0s autopkgtest [12:44:08]: starting date and time: 2024-03-21 12:44:08+0000 0s autopkgtest [12:44:08]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [12:44:08]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.6szgalqm/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:nvidia-cuda-toolkit,src:alsa-lib,src:curl,src:db5.3,src:elfutils,src:glib2.0,src:gnutls28,src:libpsl,src:nettle,src:openssl,src:python3.12,src:readline --apt-upgrade bart-cuda --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=nvidia-cuda-toolkit/12.0.1-4build3 alsa-lib/1.2.11-1build1 curl/8.5.0-2ubuntu7 db5.3/5.3.28+dfsg2-5build1 elfutils/0.190-1.1build2 glib2.0/2.79.3-3ubuntu5 gnutls28/3.8.3-1.1ubuntu2 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2 python3.12/3.12.2-4build3 readline/8.2-3.1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-82.secgroup --name adt-noble-amd64-bart-cuda-20240321-124408-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 238s autopkgtest [12:48:06]: testbed dpkg architecture: amd64 238s autopkgtest [12:48:06]: testbed apt version: 2.7.12 238s autopkgtest [12:48:06]: @@@@@@@@@@@@@@@@@@@@ test bed setup 238s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 238s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 238s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3774 kB] 238s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [495 kB] 238s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 238s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [696 kB] 238s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main i386 Packages [460 kB] 238s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 c-n-f Metadata [3508 B] 238s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted i386 Packages [6700 B] 238s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 Packages [30.5 kB] 238s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/restricted amd64 c-n-f Metadata [116 B] 238s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [4238 kB] 238s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe i386 Packages [1273 kB] 238s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 c-n-f Metadata [9396 B] 238s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 Packages [93.7 kB] 238s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/multiverse i386 Packages [26.8 kB] 238s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/multiverse amd64 c-n-f Metadata [196 B] 241s Fetched 11.3 MB in 1s (7562 kB/s) 242s Reading package lists... 243s Reading package lists... 244s Building dependency tree... 244s Reading state information... 244s Calculating upgrade... 244s The following packages will be REMOVED: 244s libglib2.0-0 libreadline8 libssl3 244s The following NEW packages will be installed: 244s libglib2.0-0t64 libreadline8t64 libssl3t64 xdg-user-dirs 244s The following packages have been kept back: 244s curl libpython3.12-minimal libpython3.12-stdlib python3.12 244s python3.12-minimal 244s The following packages will be upgraded: 244s debianutils gir1.2-glib-2.0 libglib2.0-data linux-firmware openssl 244s readline-common 244s 6 upgraded, 4 newly installed, 3 to remove and 5 not upgraded. 244s Need to get 480 MB of archives. 244s After this operation, 6027 kB of additional disk space will be used. 244s Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 debianutils amd64 5.17 [89.8 kB] 244s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 gir1.2-glib-2.0 amd64 2.79.3-3ubuntu5 [183 kB] 244s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libglib2.0-0t64 amd64 2.79.3-3ubuntu5 [1540 kB] 244s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 readline-common all 8.2-3.1 [56.4 kB] 244s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libreadline8t64 amd64 8.2-3.1 [153 kB] 244s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 openssl amd64 3.0.13-0ubuntu2 [1002 kB] 244s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libssl3t64 amd64 3.0.13-0ubuntu2 [1936 kB] 244s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 244s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 xdg-user-dirs amd64 0.18-1 [18.4 kB] 244s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 linux-firmware amd64 20240318.git3b128b60-0ubuntu1 [475 MB] 248s Fetched 480 MB in 4s (132 MB/s) 248s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 248s Preparing to unpack .../debianutils_5.17_amd64.deb ... 248s Unpacking debianutils (5.17) over (5.16) ... 248s Setting up debianutils (5.17) ... 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 249s Preparing to unpack .../gir1.2-glib-2.0_2.79.3-3ubuntu5_amd64.deb ... 249s Unpacking gir1.2-glib-2.0:amd64 (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 249s dpkg: libglib2.0-0:amd64: dependency problems, but removing anyway as you requested: 249s udisks2 depends on libglib2.0-0 (>= 2.77.0). 249s shared-mime-info depends on libglib2.0-0 (>= 2.75.3). 249s python3-gi depends on libglib2.0-0 (>= 2.77.0). 249s python3-dbus depends on libglib2.0-0 (>= 2.16.0). 249s netplan.io depends on libglib2.0-0 (>= 2.70.0). 249s netplan-generator depends on libglib2.0-0 (>= 2.70.0). 249s libxmlb2:amd64 depends on libglib2.0-0 (>= 2.54.0). 249s libvolume-key1:amd64 depends on libglib2.0-0 (>= 2.18.0). 249s libudisks2-0:amd64 depends on libglib2.0-0 (>= 2.75.3). 249s libqrtr-glib0:amd64 depends on libglib2.0-0 (>= 2.56). 249s libqmi-proxy depends on libglib2.0-0 (>= 2.30.0). 249s libqmi-glib5:amd64 depends on libglib2.0-0 (>= 2.54.0). 249s libpolkit-gobject-1-0:amd64 depends on libglib2.0-0 (>= 2.38.0). 249s libpolkit-agent-1-0:amd64 depends on libglib2.0-0 (>= 2.38.0). 249s libnetplan0:amd64 depends on libglib2.0-0 (>= 2.75.3). 249s libmm-glib0:amd64 depends on libglib2.0-0 (>= 2.62.0). 249s libmbim-proxy depends on libglib2.0-0 (>= 2.56). 249s libmbim-glib4:amd64 depends on libglib2.0-0 (>= 2.56). 249s libjson-glib-1.0-0:amd64 depends on libglib2.0-0 (>= 2.75.3). 249s libjcat1:amd64 depends on libglib2.0-0 (>= 2.75.3). 249s libgusb2:amd64 depends on libglib2.0-0 (>= 2.75.3). 249s libgudev-1.0-0:amd64 depends on libglib2.0-0 (>= 2.38.0). 249s libgirepository-1.0-1:amd64 depends on libglib2.0-0 (>= 2.79.0). 249s libfwupd2:amd64 depends on libglib2.0-0 (>= 2.79.0). 249s libblockdev3:amd64 depends on libglib2.0-0 (>= 2.42.2). 249s libblockdev-utils3:amd64 depends on libglib2.0-0 (>= 2.75.3). 249s libblockdev-swap3:amd64 depends on libglib2.0-0 (>= 2.42.2). 249s libblockdev-part3:amd64 depends on libglib2.0-0 (>= 2.42.2). 249s libblockdev-nvme3:amd64 depends on libglib2.0-0 (>= 2.42.2). 249s libblockdev-mdraid3:amd64 depends on libglib2.0-0 (>= 2.42.2). 249s libblockdev-loop3:amd64 depends on libglib2.0-0 (>= 2.42.2). 249s libblockdev-fs3:amd64 depends on libglib2.0-0 (>= 2.42.2). 249s libblockdev-crypto3:amd64 depends on libglib2.0-0 (>= 2.42.2). 249s fwupd depends on libglib2.0-0 (>= 2.79.0). 249s bolt depends on libglib2.0-0 (>= 2.56.0). 249s 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 249s Removing libglib2.0-0:amd64 (2.79.2-1~ubuntu1) ... 249s Selecting previously unselected package libglib2.0-0t64:amd64. 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71778 files and directories currently installed.) 249s Preparing to unpack .../libglib2.0-0t64_2.79.3-3ubuntu5_amd64.deb ... 249s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:amd64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 249s removed '/var/lib/dpkg/info/libglib2.0-0:amd64.postrm' 249s Unpacking libglib2.0-0t64:amd64 (2.79.3-3ubuntu5) ... 249s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 249s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 249s dpkg: libreadline8:amd64: dependency problems, but removing anyway as you requested: 249s parted depends on libreadline8 (>= 6.0). 249s libpython3.12-stdlib:amd64 depends on libreadline8 (>= 7.0~beta). 249s libpython3.11-stdlib:amd64 depends on libreadline8 (>= 7.0~beta). 249s gpgsm depends on libreadline8 (>= 6.0). 249s gpgconf depends on libreadline8 (>= 6.0). 249s gpg depends on libreadline8 (>= 6.0). 249s gawk depends on libreadline8 (>= 6.0). 249s fdisk depends on libreadline8 (>= 6.0). 249s 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71803 files and directories currently installed.) 249s Removing libreadline8:amd64 (8.2-3) ... 249s Selecting previously unselected package libreadline8t64:amd64. 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71791 files and directories currently installed.) 249s Preparing to unpack .../libreadline8t64_8.2-3.1_amd64.deb ... 249s Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 249s Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 249s Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 249s Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 249s Unpacking libreadline8t64:amd64 (8.2-3.1) ... 249s Preparing to unpack .../openssl_3.0.13-0ubuntu2_amd64.deb ... 249s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 249s dpkg: libssl3:amd64: dependency problems, but removing anyway as you requested: 249s wget depends on libssl3 (>= 3.0.0). 249s tnftp depends on libssl3 (>= 3.0.0). 249s tcpdump depends on libssl3 (>= 3.0.0). 249s systemd-resolved depends on libssl3 (>= 3.0.0). 249s systemd depends on libssl3 (>= 3.0.0). 249s sudo depends on libssl3 (>= 3.0.0). 249s sbsigntool depends on libssl3 (>= 3.0.0). 249s rsync depends on libssl3 (>= 3.0.0). 249s python3-cryptography depends on libssl3 (>= 3.0.0). 249s openssh-server depends on libssl3 (>= 3.0.10). 249s openssh-client depends on libssl3 (>= 3.0.10). 249s mokutil depends on libssl3 (>= 3.0.0). 249s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 249s libtss2-esys-3.0.2-0:amd64 depends on libssl3 (>= 3.0.0). 249s libsystemd-shared:amd64 depends on libssl3 (>= 3.0.0). 249s libssh-4:amd64 depends on libssl3 (>= 3.0.0). 249s libsasl2-modules:amd64 depends on libssl3 (>= 3.0.0). 249s libsasl2-2:amd64 depends on libssl3 (>= 3.0.0). 249s libpython3.12-minimal:amd64 depends on libssl3 (>= 3.0.0). 249s libpython3.11-minimal:amd64 depends on libssl3 (>= 3.0.0). 249s libnvme1 depends on libssl3 (>= 3.0.0). 249s libkrb5-3:amd64 depends on libssl3 (>= 3.0.0). 249s libkmod2:amd64 depends on libssl3 (>= 3.0.0). 249s libfido2-1:amd64 depends on libssl3 (>= 3.0.0). 249s libcurl4:amd64 depends on libssl3 (>= 3.0.0). 249s libcryptsetup12:amd64 depends on libssl3 (>= 3.0.0). 249s kmod depends on libssl3 (>= 3.0.0). 249s dhcpcd-base depends on libssl3 (>= 3.0.0). 249s coreutils depends on libssl3 (>= 3.0.0). 249s bind9-libs:amd64 depends on libssl3 (>= 3.0.0). 249s 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71811 files and directories currently installed.) 249s Removing libssl3:amd64 (3.0.10-1ubuntu4) ... 249s Selecting previously unselected package libssl3t64:amd64. 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71800 files and directories currently installed.) 249s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_amd64.deb ... 249s Unpacking libssl3t64:amd64 (3.0.13-0ubuntu2) ... 249s Setting up libssl3t64:amd64 (3.0.13-0ubuntu2) ... 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71813 files and directories currently installed.) 249s Preparing to unpack .../libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 249s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 249s Selecting previously unselected package xdg-user-dirs. 249s Preparing to unpack .../xdg-user-dirs_0.18-1_amd64.deb ... 249s Unpacking xdg-user-dirs (0.18-1) ... 249s Preparing to unpack .../linux-firmware_20240318.git3b128b60-0ubuntu1_amd64.deb ... 249s Unpacking linux-firmware (20240318.git3b128b60-0ubuntu1) over (20240202.git36777504-0ubuntu1) ... 253s Setting up xdg-user-dirs (0.18-1) ... 253s Setting up linux-firmware (20240318.git3b128b60-0ubuntu1) ... 253s Setting up libglib2.0-0t64:amd64 (2.79.3-3ubuntu5) ... 253s No schema files found: doing nothing. 253s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 253s Setting up gir1.2-glib-2.0:amd64 (2.79.3-3ubuntu5) ... 253s Setting up openssl (3.0.13-0ubuntu2) ... 253s Setting up readline-common (8.2-3.1) ... 253s Setting up libreadline8t64:amd64 (8.2-3.1) ... 253s Processing triggers for libc-bin (2.39-0ubuntu2) ... 253s Processing triggers for man-db (2.12.0-3) ... 254s Processing triggers for install-info (7.1-3) ... 254s Processing triggers for initramfs-tools (0.142ubuntu20) ... 254s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 254s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 262s Reading package lists... 262s Building dependency tree... 262s Reading state information... 262s 0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded. 263s sh: Attempting to set up Debian/Ubuntu apt sources automatically 263s sh: Distribution appears to be Ubuntu 264s Reading package lists... 264s Building dependency tree... 264s Reading state information... 265s eatmydata is already the newest version (131-1). 265s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 265s Reading package lists... 265s Building dependency tree... 265s Reading state information... 265s dbus is already the newest version (1.14.10-4ubuntu1). 265s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 265s Reading package lists... 266s Building dependency tree... 266s Reading state information... 266s rng-tools-debian is already the newest version (2.4). 266s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 266s Reading package lists... 266s Building dependency tree... 266s Reading state information... 266s The following packages will be REMOVED: 266s cloud-init* python3-configobj* python3-debconf* 267s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 267s After this operation, 3252 kB disk space will be freed. 267s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71889 files and directories currently installed.) 267s Removing cloud-init (24.1.1-0ubuntu1) ... 267s Removing python3-configobj (5.0.8-3) ... 267s Removing python3-debconf (1.5.86) ... 267s Processing triggers for man-db (2.12.0-3) ... 268s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71500 files and directories currently installed.) 268s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 268s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 268s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 268s invoke-rc.d: policy-rc.d denied execution of try-restart. 269s Reading package lists... 269s Building dependency tree... 269s Reading state information... 269s linux-generic is already the newest version (6.8.0-11.11+1). 269s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 269s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 269s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 269s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 271s Reading package lists... 271s Reading package lists... 272s Building dependency tree... 272s Reading state information... 272s Calculating upgrade... 272s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 272s Reading package lists... 272s Building dependency tree... 272s Reading state information... 273s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 273s autopkgtest [12:48:41]: rebooting testbed after setup commands that affected boot 288s autopkgtest [12:48:56]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP PREEMPT_DYNAMIC Wed Feb 14 00:29:05 UTC 2024 289s autopkgtest [12:48:57]: @@@@@@@@@@@@@@@@@@@@ apt-source bart-cuda 290s Get:1 http://ftpmaster.internal/ubuntu noble/multiverse bart-cuda 0.8.00-2build1 (dsc) [2215 B] 290s Get:2 http://ftpmaster.internal/ubuntu noble/multiverse bart-cuda 0.8.00-2build1 (tar) [879 kB] 290s Get:3 http://ftpmaster.internal/ubuntu noble/multiverse bart-cuda 0.8.00-2build1 (diff) [21.4 kB] 290s gpgv: Signature made Wed Jul 5 21:17:20 2023 UTC 290s gpgv: using RSA key AC483F68DE728F43F2202FCA568D30F321B2133D 290s gpgv: issuer "steve.langasek@ubuntu.com" 290s gpgv: Can't check signature: No public key 290s dpkg-source: warning: cannot verify inline signature for ./bart-cuda_0.8.00-2build1.dsc: no acceptable signature found 290s autopkgtest [12:48:58]: testing package bart-cuda version 0.8.00-2build1 290s autopkgtest [12:48:58]: build not needed 290s autopkgtest [12:48:58]: test command1: preparing testbed 291s Reading package lists... 291s Building dependency tree... 291s Reading state information... 292s Starting pkgProblemResolver with broken count: 0 292s Starting 2 pkgProblemResolver with broken count: 0 292s Done 292s The following additional packages will be installed: 292s bart-cuda libblas3 libcublas12 libcublaslt12 libcudart12 libcufft11 292s libfftw3-single3 libgfortran5 libgomp1 liblapack3 liblapacke libtmglib3 292s Suggested packages: 292s octave-bart libfftw3-bin libfftw3-dev 292s Recommended packages: 292s libnvidia-compute-535 | libnvidia-compute-535-server | libnvidia-compute-525 292s | libnvidia-compute-525-server | libcuda.so.1 | libcuda-12.0-1 292s The following NEW packages will be installed: 292s autopkgtest-satdep bart-cuda libblas3 libcublas12 libcublaslt12 libcudart12 292s libcufft11 libfftw3-single3 libgfortran5 libgomp1 liblapack3 liblapacke 292s libtmglib3 292s 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. 292s Need to get 291 MB/291 MB of archives. 292s After this operation, 790 MB of additional disk space will be used. 292s Get:1 /tmp/autopkgtest.Pon700/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [704 B] 292s Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-3 [238 kB] 292s Get:3 http://ftpmaster.internal/ubuntu noble/multiverse amd64 libcublaslt12 amd64 12.0.2.224~12.0.1-4build1 [189 MB] 295s Get:4 http://ftpmaster.internal/ubuntu noble/multiverse amd64 libcublas12 amd64 12.0.2.224~12.0.1-4build1 [50.1 MB] 296s Get:5 http://ftpmaster.internal/ubuntu noble/multiverse amd64 libcudart12 amd64 12.0.146~12.0.1-4build1 [185 kB] 296s Get:6 http://ftpmaster.internal/ubuntu noble/multiverse amd64 libcufft11 amd64 11.0.1.95~12.0.1-4build1 [44.4 MB] 297s Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240303-1ubuntu1 [147 kB] 297s Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libfftw3-single3 amd64 3.3.10-1ubuntu1 [869 kB] 297s Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240303-1ubuntu1 [924 kB] 297s Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-3 [2649 kB] 297s Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 libtmglib3 amd64 3.12.0-3 [140 kB] 297s Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 liblapacke amd64 3.12.0-3 [412 kB] 297s Get:13 http://ftpmaster.internal/ubuntu noble/multiverse amd64 bart-cuda amd64 0.8.00-2build1 [1012 kB] 297s Fetched 291 MB in 4s (68.8 MB/s) 297s Selecting previously unselected package libblas3:amd64. 297s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71445 files and directories currently installed.) 297s Preparing to unpack .../00-libblas3_3.12.0-3_amd64.deb ... 297s Unpacking libblas3:amd64 (3.12.0-3) ... 297s Selecting previously unselected package libcublaslt12:amd64. 297s Preparing to unpack .../01-libcublaslt12_12.0.2.224~12.0.1-4build1_amd64.deb ... 297s Unpacking libcublaslt12:amd64 (12.0.2.224~12.0.1-4build1) ... 300s Selecting previously unselected package libcublas12:amd64. 300s Preparing to unpack .../02-libcublas12_12.0.2.224~12.0.1-4build1_amd64.deb ... 300s Unpacking libcublas12:amd64 (12.0.2.224~12.0.1-4build1) ... 300s Selecting previously unselected package libcudart12:amd64. 300s Preparing to unpack .../03-libcudart12_12.0.146~12.0.1-4build1_amd64.deb ... 300s Unpacking libcudart12:amd64 (12.0.146~12.0.1-4build1) ... 300s Selecting previously unselected package libcufft11:amd64. 300s Preparing to unpack .../04-libcufft11_11.0.1.95~12.0.1-4build1_amd64.deb ... 300s Unpacking libcufft11:amd64 (11.0.1.95~12.0.1-4build1) ... 301s Selecting previously unselected package libgomp1:amd64. 301s Preparing to unpack .../05-libgomp1_14-20240303-1ubuntu1_amd64.deb ... 301s Unpacking libgomp1:amd64 (14-20240303-1ubuntu1) ... 301s Selecting previously unselected package libfftw3-single3:amd64. 301s Preparing to unpack .../06-libfftw3-single3_3.3.10-1ubuntu1_amd64.deb ... 301s Unpacking libfftw3-single3:amd64 (3.3.10-1ubuntu1) ... 301s Selecting previously unselected package libgfortran5:amd64. 301s Preparing to unpack .../07-libgfortran5_14-20240303-1ubuntu1_amd64.deb ... 301s Unpacking libgfortran5:amd64 (14-20240303-1ubuntu1) ... 301s Selecting previously unselected package liblapack3:amd64. 301s Preparing to unpack .../08-liblapack3_3.12.0-3_amd64.deb ... 301s Unpacking liblapack3:amd64 (3.12.0-3) ... 302s Selecting previously unselected package libtmglib3:amd64. 302s Preparing to unpack .../09-libtmglib3_3.12.0-3_amd64.deb ... 302s Unpacking libtmglib3:amd64 (3.12.0-3) ... 302s Selecting previously unselected package liblapacke:amd64. 302s Preparing to unpack .../10-liblapacke_3.12.0-3_amd64.deb ... 302s Unpacking liblapacke:amd64 (3.12.0-3) ... 302s Selecting previously unselected package bart-cuda. 302s Preparing to unpack .../11-bart-cuda_0.8.00-2build1_amd64.deb ... 302s Unpacking bart-cuda (0.8.00-2build1) ... 302s Selecting previously unselected package autopkgtest-satdep. 302s Preparing to unpack .../12-1-autopkgtest-satdep.deb ... 302s Unpacking autopkgtest-satdep (0) ... 302s Setting up libcudart12:amd64 (12.0.146~12.0.1-4build1) ... 302s Setting up libgomp1:amd64 (14-20240303-1ubuntu1) ... 302s Setting up libblas3:amd64 (3.12.0-3) ... 302s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 302s Setting up libcufft11:amd64 (11.0.1.95~12.0.1-4build1) ... 302s Setting up libgfortran5:amd64 (14-20240303-1ubuntu1) ... 302s Setting up libcublaslt12:amd64 (12.0.2.224~12.0.1-4build1) ... 302s Setting up liblapack3:amd64 (3.12.0-3) ... 302s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 302s Setting up libfftw3-single3:amd64 (3.3.10-1ubuntu1) ... 302s Setting up libcublas12:amd64 (12.0.2.224~12.0.1-4build1) ... 302s Setting up libtmglib3:amd64 (3.12.0-3) ... 302s Setting up liblapacke:amd64 (3.12.0-3) ... 302s Setting up bart-cuda (0.8.00-2build1) ... 302s Setting up autopkgtest-satdep (0) ... 302s Processing triggers for man-db (2.12.0-3) ... 302s Processing triggers for libc-bin (2.39-0ubuntu2) ... 305s (Reading database ... 71533 files and directories currently installed.) 305s Removing autopkgtest-satdep (0) ... 305s autopkgtest [12:49:13]: test command1: /usr/bin/bart version 305s autopkgtest [12:49:13]: test command1: [----------------------- 306s v0.8.00 306s autopkgtest [12:49:14]: test command1: -----------------------] 306s autopkgtest [12:49:14]: test command1: - - - - - - - - - - results - - - - - - - - - - 306s command1 PASS (superficial) 306s autopkgtest [12:49:14]: test suite: preparing testbed 308s Reading package lists... 308s Building dependency tree... 308s Reading state information... 309s Starting pkgProblemResolver with broken count: 0 309s Starting 2 pkgProblemResolver with broken count: 0 309s Done 309s The following NEW packages will be installed: 310s autopkgtest-satdep 310s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 310s Need to get 0 B/712 B of archives. 310s After this operation, 0 B of additional disk space will be used. 310s Get:1 /tmp/autopkgtest.Pon700/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [712 B] 310s Selecting previously unselected package autopkgtest-satdep. 310s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 71533 files and directories currently installed.) 310s Preparing to unpack .../2-autopkgtest-satdep.deb ... 310s Unpacking autopkgtest-satdep (0) ... 310s Setting up autopkgtest-satdep (0) ... 312s (Reading database ... 71533 files and directories currently installed.) 312s Removing autopkgtest-satdep (0) ... 312s autopkgtest [12:49:20]: test suite: [----------------------- 313s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 1 o.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1 o.ra om.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 2 1 p4.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o.ra o.ra p0.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o.ra om.ra p1.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 om.ra om.ra p2.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 om.ra o.ra p3.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 p0.ra p1.ra p0.ra p2.ra p1.ra p3.ra p4.ra p4.ra p3.ra p2.ra p0.ra p4.ra p3.ra p.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 1 o.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0 o.ra o0.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 1 o.ra o1.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2 o.ra o2.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 3 o.ra o3.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 4 o.ra o4.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o0.ra o2.ra o0.ra o3.ra o2.ra o4.ra o1.ra o1.ra o4.ra o3.ra o0.ra o1.ra o4.ra lab.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 0 1 lab.ra lab1.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//bin -l2 lab1.ra p.ra x.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 2 p0.ra p0.ra p0.ra pa.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 2 3 pa.ra paa.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 2 p1.ra p1.ra pb.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 2 3 pb.ra pbb.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 2 p2.ra p2.ra pc.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 2 3 pc.ra pcc.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 2 p3.ra p3.ra p3.ra pd.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 2 3 pd.ra pdd.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 2 p4.ra p4.ra pe.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 2 3 pe.ra pee.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 paa.ra pee.ra pbb.ra pcc.ra pdd.ra comp.ra ;\ 313s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. comp.ra x.ra ;\ 313s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 314s Label binning... 314s 0.000000 314s touch tests/test-bin-label 314s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 1 o1.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2 o1.ra o2.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 3 o1.ra o3.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 4 o1.ra o4.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 5 o1.ra o5.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 6 o1.ra o6.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0 o1.ra o0.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o0.ra o1.ra o2.ra o3.ra o4.ra o5.ra o6.ra o0.ra o1.ra o2.ra o3.ra o4.ra o5.ra o6.ra incr.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o6.ra o5.ra o4.ra o3.ra o2.ra o0.ra o1.ra rand.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o5.ra o6.ra o4.ra o3.ra o2.ra o1.ra o0.ra o5.ra o6.ra o4.ra o3.ra o2.ra o1.ra o0.ra lab.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//bin -o lab.ra rand.ra rand_reorder.ra ;\ 314s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. incr.ra rand_reorder.ra ;\ 314s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 315s Reorder binning... 315s 0.000000 315s touch tests/test-bin-reorder 315s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 1 o1.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0 o1.ra o0.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1 o1.ra om1.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2 o1.ra o2.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 3 o1.ra o3.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 4 o1.ra o4.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 5 o1.ra o5.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o1.ra o1.ra q1.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 om1.ra o1.ra q2.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 om1.ra om1.ra q3.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o1.ra om1.ra q4.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 q2.ra q3.ra q4.ra q1.ra q2.ra qc.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 q1.ra q1.ra q3.ra q3.ra q1.ra qr.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 qr.ra qc.ra q.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 3075 1 1 5 4 q.ra eof.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o1.ra o2.ra o3.ra o4.ra o5.ra k.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 0 10 k.ra k1.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//bin -C4 -R2 eof.ra k1.ra qbin.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o0.ra o0.ra r1c1.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o1.ra o5.ra r1c2.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o2.ra o0.ra r1c3.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o0.ra o0.ra r1c4.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 10 r1c1.ra r1c2.ra r1c3.ra r1c4.ra r1.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o4.ra o0.ra r2c1.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o0.ra o0.ra r2c2.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o0.ra o0.ra r2c3.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o3.ra o0.ra r2c4.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 10 r2c1.ra r2c2.ra r2c3.ra r2c4.ra r2.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 11 r1.ra r2.ra ref.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 0 2 ref.ra ref1.ra ;\ 315s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. ref1.ra qbin.ra ;\ 315s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 316s Quadrature binning... 316s 0.000000 316s touch tests/test-bin-quadrature 316s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 1 o1.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0 o1.ra o0.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1 o1.ra om1.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2 o1.ra o2.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 3 o1.ra o3.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 4 o1.ra o4.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 5 o1.ra o5.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o1.ra o1.ra q1.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 om1.ra o1.ra q2.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 om1.ra om1.ra q3.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o1.ra om1.ra q4.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 q2.ra q3.ra q4.ra q1.ra q2.ra qc.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 q1.ra q1.ra q3.ra q3.ra q1.ra qr.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 qr.ra qc.ra q.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 3075 1 1 5 4 q.ra eof.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o1.ra o2.ra o3.ra o4.ra o5.ra k.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 0 10 k.ra k1.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//bin -C4 -R2 -O 180:-90 eof.ra k1.ra qbin.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o0.ra o0.ra r1c1.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o0.ra o0.ra r1c2.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o3.ra o0.ra r1c3.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o4.ra o0.ra r1c4.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 10 r1c1.ra r1c2.ra r1c3.ra r1c4.ra r1.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o1.ra o5.ra r2c1.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o2.ra o0.ra r2c2.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o0.ra o0.ra r2c3.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o0.ra o0.ra r2c4.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 10 r2c1.ra r2c2.ra r2c3.ra r2c4.ra r2.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 11 r1.ra r2.ra ref.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 0 2 ref.ra ref1.ra ;\ 316s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. ref1.ra qbin.ra ;\ 316s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 317s Quadrature binning... 318s 0.000000 318s touch tests/test-bin-quadrature-offset 318s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 1 o1.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0 o1.ra o0.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1 o1.ra om1.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2 o1.ra o2.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 3 o1.ra o3.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 4 o1.ra o4.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 5 o1.ra o5.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o1.ra o1.ra q1.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 om1.ra o1.ra q2.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 om1.ra om1.ra q3.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o1.ra om1.ra q4.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 om1.ra om1.ra qrm1.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o0.ra o0.ra qr0.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o1.ra o1.ra qr1.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 q2.ra q3.ra q4.ra q1.ra q2.ra qc.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 qr1.ra qrm1.ra qr0.ra qr1.ra qrm1.ra qr.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o1.ra o2.ra o3.ra o4.ra o5.ra k.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 qr.ra qc.ra q.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 3075 1 1 5 4 q.ra eof.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 0 10 k.ra k1.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//bin -C4 -R3 -M eof.ra k1.ra qbin.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 10 o0.ra o5.ra o2.ra o0.ra kb0.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 10 o0.ra o0.ra o0.ra o3.ra kb1.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 10 o4.ra o1.ra o0.ra o0.ra kb2.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 11 kb0.ra kb1.ra kb2.ra kj.ra ;\ 318s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. kj.ra qbin.ra ;\ 318s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 319s Quadrature binning... 320s 0.000000 320s touch tests/test-bin-amplitude 320s set -e ;\ 320s [ 0 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//bitmask` ] &&\ 320s [ 1 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//bitmask 0` ] &&\ 320s [ 1587 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//bitmask 0 1 4 5 9 10` ] &&\ 320s [ 65535 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//bitmask 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15` ] &&\ 320s true 320s touch tests/test-bitmask 320s set -e ;\ 320s [ -z `/tmp/autopkgtest.Pon700/autopkgtest_tmp//bitmask -b 0 | tr -d '\n'` ] &&\ 320s [ "0 " = "`/tmp/autopkgtest.Pon700/autopkgtest_tmp//bitmask -b 1 | tr -d '\n'`" ] &&\ 320s [ "0 1 4 5 9 10 " == "`/tmp/autopkgtest.Pon700/autopkgtest_tmp//bitmask -b 1587 | tr -d '\n'`" ] &&\ 320s [ "0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 " == "`/tmp/autopkgtest.Pon700/autopkgtest_tmp//bitmask -b 65535 | tr -d '\n'`" ] &&\ 320s true 320s touch tests/test-bitmask-reverse 320s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 6 6 o1.ra ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise o1.ra o2.ra ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//casorati 1 2 o2.ra o3.ra ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 7 5 6 2 o3.ra o4.ra ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//avg 4 o4.ra o5.ra ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 0 1 o5.ra o6.ra ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze o6.ra o7.ra ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 1 3 o2.ra i2.ra ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//avg 2 i2.ra i3.ra ;\ 320s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. i3.ra o7.ra ;\ 320s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 321s 0.000000 321s touch tests/test-casorati 321s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra 323s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -S -p 8 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc8.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -S -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc4.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 3 8 ksp-cc4.ra ksp-cc-z.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.1 ksp-cc8.ra ksp-cc-z.ra ;\ 323s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 323s Done. 323s Done. 323s 0.077849 323s touch tests/test-cc-svd 323s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -G -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc4.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 11 ksp-cc4.ra ksp0-cc4.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 11 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp0.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0001 ksp0.ra ksp0-cc4.ra ;\ 323s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 323s Done. 323s 0.000002 323s touch tests/test-cc-geom 323s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -E -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc4.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 3 8 ksp-cc4.ra ksp-cc-z.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 11 ksp-cc4.ra ksp0-cc4.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 11 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp0.ra ;\ 323s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0001 ksp0.ra ksp0-cc4.ra ;\ 323s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 323s WARN: Warning: ECC depends on a parameter choice rule for optimal results which is not implemented. 323s Done. 324s 0.000043 324s touch tests/test-cc-esp 324s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -S -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -M -S /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 4 0 4 sccmat.ra sccmat-4.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -C -s 8 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat-4.ra ksp-cc-3.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 3 4 ksp-cc-3.ra ksp-cc-4.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. ksp-cc.ra ksp-cc-4.ra ;\ 324s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 324s Done. 324s Done. 324s 0.000000 324s touch tests/test-cc-svd-matrix 324s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -S -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -M -S /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ccapply -S -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc-2.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. ksp-cc.ra ksp-cc-2.ra ;\ 324s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 324s Done. 324s Done. 324s Done. 324s 0.000000 324s touch tests/test-ccapply-forward 324s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -M -S /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ccapply -S -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ccapply -S -u ksp-cc.ra sccmat.ra ksp-2.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 4 0 4 sccmat.ra sccmat-4.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 3 4 ksp-cc.ra ksp-ccT.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 16 ksp-ccT.ra sccmat-4.ra ksp-3.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.08 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-2.ra ;\ 324s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. ksp-2.ra ksp-3.ra ;\ 324s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 324s Done. 324s Done. 325s Done. 325s 0.077849 325s 0.000000 325s touch tests/test-ccapply-backward 325s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 325s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -G -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 325s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -M -p 4 -G /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 325s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ccapply -G -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc-2.ra ;\ 325s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 4 0 4 sccmat.ra sccmat-4.ra ;\ 325s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. ksp-cc.ra ksp-cc-2.ra ;\ 325s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 325s Done. 325s Done. 325s Done. 325s 0.000000 325s touch tests/test-ccapply-geom-forward 325s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 325s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -M -p4 -G /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 325s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ccapply -G -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc.ra ;\ 325s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ccapply -G -u ksp-cc.ra sccmat.ra ksp-2.ra ;\ 325s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.008 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-2.ra ;\ 325s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 325s Done. 325s Done. 325s Done. 326s 0.006931 326s touch tests/test-ccapply-geom-backward 326s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -E -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -M -p 4 -E /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ccapply -E -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc-2.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 4 0 4 sccmat.ra sccmat-4.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. ksp-cc.ra ksp-cc-2.ra ;\ 326s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 326s WARN: Warning: ECC depends on a parameter choice rule for optimal results which is not implemented. 326s Done. 326s Done. 326s Done. 326s WARN: Warning: ECC depends on a parameter choice rule for optimal results which is not implemented. 326s 0.000000 326s touch tests/test-ccapply-esp-forward 326s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -M -p4 -E /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ccapply -E -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ccapply -E -u ksp-cc.ra sccmat.ra ksp-2.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.08 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-2.ra ;\ 326s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 326s WARN: Warning: ECC depends on a parameter choice rule for optimal results which is not implemented. 326s Done. 326s Done. 326s Done. 326s 0.011302 326s touch tests/test-ccapply-esp-backward 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra 326s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cdf97 3 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra w.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cdf97 -i 3 w.ra a.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra a.ra ;\ 326s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 326s 0.000001 326s touch tests/test-cdf97 326s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 50 50 a.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//copy a.ra b.ra ;\ 326s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. a.ra b.ra ;\ 326s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 327s 0.000000 327s touch tests/test-copy 327s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 50 50 o.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 o.ra o0.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 50 50 o1.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//copy 0 25 1 25 o0.ra o1.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o1.ra o.ra ;\ 327s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 327s 0.000000 327s touch tests/test-copy-out 327s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 50 50 o.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 o.ra o0.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 100 100 o1.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//copy 0 25 1 25 o.ra o1.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o1.ra o0.ra ;\ 327s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 327s 0.000000 327s touch tests/test-copy-in 327s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ecalib -m1 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra coils.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pocsense -i1 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra coils.ra proj.ra ;\ 327s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 proj.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 327s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 327s Done. 328s Reconstruction... 328s [Iter 0001] Objective: 0.000000, Error: -1.000000 328s Done 328s Done. 328s 0.036856 328s touch tests/test-ecalib 328s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 328s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n 100 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_noise.ra ;\ 328s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ecalib -m 1 -a -v 100 shepplogan_noise.ra coils.ra ;\ 328s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pocsense -i 1 shepplogan_noise.ra coils.ra proj.ra ;\ 328s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.035 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra proj.ra;\ 328s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 328s --------------------------------------------- 328s | CTR1 | CTR2 | Crop | Est. MSE | 328s --------------------------------------------- 328s | 1 | 1 | 0.9900 | 2.992904320000e+08 | 328s | | 2 | 0.8900 | 7.347899000000e+06 | 328s | | 3 | 0.7900 | 7.119982000000e+06 | 328s | | 4 | 0.6900 | 6.962025500000e+06 | 328s | | 5 | 0.5900 | 7.031898500000e+06 | 328s | 2 | 1 | 0.6400 | 7.006852500000e+06 | 328s | | 2 | 0.6900 | 6.962025500000e+06 | 328s | | 3 | 0.7400 | 7.005169000000e+06 | 328s | 3 | 1 | 0.7150 | 6.967062500000e+06 | 328s | | 2 | 0.6900 | 6.962025500000e+06 | 328s | | 3 | 0.6650 | 6.984866000000e+06 | 328s | 4 | 1 | 0.6775 | 6.971261500000e+06 | 328s | | 2 | 0.6900 | 6.962025500000e+06 | 328s | | 3 | 0.7025 | 6.962145500000e+06 | 328s | 5 | 1 | 0.6962 | 6.959736500000e+06 | 328s | | 2 | 0.6900 | 6.962025500000e+06 | 328s | 6 | 1 | 0.6931 | 6.966178000000e+06 | 328s | | 2 | 0.6962 | 6.959736500000e+06 | 328s | | 3 | 0.6994 | 6.964369000000e+06 | 328s | 7 | 1 | 0.6978 | 6.962482000000e+06 | 328s | | 2 | 0.6963 | 6.959736500000e+06 | 328s | | 3 | 0.6947 | 6.963042500000e+06 | 328s | 8 | 1 | 0.6955 | 6.963181500000e+06 | 328s | | 2 | 0.6963 | 6.959736500000e+06 | 328s | | 3 | 0.6970 | 6.961511500000e+06 | 328s | 9 | 1 | 0.6966 | 6.960474000000e+06 | 328s | | 2 | 0.6962 | 6.959736500000e+06 | 328s | | 3 | 0.6959 | 6.960445000000e+06 | 328s | 10 | 1 | 0.6961 | 6.959736500000e+06 | 328s | | 2 | 0.6962 | 6.959736500000e+06 | 328s --------------------------------------------- 328s Done. 328s Reconstruction... 328s [Iter 0001] Objective: 0.000000, Error: -1.000000 328s Done 328s Done. 328s 0.033706 328s touch tests/test-ecalib-auto 328s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 328s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -S -p 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 328s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ecalib -m1 ksp-cc.ra scc-sens.ra ;\ 328s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ecalib -P -m1 ksp-cc.ra scc-sens2.ra ;\ 328s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -s -t 0.000001 scc-sens.ra scc-sens2.ra ;\ 328s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 329s Done. 329s Done. 329s Done. 329s Scaled by: -0.990795+0.135371i 329s 0.000000 329s touch tests/test-ecalib-rotation 329s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 329s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ecalib -m1 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sens.ra ;\ 329s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cc -M -S /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra cc-mat.ra ;\ 329s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -C -s 8 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra cc-mat.ra ksp-cc.ra ;\ 329s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 3 4 ksp-cc.ra ksp-cc-2.ra ;\ 329s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ecalib -P -m1 ksp-cc-2.ra scc-sens-1.ra ;\ 329s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 3 4 scc-sens-1.ra scc-sens-2.ra ;\ 329s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 16 scc-sens-2.ra cc-mat.ra scc-sens.ra ;\ 329s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.1 sens.ra scc-sens.ra ;\ 329s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 329s Done. 329s Done. 330s Done. 330s 0.064473 330s touch tests/test-ecalib-rotation2 330s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q1.5:1:-0.5 -r -y8 t.ra ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -y8 t0.ra ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 t2.ra ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 t.ra t2.ra ;\ 330s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 330s 0.000007 330s touch tests/test-estdelay 330s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q1.5:1.:-0.5 -r -y8 -c t.ra ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -y8 -c t0.ra ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 -c t2.ra ;\ 330s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 330s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 330s WARN: DC is shifted by: 0.000000 [sample], 1 sample = 1.000000 [1/FOV] 330s 0.000008 331s touch tests/test-estdelay-dccen 331s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 331s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -O -q1.5:1:-0.5 -r -y8 t.ra ;\ 331s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -y8 t0.ra ;\ 331s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 331s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -O -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 t2.ra ;\ 331s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0011 t.ra t2.ra ;\ 331s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 332s 0.001042 332s WARN: DC is shifted by: 0.000000 [sample], 1 sample = 1.000000 [1/FOV] 332s touch tests/test-estdelay-transverse 332s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -q0.3:0.1:0.2 -c -y5 t.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -c -r -y5 n.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k -t t.ra k.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay -R n.ra k.ra` -y5 -c t2.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0035 t.ra t2.ra ;\ 332s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 332s 0.002300 332s touch tests/test-estdelay-ring 332s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -G -q0.3:-0.1:0.2 -y5 -o2. -c t.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -G -r -y5 -o2. n.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k -t t.ra k.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -G -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay n.ra k.ra` -y5 -o2. t2.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.004 t.ra t2.ra ;\ 332s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 332s 0.001521 332s touch tests/test-estdelay-coils 332s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q1.5:1:-0.5 -r -y8 -o2. t.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -y8 -o2. t0.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 -o2. t2.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 332s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 332s 0.000005 332s touch tests/test-estdelay-scale 332s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q1.5:1:-0.5 -r -y8 -o2. -c t.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -y8 -o2. -c t0.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 -o2. -c t2.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 332s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 332s WARN: DC is shifted by: 0.000000 [sample], 1 sample = 0.500000 [1/FOV] 332s 0.000002 332s touch tests/test-estdelay-dccen-scale 332s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -q0.3:0.1:0.2 -O -c -y5 -o2. t.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -c -r -y5 -o2. n.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay -R n.ra k.ra` -O -y5 -o2. -c t2.ra ;\ 332s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 332s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 333s WARN: DC is shifted by: 0.000000 [sample], 1 sample = 0.500000 [1/FOV] 333s 0.000026 333s touch tests/test-estdelay-ring-scale 333s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -q0.3:0.1:0.2 -y5 -o2. t.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -y5 -o2. n.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay -R n.ra k.ra` -y5 -o2. t2.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.002 t.ra t2.ra ;\ 333s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 333s WARN: Choose larger region! (-r option) 333s 0.001891 333s touch tests/test-estdelay-ring-uncen 333s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q1.5:1.:-0.5 -r -y8 -x128 t.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -y8 -x128 t0.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 1 128 k.ra kb.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 1 128 t0.ra t0b.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay t0b.ra kb.ra` -r -y8 -x128 t2.ra ;\ 333s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 333s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 334s WARN: odd number of samples 334s WARN: DC is shifted by: 0.500000 [sample], 1 sample = 1.000000 [1/FOV] 334s 0.000019 334s touch tests/test-estdelay-asym 334s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q1.5:1.:-0.5 -r -y8 -c -x128 t.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -r -y8 -c -x128 t0.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 1 128 k.ra kb.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 1 128 t0.ra t0b.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -D -q`/tmp/autopkgtest.Pon700/autopkgtest_tmp//estdelay t0b.ra kb.ra` -r -y8 -c -x128 t2.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 334s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 334s WARN: odd number of samples 334s 0.000015 334s touch tests/test-estdelay-dccen-asym 334s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 1 o.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 o.ra o0.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 1 o0.ra o1.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//estshift 1 o1.ra o1.ra | grep "0.000000" ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//estshift 1 o0.ra o1.ra | grep "1.000000" ;\ 334s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 334s Shifts: 0.000000 334s Shifts: 1.000000 334s touch tests/test-estshift 334s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 o.ra o0.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 45 55 o0.ra o1.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 0 45 55 o1.ra o2.ra ;\ 334s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o2.ra o.ra ;\ 334s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 335s 0.000000 335s touch tests/test-extract 335s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 10 10 10 o.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 2 100 o.ra o0.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 0 45 55 1 45 55 2 45 55 o0.ra o1.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o1.ra o.ra ;\ 335s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 335s 0.000000 335s touch tests/test-extract-multidim 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -S8 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra 335s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp_scaled.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fakeksp /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ksp_scaled.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra out.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.22 ksp_scaled.ra out.ra ;\ 335s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 335s Simulate kspace 335s 0.216102 335s touch tests/test-fakeksp-phantom 335s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp_scaled.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//upat -z2 u.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze u.ra u2.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac ksp_scaled.ra u2.ra ksp_under.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fakeksp -r /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ksp_under.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra out.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac out.ra u2.ra out_pat.ra ;\ 335s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0 ksp_under.ra out_pat.ra ;\ 335s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 335s Replace kspace 336s 0.000000 336s touch tests/test-fakeksp-phantom-replace 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_fft.ra 336s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 16384 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepploganS.ra ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -i 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_fft.ra shepplogan2.ra ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 shepploganS.ra shepplogan2.ra ;\ 336s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 336s 0.000000 336s touch tests/test-fft-basic 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_fftu.ra 336s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u -i 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_fftu.ra shepplogan2u.ra ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan2u.ra ;\ 336s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 336s 0.000000 336s touch tests/test-fft-unitary 336s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fftmod -i 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_fftu.ra shepplogan_fftu2.ra ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -uni 7 shepplogan_fftu2.ra shepplogan2u.ra ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fftmod -i 7 shepplogan2u.ra shepplogan3u.ra ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan3u.ra ;\ 336s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 336s 0.000000 336s touch tests/test-fft-uncentered 336s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//index 2 10 a.ra ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//filter -m2 -l5 a.ra b.ra ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 2 2 8 a.ra c.ra ;\ 336s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. c.ra b.ra ;\ 336s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 337s 0.000000 337s touch tests/test-filter-median 337s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//index 1 10 a.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 0 13 a.ra a0.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 2 11 a0.ra a2.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//filter -m1 -l5 a2.ra b.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 2 8 a2.ra c.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. c.ra b.ra ;\ 337s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 337s 0.000000 337s touch tests/test-filter-median2 337s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 4 2 1 O.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 3 4 2 1 Z.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 O.ra Z.ra O.ra Z.ra j.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 1 2 1 o.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.75 o.ra o75.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 o.ra o5.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.25 o.ra o25.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0 o.ra o0.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 o.ra o75.ra o5.ra o25.ra o0.ra o25.ra o5.ra o75.ra o.ra o75.ra o5.ra o25.ra o0.ra j_syn.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//filter -a 0 -l4 j.ra j_filt.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. j_syn.ra j_filt.ra ;\ 337s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 337s 0.000000 337s touch tests/test-filter-movingavg 337s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 6 1 2 1 3 1 4 a0.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise a0.ra a1.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flatten a1.ra a2.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 63 24 1 1 1 1 1 a1.ra a3.ra ;\ 337s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. a2.ra a3.ra ;\ 337s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 338s 0.000000 338s touch tests/test-flatten 338s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 2 1 3 a0.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise a0.ra a1.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 4 a1.ra a2.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 1 o.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 4 a1.ra o.ra a3.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. a2.ra a3.ra ;\ 338s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 338s 0.000000 338s touch tests/test-fmac-sum 338s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom x.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 x.ra k.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fovshift -s0:0.5:0. k.ra ks.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u -i 7 ks.ra xs.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//circshift 1 64 x.ra xc.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 xc.ra xs.ra ;\ 338s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 338s 0.000005 338s touch tests/test-fovshift 338s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x256 -r -y201 t1.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 t1.ra t.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fovshift -s0:0.1:0. -t t.ra k.ra ks.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -i -t t.ra ks.ra xs.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k k2.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fovshift -s0:0.1:0. k2.ra k2s.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u -i 7 k2s.ra x2s.ra ;\ 338s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.06 x2s.ra xs.ra ;\ 338s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 339s Est. image size: 128x128x1 339s Done. 339s 0.055111 339s touch tests/test-fovshift-nc 339s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 339s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -iu 3 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra c0.ra ;\ 339s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 8 c0.ra r0.ra ;\ 339s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 128 96 o.ra ;\ 339s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 128 32 z.ra ;\ 339s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o.ra z.ra oz.ra ;\ 339s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra oz.ra k1.ra ;\ 339s /tmp/autopkgtest.Pon700/autopkgtest_tmp//homodyne -C 1 .75 k1.ra c1.ra ;\ 339s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 8 c1.ra r1.ra ;\ 339s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.02 r0.ra r1.ra ;\ 339s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 340s 0.015158 340s touch tests/test-homodyne 340s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 128 96 o.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 128 32 z.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o.ra z.ra oz.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra oz.ra k1.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//homodyne -C 1 .75 k1.ra c1.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 8 c1.ra r1.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -iu 3 k1.ra c1.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fftmod 3 c1.ra c1f.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//homodyne -n -I -C 1 .75 c1f.ra c1h.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 8 c1h.ra r2.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 r1.ra r2.ra ;\ 340s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 340s 0.000000 340s touch tests/test-homodyne-fftu 340s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pattern /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra pat.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//itsense 0.001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra pat.ra reco.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 340s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.23 reco2.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 340s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 341s 0.220253 341s touch tests/test-itsense 341s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 341s seq 1 300 | xargs -P 100 -I {} /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 6 1 7 o-{}.ra ;\ 341s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 6 300 7 o1.ra ;\ 341s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 `seq -f "o-%.0f.ra" 1 300` o.ra ;\ 341s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o.ra o1.ra ;\ 341s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 350s 0.000000 350s touch tests/test-join 350s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 6 7 1 o ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 3 6 7 1 z ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 2 o z o j ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join -a 2 z o o ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. j o ;\ 350s rm *.cfl ; rm *.hdr ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 350s WARN: Overwriting file: o 350s 0.000000 350s touch tests/test-join-append 350s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 6 7 1 o ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 3 6 7 1 z ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 2 o z j ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join -a 2 o z x ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. j x ;\ 350s rm *.cfl ; rm *.hdr ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 350s 0.000000 350s touch tests/test-join-append-one 350s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//lrmatrix -s -o y.ra o.ra x.ra ;\ 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -s -t 0.002 o.ra y.ra ;\ 350s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 350s Number of levels: 2 350s Total Time: 0.009314 350s Scaled by: -0.000087+0.000000i 350s 0.001193 350s touch tests/test-lrmatrix 350s set -e ;\ 350s if [ "0.000000e+00" != $(/tmp/autopkgtest.Pon700/autopkgtest_tmp//measure --mse /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra) ] ;\ 350s then \ 350s false ;\ 350s fi 350s touch tests/test-measure-ideal-mse 350s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil.ra 351s set -e ;\ 351s if [ "0.000000e+00" != $(/tmp/autopkgtest.Pon700/autopkgtest_tmp//measure --mse-mag /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil.ra) ] ;\ 351s then \ 351s false ;\ 351s fi 351s touch tests/test-measure-ideal-mse-mag 351s set -e ;\ 351s if [ "1.000000e+00" != $(/tmp/autopkgtest.Pon700/autopkgtest_tmp//measure --ssim /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra) ] ;\ 351s then \ 351s false ;\ 351s fi 351s touch tests/test-measure-ideal-ssim 351s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x16 -c circ.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -G -n8 -1 3:3:1 -2 0.02:0.02:1 signal_p1.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 5 1 8 signal_p1.ra signal.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac circ.ra signal.ra echoes.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//index 5 8 tmp1.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 1.6 tmp1.ra tmp2.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 5 1 8 tmp2.ra TE.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//mobafit -G -m3 TE.ra echoes.ra reco.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 1 reco.ra R2S.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x16 -c circ.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac R2S.ra circ.ra masked.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 0.05 circ.ra ref.ra ;\ 351s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 ref.ra masked.ra ;\ 351s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 351s Spoke Averaging: 1 352s 0.000002 352s touch tests/test-mobafit-r2s 352s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x16 -c circ.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -G --fat -n8 -1 3:3:1 -2 0.02:0.02:1 signal_p1.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 5 1 8 signal_p1.ra signal.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac circ.ra signal.ra echoes.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//index 5 8 tmp1.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 1.6 tmp1.ra tmp2.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 5 1 8 tmp2.ra TE.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//mobafit -G -m1 TE.ra echoes.ra reco.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 0 reco.ra W.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 1 reco.ra F.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 2 reco.ra R2S.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 3 reco.ra fB0.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy 1 W.ra F.ra temp_inphase.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs temp_inphase.ra temp_inphase_abs.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 16 16 ones.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy 0.000001 ones.ra temp_inphase_abs.ra temp_wf.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//spow -- -1. temp_wf.ra temp_deno.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs F.ra temp_F_abs.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac temp_F_abs.ra temp_deno.ra fatfrac.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x16 -c circ.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac fatfrac.ra circ.ra fatfrac_masked.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 0.2 circ.ra fatfrac_ref.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 fatfrac_ref.ra fatfrac_masked.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac R2S.ra circ.ra R2S_masked.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 0.05 circ.ra R2S_ref.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 R2S_ref.ra R2S_masked.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac fB0.ra circ.ra fB0_masked.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 0.02 circ.ra fB0_ref.ra ;\ 352s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 fB0_ref.ra fB0_masked.ra ;\ 352s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 352s Spoke Averaging: 1 355s 0.000001 355s 0.000001 356s 0.000001 356s touch tests/test-mobafit-wfr2s 356s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x32 -T -b tubes.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -250:160:11 -T -e10 -n16 sig.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 192 11 1 sig.ra sig2.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 64 tubes.ra sig2.ra x.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//index 5 16 te.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//mobafit -T te.ra x.ra fit.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 0 fit.ra x0.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 1 fit.ra x1.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x32 -T r0.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 r0.ra x0.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//index 6 16 t2.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 6 5 16 t2.ra t2b.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//invert t2b.ra r2.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 64 tubes.ra r2.ra r1.ra ;\ 356s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 r1.ra x1.ra ;\ 356s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s Spoke Averaging: 1 356s 0.000000 357s 0.000000 357s touch tests/test-mobafit-r2 357s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 7 3 5 1 1 2 1 5 o.ra ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//multicfl /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra o.ra comb ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//multicfl -s comb sc sck o2 ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil.ra sc ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sck ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o.ra o2 ;\ 357s rm *.ra ; rm *.cfl; rm *.hdr ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 357s 0.000000 357s 0.000000 357s 0.000000 357s touch tests/test-multicfl 357s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra r.ra c.ra ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//normalize 8 c.ra c_norm.ra ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pocsense -i1 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra c_norm.ra proj.ra ;\ 357s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 proj.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 357s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 357s Scaling: 0.002674 358s Reconstruction... 358s [Iter 0001] Objective: 0.000000, Error: -1.000000 358s Done 358s Done. 358s 0.033635 358s touch tests/test-nlinv 358s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 358s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 13 4 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp.ra ;\ 358s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft 8192 ksp.ra ksp2.ra ;\ 358s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra r.ra ;\ 358s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv ksp2.ra r2.ra ;\ 358s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 13 4 r.ra r3.ra ;\ 358s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2. r2.ra r4.ra ;\ 358s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -s -t 0.1 r3.ra r4.ra ;\ 358s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 358s Scaling: 0.002674 359s SMS-NLINV reconstruction. Multiband factor: 4 359s Scaling: 0.001337 362s Scaled by: 1.002284-0.016617i 362s 0.081792 362s touch tests/test-nlinv-sms 362s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 362s /tmp/autopkgtest.Pon700/autopkgtest_tmp//conj /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra kc.ra ;\ 362s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 6 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra kc.ra ksp.ra ;\ 362s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -N -S ksp.ra r.ra c.ra ;\ 362s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac r.ra c.ra x.ra ;\ 362s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 x.ra ksp2.ra ;\ 362s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 ksp.ra ksp2.ra ;\ 362s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 363s Scaling: 0.001891 364s 0.044559 364s touch tests/test-nlinv-batch 364s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 364s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 7 2 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp.ra ;\ 364s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -s128 -N -S ksp.ra r.ra c.ra ;\ 364s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac r.ra c.ra x.ra ;\ 364s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 x.ra ksp2.ra ;\ 364s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 ksp.ra ksp2.ra ;\ 364s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 364s Scaling: 0.001891 366s 0.036258 366s touch tests/test-nlinv-batch2 366s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 366s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y21 traj.ra ;\ 366s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 366s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 366s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -N -S -i9 -t traj2.ra ksp.ra r.ra c.ra ;\ 366s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 128 1 128 c.ra c2.ra ;\ 366s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac r.ra c2.ra x.ra ;\ 366s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft traj2.ra x.ra k2.ra ;\ 366s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 ksp.ra k2.ra ;\ 366s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 367s Est. image size: 128 128 1 367s Scaling: 0.000139 376s Done. 376s 0.036389 377s touch tests/test-nlinv-noncart 377s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y55 traj.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 1 256 55 o.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a traj.ra o.ra psf.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a traj.ra ksp.ra _adj.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2 _adj.ra adj.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 psf.ra mtf.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 adj.ra ksp2.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 4. mtf.ra mtf2.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -w1. -n -N -i7 -p mtf2.ra ksp2.ra r1.ra c1.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -w1. -N -i7 -t traj2.ra ksp.ra r2.ra c2.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 r2.ra r1.ra ;\ 377s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 c2.ra c1.ra ;\ 377s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 379s Est. image size: 256x256x1 379s Done. 379s Est. image size: 256x256x1 379s Done. 379s Scaling: 1.000000 381s Est. image size: 128 128 1 382s Scaling: 1.000000 384s 0.000000 384s 0.000000 384s touch tests/test-nlinv-precomp 384s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 384s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s1 -k ksp.ra ;\ 384s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -m4 -S -i1 ksp.ra r.ra c.ra ;\ 384s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -m4 -U -S -i1 ksp.ra rU.ra cU.ra ;\ 384s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -m4 -N -S -i1 ksp.ra rN.ra cN.ra ;\ 384s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -m4 -N -U -S -i1 ksp.ra rNU.ra cNU.ra ;\ 384s [ 1 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 r.ra` ] &&\ 384s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 c.ra` ] &&\ 384s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 rU.ra` ] &&\ 384s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 cU.ra` ] &&\ 384s [ 1 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 rN.ra` ] &&\ 384s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 cN.ra` ] &&\ 384s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 rNU.ra` ] &&\ 384s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 cNU.ra` ] &&\ 384s true 384s Scaling: 407.373291 384s Scaling: 407.373291 384s Scaling: 407.373291 384s Scaling: 407.373291 385s touch tests/test-nlinv-maps-dims 385s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 385s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -y21 traj.ra ;\ 385s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s1 -k -ttraj.ra ksp.ra ;\ 385s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -m4 -S -i1 -ttraj.ra ksp.ra r.ra c.ra ;\ 385s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -m4 -U -S -i1 -ttraj.ra ksp.ra rU.ra cU.ra ;\ 385s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -m4 -N -S -i1 -ttraj.ra ksp.ra rN.ra cN.ra ;\ 385s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -m4 -N -U -S -i1 -ttraj.ra ksp.ra rNU.ra cNU.ra ;\ 385s [ 1 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 r.ra` ] &&\ 385s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 c.ra` ] &&\ 385s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 rU.ra` ] &&\ 385s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 cU.ra` ] &&\ 385s [ 1 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 rN.ra` ] &&\ 385s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 cN.ra` ] &&\ 385s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 rNU.ra` ] &&\ 385s [ 4 -eq `/tmp/autopkgtest.Pon700/autopkgtest_tmp//show -d 4 cNU.ra` ] &&\ 385s true 385s Est. image size: 128 128 1 385s Scaling: 30.556381 385s Est. image size: 128 128 1 386s Scaling: 30.556381 386s Est. image size: 128 128 1 386s Scaling: 30.556381 386s Est. image size: 128 128 1 386s Scaling: 30.556381 387s touch tests/test-nlinv-noncart-maps-dims 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_ksp.ra 387s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 128 56 z.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 128 72 o.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 o.ra z.ra pat.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac pat.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_ksp.ra pu.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -i10 -c -p pat.ra pu.ra nl.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 7 pat.ra tmp1.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//circshift 1 1 tmp1.ra pat_conj.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 3 pat.ra pat_conj.ra pat_vcc.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 7 pu.ra tmp2.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//circshift 1 1 tmp2.ra tmp3.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//circshift 0 1 tmp3.ra tmp4.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//conj tmp4.ra pu_conj.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 3 pu.ra pu_conj.ra pu_vcc.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -i10 -P -ppat_vcc.ra pu_vcc.ra nl_vcc.ra ;\ 387s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 nl.ra nl_vcc.ra ;\ 387s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 387s Scaling: 440.974426 388s Scaling: 311.816010 388s 0.000002 388s touch tests/test-nlinv-pf-vcc 388s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 388s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y21 traj.ra ;\ 388s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 388s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 388s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -N -S -i8 -t traj2.ra ksp.ra r.ra c.ra ;\ 388s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 128 1 128 c.ra c2.ra ;\ 388s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -r0.01 -S -t traj2.ra ksp.ra c2.ra x2.ra ;\ 388s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 x2.ra r.ra ;\ 388s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 389s Est. image size: 128 128 1 389s Scaling: 0.000139 396s [ 1 256 21 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 396s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 397s l2 regularization: 0.010000 397s Regularization terms: 1, Supporting variables: 0 397s conjugate gradients 397s Total Time: 0.417071 397s 0.031158 397s touch tests/test-nlinv-pics 397s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 100 100 z.ra ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s1 -n1. z.ra n.ra ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//std 3 n.ra d.ra ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 1 o.ra ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.02 o.ra d.ra ;\ 397s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 397s 0.012457 397s touch tests/test-noise 397s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 100 100 z.ra ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s1 -n1. -r z.ra n.ra ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//std 3 n.ra d.ra ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 1 o.ra ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.02 o.ra d.ra ;\ 397s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 397s 0.019487 397s touch tests/test-noise-real 397s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2.i /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_sc.ra ;\ 397s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -s -t 0.0000001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_sc.ra ;\ 397s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 398s Scaled by: 0.000000+2.000000i 398s 0.000000 398s touch tests/test-nrmse-scale 398s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x128 -y128 traj.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -P traj.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_ksp2.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 7 128 128 1 shepplogan_ksp2.ra shepplogan_ksp3.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0015 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_fftu.ra shepplogan_ksp3.ra ;\ 398s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 398s Done. 398s 0.001412 398s touch tests/test-nufft-forward 398s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 3 128 128 1 z.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s123 z.ra n1.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s321 z.ra n2b.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 7 1 128 128 n2b.ra n2.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft traj.ra n1.ra k.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a traj.ra n2.ra x.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -C -s7 n1.ra x.ra s1.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -C -s7 k.ra n2.ra s2.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 s1.ra s2.ra ;\ 398s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 398s Done. 398s Est. image size: 128x128x1 398s Done. 398s 0.000004 398s touch tests/test-nufft-adjoint 398s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y201 traj.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -r -i traj2.ra ksp.ra reco.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft traj2.ra reco.ra k2.ra ;\ 398s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.001 ksp.ra k2.ra ;\ 398s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 399s Est. image size: 128x128x1 401s Done. 401s Done. 401s 0.000402 401s touch tests/test-nufft-inverse 401s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 401s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 401s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t traj.ra ksp.ra ;\ 401s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -P -l1. -i -r traj.ra ksp.ra reco1.ra ;\ 401s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -P -l1. -i -t traj.ra ksp.ra reco2.ra ;\ 401s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0015 reco1.ra reco2.ra ;\ 401s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 401s Est. image size: 128x128x1 402s Done. 402s Est. image size: 128x128x1 402s Done. 402s 0.001254 402s touch tests/test-nufft-toeplitz 402s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 402s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x128 -y12 traj.ra ;\ 402s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -P traj.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_ksp1.ra ;\ 402s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -s traj.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_ksp2.ra ;\ 402s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. shepplogan_ksp1.ra shepplogan_ksp3.ra ;\ 402s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -s -t 0.00008 shepplogan_ksp2.ra shepplogan_ksp3.ra ;\ 402s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0015 shepplogan_ksp2.ra shepplogan_ksp3.ra ;\ 402s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 402s Done. 405s Done. 405s Scaled by: 1.001314+0.000000i 405s 0.000046 405s 0.001315 405s touch tests/test-nufft-nudft 405s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 405s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x128 -y128 traj.ra ;\ 405s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -s traj.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_ksp2.ra ;\ 405s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 7 128 128 1 shepplogan_ksp2.ra shepplogan_ksp3.ra ;\ 405s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_fft.ra shepplogan_ksp3.ra ;\ 405s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 434s Done. 434s 0.000027 434s touch tests/test-nudft-forward 434s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 3 64 64 1 z.ra ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s123 z.ra n1.ra ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s321 z.ra n2b.ra ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 7 1 64 64 n2b.ra n2.ra ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x64 -y64 traj.ra ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -s traj.ra n1.ra k.ra ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -s -a traj.ra n2.ra x.ra ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -C -s7 n1.ra x.ra s1.ra ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -C -s7 k.ra n2.ra s2.ra ;\ 434s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 s1.ra s2.ra ;\ 434s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 436s Done. 436s Est. image size: 64x64x1 438s Done. 438s 0.000002 438s touch tests/test-nudft-adjoint 438s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -y55 t.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 1 t.ra w.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 0 32 t.ra t0.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 32 64 t.ra t1.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 64 96 t.ra t2.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 96 128 t.ra t3.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t t.ra -k k.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac k.ra w.ra kw.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 0 32 kw.ra k0.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 32 64 kw.ra k1.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 64 96 kw.ra k2.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 96 128 kw.ra k3.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -d128:128:1 -a t0.ra k0.ra x0.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -d128:128:1 -a t1.ra k1.ra x1.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -d128:128:1 -a t2.ra k2.ra x2.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -d128:128:1 -a t3.ra k3.ra x3.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- 1. x0.ra x1.ra xa.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- 1. x2.ra x3.ra xb.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- 1. xa.ra xb.ra x.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -d128:128:1 -a t.ra kw.ra r.ra ;\ 438s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 r.ra x.ra ;\ 438s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 439s Done. 439s Done. 439s Done. 439s Done. 439s Done. 440s 0.000000 440s touch tests/test-nufft-adj-lin 440s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x64 -y11 traj.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t traj.ra ksp.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -i -r traj.ra ksp.ra reco.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 3 2 ksp.ra ksp2.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -i -r traj.ra ksp2.ra reco2.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 3 2 reco.ra reco1.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0015 reco1.ra reco2.ra ;\ 440s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 440s Est. image size: 64x64x1 440s Done. 440s Est. image size: 64x64x1 440s Done. 440s 0.000482 440s touch tests/test-nufft-batch 440s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom img.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 256 1 256 img.ra img2.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -r traj.ra img.ra ksp1.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -1 -r traj.ra img2.ra ksp2.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 ksp1.ra ksp2.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a traj.ra ksp1.ra reco1.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a -1 -r traj.ra ksp1.ra reco2a.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 128 1 128 reco2a.ra reco2.ra ;\ 440s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 reco1.ra reco2.ra ;\ 440s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 440s Done. 440s Done. 441s 0.000000 441s Est. image size: 128x128x1 441s Done. 441s Est. image size: 128x128x1 441s Done. 441s 0.000000 441s touch tests/test-nufft-over 441s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 4 1 128 128 3 z.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s321 z.ra n2.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a traj.ra n2.ra x1.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft --lowmem -a traj.ra n2.ra x2.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 x1.ra x2.ra ;\ 441s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 441s Est. image size: 128x128x1 441s Done. 441s Est. image size: 128x128x1 441s Done. 441s 0.000000 441s touch tests/test-nufft-lowmem-adjoint 441s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y201 traj.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -m5 -r -i traj2.ra ksp.ra reco1.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -m5 --lowmem -r -i traj2.ra ksp.ra reco2.ra ;\ 441s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00006 reco1.ra reco2.ra ;\ 441s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 442s Est. image size: 128x128x1 442s Done. 442s Est. image size: 128x128x1 442s Done. 442s 0.000034 442s touch tests/test-nufft-lowmem-inverse 442s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 442s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -i 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_ksp.ra shepplogan_img.ra ;\ 442s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.22 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_img.ra ;\ 442s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 442s 0.218492 442s touch tests/test-phantom-ksp 442s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 442s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj traj.ra ;\ 442s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t traj.ra shepplogan_ksp2.ra ;\ 442s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 7 128 128 1 shepplogan_ksp2.ra shepplogan_ksp3.ra ;\ 442s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_ksp.ra shepplogan_ksp3.ra ;\ 442s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 443s 0.000000 443s touch tests/test-phantom-noncart 443s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 443s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra sl_coil2.ra ;\ 443s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil.ra sl_coil2.ra ;\ 443s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 443s 0.000000 443s touch tests/test-phantom-coil 443s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 443s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -i 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_cimg.ra ;\ 443s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.22 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil.ra shepplogan_cimg.ra ;\ 443s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 443s 0.214262 443s touch tests/test-phantom-ksp-coil 443s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 443s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -B -k k.ra ;\ 443s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -i 3 k.ra x.ra ;\ 443s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -B r.ra ;\ 443s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.21 r.ra x.ra ;\ 443s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 444s 0.207740 444s touch tests/test-phantom-bart 444s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -T -k k0.ra ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -T -b -k k1.ra ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. k0.ra k2.ra ;\ 444s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 444s 0.000000 444s touch tests/test-phantom-basis 444s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -N 5 -k k0.ra ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -N 5 -b -k k1.ra ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. k0.ra k2.ra ;\ 444s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 444s 0.000000 444s touch tests/test-phantom-random-tubes 444s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom --NIST -k k.ra ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -i 3 k.ra x.ra ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom --NIST r.ra ;\ 444s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.14 r.ra x.ra ;\ 444s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 445s 0.126186 445s touch tests/test-phantom-NIST 445s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom --NIST -k k0.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom --NIST -b 11 -k k1.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 k0.ra k2.ra ;\ 445s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 445s 0.000000 445s touch tests/test-phantom-NIST-basis 445s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -T o.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -T --rotation-angle 180 r.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 445s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 445s 0.000000 445s touch tests/test-phantom-rotation-tubes 445s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -k -T o.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -k -T --rotation-angle 180 r.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 445s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 445s 0.000000 445s touch tests/test-phantom-rotation-tubes-kspace 445s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -b -T o.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -b -T --rotation-angle 180 r.ra ;\ 445s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 445s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 446s 0.000000 446s touch tests/test-phantom-rotation-tubes-basis 446s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --NIST o.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --NIST --rotation-angle 180 r.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 446s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 446s 0.000000 446s touch tests/test-phantom-rotation-NIST 446s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --NIST -k o.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --NIST -k --rotation-angle 180 r.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 446s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 446s 0.000000 446s touch tests/test-phantom-rotation-NIST-kspace 446s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --NIST -b o.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --NIST -b --rotation-angle 180 r.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 446s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 446s 0.000000 446s touch tests/test-phantom-rotation-NIST-basis 446s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -T --rotation-steps 4 --rotation-angle 90 o.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 446s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 446s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 447s 0.000000 447s touch tests/test-phantom-rotation-tubes-multistep 447s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -k -T --rotation-steps 4 --rotation-angle 90 o.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 447s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 447s 0.000000 447s touch tests/test-phantom-rotation-tubes-kspace-multistep 447s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -k -T k.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -k -b -T --rotation-steps 4 --rotation-angle 90 k2.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 64 k2.ra o.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 1 o.ra o2.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 k.ra kf.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 kf.ra o2.ra ;\ 447s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 447s 0.000000 447s touch tests/test-phantom-rotation-tubes-basis-multistep 447s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --NIST --rotation-steps 4 --rotation-angle 90 o.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 447s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 447s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 448s 0.000000 448s touch tests/test-phantom-rotation-NIST-multistep 448s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -k --NIST --rotation-steps 4 --rotation-angle 90 o.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 448s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 448s 0.000000 448s touch tests/test-phantom-rotation-NIST-kspace-multistep 448s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -k --NIST k.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 -k -b --NIST --rotation-steps 4 --rotation-angle 90 k2.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 64 k2.ra o.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 1 o.ra o2.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 k.ra kf.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 kf.ra o2.ra ;\ 448s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 448s 0.000000 448s touch tests/test-phantom-rotation-NIST-basis-multistep 448s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom --SONAR -k k.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -i 3 k.ra x.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom --SONAR r.ra ;\ 448s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.14 r.ra x.ra ;\ 448s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 449s 0.127773 449s touch tests/test-phantom-SONAR 449s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom --SONAR -k k0.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom --SONAR -b 11 -k k1.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 k0.ra k2.ra ;\ 449s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 449s 0.000000 449s touch tests/test-phantom-SONAR-basis 449s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --SONAR o.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --SONAR --rotation-angle 180 r.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 449s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 449s 0.000000 449s touch tests/test-phantom-rotation-SONAR 449s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x 21 --SONAR --rotation-steps 4 --rotation-angle 90 o.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 449s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 449s 0.000000 449s touch tests/test-phantom-rotation-SONAR-multistep 449s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -r0.001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 449s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.23 reco2.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 449s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 449s Size: 16384 Samples: 16384 Acc: 1.00 449s l2 regularization: 0.001000 449s Regularization terms: 1, Supporting variables: 0 449s conjugate gradients 450s Total Time: 0.137487 450s 0.220259 450s touch tests/test-pics-pi 450s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y64 traj.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -r0.001 -t traj2.ra ksp.ra o.ra reco.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft traj2.ra reco.ra k2.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.002 ksp.ra k2.ra ;\ 450s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 450s [ 1 256 64 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 450s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 450s l2 regularization: 0.001000 450s Regularization terms: 1, Supporting variables: 0 450s conjugate gradients 450s Total Time: 0.145627 450s Done. 450s 0.001542 450s touch tests/test-pics-noncart 450s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y48 traj.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -RT:7:0:0.001 -u0.1 -e -t traj2.ra ksp.ra o.ra reco.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 450s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.22 reco2.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 450s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 451s [ 1 256 48 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 451s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 451s Maximum eigenvalue: 9.28e+01 451s TV regularization: 0.001000 451s Regularization terms: 1, Supporting variables: 0 451s ADMM 451s Total Time: 0.200982 451s 0.205945 451s touch tests/test-pics-cs 451s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 451s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y32 traj.ra ;\ 451s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 451s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -t traj2.ra ksp.ra ;\ 451s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -RT:7:0:0.001 -u1000000000. -e -t traj2.ra ksp.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco.ra ;\ 451s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 451s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.22 reco2.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 451s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 452s [ 1 256 32 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 452s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 453s Maximum eigenvalue: 1.00e+12 453s TV regularization: 0.001000 453s Regularization terms: 1, Supporting variables: 0 453s ADMM 453s Total Time: 0.914699 453s 0.219177 453s touch tests/test-pics-pics 453s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 453s /tmp/autopkgtest.Pon700/autopkgtest_tmp//poisson -Y128 -Z128 -y1.2 -z1.2 -e -v -C24 p.ra ;\ 453s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze p.ra p2.ra ;\ 453s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ksp1.ra ;\ 453s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac ksp1.ra p2.ra ksp.ra ;\ 453s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 453s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -RW:3:0:0.01 -i50 ksp.ra o.ra reco.ra ;\ 453s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.22 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra reco.ra ;\ 453s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 454s points: 2225, grid size: 128x128x(pi/4) = 12867 (R = 5.783355) 454s Size: 16384 Samples: 2216 Acc: 7.39 454s l1-wavelet regularization: 0.010000 454s Regularization terms: 1, Supporting variables: 0 454s FISTA 455s Total Time: 0.131455 455s 0.203429 455s touch tests/test-pics-poisson-wavl1 455s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 455s /tmp/autopkgtest.Pon700/autopkgtest_tmp//poisson -Y128 -Z128 -y1.1 -z1.1 -e -v -C24 -T2 p.ra ;\ 455s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 63 128 128 1 1 1 2 p.ra p2.ra ;\ 455s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ksp1.ra ;\ 455s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac ksp1.ra p2.ra ksp.ra ;\ 455s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 455s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -RW:3:32:0.02 -i50 ksp.ra o.ra reco2.ra ;\ 455s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 0 reco2.ra reco.ra ;\ 455s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.22 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra reco.ra ;\ 455s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 457s points: 3713, classes: 2, grid size: 128x128x(pi/4) = 12867 (R = 6.931303) 457s Size: 32768 Samples: 3695 Acc: 8.87 457s l1-wavelet regularization: 0.020000 457s Regularization terms: 1, Supporting variables: 0 457s FISTA 458s Total Time: 0.251058 458s 0.212444 458s touch tests/test-pics-joint-wavl1 458s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 50 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra shepp.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 shepp.ra ksp1.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s 1 -n 1 ksp1.ra ksp2.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//upat -Y 128 -Z 128 -y 2 -z 2 pat.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze pat.ra pat.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac ksp2.ra pat.ra ksp3.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -a -P 64 -w1. -n -RW:3:0:1. -i50 ksp3.ra o.ra reco.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -m -P 64 -w1. -n -RW:3:0:1. -i100 -u .5 ksp3.ra o.ra reco2.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 3 reco.ra kreco.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- -1 kreco.ra ksp3.ra ereco.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac ereco.ra pat.ra preco.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -C -s 3 preco.ra preco.ra e.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 3 reco2.ra kreco2.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- -1 kreco2.ra ksp3.ra ereco2.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac ereco2.ra pat.ra preco2.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -C -s 3 preco2.ra preco2.ra e2.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//vec 4096 f.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t .001 f.ra e.ra ;\ 458s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t .001 f.ra e2.ra ;\ 458s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 458s Basis Pursuit formulation 458s Size: 16384 Samples: 4096 Acc: 4.00 458s l1-wavelet regularization: 1.000000 458s Regularization terms: 2, Supporting variables: 0 458s Primal Dual 458s Total Time: 0.137571 458s Basis Pursuit formulation 458s Size: 16384 Samples: 4096 Acc: 4.00 458s l1-wavelet regularization: 1.000000 458s Regularization terms: 2, Supporting variables: 0 458s ADMM 459s Total Time: 0.330404 459s 0.000169 459s 0.000561 459s touch tests/test-pics-bpwavl1 459s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 459s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 128 128 weights.ra ;\ 459s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 weights.ra weights2.ra ;\ 459s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -r0.001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco1.ra ;\ 459s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -r0.001 -p weights2.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco2.ra ;\ 459s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 reco2.ra reco1.ra ;\ 459s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 460s Size: 16384 Samples: 16384 Acc: 1.00 460s l2 regularization: 0.001000 460s Regularization terms: 1, Supporting variables: 0 460s conjugate gradients 460s Total Time: 0.184293 460s Size: 16384 Samples: 4096 Acc: 4.00 460s l2 regularization: 0.001000 460s Regularization terms: 1, Supporting variables: 0 460s conjugate gradients 460s Total Time: 0.164417 460s 0.000000 460s touch tests/test-pics-weights 460s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 460s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y32 traj.ra ;\ 460s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 460s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -t traj2.ra ksp.ra ;\ 460s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 4 1 256 32 1 weights.ra ;\ 460s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 weights.ra weights2.ra ;\ 460s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -r0.001 -p weights2.ra -t traj2.ra ksp.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco1.ra ;\ 460s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -r0.001 -t traj2.ra ksp.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco2.ra ;\ 460s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.010 reco1.ra reco2.ra ;\ 460s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 461s [ 1 256 32 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 461s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 461s l2 regularization: 0.001000 461s Regularization terms: 1, Supporting variables: 0 461s conjugate gradients 462s Total Time: 0.490699 462s [ 1 256 32 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 462s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 462s l2 regularization: 0.001000 462s Regularization terms: 1, Supporting variables: 0 462s conjugate gradients 462s Total Time: 0.479194 462s 0.003160 462s touch tests/test-pics-noncart-weights 462s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 462s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 462s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -i0 -Wo.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco.ra ;\ 462s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o.ra reco.ra ;\ 462s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 463s Size: 16384 Samples: 16384 Acc: 1.00 463s Regularization terms: 0, Supporting variables: 0 463s conjugate gradients 463s Total Time: 0.046376 463s 0.000000 463s touch tests/test-pics-warmstart 463s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 463s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 5 32 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra kspaces.ra ;\ 463s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -r0.01 -L32 kspaces.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco1.ra ;\ 463s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -r0.01 kspaces.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco2.ra ;\ 463s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. reco1.ra reco2.ra ;\ 463s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 463s Size: 524288 Samples: 524287 Acc: 1.00 463s l2 regularization: 0.010000 463s Regularization terms: 1, Supporting variables: 0 463s conjugate gradients 464s Total Time: 1.395855 464s Size: 524288 Samples: 524287 Acc: 1.00 464s l2 regularization: 0.010000 464s Regularization terms: 1, Supporting variables: 0 464s conjugate gradients 468s Total Time: 4.213714 469s 0.000000 469s touch tests/test-pics-batch 469s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 469s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s4 -m coils.ra ;\ 469s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -m img.ra ;\ 469s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac img.ra coils.ra cimg.ra ;\ 469s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 cimg.ra ksp.ra ;\ 469s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -i10 -w 1. -m ksp.ra coils.ra reco.ra ;\ 469s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.01 img.ra reco.ra ;\ 469s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 470s Size: 524288 Samples: 524287 Acc: 1.00 470s Regularization terms: 0, Supporting variables: 0 470s ADMM 472s Total Time: 1.163800 472s 0.004186 472s touch tests/test-pics-tedim 472s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 472s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y64 traj.ra ;\ 472s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 472s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 472s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 472s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -e -S -RW:3:0:0.0001 -t traj2.ra ksp.ra o.ra reco1.ra ;\ 472s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -e -a -P0.1 -S -RW:3:0:0.0001 -t traj2.ra ksp.ra o.ra reco2.ra ;\ 472s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.09 reco1.ra reco2.ra ;\ 472s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 472s [ 1 256 64 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 472s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 472s Maximum eigenvalue: 1.24e+02 472s l1-wavelet regularization: 0.000100 472s Regularization terms: 1, Supporting variables: 0 472s FISTA 472s Total Time: 0.195485 472s Basis Pursuit formulation 472s [ 1 256 64 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 472s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 473s Maximum eigenvalue: 1.24e+02 473s l1-wavelet regularization: 0.000100 473s Regularization terms: 2, Supporting variables: 0 473s Primal Dual 473s Total Time: 1.016156 473s 0.081177 473s touch tests/test-pics-bp-noncart 473s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 473s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra gold.ra ;\ 473s /tmp/autopkgtest.Pon700/autopkgtest_tmp//delta 16 33 128 p.ra ;\ 473s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra p.ra pk.ra ;\ 473s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 6 1 1 1 1 1 128 o.ra ;\ 473s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 6 2 o.ra o2.ra ;\ 473s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -Bo2.ra pk.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra reco.ra ;\ 473s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2. reco.ra reco2.ra ;\ 473s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 0 reco2.ra reco20.ra ;\ 473s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 gold.ra reco20.ra ;\ 473s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 473s Size: 16384 Samples: 16384 Acc: 1.00 473s Regularization terms: 0, Supporting variables: 0 473s conjugate gradients 473s Total Time: 0.150167 474s Basis: [128 128 1 8 1 128 2 1 1 1 1 1 1 1 1 1 ] 474s Max: [128 128 1 8 1 1 2 1 1 1 1 1 1 1 1 1 ] 474s Size: 2097152 Samples: 16384 Acc: 128.00 474s Regularization terms: 0, Supporting variables: 0 474s conjugate gradients 496s Total Time: 22.214814 496s 0.000000 496s touch tests/test-pics-basis 496s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -D -y31 traj.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//delta 16 36 31 p.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac ksp.ra p.ra pk.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 1 256 p.ra p2.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 6 1 1 1 1 1 31 o.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 6 2 o.ra o2.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 coils.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -r0.001 -t traj2.ra -pp2.ra -Bo2.ra pk.ra coils.ra reco1.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -r0.001 -t traj2.ra ksp.ra coils.ra reco.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2. reco1.ra reco2.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 0 reco2.ra reco20.ra ;\ 496s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.002 reco.ra reco20.ra ;\ 496s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 497s Basis: [128 128 1 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 497s Max: [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 497s [ 1 256 31 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 497s [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 497s l2 regularization: 0.001000 497s Regularization terms: 1, Supporting variables: 0 497s conjugate gradients 498s Total Time: 0.745963 498s [ 1 256 31 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 498s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 498s l2 regularization: 0.001000 498s Regularization terms: 1, Supporting variables: 0 498s conjugate gradients 498s Total Time: 0.131654 498s 0.000652 498s touch tests/test-pics-basis-noncart 498s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -D -y31 traj.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 7 1 1 1 1 1 31 2 o.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 coils.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 2 5 traj2.ra traj3.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 2 5 ksp.ra ksp1.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -r0.001 -t traj3.ra -Bo.ra ksp1.ra coils.ra reco1.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -r0.001 -t traj2.ra ksp.ra coils.ra reco.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2. reco1.ra reco2.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 0 reco2.ra reco20.ra ;\ 498s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0021 reco.ra reco20.ra ;\ 498s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 498s Basis: [128 128 1 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 498s Max: [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 498s [ 1 256 1 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 498s [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 499s l2 regularization: 0.001000 499s Regularization terms: 1, Supporting variables: 0 499s conjugate gradients 499s Total Time: 0.247109 499s [ 1 256 31 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 499s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 499s l2 regularization: 0.001000 499s Regularization terms: 1, Supporting variables: 0 499s conjugate gradients 499s Total Time: 0.141158 499s 0.001206 499s touch tests/test-pics-basis-noncart-memory 499s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -D -y31 traj.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//delta 16 36 31 p.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac ksp.ra p.ra pk.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 1 256 p.ra p2.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 7 1 1 1 1 1 31 2 o.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 coils.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -r0.001 -t traj2.ra -pp2.ra -Bo.ra pk.ra coils.ra reco.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac -s $(/tmp/autopkgtest.Pon700/autopkgtest_tmp//bitmask 6) reco.ra o.ra reco2.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft traj2.ra reco2.ra k2.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac k2.ra p2.ra pk2.ra ;\ 499s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.003 pk.ra pk2.ra ;\ 499s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 500s Basis: [128 128 1 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 500s Max: [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 500s [ 1 256 31 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 500s [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 500s l2 regularization: 0.001000 500s Regularization terms: 1, Supporting variables: 0 500s conjugate gradients 500s Total Time: 0.749197 501s Done. 501s 0.001659 501s touch tests/test-pics-basis-noncart2 501s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -y55 -m2 -r t.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 13 0 t.ra t0.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 13 1 t.ra t1.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t t0.ra -s8 -k k0.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t t1.ra -s8 -k k1.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//conj k1.ra k1C.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 13 k0.ra k1C.ra k.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -n 8192 k.ra kk.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -S8 s.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//flip 7 s.ra sF.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//conj sF.ra sFC.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 13 s.ra sFC.ra ss.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -t t.ra -M kk.ra ss.ra x.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 13 0 x.ra x0.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 13 1 x.ra x1.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k rk.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//conj rk.ra rkc.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -i 7 rk.ra r0.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -i 7 rkc.ra r1.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 13 r0.ra r1.ra r.ra ;\ 501s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -s -t 0.15 r.ra x.ra ;\ 501s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 503s SMS reconstruction: MB = 2 503s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 2 1 1 ] 503s [128 128 1 8 1 1 1 1 1 1 1 1 1 2 1 1 ] 503s Regularization terms: 0, Supporting variables: 0 503s conjugate gradients 504s Total Time: 0.869864 505s Scaled by: 0.000000-0.000000i 505s 0.147490 505s touch tests/test-pics-noncart-sms 505s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -D -y15 -o2. traj.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj.ra ksp.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -S1 o.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -r0.001 --psf_export=p.ra -t traj.ra ksp.ra o.ra reco1.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S -r0.001 --psf_import=p.ra -t traj.ra ksp.ra o.ra reco2.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.005 reco1.ra reco2.ra ;\ 505s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 505s [ 1 256 15 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 505s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 505s l2 regularization: 0.001000 505s Regularization terms: 1, Supporting variables: 0 505s conjugate gradients 505s Total Time: 0.121883 505s [ 1 256 15 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 505s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 505s l2 regularization: 0.001000 505s Regularization terms: 1, Supporting variables: 0 505s conjugate gradients 505s Total Time: 0.074942 505s 0.001926 505s touch tests/test-pics-psf 505s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s2 x.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 3 x0n.ra k0n.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 128 128 o.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -w1. -i100 -u0.1 -S -RG:3:0:750. k0n.ra o.ra x.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//tgv 750 3 x0n.ra xg.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 15 0 xg.ra xg0.ra ;\ 505s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 xg0.ra x.ra ;\ 505s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 505s Size: 16384 Samples: 16384 Acc: 1.00 505s TGV regularization: 750.000000 505s Regularization terms: 2, Supporting variables: 2 505s ADMM 507s Total Time: 1.164926 508s 0.000000 508s touch tests/test-pics-tgv 508s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 508s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s2 x.ra ;\ 508s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 508s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 508s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 3 x0n.ra k0n.ra ;\ 508s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 128 128 o.ra ;\ 508s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -w1. -i100 -u0.1 -S -RG:3:0:375. -RG:3:0:375. k0n.ra o.ra x.ra ;\ 508s /tmp/autopkgtest.Pon700/autopkgtest_tmp//tgv 750 3 x0n.ra xg.ra ;\ 508s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 15 0 xg.ra xg0.ra ;\ 508s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.01 xg0.ra x.ra ;\ 508s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 508s Size: 16384 Samples: 16384 Acc: 1.00 508s TGV regularization: 375.000000 508s TGV regularization: 375.000000 508s Regularization terms: 4, Supporting variables: 4 508s ADMM 510s Total Time: 1.934802 511s 0.003523 511s touch tests/test-pics-tgv2 511s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 511s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y48 traj.ra ;\ 511s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 511s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 511s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 511s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S --wavelet=dau2 -RW:3:0:0.001 -i150 -e -t traj2.ra ksp.ra o.ra reco.ra ;\ 511s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 511s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.23 reco2.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 511s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 511s [ 1 256 48 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 511s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 512s Maximum eigenvalue: 9.28e+01 512s l1-wavelet regularization: 0.001000 512s Regularization terms: 1, Supporting variables: 0 512s FISTA 512s Total Time: 0.446362 512s 0.226626 512s touch tests/test-pics-wavl1-dau2 512s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 512s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y48 traj.ra ;\ 512s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 512s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 512s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 512s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S --wavelet=cdf44 -RW:3:0:0.001 -i150 -e -t traj2.ra ksp.ra o.ra reco.ra ;\ 512s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 512s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.235 reco2.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 512s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 512s [ 1 256 48 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 512s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 512s Maximum eigenvalue: 9.28e+01 512s l1-wavelet regularization: 0.001000 512s Regularization terms: 1, Supporting variables: 0 512s FISTA 513s Total Time: 0.585709 513s 0.231146 513s touch tests/test-pics-wavl1-cdf44 513s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 513s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x256 -y48 traj.ra ;\ 513s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 513s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 513s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 513s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pics -S --wavelet=haar -RW:3:0:0.001 -i150 -e -t traj2.ra ksp.ra o.ra reco.ra ;\ 513s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 513s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.22 reco2.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 513s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 513s [ 1 256 48 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 513s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 513s Maximum eigenvalue: 9.28e+01 513s l1-wavelet regularization: 0.001000 513s Regularization terms: 1, Supporting variables: 0 513s FISTA 514s Total Time: 0.384707 514s 0.216536 514s touch tests/test-pics-wavl1-haar 514s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 514s /tmp/autopkgtest.Pon700/autopkgtest_tmp//normalize 8 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra coilsnorm.ra ;\ 514s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n 10 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_noise.ra ;\ 514s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pocsense -r0.0 shepplogan_noise.ra coilsnorm.ra reco.ra ;\ 514s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 reco.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 514s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 514s Reconstruction... 514s [Iter 0001] Objective: 0.000000, Error: -1.000000 514s [Iter 0002] Objective: 28.909819, Error: -1.000000 514s [Iter 0003] Objective: 28.909819, Error: -1.000000 514s [Iter 0004] Objective: 28.909819, Error: -1.000000 514s [Iter 0005] Objective: 28.909819, Error: -1.000000 514s [Iter 0006] Objective: 28.909819, Error: -1.000000 514s [Iter 0007] Objective: 28.909819, Error: -1.000000 514s [Iter 0008] Objective: 28.909819, Error: -1.000000 514s [Iter 0009] Objective: 28.909819, Error: -1.000000 514s [Iter 0010] Objective: 28.909819, Error: -1.000000 514s [Iter 0011] Objective: 28.909819, Error: -1.000000 514s [Iter 0012] Objective: 28.909819, Error: -1.000000 514s [Iter 0013] Objective: 28.909819, Error: -1.000000 514s [Iter 0014] Objective: 28.909819, Error: -1.000000 514s [Iter 0015] Objective: 28.909819, Error: -1.000000 514s [Iter 0016] Objective: 28.909819, Error: -1.000000 514s [Iter 0017] Objective: 28.909819, Error: -1.000000 514s [Iter 0018] Objective: 28.909819, Error: -1.000000 514s [Iter 0019] Objective: 28.909819, Error: -1.000000 514s [Iter 0020] Objective: 28.909819, Error: -1.000000 514s [Iter 0021] Objective: 28.909819, Error: -1.000000 514s [Iter 0022] Objective: 28.909819, Error: -1.000000 514s [Iter 0023] Objective: 28.909819, Error: -1.000000 514s [Iter 0024] Objective: 28.909819, Error: -1.000000 514s [Iter 0025] Objective: 28.909819, Error: -1.000000 514s [Iter 0026] Objective: 28.909819, Error: -1.000000 514s [Iter 0027] Objective: 28.909819, Error: -1.000000 514s [Iter 0028] Objective: 28.909819, Error: -1.000000 514s [Iter 0029] Objective: 28.909819, Error: -1.000000 514s [Iter 0030] Objective: 28.909819, Error: -1.000000 514s [Iter 0031] Objective: 28.909819, Error: -1.000000 514s [Iter 0032] Objective: 28.909819, Error: -1.000000 514s [Iter 0033] Objective: 28.909819, Error: -1.000000 514s [Iter 0034] Objective: 28.909819, Error: -1.000000 514s [Iter 0035] Objective: 28.909819, Error: -1.000000 514s [Iter 0036] Objective: 28.909819, Error: -1.000000 514s [Iter 0037] Objective: 28.909819, Error: -1.000000 514s [Iter 0038] Objective: 28.909819, Error: -1.000000 514s [Iter 0039] Objective: 28.909819, Error: -1.000000 514s [Iter 0040] Objective: 28.909819, Error: -1.000000 514s [Iter 0041] Objective: 28.909819, Error: -1.000000 514s [Iter 0042] Objective: 28.909819, Error: -1.000000 514s [Iter 0043] Objective: 28.909819, Error: -1.000000 514s [Iter 0044] Objective: 28.909819, Error: -1.000000 514s [Iter 0045] Objective: 28.909819, Error: -1.000000 514s [Iter 0046] Objective: 28.909819, Error: -1.000000 514s [Iter 0047] Objective: 28.909819, Error: -1.000000 514s [Iter 0048] Objective: 28.909819, Error: -1.000000 514s [Iter 0049] Objective: 28.909819, Error: -1.000000 514s [Iter 0050] Objective: 28.909819, Error: -1.000000 514s Done 514s Done. 514s 0.014795 514s touch tests/test-pocsense-pi 514s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 514s /tmp/autopkgtest.Pon700/autopkgtest_tmp//normalize 8 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra coilsnorm.ra ;\ 514s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n 10 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_noise.ra ;\ 514s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pocsense -r0.01 shepplogan_noise.ra coilsnorm.ra reco.ra ;\ 514s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 reco.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 514s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 514s Reconstruction... 514s [Iter 0001] Objective: 0.000000, Error: -1.000000 514s [Iter 0002] Objective: 28.623583, Error: -1.000000 514s [Iter 0003] Objective: 28.623583, Error: -1.000000 514s [Iter 0004] Objective: 28.623583, Error: -1.000000 514s [Iter 0005] Objective: 28.623583, Error: -1.000000 514s [Iter 0006] Objective: 28.623583, Error: -1.000000 514s [Iter 0007] Objective: 28.623583, Error: -1.000000 514s [Iter 0008] Objective: 28.623583, Error: -1.000000 514s [Iter 0009] Objective: 28.623583, Error: -1.000000 514s [Iter 0010] Objective: 28.623583, Error: -1.000000 514s [Iter 0011] Objective: 28.623583, Error: -1.000000 514s [Iter 0012] Objective: 28.623583, Error: -1.000000 514s [Iter 0013] Objective: 28.623583, Error: -1.000000 514s [Iter 0014] Objective: 28.623583, Error: -1.000000 514s [Iter 0015] Objective: 28.623583, Error: -1.000000 514s [Iter 0016] Objective: 28.623583, Error: -1.000000 514s [Iter 0017] Objective: 28.623583, Error: -1.000000 514s [Iter 0018] Objective: 28.623583, Error: -1.000000 514s [Iter 0019] Objective: 28.623583, Error: -1.000000 514s [Iter 0020] Objective: 28.623583, Error: -1.000000 514s [Iter 0021] Objective: 28.623583, Error: -1.000000 514s [Iter 0022] Objective: 28.623583, Error: -1.000000 514s [Iter 0023] Objective: 28.623583, Error: -1.000000 514s [Iter 0024] Objective: 28.623583, Error: -1.000000 514s [Iter 0025] Objective: 28.623583, Error: -1.000000 514s [Iter 0026] Objective: 28.623583, Error: -1.000000 514s [Iter 0027] Objective: 28.623583, Error: -1.000000 514s [Iter 0028] Objective: 28.623583, Error: -1.000000 514s [Iter 0029] Objective: 28.623583, Error: -1.000000 514s [Iter 0030] Objective: 28.623583, Error: -1.000000 515s [Iter 0031] Objective: 28.623583, Error: -1.000000 515s [Iter 0032] Objective: 28.623583, Error: -1.000000 515s [Iter 0033] Objective: 28.623583, Error: -1.000000 515s [Iter 0034] Objective: 28.623583, Error: -1.000000 515s [Iter 0035] Objective: 28.623583, Error: -1.000000 515s [Iter 0036] Objective: 28.623583, Error: -1.000000 515s [Iter 0037] Objective: 28.623583, Error: -1.000000 515s [Iter 0038] Objective: 28.623583, Error: -1.000000 515s [Iter 0039] Objective: 28.623583, Error: -1.000000 515s [Iter 0040] Objective: 28.623583, Error: -1.000000 515s [Iter 0041] Objective: 28.623583, Error: -1.000000 515s [Iter 0042] Objective: 28.623583, Error: -1.000000 515s [Iter 0043] Objective: 28.623583, Error: -1.000000 515s [Iter 0044] Objective: 28.623583, Error: -1.000000 515s [Iter 0045] Objective: 28.623583, Error: -1.000000 515s [Iter 0046] Objective: 28.623583, Error: -1.000000 515s [Iter 0047] Objective: 28.623583, Error: -1.000000 515s [Iter 0048] Objective: 28.623583, Error: -1.000000 515s [Iter 0049] Objective: 28.623583, Error: -1.000000 515s [Iter 0050] Objective: 28.623583, Error: -1.000000 515s Done 515s Done. 515s 0.017921 515s touch tests/test-pocsense-pi-reg 515s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 515s /tmp/autopkgtest.Pon700/autopkgtest_tmp//normalize 8 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra coilsnorm.ra ;\ 515s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n 10 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_noise.ra ;\ 515s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pocsense -l1 -r0.01 shepplogan_noise.ra coilsnorm.ra reco.ra ;\ 515s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 reco.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 515s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 515s Reconstruction... 515s [Iter 0001] Objective: 0.000000, Error: -1.000000 515s [Iter 0002] Objective: 28.649082, Error: -1.000000 515s [Iter 0003] Objective: 28.649082, Error: -1.000000 515s [Iter 0004] Objective: 28.649082, Error: -1.000000 515s [Iter 0005] Objective: 28.649082, Error: -1.000000 515s [Iter 0006] Objective: 28.649082, Error: -1.000000 515s [Iter 0007] Objective: 28.649082, Error: -1.000000 515s [Iter 0008] Objective: 28.649082, Error: -1.000000 515s [Iter 0009] Objective: 28.649082, Error: -1.000000 515s [Iter 0010] Objective: 28.649082, Error: -1.000000 515s [Iter 0011] Objective: 28.649082, Error: -1.000000 515s [Iter 0012] Objective: 28.649082, Error: -1.000000 515s [Iter 0013] Objective: 28.649082, Error: -1.000000 515s [Iter 0014] Objective: 28.649082, Error: -1.000000 515s [Iter 0015] Objective: 28.649082, Error: -1.000000 515s [Iter 0016] Objective: 28.649082, Error: -1.000000 515s [Iter 0017] Objective: 28.649082, Error: -1.000000 515s [Iter 0018] Objective: 28.649082, Error: -1.000000 515s [Iter 0019] Objective: 28.649082, Error: -1.000000 515s [Iter 0020] Objective: 28.649082, Error: -1.000000 515s [Iter 0021] Objective: 28.649082, Error: -1.000000 515s [Iter 0022] Objective: 28.649082, Error: -1.000000 515s [Iter 0023] Objective: 28.649082, Error: -1.000000 515s [Iter 0024] Objective: 28.649082, Error: -1.000000 515s [Iter 0025] Objective: 28.649082, Error: -1.000000 515s [Iter 0026] Objective: 28.649082, Error: -1.000000 515s [Iter 0027] Objective: 28.649082, Error: -1.000000 515s [Iter 0028] Objective: 28.649082, Error: -1.000000 515s [Iter 0029] Objective: 28.649082, Error: -1.000000 515s [Iter 0030] Objective: 28.649082, Error: -1.000000 515s [Iter 0031] Objective: 28.649082, Error: -1.000000 515s [Iter 0032] Objective: 28.649082, Error: -1.000000 515s [Iter 0033] Objective: 28.649082, Error: -1.000000 515s [Iter 0034] Objective: 28.649082, Error: -1.000000 515s [Iter 0035] Objective: 28.649082, Error: -1.000000 515s [Iter 0036] Objective: 28.649082, Error: -1.000000 515s [Iter 0037] Objective: 28.649082, Error: -1.000000 515s [Iter 0038] Objective: 28.649082, Error: -1.000000 515s [Iter 0039] Objective: 28.649082, Error: -1.000000 515s [Iter 0040] Objective: 28.649082, Error: -1.000000 515s [Iter 0041] Objective: 28.649082, Error: -1.000000 516s [Iter 0042] Objective: 28.649082, Error: -1.000000 516s [Iter 0043] Objective: 28.649082, Error: -1.000000 516s [Iter 0044] Objective: 28.649082, Error: -1.000000 516s [Iter 0045] Objective: 28.649082, Error: -1.000000 516s [Iter 0046] Objective: 28.649082, Error: -1.000000 516s [Iter 0047] Objective: 28.649082, Error: -1.000000 516s [Iter 0048] Objective: 28.649082, Error: -1.000000 516s [Iter 0049] Objective: 28.649082, Error: -1.000000 516s [Iter 0050] Objective: 28.649082, Error: -1.000000 516s Done 516s Done. 516s 0.028680 516s touch tests/test-pocsense-pi-wl 516s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//index 1 6282 i0.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.001 i0.ra i1.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zexp -i i1.ra i2.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//creal i2.ra i2r.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1.i i2.ra ii2.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//creal ii2.ra i2i.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 6282 o.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy 1. o.ra i2r.ra i3r.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy 1. o.ra i2i.ra i3i.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 i3r.ra i3i.ra i3.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 50. i3.ra i4.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pol2mask i4.ra i5.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -c -x100 r.ra ;\ 516s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 r.ra i5.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 517s 0.046557 517s touch tests/test-pol2mask 517s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//index 1 6 i1.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zexp -i i1.ra i2.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//creal i2.ra i2r.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1.i i2.ra ii2.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//creal ii2.ra i2i.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 6 o.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy 25. o.ra i2r.ra i3r.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy 25. o.ra i2i.ra i3i.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 0 i3r.ra i3i.ra i3.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//pol2mask -X50 -Y50 i3.ra i5.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 1 o.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 50 1 50 o.ra r.ra ;\ 517s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. r.ra i5.ra ;\ 517s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 518s 0.000000 518s touch tests/test-pol2mask2 518s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 128 ones.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//poly 128 0 1 poly.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. ones.ra poly.ra ;\ 518s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 518s 0.000000 518s touch tests/test-poly 518s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom x.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 7 256 1 64 x.ra x2.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 1 5 x2.ra x3.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 5 128 128 x3.ra x4.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 1 2 x4.ra x5.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 7 128 128 1 x5.ra x6.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. x.ra x6.ra ;\ 518s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 518s 0.000000 518s touch tests/test-reshape 518s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s2 x.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rof 700. 3 x0n.ra xr.ra ;\ 518s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.028 x0.ra xr.ra ;\ 518s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 519s 0.027661 519s touch tests/test-rof 519s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 3 100 100 3 z.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s1 -n1. z.ra n.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 50 50 1 oy.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 oy.ra oy2.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//roistat -b -D oy2.ra n.ra dy.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 50 1 50 n.ra ny2.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//std 3 ny2.ra dy2.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. dy2.ra dy.ra ;\ 519s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 519s 0.000000 519s touch tests/test-roistat-std 519s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 3 100 100 3 z.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s1 -n1. z.ra n.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 50 50 1 oy.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 oy.ra oy2.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//roistat -b -V oy2.ra n.ra dy.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 50 1 50 n.ra ny2.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//var 3 ny2.ra dy2.ra ;\ 519s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0000001 dy2.ra dy.ra ;\ 519s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 520s 0.000000 520s touch tests/test-roistat-var 520s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 3 100 100 3 z.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s1 -n1. z.ra n.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 50 50 1 oy.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 oy.ra oy2.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 70 70 1 ox.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 ox.ra ox2.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//roistat -b -D oy2.ra n.ra dy.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//roistat -b -D ox2.ra n.ra dx.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 4 dy.ra dx.ra d2.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 4 oy2.ra ox2.ra o2.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//roistat -b -D o2.ra n.ra d.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. d2.ra d.ra ;\ 520s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 520s 0.000000 520s touch tests/test-roistat-mult 520s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 100 100 1 o.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//index 2 3 i.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac o.ra i.ra oi.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s1 -n0.1 oi.ra n.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 50 50 1 oy.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 oy.ra oy2.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//roistat -M oy2.ra n.ra dy.ra ;\ 520s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.006 i.ra dy.ra ;\ 520s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 521s 0.003319 521s touch tests/test-roistat-mean 521s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 521s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x128 -y21 -t5 traj.ra ;\ 521s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 521s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 521s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a traj.ra ksp.ra I.ra ;\ 521s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rtnlinv -N -S -i9 -t traj2.ra ksp.ra r.ra c.ra ;\ 521s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 64 1 64 c.ra c2.ra ;\ 521s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac r.ra c2.ra x.ra ;\ 521s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft traj2.ra x.ra k2.ra ;\ 521s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 ksp.ra k2.ra ;\ 521s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 523s Est. image size: 128x128x1 523s Done. 523s [ 0 0 0 ] 531s Done. 531s 0.022655 531s touch tests/test-rtnlinv 531s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x128 -y21 -t5 traj.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 1 128 21 o.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 10 5 o.ra o2.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a traj.ra o2.ra psf.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a traj.ra ksp.ra _adj.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 2 _adj.ra adj.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 psf.ra mtf.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 7 adj.ra ksp2.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 4. mtf.ra mtf2.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rtnlinv -w1. -N -i9 -p mtf2.ra ksp2.ra r1.ra c1.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rtnlinv -w1. -N -i9 -t traj2.ra ksp.ra r2.ra c2.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 r2.ra r1.ra ;\ 531s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 c2.ra c1.ra ;\ 531s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 533s Est. image size: 128x128x1 533s Done. 533s Est. image size: 128x128x1 533s Done. 534s [ 0 0 0 ] 536s 0.000000 536s 0.000000 536s touch tests/test-rtnlinv-precomp 536s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 536s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -r -x128 -y21 traj.ra ;\ 536s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 536s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 536s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -w1. -N -i9 -t traj2.ra ksp.ra r1.ra c1.ra ;\ 536s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rtnlinv -w1. -N -i9 -t traj2.ra ksp.ra r2.ra c2.ra ;\ 536s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 r2.ra r1.ra ;\ 536s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 c2.ra c1.ra ;\ 536s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 536s Est. image size: 64 64 1 536s Scaling: 1.000000 537s [ 0 0 0 ] 537s 0.000000 537s 0.000000 537s touch tests/test-rtnlinv-nlinv-noncart 537s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 537s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s8 -k -x 128 ksp.ra ;\ 537s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 128 128 psf.ra ;\ 537s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nlinv -w1. -N -i9 -f1. -n ksp.ra r1.ra c1.ra ;\ 537s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rtnlinv -w1. -N -i9 -f1. -p psf.ra ksp.ra r2.ra c2.ra ;\ 537s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. r2.ra r1.ra ;\ 537s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. c2.ra c1.ra ;\ 537s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 539s Scaling: 1.000000 540s 0.000000 540s 0.000000 540s touch tests/test-rtnlinv-nlinv-pseudocart 540s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n1000 -1 3:3:1 -2 1:1:1 ref.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n500 --av-spokes 2 -1 3:3:1 -2 1:1:1 signal.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 0 ref.ra ref1.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 1 ref.ra ref2.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 5 ref1.ra ref2.ra comb.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 0 signal.ra s.ra;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 500 ref.ra ref1.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 501 ref.ra ref2.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 5 ref1.ra ref2.ra comb.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 250 signal.ra s.ra;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 998 ref.ra ref1.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 999 ref.ra ref2.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 5 ref1.ra ref2.ra comb.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 499 signal.ra s.ra;\ 540s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 540s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 540s Spoke Averaging: 1 540s Spoke Averaging: 2 540s 0.000000 541s 0.000000 541s 0.000000 541s touch tests/test-signal-spoke-averaging-2 541s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n999 -1 3:3:1 -2 1:1:1 ref.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n333 --av-spokes 3 -1 3:3:1 -2 1:1:1 signal.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 0 ref.ra ref1.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 1 ref.ra ref2.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 2 ref.ra ref3.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 5 ref1.ra ref2.ra ref3.ra comb.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 0 signal.ra s.ra;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 501 ref.ra ref1.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 502 ref.ra ref2.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 503 ref.ra ref3.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 5 ref1.ra ref2.ra ref3.ra comb.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 167 signal.ra s.ra;\ 541s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 541s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 541s Spoke Averaging: 1 541s Spoke Averaging: 3 542s 0.000000 542s 0.000000 542s touch tests/test-signal-spoke-averaging-3 542s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 _simu.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs _simu.ra _simu_abs.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//mip 32 _simu_abs.ra max.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//spow -- -1 max.ra scale.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac _simu.ra scale.ra _simu2.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1i _simu2.ra simu.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n1000 -1 3:3:1 -2 1:1:1 signal.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.003 simu.ra signal.ra ;\ 542s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 542s 0.000412 542s Spoke Averaging: 1 542s 0.002549 542s touch tests/test-sim-to-signal-irflash 542s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 _simu.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs _simu.ra _simu_abs.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//mip 32 _simu_abs.ra max.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//spow -- -1 max.ra scale.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac _simu.ra scale.ra _simu2.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1i _simu2.ra simu.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -F -r0.0041 -e0.00258 -f8 -n1000 -1 3:3:1 -2 1:1:1 signal.ra ;\ 542s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.003 simu.ra signal.ra ;\ 542s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 542s 0.000412 543s Spoke Averaging: 1 543s 0.002107 543s touch tests/test-sim-to-signal-flash 543s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 _sim.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1i _sim.ra sim.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -I -B -r0.0045 -e0.00225 -f45 -n1000 -1 3:3:1 -2 1:1:1 signal.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.003 sim.ra signal.ra ;\ 543s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 543s 0.000726 543s Spoke Averaging: 1 543s 0.002074 543s touch tests/test-sim-to-signal-irbSSFP 543s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 ref.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4,av-spokes=3 -1 3:3:1 -2 1:1:1 signal.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 0 ref.ra ref1.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 1 ref.ra ref2.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 2 ref.ra ref3.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 5 ref1.ra ref2.ra ref3.ra comb.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 0 signal.ra s.ra;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 501 ref.ra ref1.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 502 ref.ra ref2.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 503 ref.ra ref3.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 5 ref1.ra ref2.ra ref3.ra comb.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 5 167 signal.ra s.ra;\ 543s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 543s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 543s 0.000614 543s 0.001646 543s 0.000000 544s 0.000000 544s touch tests/test-sim-spoke-averaging-3 544s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 544s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4,av-spokes=3 -1 3:3:1 -2 1:1:1 _sim.ra ;\ 544s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1i _sim.ra sim.ra ;\ 544s /tmp/autopkgtest.Pon700/autopkgtest_tmp//signal -I -B -r0.0045 -e0.00225 -f45 -n1000 -1 3:3:1 -2 1:1:1 --av-spokes 3 signal.ra ;\ 544s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.001 sim.ra signal.ra ;\ 544s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 544s 0.001528 544s Spoke Averaging: 3 544s 0.000844 544s touch tests/test-sim-to-signal-irbSSFP-averaged-spokes 544s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 544s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.020,sl-grad=0.01,Nspins=41 -1 3:3:1 -2 1:1:1 sim.ra ;\ 544s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.020,sl-grad=0.01,Nspins=61 -1 3:3:1 -2 1:1:1 sim2.ra ;\ 544s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.01 sim.ra sim2.ra ;\ 544s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 547s 3.000172 552s 4.447847 552s 0.008268 552s touch tests/test-sim-slice-profile-spins 552s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 552s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.040,sl-grad=0.01,Nspins=41 -1 3:3:1 -2 1:1:1 sim.ra ;\ 552s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.020,sl-grad=0.01,Nspins=41 -1 3:3:1 -2 1:1:1 sim2.ra ;\ 552s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.02 sim.ra sim2.ra ;\ 552s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 557s 5.087324 560s 2.944256 560s 0.016989 560s touch tests/test-sim-slice-profile-slicethickness 560s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 560s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.040,sl-grad=0.01,Nspins=41 -1 3:3:1 -2 1:1:1 sim.ra ;\ 560s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.020,sl-grad=0.01,Nspins=31 -1 3:3:1 -2 1:1:1 sim2.ra ;\ 560s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.02 sim.ra sim2.ra ;\ 560s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 565s 5.160470 567s 2.347835 568s 0.018749 568s touch tests/test-sim-slice-profile-density 568s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 568s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.041,sl-grad=0,Nspins=41 -1 3:3:1 -2 1:1:1 sim.ra ;\ 568s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,sl-grad=0 -1 3:3:1 -2 1:1:1 sim2.ra ;\ 568s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 41 sim2.ra sim3.ra ;\ 568s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.02 sim.ra sim3.ra ;\ 568s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 569s 1.121141 569s 0.027045 569s 0.000000 569s touch tests/test-sim-slice-profile-density2 569s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0.0001,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_hp.ra ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0006 simu_hp.ra simu_ode.ra ;\ 569s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 569s 0.026618 569s 0.000413 569s 0.000312 569s touch tests/test-sim-ode-hp-irflash 569s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0.0001,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_hp.ra ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0006 simu_hp.ra simu_ode.ra ;\ 569s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 569s 0.027093 569s 0.000450 569s 0.000367 569s touch tests/test-sim-ode-hp-flash 569s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.0001,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_hp.ra ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00015 simu_hp.ra simu_ode.ra ;\ 569s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 569s 0.000630 569s 0.000593 569s 0.000000 569s touch tests/test-sim-ode-hp-irbssfp 569s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.0001,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_hp.ra ;\ 569s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00015 simu_hp.ra simu_ode.ra ;\ 569s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 569s 0.000626 570s 0.000662 570s 0.000000 570s touch tests/test-sim-ode-hp-bssfp 570s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,ipl=0.0001,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:4 -2 1:1:5 simu.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 0 7 0 simu.ra slice1.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 6 3 7 4 simu.ra slice2.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 slice1.ra slice2.ra ;\ 570s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 570s 0.010932 570s 0.000000 570s touch tests/test-sim-multi-relaxation 570s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.01,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --STM --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.01,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.003 simu_stm.ra simu_ode.ra ;\ 570s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 570s 0.027958 570s 0.001995 570s 0.001736 570s touch tests/test-sim-ode-stm-bssfp 570s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.01,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --STM --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.01,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.003 simu_stm.ra simu_ode.ra ;\ 570s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 570s 0.027527 570s 0.002008 570s 0.001472 570s touch tests/test-sim-ode-stm-irbssfp 570s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --STM --seq FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.001 simu_stm.ra simu_ode.ra ;\ 570s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 570s 0.017189 570s 0.001373 570s 0.000207 570s touch tests/test-sim-ode-stm-flash 570s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --STM --seq IR-FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 570s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.001 simu_stm.ra simu_ode.ra ;\ 570s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 570s 0.016572 571s 0.001381 571s 0.000206 571s touch tests/test-sim-ode-stm-irflash 571s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=50,pinv,ipl=0.01,ppl=0.00225,Trf=0.0001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ROT --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=50,pinv,ipl=0.01,ppl=0.00225,Trf=0.0001,FA=45,BWTP=4 --other sampling-rate=10E5 -1 3:3:1 -2 1:1:1 simu_rot.ra ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.003 simu_rot.ra simu_ode.ra ;\ 571s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 571s 0.001640 571s 0.001123 571s 0.000144 571s touch tests/test-sim-ode-rot-bssfp 571s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=50,pinv,ipl=0.01,ppl=0.00225,Trf=0.0001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ROT --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=50,pinv,ipl=0.01,ppl=0.00225,Trf=0.0001,FA=45,BWTP=4 --other sampling-rate=10E5 -1 3:3:1 -2 1:1:1 simu_rot.ra ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.003 simu_rot.ra simu_ode.ra ;\ 571s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 571s 0.001588 571s 0.001095 571s 0.000288 571s touch tests/test-sim-ode-rot-irbssfp 571s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ROT --seq FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=8,BWTP=4 --other sampling-rate=10E5 -1 3:3:1 -2 1:1:1 simu_rot.ra ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.006 simu_rot.ra simu_ode.ra ;\ 571s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 571s 0.021672 571s 0.160065 571s 0.005577 571s touch tests/test-sim-ode-rot-flash 571s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ROT --seq IR-FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=8,BWTP=4 --other sampling-rate=10E5 -1 3:3:1 -2 1:1:1 simu_rot.ra ;\ 571s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.01 simu_rot.ra simu_ode.ra ;\ 571s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 571s 0.021907 572s 0.150586 572s 0.009640 572s touch tests/test-sim-ode-rot-irflash 572s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=10,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 mxy.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=10,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 --split-dim -1 3:3:1 -2 1:1:1 sim.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 0 0 sim.ra x.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 0 1 sim.ra y.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- 1i y.ra x.ra mxy2.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.002 mxy.ra mxy2.ra ;\ 572s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 572s 0.000373 572s 0.000356 572s 0.000000 572s touch tests/test-sim-split-dim-mag 572s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=10,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 mxy.ra dxy.ra;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=10,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 --split-dim -1 3:3:1 -2 1:1:1 sim.ra deriv.ra;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 0 0 deriv.ra x.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 0 1 deriv.ra y.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- 1i y.ra x.ra d.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.002 dxy.ra d.ra ;\ 572s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 572s 0.000374 572s 0.000354 572s 0.000000 572s touch tests/test-sim-split-dim-deriv 572s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq FLASH,TR=0.001,TE=0.001,Nrep=100,pinv,ipl=0,ppl=0,Trf=0.001,FA=180,BWTP=1,isp=0,slice-thickness=0.040,sl-grad=0.001 --split-dim -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --STM --seq FLASH,TR=0.001,TE=0.001,Nrep=100,pinv,ipl=0,ppl=0,Trf=0.001,FA=180,BWTP=1,isp=0,slice-thickness=0.040,sl-grad=0.001 --split-dim -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.001 simu_stm.ra simu_ode.ra ;\ 572s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s 0.006925 572s 0.001246 572s WARN: Slice-Selection Gradient rewinder does not fit between RF_end and TE! 572s 0.000215 572s touch tests/test-sim-ode-stm-flash-te-eq-trf-eq-tr 572s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s.ra d.ra;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 4 0 d.ra d_r1.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3.003:3.003:1 -2 1:1:1 --other ode-tol=1E-6 s2.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- -1 s.ra s2.ra diff.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 333 diff.ra g.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -9 g.ra g2.ra ;\ 572s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.012 d_r1.ra g2.ra ;\ 572s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 573s 0.040948 573s 0.042744 573s 0.011038 573s touch tests/test-sim-ode-deriv-r1 573s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s.ra d.ra;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 4 2 d.ra d_r2.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1.01:1.01:1 --other ode-tol=1E-6 s2.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- -1 s.ra s2.ra diff.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 100 diff.ra g.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- -1 g.ra g2.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.01 d_r2.ra g2.ra ;\ 573s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 573s 0.059498 573s 0.042111 573s 0.007834 573s touch tests/test-sim-ode-deriv-r2 573s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s.ra d.ra;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 4 3 d.ra d_b1.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45.1,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s2.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy -- -1 s.ra s2.ra diff.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 10 diff.ra g.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 45 g.ra g2.ra ;\ 573s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.01 d_b1.ra g2.ra ;\ 573s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 574s 0.040442 574s 0.040684 574s 0.008870 574s touch tests/test-sim-ode-deriv-b1 574s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s.ra d.ra;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//sim --STM --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1.01:1.01:1 --other ode-tol=1E-6 s2.ra d2.ra ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.005 d.ra d2.ra ;\ 574s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 574s 0.041496 574s 0.002125 574s 0.002385 574s touch tests/test-sim-ode-stm-deriv 574s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 1 1 o.ra ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 o.ra o0.ra ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 1 50 o0.ra o1.ra ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 0 50 o1.ra o2.ra ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o2.ra o.ra ;\ 574s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 574s 0.000000 574s touch tests/test-slice 574s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 1 1 1 o.ra ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 100 1 100 2 100 o.ra o0.ra ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 0 50 1 50 2 50 o0.ra o1.ra ;\ 574s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o1.ra o.ra ;\ 574s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 575s 0.000000 575s touch tests/test-slice-multidim 575s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 6 1 2 1 3 1 4 a0.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 2 3 4 b0.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise a0.ra a1.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise b0.ra b1.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze a1.ra a2.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. b1.ra a2.ra ;\ 575s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 575s 0.000000 575s touch tests/test-squeeze 575s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x128 -y50 -G -D t.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t t.ra -s8 k.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 1 1 k.ra k1.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze k1.ra kx.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//svd kx.ra u.ra s.ra vh.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ssa -w1 -m0 -n0 kx.ra eof.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs u.ra uabs.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs eof.ra eofabs.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 1 4 uabs.ra utest.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 1 4 eofabs.ra eoftest.ra ;\ 575s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.00001 utest.ra eoftest.ra ;\ 575s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 576s Performing SSA-FARY 576s 0.000004 576s touch tests/test-ssa-pca 576s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x128 -y50 -G -D t.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -t t.ra -s8 k.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 1 1 k.ra k1.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze k1.ra kx.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 59 kx.ra kx1.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//casorati 0 10 1 8 kx1.ra kcas.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//svd kcas.ra u.ra s.ra vh.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ssa -w10 -m0 -n0 kx.ra eof.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs u.ra uabs.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs eof.ra eofabs.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 1 10 uabs.ra utest.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize 1 10 eofabs.ra eoftest.ra ;\ 576s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000015 utest.ra eoftest.ra ;\ 576s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 578s Performing SSA-FARY 578s 0.000011 578s touch tests/test-ssa 578s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -m -x12 -s8 ph.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 1067 1 1 1152 1 32 ph.ra phc.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//repmat 11 5 phc.ra phc1.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//reshape 3072 160 1 phc1.ra phc2.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze phc2.ra phc10.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 0 1 phc10.ra phc3.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n1e8 phc3.ra ph_noise.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ssa -w33 -m0 -z -n0 phc3.ra eof.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ssa -w33 -m0 -z -n0 -r10 ph_noise.ra eof2.ra s.ra back.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.4 phc3.ra back.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ssa -w33 -m0 -z -n0 -r5 phc3.ra eof3.ra tmp.ra tmp1.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ssa -w33 -m0 -z -n0 -r5 tmp1.ra eof4.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 0 4 eof3.ra eofex.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs eofex.ra eofex1.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//extract 1 0 4 eof4.ra eof4ex.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//cabs eof4ex.ra eof4ex1.ra ;\ 578s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.05 eofex1.ra eof4ex1.ra ;\ 578s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 578s Performing SSA-FARY 580s Performing SSA 584s 0.385882 584s Performing SSA 588s Performing SSA-FARY 589s 0.010206 589s touch tests/test-ssa-backprojection 589s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 589s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -s2 x.ra ;\ 589s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 589s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 589s /tmp/autopkgtest.Pon700/autopkgtest_tmp//tgv 650. 3 x0n.ra xd.ra ;\ 589s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 15 0 xd.ra xd0.ra ;\ 589s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.024 x0.ra xd0.ra ;\ 589s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 590s 0.023596 590s touch tests/test-tgv 590s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 590s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x32 -3 -s2 x.ra ;\ 590s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 590s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 590s /tmp/autopkgtest.Pon700/autopkgtest_tmp//tgv 650. 7 x0n.ra xd.ra ;\ 590s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 15 0 xd.ra xd0.ra ;\ 590s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.02 x0.ra xd0.ra ;\ 590s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 593s 0.019533 593s touch tests/test-tgv-3D 593s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 593s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x128 -y71 -r traja.ra ;\ 593s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x64 -y71 -o2. -r trajb.ra ;\ 593s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 0.5 traja.ra traja2.ra ;\ 593s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0000001 traja2.ra trajb.ra ;\ 593s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 594s 0.000000 594s touch tests/test-traj-over 594s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x128 -y71 -r -c traja.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x128 -y71 -q-0.5:-0.5:0. -r trajb.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0000001 traja.ra trajb.ra ;\ 594s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 594s 0.000000 594s touch tests/test-traj-dccen 594s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x64 -y71 -r -c -o2. traja.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x64 -y71 -q-0.5:-0.5:0. -r -o2. trajb.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0000001 traja.ra trajb.ra ;\ 594s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 594s 0.000000 594s touch tests/test-traj-dccen-over 594s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x128 -y128 -r traja.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//poly 128 1 0 0.0245436926 angle.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -x128 -y128 -r -C angle.ra trajb.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 traja.ra trajb.ra ;\ 594s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 594s Custom-angle file is used. 594s 0.000000 594s touch tests/test-traj-custom 594s set -e ; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -R0. -r -y360 -D t0.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t0.ra k0.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -R30. -r -y360 -D t30.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t30.ra k30.ra ;\ 594s /tmp/autopkgtest.Pon700/autopkgtest_tmp//estshift 4 k0.ra k30.ra | grep "30.00000" ;\ 594s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 595s Shifts: 30.000000 595s touch tests/test-traj-rot 595s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -3 -x128 -y128 -r traj.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 3 1 1 128 o.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 63.5 o.ra a.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 1 0 traj.ra t.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//rss 1 t.ra b.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0000001 b.ra a.ra ;\ 595s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 595s 0.000000 595s touch tests/test-traj-3D 595s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//traj -y16 -x16 -a2 t.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nufft -a -t t.ra k.ra x.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//upat -Y16 -Z16 -z2 u.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze u.ra u2.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//phantom -x16 -k k2.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac k2.ra u2.ra ku.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u -i 7 ku.ra x2.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.06 x.ra x2.ra ;\ 595s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 595s Est. image size: 16x16x1 595s Done. 595s 0.053907 595s touch tests/test-upat-traj 595s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 2 o.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//vec 1. 1.0+0.0i v.ra ;\ 595s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o.ra v.ra ;\ 595s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 596s 0.000000 596s touch tests/test-vec 596s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 2 o1.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale 1.i o1.ra o.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//vec 1.i 0.0+1.0i v.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. o.ra v.ra ;\ 596s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 596s 0.000000 596s touch tests/test-vec-imag 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//version -t `cat /tmp/autopkgtest.Pon700/autopkgtest_tmp//version.txt` 596s touch tests/test-version 596s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavepsf -x 640 -y 128 wave_psf.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -iu 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra img.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 640 img.ra wave_zpad.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 1 wave_zpad.ra wave_hyb.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac wave_hyb.ra wave_psf.ra wave_acq.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 6 wave_acq.ra wave_ksp.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wave /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra wave_psf.ra wave_ksp.ra reco.ra ;\ 596s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.23 -s reco.ra /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 596s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 596s Loading data... Done. 596s FFTMOD maps and kspc... Done. 596s Estimating sampling mask... Done. 596s Creating linear operators: 596s E: 0.000761 seconds. 596s R: 0.000002 seconds. 596s Fx: 0.000841 seconds. 596s W: 0.000481 seconds. 596s Fyz: 0.000567 seconds. 596s M: 0.000432 seconds. 596s Forward linear operator information: 596s Domain: [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 596s Codomain: [640 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 597s Max eval: 2.73e+15 597s Normalizing kspace... Done. 597s Using CG. 597s Maximum iterations: 300 597s Tolerance: 1.00e-03 597s Reconstruction... Done. 597s Reconstruction time: 0.289451 seconds. 597s Cleaning up and saving result... Done. 597s Total time: 0.923025 seconds. 597s Scaled by: 1349276032.000000-12332.097656i 597s 0.223089 597s touch tests/test-wave 597s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet 3 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra w.ra ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet -a 3 128 128 w.ra a.ra ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra a.ra ;\ 597s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 597s 0.000000 597s touch tests/test-wavelet 597s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 1 one.ra ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 2 100 one.ra one2.ra ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft 4 one3.ra ph.ra ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet 3 ph2.ra w.ra ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet -a 3 128 128 w.ra a.ra ;\ 597s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 ph2.ra a.ra ;\ 597s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 598s 0.000000 598s touch tests/test-wavelet-batch 598s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 1 one.ra ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 2 100 one.ra one2.ra ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft 4 one3.ra ph.ra ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet 3 ph2.ra w.ra ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 2 80 w.ra w1.ra ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//slice 2 80 ph2.ra ph1.ra ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet 3 ph1.ra a.ra ;\ 598s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. w1.ra a.ra ;\ 598s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 599s 0.000000 599s touch tests/test-wavelet-batch1 599s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 599s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 1 one.ra ;\ 599s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 2 100 one.ra one2.ra ;\ 599s /tmp/autopkgtest.Pon700/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 599s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft 4 one3.ra ph.ra ;\ 599s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 599s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 0 2 ph2.ra ph3.ra ;\ 599s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet 6 ph3.ra w.ra ;\ 599s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet -a 6 128 128 w.ra a.ra ;\ 599s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 ph3.ra a.ra ;\ 599s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 599s 0.000000 600s touch tests/test-wavelet-batch2 600s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 1 one.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 2 100 one.ra one2.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft 4 one3.ra ph.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 1 2 ph2.ra ph3.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet 5 ph3.ra w.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet -a 5 128 128 w.ra a.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 ph3.ra a.ra ;\ 600s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 600s 0.000000 600s touch tests/test-wavelet-batch3 600s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 1 one.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 2 5 3 5 4 5 one.ra one2.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft 28 one3.ra ph.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 0 3 ph2.ra ph3.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet 10 ph3.ra w.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet -a 10 128 128 w.ra a.ra ;\ 600s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 ph3.ra a.ra ;\ 600s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 601s 0.000000 601s touch tests/test-wavelet-batch4 601s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet -H 3 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra w.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet -H -a 3 128 128 w.ra a.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra a.ra ;\ 601s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 601s 0.000000 601s touch tests/test-wavelet-haar 601s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet -C 3 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra w.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavelet -C -a 3 128 128 w.ra a.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra a.ra ;\ 601s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 601s 0.000000 601s touch tests/test-wavelet-cdf44 601s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 1 4096 z.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s 1 -n 1 z.ra n1.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s 2 -n 2 z.ra n2.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s 3 -n 3 z.ra n3.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 3 n1.ra n2.ra n3.ra n.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 1 4096 o.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s 1 -n 1 o.ra s1.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s 2 -n 2 o.ra s2.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s 3 -n 3 o.ra s3.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 3 s1.ra s2.ra s3.ra s.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//whiten s.ra n.ra w.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//std 7 w.ra d.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 4 1 1 1 3 o.ra ;\ 601s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.0002 d.ra o.ra ;\ 601s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 602s 0.000040 602s touch tests/test-whiten 602s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wavepsf -x 640 -y 128 wave_psf.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -iu 7 /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra img.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//resize -c 0 640 img.ra wave_zpad.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 1 wave_zpad.ra wave_hyb.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac wave_hyb.ra wave_psf.ra wave_acq.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fft -u 6 wave_acq.ra wave_ksp.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//transpose 1 3 wave_ksp.ra permuted.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//squeeze permuted.ra table.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//poly 128 1 0 1 ky.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//poly 128 1 0 0 kz.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//poly 128 1 0 0 te.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//join 1 ky.ra kz.ra te.ra reorder.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//poly 1 0 1 phi.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//wshfl /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//coils.ra wave_psf.ra phi.ra reorder.ra table.ra reco.ra ;\ 602s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.23 -s /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/out//shepplogan.ra reco.ra ;\ 602s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 603s Loading data... Done. 603s Constructing sampling mask from reorder table... Done. 603s Constructing sampling-temporal kernel... Done. 603s Creating single channel linear operators: 603s R: 0.000014 seconds. 603s Fx: 0.000958 seconds. 603s W: 0.000514 seconds. 603s Fyz: 0.000066 seconds. 603s K: 0.000001 seconds. 603s Single channel forward operator information: 603s Domain: [ 128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1] 603s Codomain: [ 640 1 128 1 1 1 1 1 1 1 1 1 1 1 1 1] 603s Overall forward linear operator information: 603s Domain: [ 128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1] 603s Codomain: [ 640 8 128 1 1 1 1 1 1 1 1 1 1 1 1 1] 603s Normalizing data table and applying fftmod to table and maps... Done. 603s Preparing reconstruction operator: Algorithm: ADMM 603s . Rho: 1.00e+00 603s .ADMM 605s Reconstruction... Done. 605s Reconstruction time: 1.563059 seconds. 605s Cleaning up and saving result... Done. 605s Total time: 1.608441 seconds. 605s Scaled by: 0.000026+0.000000i 605s 0.223099 605s touch tests/test-wshfl 605s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 5 5 a.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zexp a.ra b.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//ones 2 5 5 c.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0. c.ra b.ra ;\ 605s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 605s 0.000000 605s touch tests/test-zexp 605s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 5 5 a.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s1 a.ra a1.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s2 a.ra a2.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//saxpy 1. a1.ra a2.ra as.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zexp a1.ra b1.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zexp a2.ra b2.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zexp as.ra bs.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//fmac b1.ra b2.ra bs2.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 bs.ra bs2.ra ;\ 605s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 605s 0.000000 605s touch tests/test-zexp2 605s set -e; mkdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zeros 2 5 5 a.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//noise -s1 a.ra a1.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//scale -- 1.i a1.ra a2.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zexp a2.ra b1.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//zexp -i a1.ra b2.ra ;\ 605s /tmp/autopkgtest.Pon700/autopkgtest_tmp//nrmse -t 0.000001 b1.ra b2.ra ;\ 605s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.Pon700/autopkgtest_tmp/tests/tmp/$$/ 606s 0.000000 606s touch tests/test-zexp-imag 606s autopkgtest [12:54:14]: test suite: -----------------------] 606s autopkgtest [12:54:14]: test suite: - - - - - - - - - - results - - - - - - - - - - 606s suite PASS 606s autopkgtest [12:54:14]: @@@@@@@@@@@@@@@@@@@@ summary 606s command1 PASS (superficial) 606s suite PASS 621s Creating nova instance adt-noble-amd64-bart-cuda-20240321-124408-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-amd64-server-20240320.img (UUID 3219a3f4-90ea-47d9-8dfb-3912f2ae9f95)...