (31.2.2) ... 592s Setting up fwupd (1.9.15-2) ... 592s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 592s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 593s Setting up ubuntu-pro-client-l10n (31.2.2) ... 593s Setting up udisks2 (2.10.1-6) ... 593s Setting up grub2-common (2.12-1ubuntu5) ... 593s Setting up grub-pc-bin (2.12-1ubuntu5) ... 593s Setting up grub-pc (2.12-1ubuntu5) ... 593s Installing for i386-pc platform. 594s Installation finished. No error reported. 594s Sourcing file `/etc/default/grub' 594s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 594s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 594s Generating grub configuration file ... 594s Found linux image: /boot/vmlinuz-6.8.0-20-generic 594s Found linux image: /boot/vmlinuz-6.8.0-11-generic 594s Found initrd image: /boot/initrd.img-6.8.0-11-generic 594s Warning: os-prober will not be executed to detect other bootable partitions. 594s Systems on them will not be added to the GRUB boot configuration. 594s Check GRUB_DISABLE_OS_PROBER documentation entry. 594s Adding boot menu entry for UEFI Firmware Settings ... 594s done 594s Processing triggers for install-info (7.1-3build1) ... 595s Processing triggers for libc-bin (2.39-0ubuntu6) ... 595s Processing triggers for ufw (0.36.2-5) ... 595s Processing triggers for systemd (255.4-1ubuntu5) ... 595s Processing triggers for debianutils (5.17) ... 595s Processing triggers for linux-image-6.8.0-20-generic (6.8.0-20.20) ... 595s /etc/kernel/postinst.d/initramfs-tools: 595s update-initramfs: Generating /boot/initrd.img-6.8.0-20-generic 595s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 602s /etc/kernel/postinst.d/zz-update-grub: 602s Sourcing file `/etc/default/grub' 602s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 602s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 602s Generating grub configuration file ... 602s Found linux image: /boot/vmlinuz-6.8.0-20-generic 602s Found initrd image: /boot/initrd.img-6.8.0-20-generic 603s Found linux image: /boot/vmlinuz-6.8.0-11-generic 603s Found initrd image: /boot/initrd.img-6.8.0-11-generic 603s Warning: os-prober will not be executed to detect other bootable partitions. 603s Systems on them will not be added to the GRUB boot configuration. 603s Check GRUB_DISABLE_OS_PROBER documentation entry. 603s Adding boot menu entry for UEFI Firmware Settings ... 603s done 603s Processing triggers for initramfs-tools (0.142ubuntu23) ... 603s update-initramfs: Generating /boot/initrd.img-6.8.0-20-generic 603s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 613s Reading package lists... 613s Building dependency tree... 613s Reading state information... 613s The following packages will be REMOVED: 613s libaio1* libnetplan0* python3-distutils* python3-lib2to3* 613s 0 upgraded, 0 newly installed, 4 to remove and 0 not upgraded. 613s After this operation, 1420 kB disk space will be freed. 613s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 115148 files and directories currently installed.) 613s Removing libaio1:amd64 (0.3.113-5) ... 613s Removing libnetplan0:amd64 (0.107.1-3) ... 613s Removing python3-distutils (3.12.2-3ubuntu1.1) ... 614s Removing python3-lib2to3 (3.12.2-3ubuntu1.1) ... 614s Processing triggers for libc-bin (2.39-0ubuntu6) ... 614s autopkgtest [11:35:55]: rebooting testbed after setup commands that affected boot 757s autopkgtest [11:38:18]: testbed running kernel: Linux 6.8.0-20-generic #20-Ubuntu SMP PREEMPT_DYNAMIC Mon Mar 18 11:23:20 UTC 2024 758s autopkgtest [11:38:19]: @@@@@@@@@@@@@@@@@@@@ apt-source bbmap 760s Get:1 http://ftpmaster.internal/ubuntu noble/universe bbmap 39.06+dfsg-1 (dsc) [2286 B] 760s Get:2 http://ftpmaster.internal/ubuntu noble/universe bbmap 39.06+dfsg-1 (tar) [5343 kB] 760s Get:3 http://ftpmaster.internal/ubuntu noble/universe bbmap 39.06+dfsg-1 (diff) [25.4 kB] 760s gpgv: Signature made Fri Nov 24 11:00:29 2023 UTC 760s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 760s gpgv: issuer "emollier@debian.org" 760s gpgv: Can't check signature: No public key 760s dpkg-source: warning: cannot verify inline signature for ./bbmap_39.06+dfsg-1.dsc: no acceptable signature found 760s autopkgtest [11:38:21]: testing package bbmap version 39.06+dfsg-1 760s autopkgtest [11:38:21]: build not needed 761s autopkgtest [11:38:22]: test run-unit-test: preparing testbed 762s Reading package lists... 763s Building dependency tree... 763s Reading state information... 763s Starting pkgProblemResolver with broken count: 0 763s Starting 2 pkgProblemResolver with broken count: 0 763s Done 764s The following additional packages will be installed: 764s bbmap bbmap-jni ca-certificates-java java-common libapache-pom-java 764s libcommons-cli-java libcommons-codec-java libcommons-io-java 764s libcommons-parent-java liblcms2-2 liblog4j1.2-java libmpj-java libpcsclite1 764s openjdk-17-jre-headless python-biopython-doc 764s Suggested packages: 764s default-jre libcommons-io-java-doc liblcms2-utils liblog4j1.2-java-doc 764s libmail-java pcscd libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic 764s fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic 764s Recommended packages: 764s pigz libcups2t64 libharfbuzz0b libasound2t64 python3-biopython 764s The following NEW packages will be installed: 764s autopkgtest-satdep bbmap bbmap-jni ca-certificates-java java-common 764s libapache-pom-java libcommons-cli-java libcommons-codec-java 764s libcommons-io-java libcommons-parent-java liblcms2-2 liblog4j1.2-java 764s libmpj-java libpcsclite1 openjdk-17-jre-headless python-biopython-doc 764s 0 upgraded, 16 newly installed, 0 to remove and 0 not upgraded. 764s Need to get 76.8 MB/76.8 MB of archives. 764s After this operation, 227 MB of additional disk space will be used. 764s Get:1 /tmp/autopkgtest.ftYQDq/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [720 B] 764s Get:2 http://ftpmaster.internal/ubuntu noble/universe amd64 libcommons-cli-java all 1.6.0-1 [59.9 kB] 764s Get:3 http://ftpmaster.internal/ubuntu noble/universe amd64 libapache-pom-java all 29-2 [5284 B] 764s Get:4 http://ftpmaster.internal/ubuntu noble/universe amd64 libcommons-parent-java all 56-1 [10.7 kB] 764s Get:5 http://ftpmaster.internal/ubuntu noble/universe amd64 libcommons-codec-java all 1.16.0-1 [306 kB] 764s Get:6 http://ftpmaster.internal/ubuntu noble/universe amd64 libcommons-io-java all 2.11.0-2 [297 kB] 764s Get:7 http://ftpmaster.internal/ubuntu noble/universe amd64 liblog4j1.2-java all 1.2.17-11 [439 kB] 764s Get:8 http://ftpmaster.internal/ubuntu noble/universe amd64 libmpj-java all 0.44+dfsg-4 [443 kB] 764s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 ca-certificates-java all 20240118 [11.6 kB] 764s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 java-common all 0.75+exp1 [6798 B] 764s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 liblcms2-2 amd64 2.14-2 [161 kB] 764s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpcsclite1 amd64 2.0.3-1 [21.4 kB] 764s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 openjdk-17-jre-headless amd64 17.0.11~7ea-1 [47.9 MB] 764s Get:14 http://ftpmaster.internal/ubuntu noble/universe amd64 bbmap all 39.06+dfsg-1 [9768 kB] 764s Get:15 http://ftpmaster.internal/ubuntu noble/universe amd64 bbmap-jni amd64 39.06+dfsg-1 [28.4 kB] 764s Get:16 http://ftpmaster.internal/ubuntu noble/universe amd64 python-biopython-doc all 1.81+dfsg-3 [17.3 MB] 765s Fetched 76.8 MB in 1s (94.7 MB/s) 765s Selecting previously unselected package libcommons-cli-java. 765s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 114924 files and directories currently installed.) 765s Preparing to unpack .../00-libcommons-cli-java_1.6.0-1_all.deb ... 765s Unpacking libcommons-cli-java (1.6.0-1) ... 765s Selecting previously unselected package libapache-pom-java. 765s Preparing to unpack .../01-libapache-pom-java_29-2_all.deb ... 765s Unpacking libapache-pom-java (29-2) ... 765s Selecting previously unselected package libcommons-parent-java. 765s Preparing to unpack .../02-libcommons-parent-java_56-1_all.deb ... 765s Unpacking libcommons-parent-java (56-1) ... 765s Selecting previously unselected package libcommons-codec-java. 765s Preparing to unpack .../03-libcommons-codec-java_1.16.0-1_all.deb ... 765s Unpacking libcommons-codec-java (1.16.0-1) ... 765s Selecting previously unselected package libcommons-io-java. 765s Preparing to unpack .../04-libcommons-io-java_2.11.0-2_all.deb ... 765s Unpacking libcommons-io-java (2.11.0-2) ... 765s Selecting previously unselected package liblog4j1.2-java. 765s Preparing to unpack .../05-liblog4j1.2-java_1.2.17-11_all.deb ... 765s Unpacking liblog4j1.2-java (1.2.17-11) ... 765s Selecting previously unselected package libmpj-java. 765s Preparing to unpack .../06-libmpj-java_0.44+dfsg-4_all.deb ... 765s Unpacking libmpj-java (0.44+dfsg-4) ... 765s Selecting previously unselected package ca-certificates-java. 765s Preparing to unpack .../07-ca-certificates-java_20240118_all.deb ... 765s Unpacking ca-certificates-java (20240118) ... 765s Selecting previously unselected package java-common. 765s Preparing to unpack .../08-java-common_0.75+exp1_all.deb ... 765s Unpacking java-common (0.75+exp1) ... 765s Selecting previously unselected package liblcms2-2:amd64. 765s Preparing to unpack .../09-liblcms2-2_2.14-2_amd64.deb ... 765s Unpacking liblcms2-2:amd64 (2.14-2) ... 765s Selecting previously unselected package libpcsclite1:amd64. 765s Preparing to unpack .../10-libpcsclite1_2.0.3-1_amd64.deb ... 765s Unpacking libpcsclite1:amd64 (2.0.3-1) ... 766s Selecting previously unselected package openjdk-17-jre-headless:amd64. 766s Preparing to unpack .../11-openjdk-17-jre-headless_17.0.11~7ea-1_amd64.deb ... 766s Unpacking openjdk-17-jre-headless:amd64 (17.0.11~7ea-1) ... 766s Selecting previously unselected package bbmap. 766s Preparing to unpack .../12-bbmap_39.06+dfsg-1_all.deb ... 766s Unpacking bbmap (39.06+dfsg-1) ... 767s Selecting previously unselected package bbmap-jni. 767s Preparing to unpack .../13-bbmap-jni_39.06+dfsg-1_amd64.deb ... 767s Unpacking bbmap-jni (39.06+dfsg-1) ... 767s Selecting previously unselected package python-biopython-doc. 767s Preparing to unpack .../14-python-biopython-doc_1.81+dfsg-3_all.deb ... 767s Unpacking python-biopython-doc (1.81+dfsg-3) ... 767s Selecting previously unselected package autopkgtest-satdep. 767s Preparing to unpack .../15-1-autopkgtest-satdep.deb ... 767s Unpacking autopkgtest-satdep (0) ... 767s Setting up liblcms2-2:amd64 (2.14-2) ... 767s Setting up java-common (0.75+exp1) ... 767s Setting up libcommons-cli-java (1.6.0-1) ... 767s Setting up liblog4j1.2-java (1.2.17-11) ... 767s Setting up libapache-pom-java (29-2) ... 767s Setting up libpcsclite1:amd64 (2.0.3-1) ... 767s Setting up python-biopython-doc (1.81+dfsg-3) ... 767s Setting up bbmap-jni (39.06+dfsg-1) ... 767s Setting up ca-certificates-java (20240118) ... 767s No JRE found. Skipping Java certificates setup. 767s Setting up libcommons-parent-java (56-1) ... 767s Setting up openjdk-17-jre-headless:amd64 (17.0.11~7ea-1) ... 767s update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode 767s update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 767s update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 767s update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 767s update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 767s Setting up libcommons-codec-java (1.16.0-1) ... 767s Setting up libcommons-io-java (2.11.0-2) ... 767s Setting up libmpj-java (0.44+dfsg-4) ... 767s Processing triggers for libc-bin (2.39-0ubuntu6) ... 767s Processing triggers for man-db (2.12.0-3build4) ... 768s Processing triggers for ca-certificates-java (20240118) ... 768s Adding debian:ACCVRAIZ1.pem 768s Adding debian:AC_RAIZ_FNMT-RCM.pem 769s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 769s Adding debian:ANF_Secure_Server_Root_CA.pem 769s Adding debian:Actalis_Authentication_Root_CA.pem 769s Adding debian:AffirmTrust_Commercial.pem 769s Adding debian:AffirmTrust_Networking.pem 769s Adding debian:AffirmTrust_Premium.pem 769s Adding debian:AffirmTrust_Premium_ECC.pem 769s Adding debian:Amazon_Root_CA_1.pem 769s Adding debian:Amazon_Root_CA_2.pem 769s Adding debian:Amazon_Root_CA_3.pem 769s Adding debian:Amazon_Root_CA_4.pem 769s Adding debian:Atos_TrustedRoot_2011.pem 769s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 769s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 769s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 769s Adding debian:BJCA_Global_Root_CA1.pem 769s Adding debian:BJCA_Global_Root_CA2.pem 769s Adding debian:Baltimore_CyberTrust_Root.pem 769s Adding debian:Buypass_Class_2_Root_CA.pem 769s Adding debian:Buypass_Class_3_Root_CA.pem 769s Adding debian:CA_Disig_Root_R2.pem 769s Adding debian:CFCA_EV_ROOT.pem 769s Adding debian:COMODO_Certification_Authority.pem 769s Adding debian:COMODO_ECC_Certification_Authority.pem 769s Adding debian:COMODO_RSA_Certification_Authority.pem 769s Adding debian:Certainly_Root_E1.pem 769s Adding debian:Certainly_Root_R1.pem 769s Adding debian:Certigna.pem 769s Adding debian:Certigna_Root_CA.pem 769s Adding debian:Certum_EC-384_CA.pem 769s Adding debian:Certum_Trusted_Network_CA.pem 769s Adding debian:Certum_Trusted_Network_CA_2.pem 769s Adding debian:Certum_Trusted_Root_CA.pem 769s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 769s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 769s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 769s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 769s Adding debian:Comodo_AAA_Services_root.pem 769s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 769s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 769s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 769s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 769s Adding debian:DigiCert_Assured_ID_Root_CA.pem 769s Adding debian:DigiCert_Assured_ID_Root_G2.pem 769s Adding debian:DigiCert_Assured_ID_Root_G3.pem 769s Adding debian:DigiCert_Global_Root_CA.pem 769s Adding debian:DigiCert_Global_Root_G2.pem 769s Adding debian:DigiCert_Global_Root_G3.pem 769s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 769s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 769s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 769s Adding debian:DigiCert_Trusted_Root_G4.pem 769s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 769s Adding debian:Entrust_Root_Certification_Authority.pem 769s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 769s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 769s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 769s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 769s Adding debian:GLOBALTRUST_2020.pem 769s Adding debian:GTS_Root_R1.pem 769s Adding debian:GTS_Root_R2.pem 769s Adding debian:GTS_Root_R3.pem 769s Adding debian:GTS_Root_R4.pem 769s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 769s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 769s Adding debian:GlobalSign_Root_CA.pem 769s Adding debian:GlobalSign_Root_CA_-_R3.pem 769s Adding debian:GlobalSign_Root_CA_-_R6.pem 769s Adding debian:GlobalSign_Root_E46.pem 769s Adding debian:GlobalSign_Root_R46.pem 769s Adding debian:Go_Daddy_Class_2_CA.pem 769s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 769s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 769s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 769s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 769s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 769s Adding debian:HiPKI_Root_CA_-_G1.pem 769s Adding debian:Hongkong_Post_Root_CA_3.pem 769s Adding debian:ISRG_Root_X1.pem 769s Adding debian:ISRG_Root_X2.pem 769s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 769s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 769s Adding debian:Izenpe.com.pem 769s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 769s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 769s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 769s Adding debian:NAVER_Global_Root_Certification_Authority.pem 769s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 769s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 769s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 769s Adding debian:QuoVadis_Root_CA_1_G3.pem 769s Adding debian:QuoVadis_Root_CA_2.pem 769s Adding debian:QuoVadis_Root_CA_2_G3.pem 769s Adding debian:QuoVadis_Root_CA_3.pem 769s Adding debian:QuoVadis_Root_CA_3_G3.pem 769s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 769s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 769s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 769s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 769s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 769s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 769s Adding debian:SZAFIR_ROOT_CA2.pem 769s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 769s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 769s Adding debian:SecureSign_RootCA11.pem 769s Adding debian:SecureTrust_CA.pem 769s Adding debian:Secure_Global_CA.pem 769s Adding debian:Security_Communication_ECC_RootCA1.pem 769s Adding debian:Security_Communication_RootCA2.pem 769s Adding debian:Security_Communication_RootCA3.pem 769s Adding debian:Security_Communication_Root_CA.pem 769s Adding debian:Starfield_Class_2_CA.pem 769s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 769s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 769s Adding debian:SwissSign_Gold_CA_-_G2.pem 769s Adding debian:SwissSign_Silver_CA_-_G2.pem 769s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 769s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 769s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 769s Adding debian:TWCA_Global_Root_CA.pem 769s Adding debian:TWCA_Root_Certification_Authority.pem 769s Adding debian:TeliaSonera_Root_CA_v1.pem 769s Adding debian:Telia_Root_CA_v2.pem 769s Adding debian:TrustAsia_Global_Root_CA_G3.pem 769s Adding debian:TrustAsia_Global_Root_CA_G4.pem 769s Adding debian:Trustwave_Global_Certification_Authority.pem 769s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 769s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 769s Adding debian:TunTrust_Root_CA.pem 769s Adding debian:UCA_Extended_Validation_Root.pem 769s Adding debian:UCA_Global_G2_Root.pem 769s Adding debian:USERTrust_ECC_Certification_Authority.pem 769s Adding debian:USERTrust_RSA_Certification_Authority.pem 769s Adding debian:XRamp_Global_CA_Root.pem 769s Adding debian:certSIGN_ROOT_CA.pem 769s Adding debian:certSIGN_Root_CA_G2.pem 769s Adding debian:e-Szigno_Root_CA_2017.pem 769s Adding debian:ePKI_Root_Certification_Authority.pem 769s Adding debian:emSign_ECC_Root_CA_-_C3.pem 769s Adding debian:emSign_ECC_Root_CA_-_G3.pem 769s Adding debian:emSign_Root_CA_-_C1.pem 769s Adding debian:emSign_Root_CA_-_G1.pem 769s Adding debian:vTrus_ECC_Root_CA.pem 769s Adding debian:vTrus_Root_CA.pem 769s done. 769s Setting up bbmap (39.06+dfsg-1) ... 769s Setting up autopkgtest-satdep (0) ... 772s (Reading database ... 117500 files and directories currently installed.) 772s Removing autopkgtest-satdep (0) ... 772s autopkgtest [11:38:33]: test run-unit-test: [----------------------- 772s 772s # bbmap 772s bbmap.sh --version 772s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 772s java -ea -Xmx2786m -Xms2786m -cp /usr/share/java/bbmap.jar align2.BBMap build=1 overwrite=true fastareadlen=500 --version 772s BBMap version 39.06 772s For help, please run the shellscript with no parameters, or look in /docs/. 772s bbmap.sh --help 772s 772s BBMap 772s Written by Brian Bushnell, from Dec. 2010 - present 772s Last modified September 15, 2022 772s 772s Description: Fast and accurate splice-aware read aligner. 772s Please read bbmap/docs/guides/BBMapGuide.txt for more information. 772s 772s To index: bbmap.sh ref= 772s To map: bbmap.sh in= out= 772s To map without writing an index: 772s bbmap.sh ref= in= out= nodisk 772s 772s in=stdin will accept reads from standard in, and out=stdout will write to 772s standard out, but file extensions are still needed to specify the format of the 772s input and output files e.g. in=stdin.fa.gz will read gzipped fasta from 772s standard in; out=stdout.sam.gz will write gzipped sam. 772s 772s Indexing Parameters (required when building the index): 772s nodisk=f Set to true to build index in memory and write nothing 772s to disk except output. 772s ref= Specify the reference sequence. Only do this ONCE, 772s when building the index (unless using 'nodisk'). 772s build=1 If multiple references are indexed in the same directory, 772s each needs a unique numeric ID (unless using 'nodisk'). 772s k=13 Kmer length, range 8-15. Longer is faster but uses 772s more memory. Shorter is more sensitive. 772s If indexing and mapping are done in two steps, K should 772s be specified each time. 772s path=<.> Specify the location to write the index, if you don't 772s want it in the current working directory. 772s usemodulo=f Throw away ~80% of kmers based on remainder modulo a 772s number (reduces RAM by 50% and sensitivity slightly). 772s Should be enabled both when building the index AND 772s when mapping. 772s rebuild=f Force a rebuild of the index (ref= should be set). 772s 772s Input Parameters: 772s build=1 Designate index to use. Corresponds to the number 772s specified when building the index. 772s in= Primary reads input; required parameter. 772s in2= For paired reads in two files. 772s interleaved=auto True forces paired/interleaved input; false forces 772s single-ended mapping. If not specified, interleaved 772s status will be autodetected from read names. 772s fastareadlen=500 Break up FASTA reads longer than this. Max is 500 for 772s BBMap and 6000 for BBMapPacBio. Only works for FASTA 772s input (use 'maxlen' for FASTQ input). The default for 772s bbmap.sh is 500, and for mapPacBio.sh is 6000. 772s unpigz=f Spawn a pigz (parallel gzip) process for faster 772s decompression than using Java. 772s Requires pigz to be installed. 772s touppercase=t (tuc) Convert lowercase letters in reads to upper case 772s (otherwise they will not match the reference). 772s 772s Sampling Parameters: 772s 772s reads=-1 Set to a positive number N to only process the first N 772s reads (or pairs), then quit. -1 means use all reads. 772s samplerate=1 Set to a number from 0 to 1 to randomly select that 772s fraction of reads for mapping. 1 uses all reads. 772s skipreads=0 Set to a number N to skip the first N reads (or pairs), 772s then map the rest. 772s 772s Mapping Parameters: 772s fast=f This flag is a macro which sets other paramters to run 772s faster, at reduced sensitivity. Bad for RNA-seq. 772s slow=f This flag is a macro which sets other paramters to run 772s slower, at greater sensitivity. 'vslow' is even slower. 772s maxindel=16000 Don't look for indels longer than this. Lower is faster. 772s Set to >=100k for RNAseq with long introns like mammals. 772s strictmaxindel=f When enabled, do not allow indels longer than 'maxindel'. 772s By default these are not sought, but may be found anyway. 772s tipsearch=100 Look this far for read-end deletions with anchors 772s shorter than K, using brute force. 772s minid=0.76 Approximate minimum alignment identity to look for. 772s Higher is faster and less sensitive. 772s minhits=1 Minimum number of seed hits required for candidate sites. 772s Higher is faster. 772s local=f Set to true to use local, rather than global, alignments. 772s This will soft-clip ugly ends of poor alignments. 772s perfectmode=f Allow only perfect mappings when set to true (very fast). 772s semiperfectmode=f Allow only perfect and semiperfect (perfect except for 772s N's in the reference) mappings. 772s threads=auto (t) Set to number of threads desired. By default, uses 772s all cores available. 772s ambiguous=best (ambig) Set behavior on ambiguously-mapped reads (with 772s multiple top-scoring mapping locations). 772s best (use the first best site) 772s toss (consider unmapped) 772s random (select one top-scoring site randomly) 772s all (retain all top-scoring sites) 772s samestrandpairs=f (ssp) Specify whether paired reads should map to the 772s same strand or opposite strands. 772s requirecorrectstrand=t (rcs) Forbid pairing of reads without correct strand 772s orientation. Set to false for long-mate-pair libraries. 772s killbadpairs=f (kbp) If a read pair is mapped with an inappropriate 772s insert size or orientation, the read with the lower 772s mapping quality is marked unmapped. 772s pairedonly=f (po) Treat unpaired reads as unmapped. Thus they will 772s be sent to 'outu' but not 'outm'. 772s rcomp=f Reverse complement both reads prior to mapping (for LMP 772s outward-facing libraries). 772s rcompmate=f Reverse complement read2 prior to mapping. 772s pairlen=32000 Set max allowed distance between paired reads. 772s (insert size)=(pairlen)+(read1 length)+(read2 length) 772s rescuedist=1200 Don't try to rescue paired reads if avg. insert size 772s greater than this. Lower is faster. 772s rescuemismatches=32 Maximum mismatches allowed in a rescued read. Lower 772s is faster. 772s averagepairdist=100 (apd) Initial average distance between paired reads. 772s Varies dynamically; does not need to be specified. 772s deterministic=f Run in deterministic mode. In this case it is good 772s to set averagepairdist. BBMap is deterministic 772s without this flag if using single-ended reads, 772s or run singlethreaded. 772s bandwidthratio=0 (bwr) If above zero, restrict alignment band to this 772s fraction of read length. Faster but less accurate. 772s bandwidth=0 (bw) Set the bandwidth directly. 772s fraction of read length. Faster but less accurate. 772s usejni=f (jni) Do alignments faster, in C code. Requires 772s compiling the C code; details are in /jni/README.txt. 772s maxsites2=800 Don't analyze (or print) more than this many alignments 772s per read. 772s ignorefrequentkmers=t (ifk) Discard low-information kmers that occur often. 772s excludefraction=0.03 (ef) Fraction of kmers to ignore. For example, 0.03 772s will ignore the most common 3% of kmers. 772s greedy=t Use a greedy algorithm to discard the least-useful 772s kmers on a per-read basis. 772s kfilter=0 If positive, potential mapping sites must have at 772s least this many consecutive exact matches. 772s 772s 772s Quality and Trimming Parameters: 772s qin=auto Set to 33 or 64 to specify input quality value ASCII 772s offset. 33 is Sanger, 64 is old Solexa. 772s qout=auto Set to 33 or 64 to specify output quality value ASCII 772s offset (only if output format is fastq). 772s qtrim=f Quality-trim ends before mapping. Options are: 772s 'f' (false), 'l' (left), 'r' (right), and 'lr' (both). 772s untrim=f Undo trimming after mapping. Untrimmed bases will be 772s soft-clipped in cigar strings. 772s trimq=6 Trim regions with average quality below this 772s (phred algorithm). 772s mintrimlength=60 (mintl) Don't trim reads to be shorter than this. 772s fakefastaquality=-1 (ffq) Set to a positive number 1-50 to generate fake 772s quality strings for fasta input reads. 772s ignorebadquality=f (ibq) Keep going, rather than crashing, if a read has 772s out-of-range quality values. 772s usequality=t Use quality scores when determining which read kmers 772s to use as seeds. 772s minaveragequality=0 (maq) Do not map reads with average quality below this. 772s maqb=0 If positive, calculate maq from this many initial bases. 772s 772s Output Parameters: 772s out= Write all reads to this file. 772s outu= Write only unmapped reads to this file. Does not 772s include unmapped paired reads with a mapped mate. 772s outm= Write only mapped reads to this file. Includes 772s unmapped paired reads with a mapped mate. 772s mappedonly=f If true, treats 'out' like 'outm'. 772s bamscript= (bs) Write a shell script to that will turn 772s the sam output into a sorted, indexed bam file. 772s ordered=f Set to true to output reads in same order as input. 772s Slower and uses more memory. 772s overwrite=f (ow) Allow process to overwrite existing files. 772s secondary=f Print secondary alignments. 772s sssr=0.95 (secondarysitescoreratio) Print only secondary alignments 772s with score of at least this fraction of primary. 772s ssao=f (secondarysiteasambiguousonly) Only print secondary 772s alignments for ambiguously-mapped reads. 772s maxsites=5 Maximum number of total alignments to print per read. 772s Only relevant when secondary=t. 772s quickmatch=f Generate cigar strings more quickly. 772s trimreaddescriptions=f (trd) Truncate read and ref names at the first whitespace, 772s assuming that the remainder is a comment or description. 772s ziplevel=2 (zl) Compression level for zip or gzip output. 772s pigz=f Spawn a pigz (parallel gzip) process for faster 772s compression than Java. Requires pigz to be installed. 772s machineout=f Set to true to output statistics in machine-friendly 772s 'key=value' format. 772s printunmappedcount=f Print the total number of unmapped reads and bases. 772s If input is paired, the number will be of pairs 772s for which both reads are unmapped. 772s showprogress=0 If positive, print a '.' every X reads. 772s showprogress2=0 If positive, print the number of seconds since the 772s last progress update (instead of a '.'). 772s renamebyinsert=f Renames reads based on their mapped insert size. 772s 772s Bloom-Filtering Parameters (bloomfilter.sh is the standalone version). 772s bloom=f Use a Bloom filter to ignore reads not sharing kmers 772s with the reference. This uses more memory, but speeds 772s mapping when most reads don't match the reference. 772s bloomhashes=2 Number of hash functions. 772s bloomminhits=3 Number of consecutive hits to be considered matched. 772s bloomk=31 Bloom filter kmer length. 772s bloomserial=t Use the serialized Bloom filter for greater loading 772s speed, if available. If not, generate and write one. 772s 772s Post-Filtering Parameters: 772s idfilter=0 Independant of minid; sets exact minimum identity 772s allowed for alignments to be printed. Range 0 to 1. 772s subfilter=-1 Ban alignments with more than this many substitutions. 772s insfilter=-1 Ban alignments with more than this many insertions. 772s delfilter=-1 Ban alignments with more than this many deletions. 772s indelfilter=-1 Ban alignments with more than this many indels. 772s editfilter=-1 Ban alignments with more than this many edits. 772s inslenfilter=-1 Ban alignments with an insertion longer than this. 772s dellenfilter=-1 Ban alignments with a deletion longer than this. 772s nfilter=-1 Ban alignments with more than this many ns. This 772s includes nocall, noref, and off scaffold ends. 772s 772s Sam flags and settings: 772s noheader=f Disable generation of header lines. 772s sam=1.4 Set to 1.4 to write Sam version 1.4 cigar strings, 772s with = and X, or 1.3 to use M. 772s saa=t (secondaryalignmentasterisks) Use asterisks instead of 772s bases for sam secondary alignments. 772s cigar=t Set to 'f' to skip generation of cigar strings (faster). 772s keepnames=f Keep original names of paired reads, rather than 772s ensuring both reads have the same name. 772s intronlen=999999999 Set to a lower number like 10 to change 'D' to 'N' in 772s cigar strings for deletions of at least that length. 772s rgid= Set readgroup ID. All other readgroup fields 772s can be set similarly, with the flag rgXX= 772s If you set a readgroup flag to the word 'filename', 772s e.g. rgid=filename, the input file name will be used. 772s mdtag=f Write MD tags. 772s nhtag=f Write NH tags. 772s xmtag=f Write XM tags (may only work correctly with ambig=all). 772s amtag=f Write AM tags. 772s nmtag=f Write NM tags. 772s xstag=f Set to 'xs=fs', 'xs=ss', or 'xs=us' to write XS tags 772s for RNAseq using firststrand, secondstrand, or 772s unstranded libraries. Needed by Cufflinks. 772s JGI mainly uses 'firststrand'. 772s stoptag=f Write a tag indicating read stop location, prefixed by YS:i: 772s lengthtag=f Write a tag indicating (query,ref) alignment lengths, 772s prefixed by YL:Z: 772s idtag=f Write a tag indicating percent identity, prefixed by YI:f: 772s inserttag=f Write a tag indicating insert size, prefixed by X8:Z: 772s scoretag=f Write a tag indicating BBMap's raw score, prefixed by YR:i: 772s timetag=f Write a tag indicating this read's mapping time, prefixed by X0:i: 772s boundstag=f Write a tag indicating whether either read in the pair 772s goes off the end of the reference, prefixed by XB:Z: 772s notags=f Turn off all optional tags. 772s 772s Histogram and statistics output parameters: 772s scafstats= Statistics on how many reads mapped to which scaffold. 772s refstats= Statistics on how many reads mapped to which reference 772s file; only for BBSplit. 772s sortscafs=t Sort scaffolds or references by read count. 772s bhist= Base composition histogram by position. 772s qhist= Quality histogram by position. 772s aqhist= Histogram of average read quality. 772s bqhist= Quality histogram designed for box plots. 772s lhist= Read length histogram. 772s ihist= Write histogram of insert sizes (for paired reads). 772s ehist= Errors-per-read histogram. 772s qahist= Quality accuracy histogram of error rates versus 772s quality score. 772s indelhist= Indel length histogram. 772s mhist= Histogram of match, sub, del, and ins rates by 772s read location. 772s gchist= Read GC content histogram. 772s gcbins=100 Number gchist bins. Set to 'auto' to use read length. 772s gcpairs=t Use average GC of paired reads. 772s idhist= Histogram of read count versus percent identity. 772s idbins=100 Number idhist bins. Set to 'auto' to use read length. 772s statsfile=stderr Mapping statistics are printed here. 772s 772s Coverage output parameters (these may reduce speed and use more RAM): 772s covstats= Per-scaffold coverage info. 772s rpkm= Per-scaffold RPKM/FPKM counts. 772s covhist= Histogram of # occurrences of each depth level. 772s basecov= Coverage per base location. 772s bincov= Print binned coverage per location (one line per X bases). 772s covbinsize=1000 Set the binsize for binned coverage output. 772s nzo=t Only print scaffolds with nonzero coverage. 772s twocolumn=f Change to true to print only ID and Avg_fold instead of 772s all 6 columns to the 'out=' file. 772s 32bit=f Set to true if you need per-base coverage over 64k. 772s strandedcov=f Track coverage for plus and minus strand independently. 772s startcov=f Only track start positions of reads. 772s secondarycov=t Include coverage of secondary alignments. 772s physcov=f Calculate physical coverage for paired reads. 772s This includes the unsequenced bases. 772s delcoverage=t (delcov) Count bases covered by deletions as covered. 772s True is faster than false. 772s covk=0 If positive, calculate kmer coverage statistics. 772s 772s Java Parameters: 772s -Xmx This will set Java's memory usage, 772s overriding autodetection. 772s -Xmx20g will specify 20 gigs of RAM, and -Xmx800m 772s will specify 800 megs. The max is typically 85% of 772s physical memory. The human genome requires around 24g, 772s or 12g with the 'usemodulo' flag. The index uses 772s roughly 6 bytes per reference base. 772s -eoom This flag will cause the process to exit if an 772s out-of-memory exception occurs. Requires Java 8u92+. 772s -da Disable assertions. 772s 772s Please contact Brian Bushnell at bbushnell@lbl.gov if you encounter 772s any problems, or post at: http://seqanswers.com/forums/showthread.php?t=41057 772s 772s bbmap.sh ref=example.fasta 772s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 772s java -ea -Xmx2787m -Xms2787m -cp /usr/share/java/bbmap.jar align2.BBMap build=1 overwrite=true fastareadlen=500 ref=example.fasta 772s Executing align2.BBMap [build=1, overwrite=true, fastareadlen=500, ref=example.fasta] 772s Version 39.06 772s 772s No output file. 772s Writing reference. 772s Executing dna.FastaToChromArrays2 [example.fasta, 1, writeinthread=false, genscaffoldinfo=true, retain, waitforwriting=false, gz=true, maxlen=536670912, writechroms=true, minscaf=1, midpad=300, startpad=8000, stoppad=8000, nodisk=false] 772s 772s Set genScaffoldInfo=true 772s Writing chunk 1 772s Set genome to 1 773s 773s Loaded Reference: 0.005 seconds. 773s Loading index for chunk 1-1, build 1 773s No index available; generating from reference genome: /tmp/autopkgtest.ftYQDq/autopkgtest_tmp/ref/index/1/chr1_index_k13_c16_b1.block 773s Indexing threads started for block 0-1 773s Indexing threads finished for block 0-1 774s Generated Index: 1.042 seconds. 774s No reads to process; quitting. 774s 774s Total time: 1.185 seconds. 774s test -d ref 774s bbmap.sh in=misc_dna_as_sanger.fastq out=out.sam 774s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 774s java -ea -Xmx2786m -Xms2786m -cp /usr/share/java/bbmap.jar align2.BBMap build=1 overwrite=true fastareadlen=500 in=misc_dna_as_sanger.fastq out=out.sam 774s Executing align2.BBMap [build=1, overwrite=true, fastareadlen=500, in=misc_dna_as_sanger.fastq, out=out.sam] 774s Version 39.06 774s 774s Retaining first best site only for ambiguous mappings. 774s Set genome to 1 774s 774s Loaded Reference: 0.022 seconds. 774s Loading index for chunk 1-1, build 1 774s Generated Index: 0.481 seconds. 778s Analyzed Index: 3.283 seconds. 778s Started output stream: 0.021 seconds. 778s Cleared Memory: 0.119 seconds. 778s Processing reads in single-ended mode. 778s Started read stream. 778s Started 4 mapping threads. 778s Detecting finished threads: 0, 1, 2, 3 778s 778s ------------------ Results ------------------ 778s 778s Genome: 1 778s Key Length: 13 778s Max Indel: 16000 778s Minimum Score Ratio: 0.56 778s Mapping Mode: normal 778s Reads Used: 4 (153 bases) 778s 778s Mapping: 0.091 seconds. 778s Reads/sec: 44.06 778s kBases/sec: 1.69 778s 778s 778s Read 1 data: pct reads num reads pct bases num bases 778s 778s mapped: 0.0000% 0 0.0000% 0 778s unambiguous: 0.0000% 0 0.0000% 0 778s ambiguous: 0.0000% 0 0.0000% 0 778s low-Q discards: 25.0000% 1 19.6078% 30 778s 778s perfect best site: 0.0000% 0 0.0000% 0 778s semiperfect site: 0.0000% 0 0.0000% 0 778s 778s Match Rate: NA NA NaN% 0 778s Error Rate: NaN% 0 NaN% 0 778s Sub Rate: NaN% 0 NaN% 0 778s Del Rate: NaN% 0 NaN% 0 778s Ins Rate: NaN% 0 NaN% 0 778s N Rate: NaN% 0 NaN% 0 778s 778s Total time: 4.108 seconds. 778s test -r out.sam 778s bbmap.sh ref=example.fasta in=example.fastq out=out2.sam nodisk 778s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 778s java -ea -Xmx2786m -Xms2786m -cp /usr/share/java/bbmap.jar align2.BBMap build=1 overwrite=true fastareadlen=500 ref=example.fasta in=example.fastq out=out2.sam nodisk 778s Executing align2.BBMap [build=1, overwrite=true, fastareadlen=500, ref=example.fasta, in=example.fastq, out=out2.sam, nodisk] 778s Version 39.06 778s 778s Retaining first best site only for ambiguous mappings. 778s Executing dna.FastaToChromArrays2 [example.fasta, 1, writeinthread=false, genscaffoldinfo=true, retain, waitforwriting=false, gz=true, maxlen=536670912, writechroms=false, minscaf=1, midpad=300, startpad=8000, stoppad=8000, nodisk=true] 778s 778s Set genScaffoldInfo=true 778s Set genome to 1 778s 778s Loaded Reference: 0.002 seconds. 778s Loading index for chunk 1-1, build 1 778s Indexing threads started for block 0-1 778s Indexing threads finished for block 0-1 778s Generated Index: 0.273 seconds. 783s Analyzed Index: 4.152 seconds. 783s Started output stream: 0.020 seconds. 783s Cleared Memory: 0.116 seconds. 783s Processing reads in single-ended mode. 783s Started read stream. 783s Started 4 mapping threads. 783s Detecting finished threads: 0, 1, 2, 3 783s 783s ------------------ Results ------------------ 783s 783s Genome: 1 783s Key Length: 13 783s Max Indel: 16000 783s Minimum Score Ratio: 0.56 783s Mapping Mode: normal 783s Reads Used: 3 (75 bases) 783s 783s Mapping: 0.090 seconds. 783s Reads/sec: 33.16 783s kBases/sec: 0.83 783s 783s 783s Read 1 data: pct reads num reads pct bases num bases 783s 783s mapped: 100.0000% 3 100.0000% 75 783s unambiguous: 100.0000% 3 100.0000% 75 783s ambiguous: 0.0000% 0 0.0000% 0 783s low-Q discards: 0.0000% 0 0.0000% 0 783s 783s perfect best site: 100.0000% 3 100.0000% 75 783s semiperfect site: 100.0000% 3 100.0000% 75 783s 783s Match Rate: NA NA 100.0000% 75 783s Error Rate: 0.0000% 0 0.0000% 0 783s Sub Rate: 0.0000% 0 0.0000% 0 783s Del Rate: 0.0000% 0 0.0000% 0 783s Ins Rate: 0.0000% 0 0.0000% 0 783s N Rate: 0.0000% 0 0.0000% 0 783s 783s Total time: 4.775 seconds. 783s test -r out2.sam 783s 783s # bbduk 783s bbduk.sh --version 783s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 783s java -ea -Xmx1393m -Xms1393m -cp /usr/share/java/bbmap.jar jgi.BBDuk --version 783s BBMap version 39.06 783s For help, please run the shellscript with no parameters, or look in /docs/. 783s bbduk.sh --help 783s 783s Written by Brian Bushnell 783s Last modified November 9, 2023 783s 783s Description: Compares reads to the kmers in a reference dataset, optionally 783s allowing an edit distance. Splits the reads into two outputs - those that 783s match the reference, and those that don't. Can also trim (remove) the matching 783s parts of the reads rather than binning the reads. 783s Please read bbmap/docs/guides/BBDukGuide.txt for more information. 783s 783s Usage: bbduk.sh in= out= ref= 783s 783s Input may be stdin or a fasta or fastq file, compressed or uncompressed. 783s If you pipe via stdin/stdout, please include the file type; e.g. for gzipped 783s fasta input, set in=stdin.fa.gz 783s 783s Input parameters: 783s in= Main input. in=stdin.fq will pipe from stdin. 783s in2= Input for 2nd read of pairs in a different file. 783s ref= Comma-delimited list of reference files. 783s In addition to filenames, you may also use the keywords: 783s adapters, artifacts, phix, lambda, pjet, mtst, kapa 783s literal= Comma-delimited list of literal reference sequences. 783s touppercase=f (tuc) Change all bases upper-case. 783s interleaved=auto (int) t/f overrides interleaved autodetection. 783s Must be set mainually when streaming fastq input. 783s qin=auto Input quality offset: 33 (Sanger), 64, or auto. 783s reads=-1 If positive, quit after processing X reads or pairs. 783s copyundefined=f (cu) Process non-AGCT IUPAC reference bases by making all 783s possible unambiguous copies. Intended for short motifs 783s or adapter barcodes, as time/memory use is exponential. 783s samplerate=1 Set lower to only process a fraction of input reads. 783s samref= Optional reference fasta for processing sam files. 783s 783s Output parameters: 783s out= (outnonmatch) Write reads here that do not contain 783s kmers matching the database. 'out=stdout.fq' will pipe 783s to standard out. 783s out2= (outnonmatch2) Use this to write 2nd read of pairs to a 783s different file. 783s outm= (outmatch) Write reads here that fail filters. In default 783s kfilter mode, this means any read with a matching kmer. 783s In any mode, it also includes reads that fail filters such 783s as minlength, mingc, maxgc, entropy, etc. In other words, 783s it includes all reads that do not go to 'out'. 783s outm2= (outmatch2) Use this to write 2nd read of pairs to a 783s different file. 783s outs= (outsingle) Use this to write singleton reads whose mate 783s was trimmed shorter than minlen. 783s stats= Write statistics about which contamininants were detected. 783s refstats= Write statistics on a per-reference-file basis. 783s rpkm= Write RPKM for each reference sequence (for RNA-seq). 783s dump= Dump kmer tables to a file, in fasta format. 783s duk= Write statistics in duk's format. *DEPRECATED* 783s nzo=t Only write statistics about ref sequences with nonzero hits. 783s overwrite=t (ow) Grant permission to overwrite files. 783s showspeed=t (ss) 'f' suppresses display of processing speed. 783s ziplevel=2 (zl) Compression level; 1 (min) through 9 (max). 783s fastawrap=70 Length of lines in fasta output. 783s qout=auto Output quality offset: 33 (Sanger), 64, or auto. 783s statscolumns=3 (cols) Number of columns for stats output, 3 or 5. 783s 5 includes base counts. 783s rename=f Rename reads to indicate which sequences they matched. 783s refnames=f Use names of reference files rather than scaffold IDs. 783s trd=f Truncate read and ref names at the first whitespace. 783s ordered=f Set to true to output reads in same order as input. 783s maxbasesout=-1 If positive, quit after writing approximately this many 783s bases to out (outu/outnonmatch). 783s maxbasesoutm=-1 If positive, quit after writing approximately this many 783s bases to outm (outmatch). 783s json=f Print to screen in json format. 783s 783s Histogram output parameters: 783s bhist= Base composition histogram by position. 783s qhist= Quality histogram by position. 783s qchist= Count of bases with each quality value. 783s aqhist= Histogram of average read quality. 783s bqhist= Quality histogram designed for box plots. 783s lhist= Read length histogram. 783s phist= Polymer length histogram. 783s gchist= Read GC content histogram. 783s enthist= Read entropy histogram. 783s ihist= Insert size histogram, for paired reads in mapped sam. 783s gcbins=100 Number gchist bins. Set to 'auto' to use read length. 783s maxhistlen=6000 Set an upper bound for histogram lengths; higher uses 783s more memory. The default is 6000 for some histograms 783s and 80000 for others. 783s 783s Histograms for mapped sam/bam files only: 783s histbefore=t Calculate histograms from reads before processing. 783s ehist= Errors-per-read histogram. 783s qahist= Quality accuracy histogram of error rates versus quality 783s score. 783s indelhist= Indel length histogram. 783s mhist= Histogram of match, sub, del, and ins rates by position. 783s idhist= Histogram of read count versus percent identity. 783s idbins=100 Number idhist bins. Set to 'auto' to use read length. 783s varfile= Ignore substitution errors listed in this file when 783s calculating error rates. Can be generated with 783s CallVariants. 783s vcf= Ignore substitution errors listed in this VCF file 783s when calculating error rates. 783s ignorevcfindels=t Also ignore indels listed in the VCF. 783s 783s Processing parameters: 783s k=27 Kmer length used for finding contaminants. Contaminants 783s shorter than k will not be found. k must be at least 1. 783s rcomp=t Look for reverse-complements of kmers in addition to 783s forward kmers. 783s maskmiddle=t (mm) Treat the middle base of a kmer as a wildcard, to 783s increase sensitivity in the presence of errors. This may 783s also be set to a number, e.g. mm=3, to mask that many bp. 783s The default mm=t corresponds to mm=1 for odd-length kmers 783s and mm=2 for even-length kmers (as of v39.04), while 783s mm=f is always equivalent to mm=0. 783s minkmerhits=1 (mkh) Reads need at least this many matching kmers 783s to be considered as matching the reference. 783s minkmerfraction=0.0 (mkf) A reads needs at least this fraction of its total 783s kmers to hit a ref, in order to be considered a match. 783s If this and minkmerhits are set, the greater is used. 783s mincovfraction=0.0 (mcf) A reads needs at least this fraction of its total 783s bases to be covered by ref kmers to be considered a match. 783s If specified, mcf overrides mkh and mkf. 783s hammingdistance=0 (hdist) Maximum Hamming distance for ref kmers (subs only). 783s Memory use is proportional to (3*K)^hdist. 783s qhdist=0 Hamming distance for query kmers; impacts speed, not memory. 783s editdistance=0 (edist) Maximum edit distance from ref kmers (subs 783s and indels). Memory use is proportional to (8*K)^edist. 783s hammingdistance2=0 (hdist2) Sets hdist for short kmers, when using mink. 783s qhdist2=0 Sets qhdist for short kmers, when using mink. 783s editdistance2=0 (edist2) Sets edist for short kmers, when using mink. 783s forbidn=f (fn) Forbids matching of read kmers containing N. 783s By default, these will match a reference 'A' if 783s hdist>0 or edist>0, to increase sensitivity. 783s removeifeitherbad=t (rieb) Paired reads get sent to 'outmatch' if either is 783s match (or either is trimmed shorter than minlen). 783s Set to false to require both. 783s trimfailures=f Instead of discarding failed reads, trim them to 1bp. 783s This makes the statistics a bit odd. 783s findbestmatch=f (fbm) If multiple matches, associate read with sequence 783s sharing most kmers. Reduces speed. 783s skipr1=f Don't do kmer-based operations on read 1. 783s skipr2=f Don't do kmer-based operations on read 2. 783s ecco=f For overlapping paired reads only. Performs error- 783s correction with BBMerge prior to kmer operations. 783s recalibrate=f (recal) Recalibrate quality scores. Requires calibration 783s matrices generated by CalcTrueQuality. 783s sam= If recalibration is desired, and matrices have not already 783s been generated, BBDuk will create them from the sam file. 783s amino=f Run in amino acid mode. Some features have not been 783s tested, but kmer-matching works fine. Maximum k is 12. 783s 783s Speed and Memory parameters: 783s threads=auto (t) Set number of threads to use; default is number of 783s logical processors. 783s prealloc=f Preallocate memory in table. Allows faster table loading 783s and more efficient memory usage, for a large reference. 783s monitor=f Kill this process if it crashes. monitor=600,0.01 would 783s kill after 600 seconds under 1% usage. 783s minrskip=1 (mns) Force minimal skip interval when indexing reference 783s kmers. 1 means use all, 2 means use every other kmer, etc. 783s maxrskip=1 (mxs) Restrict maximal skip interval when indexing 783s reference kmers. Normally all are used for scaffolds<100kb, 783s but with longer scaffolds, up to maxrskip-1 are skipped. 783s rskip= Set both minrskip and maxrskip to the same value. 783s If not set, rskip will vary based on sequence length. 783s qskip=1 Skip query kmers to increase speed. 1 means use all. 783s speed=0 Ignore this fraction of kmer space (0-15 out of 16) in both 783s reads and reference. Increases speed and reduces memory. 783s Note: Do not use more than one of 'speed', 'qskip', and 'rskip'. 783s 783s Trimming/Filtering/Masking parameters: 783s Note - if ktrim, kmask, and ksplit are unset, the default behavior is kfilter. 783s All kmer processing modes are mutually exclusive. 783s Reads only get sent to 'outm' purely based on kmer matches in kfilter mode. 783s 783s ktrim=f Trim reads to remove bases matching reference kmers, plus 783s all bases to the left or right. 783s Values: 783s f (don't trim), 783s r (trim to the right), 783s l (trim to the left) 783s ktrimtips=0 Set this to a positive number to perform ktrim on both 783s ends, examining only the outermost X bases. 783s kmask= Replace bases matching ref kmers with another symbol. 783s Allows any non-whitespace character, and processes short 783s kmers on both ends if mink is set. 'kmask=lc' will 783s convert masked bases to lowercase. 783s maskfullycovered=f (mfc) Only mask bases that are fully covered by kmers. 783s ksplit=f For single-ended reads only. Reads will be split into 783s pairs around the kmer. If the kmer is at the end of the 783s read, it will be trimmed instead. Singletons will go to 783s out, and pairs will go to outm. Do not use ksplit with 783s other operations such as quality-trimming or filtering. 783s mink=0 Look for shorter kmers at read tips down to this length, 783s when k-trimming or masking. 0 means disabled. Enabling 783s this will disable maskmiddle. 783s qtrim=f Trim read ends to remove bases with quality below trimq. 783s Performed AFTER looking for kmers. Values: 783s rl (trim both ends), 783s f (neither end), 783s r (right end only), 783s l (left end only), 783s w (sliding window). 783s trimq=6 Regions with average quality BELOW this will be trimmed, 783s if qtrim is set to something other than f. Can be a 783s floating-point number like 7.3. 783s trimclip=f Trim soft-clipped bases from sam files. 783s minlength=10 (ml) Reads shorter than this after trimming will be 783s discarded. Pairs will be discarded if both are shorter. 783s mlf=0 (minlengthfraction) Reads shorter than this fraction of 783s original length after trimming will be discarded. 783s maxlength= Reads longer than this after trimming will be discarded. 783s minavgquality=0 (maq) Reads with average quality (after trimming) below 783s this will be discarded. 783s maqb=0 If positive, calculate maq from this many initial bases. 783s minbasequality=0 (mbq) Reads with any base below this quality (after 783s trimming) will be discarded. 783s maxns=-1 If non-negative, reads with more Ns than this 783s (after trimming) will be discarded. 783s mcb=0 (minconsecutivebases) Discard reads without at least 783s this many consecutive called bases. 783s ottm=f (outputtrimmedtomatch) Output reads trimmed to shorter 783s than minlength to outm rather than discarding. 783s tp=0 (trimpad) Trim this much extra around matching kmers. 783s tbo=f (trimbyoverlap) Trim adapters based on where paired 783s reads overlap. 783s strictoverlap=t Adjust sensitivity for trimbyoverlap mode. 783s minoverlap=14 Require this many bases of overlap for detection. 783s mininsert=40 Require insert size of at least this for overlap. 783s Should be reduced to 16 for small RNA sequencing. 783s tpe=f (trimpairsevenly) When kmer right-trimming, trim both 783s reads to the minimum length of either. 783s forcetrimleft=0 (ftl) If positive, trim bases to the left of this position 783s (exclusive, 0-based). 783s forcetrimright=0 (ftr) If positive, trim bases to the right of this position 783s (exclusive, 0-based). 783s forcetrimright2=0 (ftr2) If positive, trim this many bases on the right end. 783s forcetrimmod=0 (ftm) If positive, right-trim length to be equal to zero, 783s modulo this number. 783s restrictleft=0 If positive, only look for kmer matches in the 783s leftmost X bases. 783s restrictright=0 If positive, only look for kmer matches in the 783s rightmost X bases. 783s NOTE: restrictleft and restrictright are mutually exclusive. If trimming 783s both ends is desired, use ktrimtips. 783s mingc=0 Discard reads with GC content below this. 783s maxgc=1 Discard reads with GC content above this. 783s gcpairs=t Use average GC of paired reads. 783s Also affects gchist. 783s tossjunk=f Discard reads with invalid characters as bases. 783s swift=f Trim Swift sequences: Trailing C/T/N R1, leading G/A/N R2. 783s 783s Header-parsing parameters - these require Illumina headers: 783s chastityfilter=f (cf) Discard reads with id containing ' 1:Y:' or ' 2:Y:'. 783s barcodefilter=f Remove reads with unexpected barcodes if barcodes is set, 783s or barcodes containing 'N' otherwise. A barcode must be 783s the last part of the read header. Values: 783s t: Remove reads with bad barcodes. 783s f: Ignore barcodes. 783s crash: Crash upon encountering bad barcodes. 783s barcodes= Comma-delimited list of barcodes or files of barcodes. 783s xmin=-1 If positive, discard reads with a lesser X coordinate. 783s ymin=-1 If positive, discard reads with a lesser Y coordinate. 783s xmax=-1 If positive, discard reads with a greater X coordinate. 783s ymax=-1 If positive, discard reads with a greater Y coordinate. 783s 783s Polymer trimming: 783s trimpolya=0 If greater than 0, trim poly-A or poly-T tails of 783s at least this length on either end of reads. 783s trimpolygleft=0 If greater than 0, trim poly-G prefixes of at least this 783s length on the left end of reads. Does not trim poly-C. 783s trimpolygright=0 If greater than 0, trim poly-G tails of at least this 783s length on the right end of reads. Does not trim poly-C. 783s trimpolyg=0 This sets both left and right at once. 783s filterpolyg=0 If greater than 0, remove reads with a poly-G prefix of 783s at least this length (on the left). 783s Note: there are also equivalent poly-C flags. 783s 783s Polymer tracking: 783s pratio=base,base 'pratio=G,C' will print the ratio of G to C polymers. 783s plen=20 Length of homopolymers to count. 783s 783s Entropy/Complexity parameters: 783s entropy=-1 Set between 0 and 1 to filter reads with entropy below 783s that value. Higher is more stringent. 783s entropywindow=50 Calculate entropy using a sliding window of this length. 783s entropyk=5 Calculate entropy using kmers of this length. 783s minbasefrequency=0 Discard reads with a minimum base frequency below this. 783s entropytrim=f Values: 783s f: (false) Do not entropy-trim. 783s r: (right) Trim low entropy on the right end only. 783s l: (left) Trim low entropy on the left end only. 783s rl: (both) Trim low entropy on both ends. 783s entropymask=f Values: 783s f: (filter) Discard low-entropy sequences. 783s t: (true) Mask low-entropy parts of sequences with N. 783s lc: Change low-entropy parts of sequences to lowercase. 783s entropymark=f Mark each base with its entropy value. This is on a scale 783s of 0-41 and is reported as quality scores, so the output 783s should be fastq or fasta+qual. 783s NOTE: If set, entropytrim overrides entropymask. 783s 783s Cardinality estimation: 783s cardinality=f (loglog) Count unique kmers using the LogLog algorithm. 783s cardinalityout=f (loglogout) Count unique kmers in output reads. 783s loglogk=31 Use this kmer length for counting. 783s loglogbuckets=2048 Use this many buckets for counting. 783s khist= Kmer frequency histogram; plots number of kmers versus 783s kmer depth. This is approximate. 783s khistout= Kmer frequency histogram for output reads. 783s 783s Java Parameters: 783s 783s -Xmx This will set Java's memory usage, overriding autodetection. 783s -Xmx20g will 783s specify 20 gigs of RAM, and -Xmx200m will specify 200 megs. 783s The max is typically 85% of physical memory. 783s -eoom This flag will cause the process to exit if an 783s out-of-memory exception occurs. Requires Java 8u92+. 783s -da Disable assertions. 783s 783s Please contact Brian Bushnell at bbushnell@lbl.gov if you encounter any problems. 783s 783s bbduk.sh in1=misc_dna_as_illumina.fastq in2=misc_rna_as_illumina.fastq \ 783s qtrim=rl trimq=15 minlen=75 out=out.fastq.gz 783s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 783s java -ea -Xmx1393m -Xms1393m -cp /usr/share/java/bbmap.jar jgi.BBDuk in1=misc_dna_as_illumina.fastq in2=misc_rna_as_illumina.fastq qtrim=rl trimq=15 minlen=75 out=out.fastq.gz 783s Executing jgi.BBDuk [in1=misc_dna_as_illumina.fastq, in2=misc_rna_as_illumina.fastq, qtrim=rl, trimq=15, minlen=75, out=out.fastq.gz] 783s Version 39.06 783s 783s 0.015 seconds. 783s Initial: 783s Memory: max=1461m, total=1461m, free=1431m, used=30m 783s 783s Input is being processed as paired 783s Changed from ASCII-33 to ASCII-64 on input 7: 55 -> 24 783s Started output streams: 0.016 seconds. 783s Processing time: 0.004 seconds. 783s 783s Input: 8 reads 306 bases. 783s QTrimmed: 0 reads (0.00%) 0 bases (0.00%) 783s Total Removed: 8 reads (100.00%) 306 bases (100.00%) 783s Result: 0 reads (0.00%) 0 bases (0.00%) 783s 783s Time: 0.022 seconds. 783s Reads Processed: 8 0.37k reads/sec 783s Bases Processed: 306 0.01m bases/sec 783s test -r out.fastq.gz 783s 783s # bbnorm 783s bbnorm.sh --version 783s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 783s java -ea -Xmx2787m -Xms2787m -cp /usr/share/java/bbmap.jar jgi.KmerNormalize bits=32 --version 784s BBMap version 39.06 784s For help, please run the shellscript with no parameters, or look in /docs/. 784s bbnorm.sh --help 784s 784s Written by Brian Bushnell 784s Last modified October 19, 2017 784s 784s Description: Normalizes read depth based on kmer counts. 784s Can also error-correct, bin reads by kmer depth, and generate a kmer depth histogram. 784s However, Tadpole has superior error-correction to BBNorm. 784s Please read bbmap/docs/guides/BBNormGuide.txt for more information. 784s 784s Usage: bbnorm.sh in= out= outt= hist= 784s 784s Input parameters: 784s in=null Primary input. Use in2 for paired reads in a second file 784s in2=null Second input file for paired reads in two files 784s extra=null Additional files to use for input (generating hash table) but not for output 784s fastareadlen=2^31 Break up FASTA reads longer than this. Can be useful when processing scaffolded genomes 784s tablereads=-1 Use at most this many reads when building the hashtable (-1 means all) 784s kmersample=1 Process every nth kmer, and skip the rest 784s readsample=1 Process every nth read, and skip the rest 784s interleaved=auto May be set to true or false to force the input read file to ovverride autodetection of the input file as paired interleaved. 784s qin=auto ASCII offset for input quality. May be 33 (Sanger), 64 (Illumina), or auto. 784s 784s Output parameters: 784s out= File for normalized or corrected reads. Use out2 for paired reads in a second file 784s outt= (outtoss) File for reads that were excluded from primary output 784s reads=-1 Only process this number of reads, then quit (-1 means all) 784s sampleoutput=t Use sampling on output as well as input (not used if sample rates are 1) 784s keepall=f Set to true to keep all reads (e.g. if you just want error correction). 784s zerobin=f Set to true if you want kmers with a count of 0 to go in the 0 bin instead of the 1 bin in histograms. 784s Default is false, to prevent confusion about how there can be 0-count kmers. 784s The reason is that based on the 'minq' and 'minprob' settings, some kmers may be excluded from the bloom filter. 784s tmpdir= This will specify a directory for temp files (only needed for multipass runs). If null, they will be written to the output directory. 784s usetempdir=t Allows enabling/disabling of temporary directory; if disabled, temp files will be written to the output directory. 784s qout=auto ASCII offset for output quality. May be 33 (Sanger), 64 (Illumina), or auto (same as input). 784s rename=f Rename reads based on their kmer depth. 784s 784s Hashing parameters: 784s k=31 Kmer length (values under 32 are most efficient, but arbitrarily high values are supported) 784s bits=32 Bits per cell in bloom filter; must be 2, 4, 8, 16, or 32. Maximum kmer depth recorded is 2^cbits. Automatically reduced to 16 in 2-pass. 784s Large values decrease accuracy for a fixed amount of memory, so use the lowest number you can that will still capture highest-depth kmers. 784s hashes=3 Number of times each kmer is hashed and stored. Higher is slower. 784s Higher is MORE accurate if there is enough memory, and LESS accurate if there is not enough memory. 784s prefilter=f True is slower, but generally more accurate; filters out low-depth kmers from the main hashtable. The prefilter is more memory-efficient because it uses 2-bit cells. 784s prehashes=2 Number of hashes for prefilter. 784s prefilterbits=2 (pbits) Bits per cell in prefilter. 784s prefiltersize=0.35 Fraction of memory to allocate to prefilter. 784s buildpasses=1 More passes can sometimes increase accuracy by iteratively removing low-depth kmers 784s minq=6 Ignore kmers containing bases with quality below this 784s minprob=0.5 Ignore kmers with overall probability of correctness below this 784s threads=auto (t) Spawn exactly X hashing threads (default is number of logical processors). Total active threads may exceed X due to I/O threads. 784s rdk=t (removeduplicatekmers) When true, a kmer's count will only be incremented once per read pair, even if that kmer occurs more than once. 784s 784s Normalization parameters: 784s fixspikes=f (fs) Do a slower, high-precision bloom filter lookup of kmers that appear to have an abnormally high depth due to collisions. 784s target=100 (tgt) Target normalization depth. NOTE: All depth parameters control kmer depth, not read depth. 784s For kmer depth Dk, read depth Dr, read length R, and kmer size K: Dr=Dk*(R/(R-K+1)) 784s maxdepth=-1 (max) Reads will not be downsampled when below this depth, even if they are above the target depth. 784s mindepth=5 (min) Kmers with depth below this number will not be included when calculating the depth of a read. 784s minkmers=15 (mgkpr) Reads must have at least this many kmers over min depth to be retained. Aka 'mingoodkmersperread'. 784s percentile=54.0 (dp) Read depth is by default inferred from the 54th percentile of kmer depth, but this may be changed to any number 1-100. 784s uselowerdepth=t (uld) For pairs, use the depth of the lower read as the depth proxy. 784s deterministic=t (dr) Generate random numbers deterministically to ensure identical output between multiple runs. May decrease speed with a huge number of threads. 784s passes=2 (p) 1 pass is the basic mode. 2 passes (default) allows greater accuracy, error detection, better contol of output depth. 784s 784s Error detection parameters: 784s hdp=90.0 (highdepthpercentile) Position in sorted kmer depth array used as proxy of a read's high kmer depth. 784s ldp=25.0 (lowdepthpercentile) Position in sorted kmer depth array used as proxy of a read's low kmer depth. 784s tossbadreads=f (tbr) Throw away reads detected as containing errors. 784s requirebothbad=f (rbb) Only toss bad pairs if both reads are bad. 784s errordetectratio=125 (edr) Reads with a ratio of at least this much between their high and low depth kmers will be classified as error reads. 784s highthresh=12 (ht) Threshold for high kmer. A high kmer at this or above are considered non-error. 784s lowthresh=3 (lt) Threshold for low kmer. Kmers at this and below are always considered errors. 784s 784s Error correction parameters: 784s ecc=f Set to true to correct errors. NOTE: Tadpole is now preferred for ecc as it does a better job. 784s ecclimit=3 Correct up to this many errors per read. If more are detected, the read will remain unchanged. 784s errorcorrectratio=140 (ecr) Adjacent kmers with a depth ratio of at least this much between will be classified as an error. 784s echighthresh=22 (echt) Threshold for high kmer. A kmer at this or above may be considered non-error. 784s eclowthresh=2 (eclt) Threshold for low kmer. Kmers at this and below are considered errors. 784s eccmaxqual=127 Do not correct bases with quality above this value. 784s aec=f (aggressiveErrorCorrection) Sets more aggressive values of ecr=100, ecclimit=7, echt=16, eclt=3. 784s cec=f (conservativeErrorCorrection) Sets more conservative values of ecr=180, ecclimit=2, echt=30, eclt=1, sl=4, pl=4. 784s meo=f (markErrorsOnly) Marks errors by reducing quality value of suspected errors; does not correct anything. 784s mue=t (markUncorrectableErrors) Marks errors only on uncorrectable reads; requires 'ecc=t'. 784s overlap=f (ecco) Error correct by read overlap. 784s 784s Depth binning parameters: 784s lowbindepth=10 (lbd) Cutoff for low depth bin. 784s highbindepth=80 (hbd) Cutoff for high depth bin. 784s outlow= Pairs in which both reads have a median below lbd go into this file. 784s outhigh= Pairs in which both reads have a median above hbd go into this file. 784s outmid= All other pairs go into this file. 784s 784s Histogram parameters: 784s hist= Specify a file to write the input kmer depth histogram. 784s histout= Specify a file to write the output kmer depth histogram. 784s histcol=3 (histogramcolumns) Number of histogram columns, 2 or 3. 784s pzc=f (printzerocoverage) Print lines in the histogram with zero coverage. 784s histlen=1048576 Max kmer depth displayed in histogram. Also affects statistics displayed, but does not affect normalization. 784s 784s Peak calling parameters: 784s peaks= Write the peaks to this file. Default is stdout. 784s minHeight=2 (h) Ignore peaks shorter than this. 784s minVolume=5 (v) Ignore peaks with less area than this. 784s minWidth=3 (w) Ignore peaks narrower than this. 784s minPeak=2 (minp) Ignore peaks with an X-value below this. 784s maxPeak=BIG (maxp) Ignore peaks with an X-value above this. 784s maxPeakCount=8 (maxpc) Print up to this many peaks (prioritizing height). 784s 784s Java Parameters: 784s -Xmx This will set Java's memory usage, overriding autodetection. 784s -Xmx20g will specify 20 gigs of RAM, and -Xmx200m will specify 200 megs. 784s The max is typically 85% of physical memory. 784s -eoom This flag will cause the process to exit if an 784s out-of-memory exception occurs. Requires Java 8u92+. 784s -da Disable assertions. 784s 784s Please contact Brian Bushnell at bbushnell@lbl.gov if you encounter any problems. 784s 784s bbnorm.sh in=sanger_full_range_original_sanger.fastq qin=33 \ 784s out=out3.fastq outt=outt.fastq hist=hist.plt 784s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 784s java -ea -Xmx2787m -Xms2787m -cp /usr/share/java/bbmap.jar jgi.KmerNormalize bits=32 in=sanger_full_range_original_sanger.fastq qin=33 out=out3.fastq outt=outt.fastq hist=hist.plt 784s Executing jgi.KmerNormalize [bits=32, in=sanger_full_range_original_sanger.fastq, qin=33, out=out3.fastq, outt=outt.fastq, hist=hist.plt] 784s 784s 784s *********** Pass 1 ********** 784s 784s 784s Settings: 784s threads: 4 784s k: 31 784s deterministic: true 784s toss error reads: false 784s passes: 1 784s bits per cell: 16 784s cells: 1031.49M 784s hashes: 3 784s base min quality: 5 784s kmer min prob: 0.5 784s 784s target depth: 400 784s min depth: 3 784s max depth: 500 784s min good kmers: 15 784s depth percentile: 64.8 784s ignore dupe kmers: true 784s fix spikes: false 784s histogram length: 65536 784s print zero cov: false 784s 785s Made hash table: hashes = 3 mem = 1.92 GB cells = 1030.72M used = 0.000% 785s 785s Estimated unique kmers: 7 785s 785s Table creation time: 0.958 seconds. 785s Started output threads. 785s Started output threads. 785s Table read time: 0.006 seconds. 29.99 kb/sec 785s Total reads in: 2 0.000% Kept 785s Total bases in: 188 0.000% Kept 785s Error reads in: 2 100.000% 785s Error type 1: 2 100.000% 785s Error type 2: 0 0.000% 785s Error type 3: 0 0.000% 785s 785s Wrote histogram to hist.plt 785s Total kmers counted: 128 785s Total unique kmer count: 128 785s Includes forward kmers only. 785s The unique kmer estimate can be more accurate than the unique count, if the tables are very full. 785s The most accurate value is the greater of the two. 785s 785s Percent unique: 100.00% 785s Depth average: 1.00 (unique kmers) 785s Depth median: 1 (unique kmers) 785s Depth standard deviation: 0.00 (unique kmers) 785s Corrected depth average: 0.00 785s 785s Depth average: 1.00 (all kmers) 785s Depth median: 1 (all kmers) 785s Depth standard deviation: 0.00 (all kmers) 785s 785s Approx. read depth median: 1.47 785s 785s *********** Pass 2 ********** 785s 785s 785s Settings: 785s threads: 4 785s k: 31 785s deterministic: true 785s toss error reads: false 785s passes: 1 785s bits per cell: 16 785s cells: 1031.49M 785s hashes: 3 785s base min quality: 5 785s kmer min prob: 0.5 785s 785s target depth: 100 785s min depth: 5 785s max depth: 100 785s min good kmers: 15 785s depth percentile: 54.0 785s ignore dupe kmers: true 785s fix spikes: false 785s histogram length: 65536 785s 785s Made hash table: hashes = 3 mem = 1.92 GB cells = 1030.72M used = 0.000% 785s 785s Estimated unique kmers: 0 785s 785s Table creation time: 0.380 seconds. 785s Started output threads. 785s Started output threads. 785s Table read time: 0.001 seconds. 0.00 kb/sec 785s Total reads in: 0 NaN% Kept 785s Total bases in: 0 NaN% Kept 785s Error reads in: 0 NaN% 785s Error type 1: 0 NaN% 785s Error type 2: 0 NaN% 785s Error type 3: 0 NaN% 785s Total kmers counted: 0 785s Total unique kmer count: 0 785s Includes forward kmers only. 785s The unique kmer estimate can be more accurate than the unique count, if the tables are very full. 785s The most accurate value is the greater of the two. 785s 785s Percent unique: NaN% 785s Depth average: NaN (unique kmers) 785s Depth median: 0 (unique kmers) 785s Depth standard deviation: NaN (unique kmers) 785s Corrected depth average: NaN 785s 785s Depth average: NaN (all kmers) 785s Depth median: 0 (all kmers) 785s Depth standard deviation: 0.00 (all kmers) 785s 785s Approx. read depth median: NaN 785s 785s Removing temp files. 785s 785s Total time: 1.438 seconds. 0.13 kb/sec 786s test -r out3.fastq 786s test -r outt.fastq 786s test -r hist.plt 786s bbnorm.sh in=illumina_full_range_original_illumina.fastq qin=64 \ 786s out=out4.fastq outt=outt2.fastq hist=hist2.plt 786s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 786s java -ea -Xmx2787m -Xms2787m -cp /usr/share/java/bbmap.jar jgi.KmerNormalize bits=32 in=illumina_full_range_original_illumina.fastq qin=64 out=out4.fastq outt=outt2.fastq hist=hist2.plt 786s Executing jgi.KmerNormalize [bits=32, in=illumina_full_range_original_illumina.fastq, qin=64, out=out4.fastq, outt=outt2.fastq, hist=hist2.plt] 786s 786s 786s *********** Pass 1 ********** 786s 786s 786s Settings: 786s threads: 4 786s k: 31 786s deterministic: true 786s toss error reads: false 786s passes: 1 786s bits per cell: 16 786s cells: 1031.49M 786s hashes: 3 786s base min quality: 5 786s kmer min prob: 0.5 786s 786s target depth: 400 786s min depth: 3 786s max depth: 500 786s min good kmers: 15 786s depth percentile: 64.8 786s ignore dupe kmers: true 786s fix spikes: false 786s histogram length: 65536 786s print zero cov: false 786s 787s Made hash table: hashes = 3 mem = 1.92 GB cells = 1030.72M used = 0.000% 787s 787s Estimated unique kmers: 7 787s 787s Table creation time: 0.960 seconds. 787s Started output threads. 787s Started output threads. 787s Table read time: 0.005 seconds. 22.95 kb/sec 787s Total reads in: 2 0.000% Kept 787s Total bases in: 126 0.000% Kept 787s Error reads in: 2 100.000% 787s Error type 1: 2 100.000% 787s Error type 2: 0 0.000% 787s Error type 3: 0 0.000% 787s 787s Wrote histogram to hist2.plt 787s Total kmers counted: 66 787s Total unique kmer count: 66 787s Includes forward kmers only. 787s The unique kmer estimate can be more accurate than the unique count, if the tables are very full. 787s The most accurate value is the greater of the two. 787s 787s Percent unique: 100.00% 787s Depth average: 1.00 (unique kmers) 787s Depth median: 1 (unique kmers) 787s Depth standard deviation: 0.00 (unique kmers) 787s Corrected depth average: 0.00 787s 787s Depth average: 1.00 (all kmers) 787s Depth median: 1 (all kmers) 787s Depth standard deviation: 0.00 (all kmers) 787s 787s Approx. read depth median: 1.91 787s 787s *********** Pass 2 ********** 787s 787s 787s Settings: 787s threads: 4 787s k: 31 787s deterministic: true 787s toss error reads: false 787s passes: 1 787s bits per cell: 16 787s cells: 1031.49M 787s hashes: 3 787s base min quality: 5 787s kmer min prob: 0.5 787s 787s target depth: 100 787s min depth: 5 787s max depth: 100 787s min good kmers: 15 787s depth percentile: 54.0 787s ignore dupe kmers: true 787s fix spikes: false 787s histogram length: 65536 787s 787s Made hash table: hashes = 3 mem = 1.92 GB cells = 1030.72M used = 0.000% 787s 787s Estimated unique kmers: 0 787s 787s Table creation time: 0.393 seconds. 787s Started output threads. 787s Started output threads. 787s Table read time: 0.001 seconds. 0.00 kb/sec 787s Total reads in: 0 NaN% Kept 787s Total bases in: 0 NaN% Kept 787s Error reads in: 0 NaN% 787s Error type 1: 0 NaN% 787s Error type 2: 0 NaN% 787s Error type 3: 0 NaN% 787s Total kmers counted: 0 787s Total unique kmer count: 0 787s Includes forward kmers only. 787s The unique kmer estimate can be more accurate than the unique count, if the tables are very full. 787s The most accurate value is the greater of the two. 787s 787s Percent unique: NaN% 787s Depth average: NaN (unique kmers) 787s Depth median: 0 (unique kmers) 787s Depth standard deviation: NaN (unique kmers) 787s Corrected depth average: NaN 787s 787s Depth average: NaN (all kmers) 787s Depth median: 0 (all kmers) 787s Depth standard deviation: 0.00 (all kmers) 787s 787s Approx. read depth median: NaN 787s 787s Removing temp files. 787s 787s Total time: 1.464 seconds. 0.09 kb/sec 787s test -r out4.fastq 787s test -r outt2.fastq 787s test -r hist2.plt 788s autopkgtest [11:38:49]: test run-unit-test: -----------------------] 788s autopkgtest [11:38:49]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 788s run-unit-test PASS 788s autopkgtest [11:38:49]: @@@@@@@@@@@@@@@@@@@@ summary 788s run-unit-test PASS 800s Creating nova instance adt-noble-amd64-bbmap-20240327-112541-juju-7f2275-prod-proposed-migration-environment-3-f99a8b9f-c5ec-4157-a974-5c043008a764 from image adt/ubuntu-noble-amd64-server-20240326.img (UUID cbdbe79e-04a9-406e-8b2a-dc1aaa88a200)...